0.028927 0.000000 0.008602 0.000000 0.014032 0.000000 0.000000 0.000000 0.019106 0.00000 0.00000 0.00000 Buckler, D.R. Zhou, Y. Stock, A.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 106.56 90.00 34.570 71.267 54.605 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C N S -1 58.082 THIOCYANATE ION non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 10 153 164 10.1016/S0969-2126(01)00706-7 11839301 Evidence of intradomain and interdomain flexibility in an OmpR/PhoB homolog from Thermotoga maritima. 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 parabolic collimating mirror CCD 2001-04-13 ADSC QUANTUM 4 double-crystal MAD M x-ray 1 0.9640 1.0 0.9796 1.0 0.9797 1.0 X8C NSLS 0.9640, 0.9796, 0.9797 SYNCHROTRON NSLS BEAMLINE X8C 26478.363 DNA BINDING RESPONSE REGULATOR D 1 man polymer 58.082 THIOCYANATE ION 6 syn non-polymer 18.015 water 206 nat water DRRD no yes (MSE)NVRVLVVEDERDLADLITEALKKE(MSE)FTVDVCYDGEEG(MSE)Y(MSE)ALNEPFDVVILDI(MSE)LPVHD GWEILKS(MSE)RESGVNTPVL(MSE)LTALSDVEYRVKGLN(MSE)GADDYLPKPFDLRELIARVRALIRRKSESKSTK LVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLV(MSE)NKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVD KGFKKKIIHTVRGIGYVARDE MNVRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLML TALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQIL EYLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARDE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermotoga Escherichia sample DRRD 2336 Thermotoga maritima 562 Escherichia coli B834 PLASMID pDrrD 2 2.43 49.48 VAPOR DIFFUSION, HANGING DROP 6.5 Protein at 12-25 mg/ml in 0.0125 M tris(hydroxymethyl)amino methane (TRIS) pH 8.0, 0.50 M NaCl; precipitating solution: 20% (w/v) PEG 3350, 0.10 M 2-(N-Morpholino)ethanesulfonic acid (MES) pH 6.5, 0.20 M potassium thiocyanate (KSCN), VAPOR DIFFUSION, HANGING DROP, temperature 295K 295 repository Initial release Version format compliance Advisory Version format compliance 1 0 2001-12-05 1 1 2008-04-27 1 2 2011-07-13 RCSB Y RCSB 2001-11-28 REL REL SCN THIOCYANATE ION HOH water SCN 301 2 SCN SCN 301 A SCN 302 2 SCN SCN 302 A SCN 303 2 SCN SCN 303 A SCN 304 2 SCN SCN 304 A SCN 305 2 SCN SCN 305 A SCN 306 2 SCN SCN 306 A HOH 1 3 HOH HOH 307 A HOH 2 3 HOH HOH 308 A HOH 3 3 HOH HOH 309 A HOH 4 3 HOH HOH 310 A HOH 5 3 HOH HOH 311 A HOH 6 3 HOH HOH 312 A HOH 7 3 HOH HOH 313 A HOH 8 3 HOH HOH 314 A HOH 9 3 HOH HOH 315 A HOH 10 3 HOH HOH 316 A HOH 11 3 HOH HOH 317 A HOH 12 3 HOH HOH 318 A HOH 13 3 HOH HOH 319 A HOH 14 3 HOH HOH 320 A HOH 15 3 HOH HOH 321 A HOH 16 3 HOH HOH 322 A HOH 17 3 HOH HOH 323 A HOH 18 3 HOH HOH 324 A HOH 19 3 HOH HOH 325 A HOH 20 3 HOH HOH 326 A HOH 21 3 HOH HOH 327 A HOH 22 3 HOH HOH 328 A HOH 23 3 HOH HOH 329 A HOH 24 3 HOH HOH 330 A HOH 25 3 HOH HOH 331 A HOH 26 3 HOH HOH 332 A HOH 27 3 HOH HOH 333 A HOH 28 3 HOH HOH 334 A HOH 29 3 HOH HOH 335 A HOH 30 3 HOH HOH 336 A HOH 31 3 HOH HOH 337 A HOH 32 3 HOH HOH 338 A HOH 33 3 HOH HOH 339 A HOH 34 3 HOH HOH 340 A HOH 35 3 HOH HOH 341 A HOH 36 3 HOH HOH 342 A HOH 37 3 HOH HOH 343 A HOH 38 3 HOH HOH 344 A HOH 39 3 HOH HOH 345 A HOH 40 3 HOH HOH 346 A HOH 41 3 HOH HOH 347 A HOH 42 3 HOH HOH 348 A HOH 43 3 HOH HOH 349 A HOH 44 3 HOH HOH 350 A HOH 45 3 HOH HOH 351 A HOH 46 3 HOH HOH 352 A HOH 47 3 HOH HOH 353 A HOH 48 3 HOH HOH 354 A HOH 49 3 HOH HOH 355 A HOH 50 3 HOH HOH 356 A HOH 51 3 HOH HOH 357 A HOH 52 3 HOH HOH 358 A HOH 53 3 HOH HOH 359 A HOH 54 3 HOH HOH 360 A HOH 55 3 HOH HOH 361 A HOH 56 3 HOH HOH 362 A HOH 57 3 HOH HOH 363 A HOH 58 3 HOH HOH 364 A HOH 59 3 HOH HOH 365 A HOH 60 3 HOH HOH 366 A HOH 61 3 HOH HOH 367 A HOH 62 3 HOH HOH 368 A HOH 63 3 HOH HOH 369 A HOH 64 3 HOH HOH 370 A HOH 65 3 HOH HOH 371 A HOH 66 3 HOH HOH 372 A HOH 67 3 HOH HOH 373 A HOH 68 3 HOH HOH 374 A HOH 69 3 HOH HOH 375 A HOH 70 3 HOH HOH 376 A HOH 71 3 HOH HOH 377 A HOH 72 3 HOH HOH 378 A HOH 73 3 HOH HOH 379 A HOH 74 3 HOH HOH 380 A HOH 75 3 HOH HOH 381 A HOH 76 3 HOH HOH 382 A HOH 77 3 HOH HOH 383 A HOH 78 3 HOH HOH 384 A HOH 79 3 HOH HOH 385 A HOH 80 3 HOH HOH 386 A HOH 81 3 HOH HOH 387 A HOH 82 3 HOH HOH 388 A HOH 83 3 HOH HOH 389 A HOH 84 3 HOH HOH 390 A HOH 85 3 HOH HOH 391 A HOH 86 3 HOH HOH 392 A HOH 87 3 HOH HOH 393 A HOH 88 3 HOH HOH 394 A HOH 89 3 HOH HOH 395 A HOH 90 3 HOH HOH 396 A HOH 91 3 HOH HOH 397 A HOH 92 3 HOH HOH 398 A HOH 93 3 HOH HOH 399 A HOH 94 3 HOH HOH 400 A HOH 95 3 HOH HOH 401 A HOH 96 3 HOH HOH 402 A HOH 97 3 HOH HOH 403 A HOH 98 3 HOH HOH 404 A HOH 99 3 HOH HOH 405 A HOH 100 3 HOH HOH 406 A HOH 101 3 HOH HOH 407 A HOH 102 3 HOH HOH 408 A HOH 103 3 HOH HOH 409 A HOH 104 3 HOH HOH 410 A HOH 105 3 HOH HOH 411 A HOH 106 3 HOH HOH 412 A HOH 107 3 HOH HOH 413 A HOH 108 3 HOH HOH 414 A HOH 109 3 HOH HOH 415 A HOH 110 3 HOH HOH 416 A HOH 111 3 HOH HOH 417 A HOH 112 3 HOH HOH 418 A HOH 113 3 HOH HOH 419 A HOH 114 3 HOH HOH 420 A HOH 115 3 HOH HOH 421 A HOH 116 3 HOH HOH 422 A HOH 117 3 HOH HOH 423 A HOH 118 3 HOH HOH 424 A HOH 119 3 HOH HOH 425 A HOH 120 3 HOH HOH 426 A HOH 121 3 HOH HOH 427 A HOH 122 3 HOH HOH 428 A HOH 123 3 HOH HOH 429 A HOH 124 3 HOH HOH 430 A HOH 125 3 HOH HOH 431 A HOH 126 3 HOH HOH 432 A HOH 127 3 HOH HOH 433 A HOH 128 3 HOH HOH 434 A HOH 129 3 HOH HOH 435 A HOH 130 3 HOH HOH 436 A HOH 131 3 HOH HOH 437 A HOH 132 3 HOH HOH 438 A HOH 133 3 HOH HOH 439 A HOH 134 3 HOH HOH 440 A HOH 135 3 HOH HOH 441 A HOH 136 3 HOH HOH 442 A HOH 137 3 HOH HOH 443 A HOH 138 3 HOH HOH 444 A HOH 139 3 HOH HOH 445 A HOH 140 3 HOH HOH 446 A HOH 141 3 HOH HOH 447 A HOH 142 3 HOH HOH 448 A HOH 143 3 HOH HOH 449 A HOH 144 3 HOH HOH 450 A HOH 145 3 HOH HOH 451 A HOH 146 3 HOH HOH 452 A HOH 147 3 HOH HOH 453 A HOH 148 3 HOH HOH 454 A HOH 149 3 HOH HOH 455 A HOH 150 3 HOH HOH 456 A HOH 151 3 HOH HOH 457 A HOH 152 3 HOH HOH 458 A HOH 153 3 HOH HOH 459 A HOH 154 3 HOH HOH 460 A HOH 155 3 HOH HOH 461 A HOH 156 3 HOH HOH 462 A HOH 157 3 HOH HOH 463 A HOH 158 3 HOH HOH 464 A HOH 159 3 HOH HOH 465 A HOH 160 3 HOH HOH 466 A HOH 161 3 HOH HOH 467 A HOH 162 3 HOH HOH 468 A HOH 163 3 HOH HOH 469 A HOH 164 3 HOH HOH 470 A HOH 165 3 HOH HOH 471 A HOH 166 3 HOH HOH 472 A HOH 167 3 HOH HOH 473 A HOH 168 3 HOH HOH 474 A HOH 169 3 HOH HOH 475 A HOH 170 3 HOH HOH 476 A HOH 171 3 HOH HOH 477 A HOH 172 3 HOH HOH 478 A HOH 173 3 HOH HOH 479 A HOH 174 3 HOH HOH 480 A HOH 175 3 HOH HOH 481 A HOH 176 3 HOH HOH 482 A HOH 177 3 HOH HOH 483 A HOH 178 3 HOH HOH 484 A HOH 179 3 HOH HOH 485 A HOH 180 3 HOH HOH 486 A HOH 181 3 HOH HOH 487 A HOH 182 3 HOH HOH 488 A HOH 183 3 HOH HOH 489 A HOH 184 3 HOH HOH 490 A HOH 185 3 HOH HOH 491 A HOH 186 3 HOH HOH 492 A HOH 187 3 HOH HOH 493 A HOH 188 3 HOH HOH 494 A HOH 189 3 HOH HOH 495 A HOH 190 3 HOH HOH 496 A HOH 191 3 HOH HOH 497 A HOH 192 3 HOH HOH 498 A HOH 193 3 HOH HOH 499 A HOH 194 3 HOH HOH 500 A HOH 195 3 HOH HOH 501 A HOH 196 3 HOH HOH 502 A HOH 197 3 HOH HOH 503 A HOH 198 3 HOH HOH 504 A HOH 199 3 HOH HOH 505 A HOH 200 3 HOH HOH 506 A HOH 201 3 HOH HOH 507 A HOH 202 3 HOH HOH 508 A HOH 203 3 HOH HOH 509 A HOH 204 3 HOH HOH 510 A HOH 205 3 HOH HOH 511 A HOH 206 3 HOH HOH 512 A n 1 1 A ASN 2 n 2 ASN 2 A VAL 3 n 3 VAL 3 A ARG 4 n 4 ARG 4 A VAL 5 n 5 VAL 5 A LEU 6 n 6 LEU 6 A VAL 7 n 7 VAL 7 A VAL 8 n 8 VAL 8 A GLU 9 n 9 GLU 9 A ASP 10 n 10 ASP 10 A GLU 11 n 11 GLU 11 A ARG 12 n 12 ARG 12 A ASP 13 n 13 ASP 13 A LEU 14 n 14 LEU 14 A ALA 15 n 15 ALA 15 A ASP 16 n 16 ASP 16 A LEU 17 n 17 LEU 17 A ILE 18 n 18 ILE 18 A THR 19 n 19 THR 19 A GLU 20 n 20 GLU 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A LYS 23 n 23 LYS 23 A LYS 24 n 24 LYS 24 A GLU 25 n 25 GLU 25 A MSE 26 n 26 MSE 26 A PHE 27 n 27 PHE 27 A THR 28 n 28 THR 28 A VAL 29 n 29 VAL 29 A ASP 30 n 30 ASP 30 A VAL 31 n 31 VAL 31 A CYS 32 n 32 CYS 32 A TYR 33 n 33 TYR 33 A ASP 34 n 34 ASP 34 A GLY 35 n 35 GLY 35 A GLU 36 n 36 GLU 36 A GLU 37 n 37 GLU 37 A GLY 38 n 38 GLY 38 A MSE 39 n 39 MSE 39 A TYR 40 n 40 TYR 40 A MSE 41 n 41 MSE 41 A ALA 42 n 42 ALA 42 A LEU 43 n 43 LEU 43 A ASN 44 n 44 ASN 44 A GLU 45 n 45 GLU 45 A PRO 46 n 46 PRO 46 A PHE 47 n 47 PHE 47 A ASP 48 n 48 ASP 48 A VAL 49 n 49 VAL 49 A VAL 50 n 50 VAL 50 A ILE 51 n 51 ILE 51 A LEU 52 n 52 LEU 52 A ASP 53 n 53 ASP 53 A ILE 54 n 54 ILE 54 A MSE 55 n 55 MSE 55 A LEU 56 n 56 LEU 56 A PRO 57 n 57 PRO 57 A VAL 58 n 58 VAL 58 A HIS 59 n 59 HIS 59 A ASP 60 n 60 ASP 60 A GLY 61 n 61 GLY 61 A TRP 62 n 62 TRP 62 A GLU 63 n 63 GLU 63 A ILE 64 n 64 ILE 64 A LEU 65 n 65 LEU 65 A LYS 66 n 66 LYS 66 A SER 67 n 67 SER 67 A MSE 68 n 68 MSE 68 A ARG 69 n 69 ARG 69 A GLU 70 n 70 GLU 70 A SER 71 n 71 SER 71 A GLY 72 n 72 GLY 72 A VAL 73 n 73 VAL 73 A ASN 74 n 74 ASN 74 A THR 75 n 75 THR 75 A PRO 76 n 76 PRO 76 A VAL 77 n 77 VAL 77 A LEU 78 n 78 LEU 78 A MSE 79 n 79 MSE 79 A LEU 80 n 80 LEU 80 A THR 81 n 81 THR 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A SER 84 n 84 SER 84 A ASP 85 n 85 ASP 85 A VAL 86 n 86 VAL 86 A GLU 87 n 87 GLU 87 A TYR 88 n 88 TYR 88 A ARG 89 n 89 ARG 89 A VAL 90 n 90 VAL 90 A LYS 91 n 91 LYS 91 A GLY 92 n 92 GLY 92 A LEU 93 n 93 LEU 93 A ASN 94 n 94 ASN 94 A MSE 95 n 95 MSE 95 A GLY 96 n 96 GLY 96 A ALA 97 n 97 ALA 97 A ASP 98 n 98 ASP 98 A ASP 99 n 99 ASP 99 A TYR 100 n 100 TYR 100 A LEU 101 n 101 LEU 101 A PRO 102 n 102 PRO 102 A LYS 103 n 103 LYS 103 A PRO 104 n 104 PRO 104 A PHE 105 n 105 PHE 105 A ASP 106 n 106 ASP 106 A LEU 107 n 107 LEU 107 A ARG 108 n 108 ARG 108 A GLU 109 n 109 GLU 109 A LEU 110 n 110 LEU 110 A ILE 111 n 111 ILE 111 A ALA 112 n 112 ALA 112 A ARG 113 n 113 ARG 113 A VAL 114 n 114 VAL 114 A ARG 115 n 115 ARG 115 A ALA 116 n 116 ALA 116 A LEU 117 n 117 LEU 117 A ILE 118 n 118 ILE 118 A ARG 119 n 119 ARG 119 A ARG 120 n 120 ARG 120 A LYS 121 n 121 LYS 121 A SER 122 n 122 SER 122 A GLU 123 n 123 GLU 123 A SER 124 n 124 SER 124 A LYS 125 n 125 LYS 125 A SER 126 n 126 SER 126 A THR 127 n 127 THR 127 A LYS 128 n 128 LYS 128 A LEU 129 n 129 LEU 129 A VAL 130 n 130 VAL 130 A CYS 131 n 131 CYS 131 A GLY 132 n 132 GLY 132 A ASP 133 n 133 ASP 133 A LEU 134 n 134 LEU 134 A ILE 135 n 135 ILE 135 A LEU 136 n 136 LEU 136 A ASP 137 n 137 ASP 137 A THR 138 n 138 THR 138 A ALA 139 n 139 ALA 139 A THR 140 n 140 THR 140 A LYS 141 n 141 LYS 141 A LYS 142 n 142 LYS 142 A ALA 143 n 143 ALA 143 A TYR 144 n 144 TYR 144 A ARG 145 n 145 ARG 145 A GLY 146 n 146 GLY 146 A SER 147 n 147 SER 147 A LYS 148 n 148 LYS 148 A GLU 149 n 149 GLU 149 A ILE 150 n 150 ILE 150 A ASP 151 n 151 ASP 151 A LEU 152 n 152 LEU 152 A THR 153 n 153 THR 153 A LYS 154 n 154 LYS 154 A LYS 155 n 155 LYS 155 A GLU 156 n 156 GLU 156 A TYR 157 n 157 TYR 157 A GLN 158 n 158 GLN 158 A ILE 159 n 159 ILE 159 A LEU 160 n 160 LEU 160 A GLU 161 n 161 GLU 161 A TYR 162 n 162 TYR 162 A LEU 163 n 163 LEU 163 A VAL 164 n 164 VAL 164 A MSE 165 n 165 MSE 165 A ASN 166 n 166 ASN 166 A LYS 167 n 167 LYS 167 A ASN 168 n 168 ASN 168 A ARG 169 n 169 ARG 169 A VAL 170 n 170 VAL 170 A VAL 171 n 171 VAL 171 A THR 172 n 172 THR 172 A LYS 173 n 173 LYS 173 A GLU 174 n 174 GLU 174 A GLU 175 n 175 GLU 175 A LEU 176 n 176 LEU 176 A GLN 177 n 177 GLN 177 A GLU 178 n 178 GLU 178 A HIS 179 n 179 HIS 179 A LEU 180 n 180 LEU 180 A TRP 181 n 181 TRP 181 A n 182 182 A n 183 183 A n 184 184 A n 185 185 A n 186 186 A VAL 187 n 187 VAL 187 A PHE 188 n 188 PHE 188 A SER 189 n 189 SER 189 A ASP 190 n 190 ASP 190 A VAL 191 n 191 VAL 191 A LEU 192 n 192 LEU 192 A ARG 193 n 193 ARG 193 A SER 194 n 194 SER 194 A HIS 195 n 195 HIS 195 A ILE 196 n 196 ILE 196 A LYS 197 n 197 LYS 197 A ASN 198 n 198 ASN 198 A LEU 199 n 199 LEU 199 A ARG 200 n 200 ARG 200 A LYS 201 n 201 LYS 201 A LYS 202 n 202 LYS 202 A VAL 203 n 203 VAL 203 A ASP 204 n 204 ASP 204 A LYS 205 n 205 LYS 205 A GLY 206 n 206 GLY 206 A PHE 207 n 207 PHE 207 A LYS 208 n 208 LYS 208 A LYS 209 n 209 LYS 209 A LYS 210 n 210 LYS 210 A ILE 211 n 211 ILE 211 A ILE 212 n 212 ILE 212 A HIS 213 n 213 HIS 213 A THR 214 n 214 THR 214 A VAL 215 n 215 VAL 215 A ARG 216 n 216 ARG 216 A GLY 217 n 217 GLY 217 A ILE 218 n 218 ILE 218 A GLY 219 n 219 GLY 219 A TYR 220 n 220 TYR 220 A VAL 221 n 221 VAL 221 A ALA 222 n 222 ALA 222 A ARG 223 n 223 ARG 223 A ASP 224 n 224 ASP 224 A GLU 225 n 225 GLU 225 A 0.4011 -0.0044 0.0056 0.4675 -0.1871 0.6133 -0.0089 0.0105 -0.0190 -0.0250 0.0140 0.0123 0.0133 -0.0094 -0.0050 0.0014 0.0034 -0.0021 0.0088 -0.0026 0.0181 refined 21.2920 28.9020 44.6080 X-RAY DIFFRACTION 0.2711 -0.0423 0.1121 0.1670 -0.0784 0.8994 0.0097 -0.0078 0.0143 0.0071 -0.0112 0.0062 -0.0220 -0.0005 0.0016 0.0277 0.0000 0.0010 0.0283 0.0038 0.0285 refined 21.2670 40.3510 76.1670 X-RAY DIFFRACTION A 2 A 2 A 122 A 122 X-RAY DIFFRACTION 1 A 127 A 127 A 225 A 225 X-RAY DIFFRACTION 2 author_defined_assembly 1 monomeric A MSE 26 SELENOMETHIONINE A MSE 26 MET A MSE 39 SELENOMETHIONINE A MSE 39 MET A MSE 41 SELENOMETHIONINE A MSE 41 MET A MSE 55 SELENOMETHIONINE A MSE 55 MET A MSE 68 SELENOMETHIONINE A MSE 68 MET A MSE 79 SELENOMETHIONINE A MSE 79 MET A MSE 95 SELENOMETHIONINE A MSE 95 MET A MSE 165 SELENOMETHIONINE A MSE 165 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 28 A O THR 28 A N VAL 5 A N VAL 5 A N LEU 6 A N LEU 6 A O ILE 51 A O ILE 51 A N LEU 52 A N LEU 52 A O LEU 80 A O LEU 80 A N MSE 79 A N MSE 79 A O LEU 101 A O LEU 101 A N LEU 129 A N LEU 129 A O LEU 136 A O LEU 136 A N ILE 135 A N ILE 135 A O TYR 144 A O TYR 144 A N ALA 143 A N ALA 143 A O ILE 150 A O ILE 150 A N VAL 171 A N VAL 171 A O TYR 220 A O TYR 220 A O GLY 219 A O GLY 219 A N VAL 215 A N VAL 215 1 A CG ASN 2 A CG ASN 2 0 Y 1 A OD1 ASN 2 A OD1 ASN 2 0 Y 1 A ND2 ASN 2 A ND2 ASN 2 0 Y 1 A CG ARG 108 A CG ARG 108 0 Y 1 A CD ARG 108 A CD ARG 108 0 Y 1 A NE ARG 108 A NE ARG 108 0 Y 1 A CZ ARG 108 A CZ ARG 108 0 Y 1 A NH1 ARG 108 A NH1 ARG 108 0 Y 1 A NH2 ARG 108 A NH2 ARG 108 0 Y 1 A CG LYS 121 A CG LYS 121 0 Y 1 A CD LYS 121 A CD LYS 121 0 Y 1 A CE LYS 121 A CE LYS 121 0 Y 1 A NZ LYS 121 A NZ LYS 121 0 Y 1 A CB GLU 123 A CB GLU 123 0 Y 1 A CG GLU 123 A CG GLU 123 0 Y 1 A CD GLU 123 A CD GLU 123 0 Y 1 A OE1 GLU 123 A OE1 GLU 123 0 Y 1 A OE2 GLU 123 A OE2 GLU 123 0 Y 1 A CB SER 126 A CB SER 126 0 Y 1 A OG SER 126 A OG SER 126 0 Y 1 A CD LYS 148 A CD LYS 148 0 Y 1 A CE LYS 148 A CE LYS 148 0 Y 1 A NZ LYS 148 A NZ LYS 148 0 Y 1 A CG LYS 173 A CG LYS 173 0 Y 1 A CD LYS 173 A CD LYS 173 0 Y 1 A CE LYS 173 A CE LYS 173 0 Y 1 A NZ LYS 173 A NZ LYS 173 0 Y 1 A CG GLU 178 A CG GLU 178 0 Y 1 A CD GLU 178 A CD GLU 178 0 Y 1 A OE1 GLU 178 A OE1 GLU 178 0 Y 1 A OE2 GLU 178 A OE2 GLU 178 0 Y 1 A CB SER 189 A CB SER 189 0 Y 1 A OG SER 189 A OG SER 189 0 Y 1 A CD LYS 201 A CD LYS 201 0 Y 1 A CE LYS 201 A CE LYS 201 0 Y 1 A NZ LYS 201 A NZ LYS 201 0 Y 1 A CD LYS 205 A CD LYS 205 0 Y 1 A CE LYS 205 A CE LYS 205 0 Y 1 A NZ LYS 205 A NZ LYS 205 0 Y 1 A CG LYS 208 A CG LYS 208 0 Y 1 A CD LYS 208 A CD LYS 208 0 Y 1 A CE LYS 208 A CE LYS 208 0 Y 1 A NZ LYS 208 A NZ LYS 208 0 Y 1 A CG LYS 209 A CG LYS 209 0 Y 1 A CD LYS 209 A CD LYS 209 0 Y 1 A CE LYS 209 A CE LYS 209 0 Y 1 A NZ LYS 209 A NZ LYS 209 0 Y 1 A MSE 1 A MSE 1 1 Y 1 A SER 124 A SER 124 0 Y 1 A LYS 125 A LYS 125 0 Y 1 A SER 182 A SER 182 1 Y 1 A PHE 183 A PHE 183 1 Y 1 A ASP 184 A ASP 184 1 Y 1 A ASP 185 A ASP 185 1 Y 1 A GLU 186 A GLU 186 1 Y 1 A VAL 187 A VAL 187 0 Y 1 A A O O SER HOH 189 463 2.08 1 6.77 0.90 118.30 125.07 A A A CB CG OD2 ASP ASP ASP 48 48 48 N 1 5.19 0.50 120.30 125.49 A A A NE CZ NH1 ARG ARG ARG 89 89 89 N 1 -3.91 0.50 120.30 116.39 A A A NE CZ NH2 ARG ARG ARG 89 89 89 N 1 -34.32 1.90 110.10 75.78 A A A CB CA C SER SER SER 124 124 124 N 1 -24.28 1.50 110.50 86.22 A A A N CA CB SER SER SER 124 124 124 N 1 17.56 2.70 111.20 128.76 A A A CA CB OG SER SER SER 124 124 124 N 1 12.86 2.00 110.40 123.26 A A A CB CA C LYS LYS LYS 125 125 125 N 1 23.76 2.20 113.40 137.16 A A A CA CB CG LYS LYS LYS 125 125 125 N 1 14.94 1.90 110.10 125.04 A A A CB CA C SER SER SER 126 126 126 N 1 21.22 2.20 113.40 134.62 A A A CA CB CG GLU GLU GLU 178 178 178 N 1 24.38 2.60 111.60 135.98 A A A CB CG CD LYS LYS LYS 205 205 205 N 1 A A SE CE MSE MSE 26 26 -0.363 0.059 1.950 1.587 N 1 A A CA CB SER SER 124 124 1.315 0.015 1.525 2.840 N 1 A A CA CB LYS LYS 125 125 0.490 0.022 1.535 2.025 N 1 A A CA CB SER SER 126 126 -0.093 0.015 1.525 1.432 N 1 A A CB CG GLU GLU 178 178 -0.248 0.019 1.517 1.269 N 1 A A CG CD LYS LYS 205 205 -0.508 0.034 1.520 1.012 N 1 A VAL 58 75.38 -62.09 1 A SER 124 -23.02 111.88 13.834 0.32 0.00 -0.22 0.33 0.00 -0.78 0.954 0.941 Maximum likelihood target and experimental phases as Hendrickson-Lattman coefficients used throughout refinement. TLS refinement performed for last stages where each subdomain defined as separate group. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2098400 0.1791100 0.1806000 0.1806000 1.50 20.0 2026 40628 40466 5.0 99.58 1.612 0.061 RANDOM LIKELY RESIDUAL 1 BABINET MODEL WITH MASK THROUGHOUT 0.0 MAD 0.069 0.072 0.80 0.80 1.40 Engh & Huber BABINET MODEL WITH MASK 1.50 20.0 206 1998 18 0 1774 0.020 0.022 1758 0.001 0.020 1674 1.650 1.985 2360 1.834 3.000 3866 4.546 3.000 213 12.756 15.000 339 0.105 0.200 278 0.007 0.020 1889 0.002 0.020 339 0.232 0.300 355 0.194 0.300 1553 0.197 0.500 1 0.145 0.500 164 0.037 0.500 4 0.300 0.300 14 0.265 0.300 57 0.142 0.500 27 1.030 1.500 1084 1.771 2.000 1739 2.945 3.000 674 4.526 4.500 621 0.2270000 0.1900000 1.539 140 2816 2816 20 14.7 1.50 20.0 1KGS 40628 40466 1.0 0.0 0.0520000 0.0520000 1 7.5 5.4 99.6 0.1390000 1.50 1.57 5.0 5891 0.1390000 1 5.4 100 phasing SOLVE refinement REFMAC 5.0 data reduction MOSFLM data scaling CCP4 (SCALA) DNA BINDING RESPONSE REGULATOR D Crystal Structure at 1.50 A of an OmpR/PhoB Homolog from Thermotoga maritima 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N A GLU 11 A GLU 11 HELX_P A GLU 25 A GLU 25 1 1 15 A ASP 34 A ASP 34 HELX_P A GLU 45 A GLU 45 1 2 12 A ASP 60 A ASP 60 HELX_P A SER 71 A SER 71 1 3 12 A SER 84 A SER 84 HELX_P A GLY 92 A GLY 92 1 4 9 A ASP 106 A ASP 106 HELX_P A SER 122 A SER 122 1 5 17 A THR 153 A THR 153 HELX_P A ASN 166 A ASN 166 1 6 14 A LYS 173 A LYS 173 HELX_P A LEU 180 A LEU 180 1 7 8 A VAL 187 A VAL 187 HELX_P A LYS 205 A LYS 205 1 8 19 covale 1.338 A GLU 25 A C GLU 25 1_555 A MSE 26 A N MSE 26 1_555 covale 1.337 A MSE 26 A C MSE 26 1_555 A PHE 27 A N PHE 27 1_555 covale 1.323 A GLY 38 A C GLY 38 1_555 A MSE 39 A N MSE 39 1_555 covale 1.331 A MSE 39 A C MSE 39 1_555 A TYR 40 A N TYR 40 1_555 covale 1.325 A TYR 40 A C TYR 40 1_555 A MSE 41 A N MSE 41 1_555 covale 1.316 A MSE 41 A C MSE 41 1_555 A ALA 42 A N ALA 42 1_555 covale 1.327 A ILE 54 A C ILE 54 1_555 A MSE 55 A N MSE 55 1_555 covale 1.333 A MSE 55 A C MSE 55 1_555 A LEU 56 A N LEU 56 1_555 covale 1.331 A SER 67 A C SER 67 1_555 A MSE 68 A N MSE 68 1_555 covale 1.321 A MSE 68 A C MSE 68 1_555 A ARG 69 A N ARG 69 1_555 covale 1.337 A LEU 78 A C LEU 78 1_555 A MSE 79 A N MSE 79 1_555 covale 1.328 A MSE 79 A C MSE 79 1_555 A LEU 80 A N LEU 80 1_555 covale 1.323 A ASN 94 A C ASN 94 1_555 A MSE 95 A N MSE 95 1_555 covale 1.311 A MSE 95 A C MSE 95 1_555 A GLY 96 A N GLY 96 1_555 covale 1.324 A VAL 164 A C VAL 164 1_555 A MSE 165 A N MSE 165 1_555 covale 1.331 A MSE 165 A C MSE 165 1_555 A ASN 166 A N ASN 166 1_555 DNA BINDING PROTEIN DNA-binding protein, alph-beta sandwich, winged-helix, helix-turn-helix, response regulator, DNA BINDING PROTEIN A LYS 103 A LYS 103 1 A PRO 104 A PRO 104 2.06 Q9WYN0_THEMA UNP 1 1 Q9WYN0 MNVRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLML TALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQIL EYLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARDE 1 225 1KGS 1 225 Q9WYN0 A 1 1 225 1 MET MODIFIED RESIDUE MSE 1 1KGS A Q9WYN0 UNP 1 1 1 MET MODIFIED RESIDUE MSE 26 1KGS A Q9WYN0 UNP 26 26 1 MET MODIFIED RESIDUE MSE 39 1KGS A Q9WYN0 UNP 39 39 1 MET MODIFIED RESIDUE MSE 41 1KGS A Q9WYN0 UNP 41 41 1 MET MODIFIED RESIDUE MSE 55 1KGS A Q9WYN0 UNP 55 55 1 MET MODIFIED RESIDUE MSE 68 1KGS A Q9WYN0 UNP 68 68 1 MET MODIFIED RESIDUE MSE 79 1KGS A Q9WYN0 UNP 79 79 1 MET MODIFIED RESIDUE MSE 95 1KGS A Q9WYN0 UNP 95 95 1 MET MODIFIED RESIDUE MSE 165 1KGS A Q9WYN0 UNP 165 165 5 4 3 parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 28 A THR 28 A CYS 32 A CYS 32 A ARG 4 A ARG 4 A VAL 8 A VAL 8 A VAL 49 A VAL 49 A ASP 53 A ASP 53 A VAL 77 A VAL 77 A THR 81 A THR 81 A ASP 99 A ASP 99 A PRO 102 A PRO 102 A LYS 128 A LYS 128 A CYS 131 A CYS 131 A LEU 134 A LEU 134 A ASP 137 A ASP 137 A LYS 142 A LYS 142 A ARG 145 A ARG 145 A LYS 148 A LYS 148 A ILE 150 A ILE 150 A VAL 171 A VAL 171 A THR 172 A THR 172 A GLY 219 A GLY 219 A ALA 222 A ALA 222 A ILE 212 A ILE 212 A VAL 215 A VAL 215 BINDING SITE FOR RESIDUE SCN A 301 Software 6 BINDING SITE FOR RESIDUE SCN A 302 Software 4 BINDING SITE FOR RESIDUE SCN A 303 Software 6 BINDING SITE FOR RESIDUE SCN A 304 Software 4 BINDING SITE FOR RESIDUE SCN A 305 Software 5 BINDING SITE FOR RESIDUE SCN A 306 Software 3 A ALA 116 A ALA 116 6 1_555 A ARG 119 A ARG 119 6 1_555 A ARG 120 A ARG 120 6 1_555 A TYR 144 A TYR 144 6 1_555 A GLY 146 A GLY 146 6 1_555 A SER 147 A SER 147 6 1_555 A VAL 90 A VAL 90 4 1_555 A HOH 316 H HOH 4 1_555 A HOH 333 H HOH 4 1_555 A HOH 338 H HOH 4 1_555 A ARG 12 A ARG 12 6 1_656 A ASP 16 A ASP 16 6 1_656 A TYR 33 A TYR 33 6 1_656 A ASN 168 A ASN 168 6 1_555 A ARG 223 A ARG 223 6 1_555 A HOH 311 H HOH 6 1_555 A MSE 39 A MSE 39 4 1_555 A TYR 40 A TYR 40 4 1_555 A ASN 44 A ASN 44 4 1_555 A HOH 406 H HOH 4 1_555 A ARG 12 A ARG 12 5 1_656 A HIS 213 A HIS 213 5 1_555 A ARG 223 A ARG 223 5 1_555 A GLU 225 A GLU 225 5 1_555 A HOH 426 H HOH 5 1_555 A ALA 21 A ALA 21 3 1_555 A LYS 24 A LYS 24 3 1_555 A HOH 502 H HOH 3 1_555 4 P 1 21 1