0.010419
0.006015
-0.000001
0.000000
0.012030
-0.000001
0.000000
0.000000
0.013617
0.00000
0.00000
0.00000
Beaman, T.W.
Vogel, K.W.
Drueckhammer, D.G.
Blanchard, J.S.
Roderick, S.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
9
90.00
90.00
120.00
95.980
95.980
73.440
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C7 H12 O4
160.168
PIMELIC ACID
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C25 H40 N7 O19 P3 S
867.607
SUCCINYL-COENZYME A
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
C
N
274
N
O
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
O
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
Y
313
N
C
Y
314
N
N
Y
315
N
C
Y
316
N
C
Y
317
N
N
Y
318
N
N
Y
319
N
C
Y
320
N
N
Y
321
N
C
N
322
N
N
N
323
R
C
N
324
R
C
N
325
N
O
N
326
S
C
N
327
N
O
N
328
R
C
N
329
N
O
N
330
N
C
N
331
N
O
N
332
R
P
N
333
N
O
N
334
N
O
N
335
N
O
N
336
R
P
N
337
N
O
N
338
N
O
N
339
N
O
N
340
N
C
N
341
N
C
N
342
R
C
N
343
N
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
N
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
N
N
354
N
C
N
355
N
C
N
356
N
P
N
357
N
O
N
358
N
O
N
359
N
O
N
360
N
S
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
N
413
N
O
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
R
C
N
427
N
O
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
N
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
N
453
N
O
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
N
477
N
O
N
478
N
O
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
N
N
491
S
C
N
492
N
C
N
493
N
O
N
494
N
C
N
495
N
C
N
496
N
C
N
497
N
O
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
Y
299
N
sing
Y
300
N
doub
N
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
sing
Y
305
N
doub
Y
306
N
sing
Y
307
N
doub
Y
308
N
sing
Y
309
N
doub
N
310
N
sing
Y
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
Y
436
N
doub
Y
437
N
sing
Y
438
N
sing
N
439
N
sing
Y
440
N
doub
Y
441
N
sing
Y
442
N
sing
N
443
N
sing
Y
444
N
sing
Y
445
N
doub
N
446
N
sing
Y
447
N
doub
N
448
N
sing
Y
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
Y
464
N
doub
Y
465
N
sing
Y
466
N
sing
N
467
N
sing
Y
468
N
doub
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
doub
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
11
974
979
10.1110/ps.4310102
11910040
Acyl group specificity at the active site of tetrahydridipicolinate N-succinyltransferase.
2002
10.2210/pdb1kgt/pdb
pdb_00001kgt
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
AREA DETECTOR
1999-04-02
XENTRONICS
Graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
29918.990
2,3,4,5-TETRAHYDROPYRIDINE-2-CARBOXYLATE N-SUCCINYLTRANSFERASE
2.3.1.117
1
man
polymer
160.168
PIMELIC ACID
1
syn
non-polymer
867.607
SUCCINYL-COENZYME A
1
syn
non-polymer
18.015
water
58
nat
water
TETRAHYDRODIPICOLINATE N-SUCCINYLTRANSFERASE, THP SUCCINYLTRANSFERASE, TETRAHYDROPICOLINATE SUCCINYLASE
no
no
MQQLQNVIESAFERRADITPANVDTVTREAVNQVIGLLDSGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNKVMDGAET
RYYDKVPMKFADYDEARFQKEGFRVVPPATVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYLGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS
KDGSYSLYCAVIVKKVDAKTRGKVGINELLRTID
MQQLQNVIESAFERRADITPANVDTVTREAVNQVIGLLDSGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNKVMDGAET
RYYDKVPMKFADYDEARFQKEGFRVVPPATVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYLGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS
KDGSYSLYCAVIVKKVDAKTRGKVGINELLRTID
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mycobacterium
Escherichia
Escherichia coli
sample
dapD
1765
Mycobacterium bovis
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET3a
1
2.18
43.45
VAPOR DIFFUSION, HANGING DROP
6.4
PEG 4000, ammonium sulfate, MES, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
software
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-04-03
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_software.name
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1TDT contains the apoenzyme structure of DapD
2TDT contains DapD in complex with L-2-aminopimelate and Coenzyme A
3TDT contains DapD in complex with L-2-amino-6-oxopimelate and Coenzyme A
Crystal Structure of Tetrahydrodipicolinate N-Succinyltransferase in Complex with L-2-aminopimelate and Succinamide-CoA
RCSB
Y
RCSB
2001-11-28
REL
PML
PIMELIC ACID
SCA
SUCCINYL-COENZYME A
HOH
water
PIM
1
2
PML
PML
301
A
SCO
2
3
SCA
SCA
302
A
HOH
1
4
HOH
HOH
303
A
HOH
2
4
HOH
HOH
304
A
HOH
6
4
HOH
HOH
305
A
HOH
7
4
HOH
HOH
306
A
HOH
9
4
HOH
HOH
307
A
HOH
10
4
HOH
HOH
308
A
HOH
11
4
HOH
HOH
309
A
HOH
12
4
HOH
HOH
310
A
HOH
13
4
HOH
HOH
311
A
HOH
14
4
HOH
HOH
312
A
HOH
15
4
HOH
HOH
313
A
HOH
16
4
HOH
HOH
314
A
HOH
17
4
HOH
HOH
315
A
HOH
18
4
HOH
HOH
316
A
HOH
19
4
HOH
HOH
317
A
HOH
20
4
HOH
HOH
318
A
HOH
21
4
HOH
HOH
319
A
HOH
22
4
HOH
HOH
320
A
HOH
24
4
HOH
HOH
321
A
HOH
25
4
HOH
HOH
322
A
HOH
26
4
HOH
HOH
323
A
HOH
28
4
HOH
HOH
324
A
HOH
29
4
HOH
HOH
325
A
HOH
30
4
HOH
HOH
326
A
HOH
31
4
HOH
HOH
327
A
HOH
32
4
HOH
HOH
328
A
HOH
33
4
HOH
HOH
329
A
HOH
37
4
HOH
HOH
330
A
HOH
38
4
HOH
HOH
331
A
HOH
41
4
HOH
HOH
332
A
HOH
42
4
HOH
HOH
333
A
HOH
43
4
HOH
HOH
334
A
HOH
45
4
HOH
HOH
335
A
HOH
47
4
HOH
HOH
336
A
HOH
48
4
HOH
HOH
337
A
HOH
49
4
HOH
HOH
338
A
HOH
50
4
HOH
HOH
339
A
HOH
51
4
HOH
HOH
340
A
HOH
56
4
HOH
HOH
341
A
HOH
57
4
HOH
HOH
342
A
HOH
58
4
HOH
HOH
343
A
HOH
59
4
HOH
HOH
344
A
HOH
61
4
HOH
HOH
345
A
HOH
62
4
HOH
HOH
346
A
HOH
64
4
HOH
HOH
347
A
HOH
65
4
HOH
HOH
348
A
HOH
66
4
HOH
HOH
349
A
HOH
67
4
HOH
HOH
350
A
HOH
71
4
HOH
HOH
351
A
HOH
72
4
HOH
HOH
352
A
HOH
73
4
HOH
HOH
353
A
HOH
76
4
HOH
HOH
354
A
HOH
79
4
HOH
HOH
355
A
HOH
80
4
HOH
HOH
356
A
HOH
82
4
HOH
HOH
357
A
HOH
86
4
HOH
HOH
358
A
HOH
91
4
HOH
HOH
359
A
HOH
102
4
HOH
HOH
360
A
MET
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
GLN
3
n
3
GLN
3
A
LEU
4
n
4
LEU
4
A
GLN
5
n
5
GLN
5
A
ASN
6
n
6
ASN
6
A
VAL
7
n
7
VAL
7
A
ILE
8
n
8
ILE
8
A
GLU
9
n
9
GLU
9
A
SER
10
n
10
SER
10
A
ALA
11
n
11
ALA
11
A
PHE
12
n
12
PHE
12
A
GLU
13
n
13
GLU
13
A
ARG
14
n
14
ARG
14
A
ARG
15
n
15
ARG
15
A
ALA
16
n
16
ALA
16
A
ASP
17
n
17
ASP
17
A
ILE
18
n
18
ILE
18
A
THR
19
n
19
THR
19
A
PRO
20
n
20
PRO
20
A
ALA
21
n
21
ALA
21
A
ASN
22
n
22
ASN
22
A
VAL
23
n
23
VAL
23
A
ASP
24
n
24
ASP
24
A
THR
25
n
25
THR
25
A
VAL
26
n
26
VAL
26
A
THR
27
n
27
THR
27
A
ARG
28
n
28
ARG
28
A
GLU
29
n
29
GLU
29
A
ALA
30
n
30
ALA
30
A
VAL
31
n
31
VAL
31
A
ASN
32
n
32
ASN
32
A
GLN
33
n
33
GLN
33
A
VAL
34
n
34
VAL
34
A
ILE
35
n
35
ILE
35
A
GLY
36
n
36
GLY
36
A
LEU
37
n
37
LEU
37
A
LEU
38
n
38
LEU
38
A
ASP
39
n
39
ASP
39
A
SER
40
n
40
SER
40
A
GLY
41
n
41
GLY
41
A
ALA
42
n
42
ALA
42
A
LEU
43
n
43
LEU
43
A
ARG
44
n
44
ARG
44
A
VAL
45
n
45
VAL
45
A
ALA
46
n
46
ALA
46
A
GLU
47
n
47
GLU
47
A
LYS
48
n
48
LYS
48
A
ILE
49
n
49
ILE
49
A
ASP
50
n
50
ASP
50
A
GLY
51
n
51
GLY
51
A
GLN
52
n
52
GLN
52
A
TRP
53
n
53
TRP
53
A
VAL
54
n
54
VAL
54
A
THR
55
n
55
THR
55
A
HIS
56
n
56
HIS
56
A
GLN
57
n
57
GLN
57
A
TRP
58
n
58
TRP
58
A
LEU
59
n
59
LEU
59
A
LYS
60
n
60
LYS
60
A
LYS
61
n
61
LYS
61
A
ALA
62
n
62
ALA
62
A
VAL
63
n
63
VAL
63
A
LEU
64
n
64
LEU
64
A
LEU
65
n
65
LEU
65
A
SER
66
n
66
SER
66
A
PHE
67
n
67
PHE
67
A
ARG
68
n
68
ARG
68
A
ILE
69
n
69
ILE
69
A
ASN
70
n
70
ASN
70
A
ASP
71
n
71
ASP
71
A
ASN
72
n
72
ASN
72
A
LYS
73
n
73
LYS
73
A
VAL
74
n
74
VAL
74
A
MET
75
n
75
MET
75
A
ASP
76
n
76
ASP
76
A
GLY
77
n
77
GLY
77
A
ALA
78
n
78
ALA
78
A
GLU
79
n
79
GLU
79
A
THR
80
n
80
THR
80
A
ARG
81
n
81
ARG
81
A
TYR
82
n
82
TYR
82
A
TYR
83
n
83
TYR
83
A
ASP
84
n
84
ASP
84
A
LYS
85
n
85
LYS
85
A
VAL
86
n
86
VAL
86
A
PRO
87
n
87
PRO
87
A
MET
88
n
88
MET
88
A
LYS
89
n
89
LYS
89
A
PHE
90
n
90
PHE
90
A
ALA
91
n
91
ALA
91
A
ASP
92
n
92
ASP
92
A
TYR
93
n
93
TYR
93
A
ASP
94
n
94
ASP
94
A
GLU
95
n
95
GLU
95
A
ALA
96
n
96
ALA
96
A
ARG
97
n
97
ARG
97
A
PHE
98
n
98
PHE
98
A
GLN
99
n
99
GLN
99
A
LYS
100
n
100
LYS
100
A
GLU
101
n
101
GLU
101
A
GLY
102
n
102
GLY
102
A
PHE
103
n
103
PHE
103
A
ARG
104
n
104
ARG
104
A
VAL
105
n
105
VAL
105
A
VAL
106
n
106
VAL
106
A
PRO
107
n
107
PRO
107
A
PRO
108
n
108
PRO
108
A
ALA
109
n
109
ALA
109
A
THR
110
n
110
THR
110
A
VAL
111
n
111
VAL
111
A
ARG
112
n
112
ARG
112
A
GLN
113
n
113
GLN
113
A
GLY
114
n
114
GLY
114
A
ALA
115
n
115
ALA
115
A
PHE
116
n
116
PHE
116
A
ILE
117
n
117
ILE
117
A
ALA
118
n
118
ALA
118
A
ARG
119
n
119
ARG
119
A
ASN
120
n
120
ASN
120
A
THR
121
n
121
THR
121
A
VAL
122
n
122
VAL
122
A
LEU
123
n
123
LEU
123
A
MET
124
n
124
MET
124
A
PRO
125
n
125
PRO
125
A
SER
126
n
126
SER
126
A
TYR
127
n
127
TYR
127
A
VAL
128
n
128
VAL
128
A
ASN
129
n
129
ASN
129
A
ILE
130
n
130
ILE
130
A
GLY
131
n
131
GLY
131
A
ALA
132
n
132
ALA
132
A
TYR
133
n
133
TYR
133
A
VAL
134
n
134
VAL
134
A
ASP
135
n
135
ASP
135
A
GLU
136
n
136
GLU
136
A
GLY
137
n
137
GLY
137
A
THR
138
n
138
THR
138
A
MET
139
n
139
MET
139
A
VAL
140
n
140
VAL
140
A
ASP
141
n
141
ASP
141
A
THR
142
n
142
THR
142
A
TRP
143
n
143
TRP
143
A
ALA
144
n
144
ALA
144
A
THR
145
n
145
THR
145
A
VAL
146
n
146
VAL
146
A
GLY
147
n
147
GLY
147
A
SER
148
n
148
SER
148
A
CYS
149
n
149
CYS
149
A
ALA
150
n
150
ALA
150
A
GLN
151
n
151
GLN
151
A
ILE
152
n
152
ILE
152
A
GLY
153
n
153
GLY
153
A
LYS
154
n
154
LYS
154
A
ASN
155
n
155
ASN
155
A
VAL
156
n
156
VAL
156
A
HIS
157
n
157
HIS
157
A
LEU
158
n
158
LEU
158
A
SER
159
n
159
SER
159
A
GLY
160
n
160
GLY
160
A
GLY
161
n
161
GLY
161
A
VAL
162
n
162
VAL
162
A
GLY
163
n
163
GLY
163
A
ILE
164
n
164
ILE
164
A
GLY
165
n
165
GLY
165
A
GLY
166
n
166
GLY
166
A
VAL
167
n
167
VAL
167
A
LEU
168
n
168
LEU
168
A
GLU
169
n
169
GLU
169
A
PRO
170
n
170
PRO
170
A
LEU
171
n
171
LEU
171
A
GLN
172
n
172
GLN
172
A
ALA
173
n
173
ALA
173
A
ASN
174
n
174
ASN
174
A
PRO
175
n
175
PRO
175
A
THR
176
n
176
THR
176
A
ILE
177
n
177
ILE
177
A
ILE
178
n
178
ILE
178
A
GLU
179
n
179
GLU
179
A
ASP
180
n
180
ASP
180
A
ASN
181
n
181
ASN
181
A
CYS
182
n
182
CYS
182
A
PHE
183
n
183
PHE
183
A
ILE
184
n
184
ILE
184
A
GLY
185
n
185
GLY
185
A
ALA
186
n
186
ALA
186
A
ARG
187
n
187
ARG
187
A
SER
188
n
188
SER
188
A
GLU
189
n
189
GLU
189
A
VAL
190
n
190
VAL
190
A
VAL
191
n
191
VAL
191
A
GLU
192
n
192
GLU
192
A
GLY
193
n
193
GLY
193
A
VAL
194
n
194
VAL
194
A
ILE
195
n
195
ILE
195
A
VAL
196
n
196
VAL
196
A
GLU
197
n
197
GLU
197
A
GLU
198
n
198
GLU
198
A
GLY
199
n
199
GLY
199
A
SER
200
n
200
SER
200
A
VAL
201
n
201
VAL
201
A
ILE
202
n
202
ILE
202
A
SER
203
n
203
SER
203
A
MET
204
n
204
MET
204
A
GLY
205
n
205
GLY
205
A
VAL
206
n
206
VAL
206
A
TYR
207
n
207
TYR
207
A
LEU
208
n
208
LEU
208
A
GLY
209
n
209
GLY
209
A
GLN
210
n
210
GLN
210
A
SER
211
n
211
SER
211
A
THR
212
n
212
THR
212
A
ARG
213
n
213
ARG
213
A
ILE
214
n
214
ILE
214
A
TYR
215
n
215
TYR
215
A
ASP
216
n
216
ASP
216
A
ARG
217
n
217
ARG
217
A
GLU
218
n
218
GLU
218
A
THR
219
n
219
THR
219
A
GLY
220
n
220
GLY
220
A
GLU
221
n
221
GLU
221
A
ILE
222
n
222
ILE
222
A
HIS
223
n
223
HIS
223
A
TYR
224
n
224
TYR
224
A
GLY
225
n
225
GLY
225
A
ARG
226
n
226
ARG
226
A
VAL
227
n
227
VAL
227
A
PRO
228
n
228
PRO
228
A
ALA
229
n
229
ALA
229
A
GLY
230
n
230
GLY
230
A
SER
231
n
231
SER
231
A
VAL
232
n
232
VAL
232
A
VAL
233
n
233
VAL
233
A
VAL
234
n
234
VAL
234
A
SER
235
n
235
SER
235
A
GLY
236
n
236
GLY
236
A
ASN
237
n
237
ASN
237
A
LEU
238
n
238
LEU
238
A
PRO
239
n
239
PRO
239
A
SER
240
n
240
SER
240
A
LYS
241
n
241
LYS
241
A
ASP
242
n
242
ASP
242
A
GLY
243
n
243
GLY
243
A
SER
244
n
244
SER
244
A
TYR
245
n
245
TYR
245
A
SER
246
n
246
SER
246
A
LEU
247
n
247
LEU
247
A
TYR
248
n
248
TYR
248
A
CYS
249
n
249
CYS
249
A
ALA
250
n
250
ALA
250
A
VAL
251
n
251
VAL
251
A
ILE
252
n
252
ILE
252
A
VAL
253
n
253
VAL
253
A
LYS
254
n
254
LYS
254
A
LYS
255
n
255
LYS
255
A
VAL
256
n
256
VAL
256
A
ASP
257
n
257
ASP
257
A
ALA
258
n
258
ALA
258
A
LYS
259
n
259
LYS
259
A
THR
260
n
260
THR
260
A
ARG
261
n
261
ARG
261
A
GLY
262
n
262
GLY
262
A
LYS
263
n
263
LYS
263
A
VAL
264
n
264
VAL
264
A
GLY
265
n
265
GLY
265
A
ILE
266
n
266
ILE
266
A
ASN
267
n
267
ASN
267
A
GLU
268
n
268
GLU
268
A
LEU
269
n
269
LEU
269
A
LEU
270
n
270
LEU
270
A
ARG
271
n
271
ARG
271
A
THR
272
n
272
THR
272
A
ILE
273
n
273
ILE
273
A
ASP
274
n
274
ASP
274
A
author_and_software_defined_assembly
PISA,PQS
3
trimeric
19110
-87
26430
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_765
-y+2,x-y+1,z
crystal symmetry operation
143.9700000000
83.1211182552
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_675
-x+y+1,-x+2,z
crystal symmetry operation
0.0000000000
166.2422365105
0.0000000000
A
N
ILE
49
A
N
ILE
49
A
O
GLN
52
A
O
GLN
52
A
N
MET
75
A
N
MET
75
A
O
TYR
82
A
O
TYR
82
A
N
ARG
104
A
N
ARG
104
A
O
LEU
123
A
O
LEU
123
A
N
VAL
122
A
N
VAL
122
A
O
VAL
140
A
O
VAL
140
A
N
MET
139
A
N
MET
139
A
O
LEU
158
A
O
LEU
158
A
N
HIS
157
A
N
HIS
157
A
O
ILE
184
A
O
ILE
184
A
N
PHE
183
A
N
PHE
183
A
O
ILE
202
A
O
ILE
202
A
N
VAL
201
A
N
VAL
201
A
O
SER
231
A
O
SER
231
A
N
VAL
234
A
N
VAL
234
A
O
VAL
251
A
O
VAL
251
A
O
ILE
252
A
O
ILE
252
A
N
TYR
215
A
N
TYR
215
A
N
ILE
214
A
N
ILE
214
A
O
HIS
223
A
O
HIS
223
A
N
THR
110
A
N
THR
110
A
O
VAL
128
A
O
VAL
128
A
N
TYR
127
A
N
TYR
127
A
O
VAL
146
A
O
VAL
146
A
N
THR
145
A
N
THR
145
A
O
ILE
164
A
O
ILE
164
A
N
GLY
163
A
N
GLY
163
A
O
VAL
190
A
O
VAL
190
A
N
GLU
189
A
N
GLU
189
A
O
LEU
208
A
O
LEU
208
A
N
PHE
116
A
N
PHE
116
A
O
VAL
134
A
O
VAL
134
A
N
TYR
133
A
N
TYR
133
A
O
ILE
152
A
O
ILE
152
A
N
GLN
151
A
N
GLN
151
A
O
ILE
178
A
O
ILE
178
A
N
ILE
177
A
N
ILE
177
A
O
VAL
196
A
O
VAL
196
A
N
ILE
195
A
N
ILE
195
A
O
VAL
227
A
O
VAL
227
1
A
CG
GLN
2
A
CG
GLN
2
1
Y
1
A
CD
GLN
2
A
CD
GLN
2
1
Y
1
A
OE1
GLN
2
A
OE1
GLN
2
1
Y
1
A
NE2
GLN
2
A
NE2
GLN
2
1
Y
1
A
CG
GLU
13
A
CG
GLU
13
1
Y
1
A
CD
GLU
13
A
CD
GLU
13
1
Y
1
A
OE1
GLU
13
A
OE1
GLU
13
1
Y
1
A
OE2
GLU
13
A
OE2
GLU
13
1
Y
1
A
CG
GLN
52
A
CG
GLN
52
1
Y
1
A
CD
GLN
52
A
CD
GLN
52
1
Y
1
A
OE1
GLN
52
A
OE1
GLN
52
1
Y
1
A
NE2
GLN
52
A
NE2
GLN
52
1
Y
1
A
CG
ASP
92
A
CG
ASP
92
1
Y
1
A
OD1
ASP
92
A
OD1
ASP
92
1
Y
1
A
OD2
ASP
92
A
OD2
ASP
92
1
Y
1
A
CG
LYS
241
A
CG
LYS
241
1
Y
1
A
CD
LYS
241
A
CD
LYS
241
1
Y
1
A
CE
LYS
241
A
CE
LYS
241
1
Y
1
A
NZ
LYS
241
A
NZ
LYS
241
1
Y
1
A
CG
ASP
274
A
CG
ASP
274
1
Y
1
A
OD1
ASP
274
A
OD1
ASP
274
1
Y
1
A
OD2
ASP
274
A
OD2
ASP
274
1
Y
1
A
LEU
4
-106.43
-60.11
1
A
PRO
20
-57.24
-7.88
1
A
GLN
57
-39.39
-36.41
1
A
PRO
108
-99.35
48.96
1
A
SER
126
-163.91
-168.66
1
A
SER
203
-68.58
-166.61
1
A
GLU
218
-67.37
-70.18
0.2610000
0.1680000
0.1710000
0.1710000
2.3
99.0
625
11389
11190
THROUGHOUT
1
2.0
MOLECULAR REPLACEMENT
TNT
2.3
99.0
58
2202
66
0
2078
0.024
2.2
2.3
99.0
1KGT
11389
11389
0.0
0.0
0.0720000
1
99.8
0.3390000
2.3
2.5
1
99.9
refinement
TNT
data reduction
X-GEN
data scaling
XDS
phasing
TNT
Crystal Structure of Tetrahydrodipicolinate N-Succinyltransferase in Complex with Pimelate and Succinyl-CoA
1
N
N
2
N
N
3
N
N
4
N
N
The biological assembly is a trimer generated from the monomer
in the asymmetric unit by the operations: 1-y, x-y, z and
-x+y, 1-x, z.
A
MET
1
A
MET
1
HELX_P
A
ARG
14
A
ARG
14
1
1
14
A
ARG
15
A
ARG
15
HELX_P
A
ILE
18
A
ILE
18
5
2
4
A
ASP
24
A
ASP
24
HELX_P
A
SER
40
A
SER
40
1
3
17
A
HIS
56
A
HIS
56
HELX_P
A
ASN
70
A
ASN
70
1
4
15
A
ASP
94
A
ASP
94
HELX_P
A
GLY
102
A
GLY
102
1
5
9
A
ASP
257
A
ASP
257
HELX_P
A
GLY
265
A
GLY
265
1
6
9
A
ASN
267
A
ASN
267
HELX_P
A
ARG
271
A
ARG
271
5
7
5
TRANSFERASE
LEFT-HANDED PARALLEL BETA HELIX, TRANSFERASE
A
PRO
107
A
PRO
107
1
A
PRO
108
A
PRO
108
1.93
A
GLU
169
A
GLU
169
1
A
PRO
170
A
PRO
170
-0.06
DAPD_MYCBO
UNP
1
1
P56220
MQQLQNVIESAFERRADITPANVDTVTREAVNQVIGLLDSGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNKVMDGAET
RYYDKVPMKFADYDEARFQKEGFRVVPPATVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYLGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS
KDGSYSLYCAVIVKKVDAKTRGKVGINELLRTID
1
274
1KGT
1
274
P56220
A
1
1
274
2
2
10
6
6
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
ALA
46
A
ALA
46
A
ILE
49
A
ILE
49
A
GLN
52
A
GLN
52
A
THR
55
A
THR
55
A
LYS
73
A
LYS
73
A
ASP
76
A
ASP
76
A
ARG
81
A
ARG
81
A
ASP
84
A
ASP
84
A
ARG
104
A
ARG
104
A
VAL
105
A
VAL
105
A
VAL
122
A
VAL
122
A
LEU
123
A
LEU
123
A
MET
139
A
MET
139
A
VAL
140
A
VAL
140
A
HIS
157
A
HIS
157
A
LEU
158
A
LEU
158
A
PHE
183
A
PHE
183
A
ILE
184
A
ILE
184
A
VAL
201
A
VAL
201
A
ILE
202
A
ILE
202
A
SER
231
A
SER
231
A
PRO
239
A
PRO
239
A
SER
246
A
SER
246
A
LYS
255
A
LYS
255
A
ILE
214
A
ILE
214
A
ASP
216
A
ASP
216
A
ILE
222
A
ILE
222
A
HIS
223
A
HIS
223
A
THR
110
A
THR
110
A
VAL
111
A
VAL
111
A
TYR
127
A
TYR
127
A
VAL
128
A
VAL
128
A
THR
145
A
THR
145
A
VAL
146
A
VAL
146
A
GLY
163
A
GLY
163
A
ILE
164
A
ILE
164
A
GLU
189
A
GLU
189
A
VAL
190
A
VAL
190
A
TYR
207
A
TYR
207
A
LEU
208
A
LEU
208
A
PHE
116
A
PHE
116
A
ILE
117
A
ILE
117
A
TYR
133
A
TYR
133
A
VAL
134
A
VAL
134
A
GLN
151
A
GLN
151
A
ILE
152
A
ILE
152
A
ILE
177
A
ILE
177
A
ILE
178
A
ILE
178
A
ILE
195
A
ILE
195
A
VAL
196
A
VAL
196
A
ARG
226
A
ARG
226
A
VAL
227
A
VAL
227
BINDING SITE FOR RESIDUE PML A 301
A
PML
301
Software
13
BINDING SITE FOR RESIDUE SCA A 302
A
SCA
302
Software
25
A
PHE
67
A
PHE
67
13
3_675
A
ARG
104
A
ARG
104
13
1_555
A
ARG
112
A
ARG
112
13
3_675
A
ASN
129
A
ASN
129
13
3_675
A
MET
139
A
MET
139
13
1_555
A
SER
148
A
SER
148
13
3_675
A
GLY
166
A
GLY
166
13
3_675
A
VAL
167
A
VAL
167
13
3_675
A
LEU
168
A
LEU
168
13
3_675
A
GLU
169
A
GLU
169
13
3_675
A
LEU
270
A
LEU
270
13
1_555
A
SCA
302
C
SCA
13
1_555
A
HOH
322
D
HOH
13
3_675
A
ASP
141
A
ASP
141
25
1_555
A
THR
145
A
THR
145
25
3_675
A
SER
159
A
SER
159
25
1_555
A
GLY
163
A
GLY
163
25
3_675
A
ILE
164
A
ILE
164
25
3_675
A
GLY
165
A
GLY
165
25
3_675
A
GLU
169
A
GLU
169
25
3_675
A
GLY
185
A
GLY
185
25
1_555
A
ALA
186
A
ALA
186
25
1_555
A
ARG
187
A
ARG
187
25
1_555
A
GLU
189
A
GLU
189
25
3_675
A
VAL
191
A
VAL
191
25
3_675
A
GLU
192
A
GLU
192
25
3_675
A
SER
203
A
SER
203
25
1_555
A
MET
204
A
MET
204
25
1_555
A
SER
211
A
SER
211
25
3_675
A
ARG
213
A
ARG
213
25
3_675
A
ARG
217
A
ARG
217
25
1_555
A
LYS
254
A
LYS
254
25
1_555
A
LYS
259
A
LYS
259
25
1_555
A
THR
260
A
THR
260
25
1_555
A
LYS
263
A
LYS
263
25
1_555
A
PML
301
B
PML
25
1_555
A
HOH
323
D
HOH
25
3_675
A
HOH
355
D
HOH
25
1_555
146
H 3