0.019915 0.006108 0.008814 0.000000 0.019885 0.002629 0.000000 0.000000 0.019104 0.00000 0.00000 0.00000 Jingzhi, L. Bingdong, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.45 111.73 107.05 50.213 52.600 56.841 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 The Crystal Structure of E. coli Hsp100 ClpB N Terminal Domain, Implication to Peptide Binding Function of ClpB 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2001-02-17 ADSC QUANTUM 4 SAGITALLY FOCUSED Si(III) MAD M x-ray 1 1.01 1.0 0.9785 1.0 0.9781 1.0 0.9556 1.0 14-BM-C APS 1.01, 0.9785, 0.9781, 0.9556 SYNCHROTRON APS BEAMLINE 14-BM-C 15919.484 CLPB PROTEIN N-terminal domain (residues 1-148) 4 man polymer 18.015 water 254 nat water HEAT SHOCK PROTEIN F84.1 no yes (MSE)RLDRLTNKFQLALADAQSLALGHDNQFIEPLHL(MSE)SALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLP QVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQ(MSE)RGGES MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGD VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGES A,B,C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia Escherichia coli sample clpb 562 Escherichia coli 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid pET15b 1 2.08 40.73 VAPOR DIFFUSION, HANGING DROP 7.5 PEG 20K, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 refine struct_conn struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Database references Derived calculations Refinement description 1 0 2002-12-04 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-07-21 _refine.ls_percent_reflns_obs _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details Crystal Structure of the First Nucelotide Binding Domain of ClpB RCSB Y RCSB 2001-12-01 REL REL HOH water TIP 1 2 HOH HOH 149 A TIP 10 2 HOH HOH 150 A TIP 16 2 HOH HOH 151 A TIP 18 2 HOH HOH 152 A TIP 24 2 HOH HOH 153 A TIP 25 2 HOH HOH 154 A TIP 26 2 HOH HOH 155 A TIP 27 2 HOH HOH 156 A TIP 29 2 HOH HOH 157 A TIP 31 2 HOH HOH 158 A TIP 35 2 HOH HOH 159 A TIP 39 2 HOH HOH 160 A TIP 42 2 HOH HOH 161 A TIP 43 2 HOH HOH 162 A TIP 49 2 HOH HOH 163 A TIP 52 2 HOH HOH 164 A TIP 53 2 HOH HOH 165 A TIP 60 2 HOH HOH 166 A TIP 61 2 HOH HOH 167 A TIP 68 2 HOH HOH 168 A TIP 69 2 HOH HOH 169 A TIP 70 2 HOH HOH 170 A TIP 71 2 HOH HOH 171 A TIP 73 2 HOH HOH 172 A TIP 74 2 HOH HOH 173 A TIP 84 2 HOH HOH 174 A TIP 85 2 HOH HOH 175 A TIP 90 2 HOH HOH 176 A TIP 91 2 HOH HOH 177 A TIP 95 2 HOH HOH 178 A TIP 96 2 HOH HOH 179 A TIP 97 2 HOH HOH 180 A TIP 100 2 HOH HOH 181 A TIP 103 2 HOH HOH 182 A TIP 107 2 HOH HOH 183 A TIP 111 2 HOH HOH 184 A TIP 118 2 HOH HOH 185 A TIP 121 2 HOH HOH 186 A TIP 126 2 HOH HOH 187 A TIP 138 2 HOH HOH 188 A TIP 139 2 HOH HOH 189 A TIP 146 2 HOH HOH 190 A TIP 154 2 HOH HOH 191 A TIP 165 2 HOH HOH 192 A TIP 167 2 HOH HOH 193 A TIP 172 2 HOH HOH 194 A TIP 174 2 HOH HOH 195 A TIP 180 2 HOH HOH 196 A TIP 187 2 HOH HOH 197 A TIP 191 2 HOH HOH 198 A TIP 192 2 HOH HOH 199 A TIP 194 2 HOH HOH 200 A TIP 195 2 HOH HOH 201 A TIP 198 2 HOH HOH 202 A TIP 202 2 HOH HOH 203 A TIP 203 2 HOH HOH 204 A TIP 208 2 HOH HOH 205 A TIP 218 2 HOH HOH 206 A TIP 219 2 HOH HOH 207 A TIP 233 2 HOH HOH 208 A TIP 234 2 HOH HOH 209 A TIP 235 2 HOH HOH 210 A TIP 250 2 HOH HOH 211 A TIP 254 2 HOH HOH 212 A TIP 2 2 HOH HOH 149 B TIP 3 2 HOH HOH 150 B TIP 4 2 HOH HOH 151 B TIP 6 2 HOH HOH 152 B TIP 9 2 HOH HOH 153 B TIP 12 2 HOH HOH 154 B TIP 13 2 HOH HOH 155 B TIP 14 2 HOH HOH 156 B TIP 19 2 HOH HOH 157 B TIP 20 2 HOH HOH 158 B TIP 22 2 HOH HOH 159 B TIP 23 2 HOH HOH 160 B TIP 30 2 HOH HOH 161 B TIP 36 2 HOH HOH 162 B TIP 37 2 HOH HOH 163 B TIP 40 2 HOH HOH 164 B TIP 41 2 HOH HOH 165 B TIP 46 2 HOH HOH 166 B TIP 48 2 HOH HOH 167 B TIP 50 2 HOH HOH 168 B TIP 55 2 HOH HOH 169 B TIP 58 2 HOH HOH 170 B TIP 59 2 HOH HOH 171 B TIP 66 2 HOH HOH 172 B TIP 79 2 HOH HOH 173 B TIP 80 2 HOH HOH 174 B TIP 86 2 HOH HOH 175 B TIP 94 2 HOH HOH 176 B TIP 98 2 HOH HOH 177 B TIP 99 2 HOH HOH 178 B TIP 102 2 HOH HOH 179 B TIP 104 2 HOH HOH 180 B TIP 105 2 HOH HOH 181 B TIP 106 2 HOH HOH 182 B TIP 113 2 HOH HOH 183 B TIP 115 2 HOH HOH 184 B TIP 119 2 HOH HOH 185 B TIP 120 2 HOH HOH 186 B TIP 123 2 HOH HOH 187 B TIP 124 2 HOH HOH 188 B TIP 128 2 HOH HOH 189 B TIP 129 2 HOH HOH 190 B TIP 131 2 HOH HOH 191 B TIP 132 2 HOH HOH 192 B TIP 133 2 HOH HOH 193 B TIP 136 2 HOH HOH 194 B TIP 137 2 HOH HOH 195 B TIP 142 2 HOH HOH 196 B TIP 144 2 HOH HOH 197 B TIP 155 2 HOH HOH 198 B TIP 156 2 HOH HOH 199 B TIP 157 2 HOH HOH 200 B TIP 158 2 HOH HOH 201 B TIP 164 2 HOH HOH 202 B TIP 166 2 HOH HOH 203 B TIP 171 2 HOH HOH 204 B TIP 181 2 HOH HOH 205 B TIP 184 2 HOH HOH 206 B TIP 188 2 HOH HOH 207 B TIP 197 2 HOH HOH 208 B TIP 199 2 HOH HOH 209 B TIP 210 2 HOH HOH 210 B TIP 213 2 HOH HOH 211 B TIP 217 2 HOH HOH 212 B TIP 220 2 HOH HOH 213 B TIP 227 2 HOH HOH 214 B TIP 228 2 HOH HOH 215 B TIP 230 2 HOH HOH 216 B TIP 231 2 HOH HOH 217 B TIP 237 2 HOH HOH 218 B TIP 240 2 HOH HOH 219 B TIP 241 2 HOH HOH 220 B TIP 242 2 HOH HOH 221 B TIP 245 2 HOH HOH 222 B TIP 251 2 HOH HOH 223 B TIP 7 2 HOH HOH 149 C TIP 8 2 HOH HOH 150 C TIP 11 2 HOH HOH 151 C TIP 17 2 HOH HOH 152 C TIP 21 2 HOH HOH 153 C TIP 28 2 HOH HOH 154 C TIP 34 2 HOH HOH 155 C TIP 44 2 HOH HOH 156 C TIP 45 2 HOH HOH 157 C TIP 47 2 HOH HOH 158 C TIP 54 2 HOH HOH 159 C TIP 64 2 HOH HOH 160 C TIP 67 2 HOH HOH 161 C TIP 72 2 HOH HOH 162 C TIP 76 2 HOH HOH 163 C TIP 78 2 HOH HOH 164 C TIP 81 2 HOH HOH 165 C TIP 82 2 HOH HOH 166 C TIP 83 2 HOH HOH 167 C TIP 87 2 HOH HOH 168 C TIP 89 2 HOH HOH 169 C TIP 92 2 HOH HOH 170 C TIP 101 2 HOH HOH 171 C TIP 108 2 HOH HOH 172 C TIP 122 2 HOH HOH 173 C TIP 125 2 HOH HOH 174 C TIP 127 2 HOH HOH 175 C TIP 134 2 HOH HOH 176 C TIP 140 2 HOH HOH 177 C TIP 143 2 HOH HOH 178 C TIP 147 2 HOH HOH 179 C TIP 148 2 HOH HOH 180 C TIP 149 2 HOH HOH 181 C TIP 150 2 HOH HOH 182 C TIP 152 2 HOH HOH 183 C TIP 153 2 HOH HOH 184 C TIP 159 2 HOH HOH 185 C TIP 160 2 HOH HOH 186 C TIP 161 2 HOH HOH 187 C TIP 163 2 HOH HOH 188 C TIP 169 2 HOH HOH 189 C TIP 182 2 HOH HOH 190 C TIP 185 2 HOH HOH 191 C TIP 189 2 HOH HOH 192 C TIP 193 2 HOH HOH 193 C TIP 200 2 HOH HOH 194 C TIP 201 2 HOH HOH 195 C TIP 206 2 HOH HOH 196 C TIP 207 2 HOH HOH 197 C TIP 209 2 HOH HOH 198 C TIP 211 2 HOH HOH 199 C TIP 212 2 HOH HOH 200 C TIP 216 2 HOH HOH 201 C TIP 225 2 HOH HOH 202 C TIP 226 2 HOH HOH 203 C TIP 229 2 HOH HOH 204 C TIP 232 2 HOH HOH 205 C TIP 243 2 HOH HOH 206 C TIP 244 2 HOH HOH 207 C TIP 246 2 HOH HOH 208 C TIP 248 2 HOH HOH 209 C TIP 249 2 HOH HOH 210 C TIP 252 2 HOH HOH 211 C TIP 5 2 HOH HOH 149 D TIP 15 2 HOH HOH 150 D TIP 32 2 HOH HOH 151 D TIP 33 2 HOH HOH 152 D TIP 38 2 HOH HOH 153 D TIP 51 2 HOH HOH 154 D TIP 56 2 HOH HOH 155 D TIP 57 2 HOH HOH 156 D TIP 62 2 HOH HOH 157 D TIP 63 2 HOH HOH 158 D TIP 65 2 HOH HOH 159 D TIP 75 2 HOH HOH 160 D TIP 77 2 HOH HOH 161 D TIP 88 2 HOH HOH 162 D TIP 93 2 HOH HOH 163 D TIP 109 2 HOH HOH 164 D TIP 110 2 HOH HOH 165 D TIP 112 2 HOH HOH 166 D TIP 114 2 HOH HOH 167 D TIP 116 2 HOH HOH 168 D TIP 117 2 HOH HOH 169 D TIP 130 2 HOH HOH 170 D TIP 135 2 HOH HOH 171 D TIP 141 2 HOH HOH 172 D TIP 145 2 HOH HOH 173 D TIP 151 2 HOH HOH 174 D TIP 162 2 HOH HOH 175 D TIP 168 2 HOH HOH 176 D TIP 170 2 HOH HOH 177 D TIP 173 2 HOH HOH 178 D TIP 175 2 HOH HOH 179 D TIP 176 2 HOH HOH 180 D TIP 177 2 HOH HOH 181 D TIP 178 2 HOH HOH 182 D TIP 179 2 HOH HOH 183 D TIP 183 2 HOH HOH 184 D TIP 186 2 HOH HOH 185 D TIP 190 2 HOH HOH 186 D TIP 196 2 HOH HOH 187 D TIP 204 2 HOH HOH 188 D TIP 205 2 HOH HOH 189 D TIP 214 2 HOH HOH 190 D TIP 215 2 HOH HOH 191 D TIP 221 2 HOH HOH 192 D TIP 222 2 HOH HOH 193 D TIP 223 2 HOH HOH 194 D TIP 224 2 HOH HOH 195 D TIP 236 2 HOH HOH 196 D TIP 238 2 HOH HOH 197 D TIP 239 2 HOH HOH 198 D TIP 247 2 HOH HOH 199 D TIP 253 2 HOH HOH 200 D n 1 1 A n 2 2 A n 3 3 A ASP 4 n 4 ASP 4 A ARG 5 n 5 ARG 5 A LEU 6 n 6 LEU 6 A THR 7 n 7 THR 7 A ASN 8 n 8 ASN 8 A LYS 9 n 9 LYS 9 A PHE 10 n 10 PHE 10 A GLN 11 n 11 GLN 11 A LEU 12 n 12 LEU 12 A ALA 13 n 13 ALA 13 A LEU 14 n 14 LEU 14 A ALA 15 n 15 ALA 15 A ASP 16 n 16 ASP 16 A ALA 17 n 17 ALA 17 A GLN 18 n 18 GLN 18 A SER 19 n 19 SER 19 A LEU 20 n 20 LEU 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A GLY 23 n 23 GLY 23 A HIS 24 n 24 HIS 24 A ASP 25 n 25 ASP 25 A ASN 26 n 26 ASN 26 A GLN 27 n 27 GLN 27 A PHE 28 n 28 PHE 28 A ILE 29 n 29 ILE 29 A GLU 30 n 30 GLU 30 A PRO 31 n 31 PRO 31 A LEU 32 n 32 LEU 32 A HIS 33 n 33 HIS 33 A LEU 34 n 34 LEU 34 A MSE 35 n 35 MSE 35 A SER 36 n 36 SER 36 A ALA 37 n 37 ALA 37 A LEU 38 n 38 LEU 38 A LEU 39 n 39 LEU 39 A ASN 40 n 40 ASN 40 A GLN 41 n 41 GLN 41 A GLU 42 n 42 GLU 42 A GLY 43 n 43 GLY 43 A GLY 44 n 44 GLY 44 A SER 45 n 45 SER 45 A VAL 46 n 46 VAL 46 A SER 47 n 47 SER 47 A PRO 48 n 48 PRO 48 A LEU 49 n 49 LEU 49 A LEU 50 n 50 LEU 50 A THR 51 n 51 THR 51 A SER 52 n 52 SER 52 A ALA 53 n 53 ALA 53 A GLY 54 n 54 GLY 54 A ILE 55 n 55 ILE 55 A ASN 56 n 56 ASN 56 A ALA 57 n 57 ALA 57 A GLY 58 n 58 GLY 58 A GLN 59 n 59 GLN 59 A LEU 60 n 60 LEU 60 A ARG 61 n 61 ARG 61 A THR 62 n 62 THR 62 A ASP 63 n 63 ASP 63 A ILE 64 n 64 ILE 64 A ASN 65 n 65 ASN 65 A GLN 66 n 66 GLN 66 A ALA 67 n 67 ALA 67 A LEU 68 n 68 LEU 68 A ASN 69 n 69 ASN 69 A ARG 70 n 70 ARG 70 A LEU 71 n 71 LEU 71 A PRO 72 n 72 PRO 72 A GLN 73 n 73 GLN 73 A VAL 74 n 74 VAL 74 A n 75 75 A n 76 76 A n 77 77 A n 78 78 A n 79 79 A n 80 80 A n 81 81 A GLN 82 n 82 GLN 82 A PRO 83 n 83 PRO 83 A SER 84 n 84 SER 84 A GLN 85 n 85 GLN 85 A ASP 86 n 86 ASP 86 A LEU 87 n 87 LEU 87 A VAL 88 n 88 VAL 88 A ARG 89 n 89 ARG 89 A VAL 90 n 90 VAL 90 A LEU 91 n 91 LEU 91 A ASN 92 n 92 ASN 92 A LEU 93 n 93 LEU 93 A CYS 94 n 94 CYS 94 A ASP 95 n 95 ASP 95 A LYS 96 n 96 LYS 96 A LEU 97 n 97 LEU 97 A ALA 98 n 98 ALA 98 A GLN 99 n 99 GLN 99 A LYS 100 n 100 LYS 100 A ARG 101 n 101 ARG 101 A GLY 102 n 102 GLY 102 A ASP 103 n 103 ASP 103 A ASN 104 n 104 ASN 104 A PHE 105 n 105 PHE 105 A ILE 106 n 106 ILE 106 A SER 107 n 107 SER 107 A SER 108 n 108 SER 108 A GLU 109 n 109 GLU 109 A LEU 110 n 110 LEU 110 A PHE 111 n 111 PHE 111 A VAL 112 n 112 VAL 112 A LEU 113 n 113 LEU 113 A ALA 114 n 114 ALA 114 A ALA 115 n 115 ALA 115 A LEU 116 n 116 LEU 116 A GLU 117 n 117 GLU 117 A SER 118 n 118 SER 118 A ARG 119 n 119 ARG 119 A GLY 120 n 120 GLY 120 A THR 121 n 121 THR 121 A LEU 122 n 122 LEU 122 A ALA 123 n 123 ALA 123 A ASP 124 n 124 ASP 124 A ILE 125 n 125 ILE 125 A LEU 126 n 126 LEU 126 A LYS 127 n 127 LYS 127 A ALA 128 n 128 ALA 128 A ALA 129 n 129 ALA 129 A GLY 130 n 130 GLY 130 A ALA 131 n 131 ALA 131 A THR 132 n 132 THR 132 A THR 133 n 133 THR 133 A ALA 134 n 134 ALA 134 A ASN 135 n 135 ASN 135 A ILE 136 n 136 ILE 136 A THR 137 n 137 THR 137 A GLN 138 n 138 GLN 138 A ALA 139 n 139 ALA 139 A ILE 140 n 140 ILE 140 A GLU 141 n 141 GLU 141 A GLN 142 n 142 GLN 142 A n 143 143 A n 144 144 A n 145 145 A n 146 146 A n 147 147 A n 148 148 A n 1 1 B n 2 2 B LEU 3 n 3 LEU 3 B ASP 4 n 4 ASP 4 B ARG 5 n 5 ARG 5 B LEU 6 n 6 LEU 6 B THR 7 n 7 THR 7 B ASN 8 n 8 ASN 8 B LYS 9 n 9 LYS 9 B PHE 10 n 10 PHE 10 B GLN 11 n 11 GLN 11 B LEU 12 n 12 LEU 12 B ALA 13 n 13 ALA 13 B LEU 14 n 14 LEU 14 B ALA 15 n 15 ALA 15 B ASP 16 n 16 ASP 16 B ALA 17 n 17 ALA 17 B GLN 18 n 18 GLN 18 B SER 19 n 19 SER 19 B LEU 20 n 20 LEU 20 B ALA 21 n 21 ALA 21 B LEU 22 n 22 LEU 22 B GLY 23 n 23 GLY 23 B HIS 24 n 24 HIS 24 B ASP 25 n 25 ASP 25 B ASN 26 n 26 ASN 26 B GLN 27 n 27 GLN 27 B PHE 28 n 28 PHE 28 B ILE 29 n 29 ILE 29 B GLU 30 n 30 GLU 30 B PRO 31 n 31 PRO 31 B LEU 32 n 32 LEU 32 B HIS 33 n 33 HIS 33 B LEU 34 n 34 LEU 34 B MSE 35 n 35 MSE 35 B SER 36 n 36 SER 36 B ALA 37 n 37 ALA 37 B LEU 38 n 38 LEU 38 B LEU 39 n 39 LEU 39 B ASN 40 n 40 ASN 40 B GLN 41 n 41 GLN 41 B GLU 42 n 42 GLU 42 B GLY 43 n 43 GLY 43 B GLY 44 n 44 GLY 44 B SER 45 n 45 SER 45 B VAL 46 n 46 VAL 46 B SER 47 n 47 SER 47 B PRO 48 n 48 PRO 48 B LEU 49 n 49 LEU 49 B LEU 50 n 50 LEU 50 B THR 51 n 51 THR 51 B SER 52 n 52 SER 52 B ALA 53 n 53 ALA 53 B GLY 54 n 54 GLY 54 B ILE 55 n 55 ILE 55 B ASN 56 n 56 ASN 56 B ALA 57 n 57 ALA 57 B GLY 58 n 58 GLY 58 B GLN 59 n 59 GLN 59 B LEU 60 n 60 LEU 60 B ARG 61 n 61 ARG 61 B THR 62 n 62 THR 62 B ASP 63 n 63 ASP 63 B ILE 64 n 64 ILE 64 B ASN 65 n 65 ASN 65 B GLN 66 n 66 GLN 66 B ALA 67 n 67 ALA 67 B LEU 68 n 68 LEU 68 B ASN 69 n 69 ASN 69 B ARG 70 n 70 ARG 70 B LEU 71 n 71 LEU 71 B PRO 72 n 72 PRO 72 B GLN 73 n 73 GLN 73 B VAL 74 n 74 VAL 74 B n 75 75 B n 76 76 B n 77 77 B n 78 78 B n 79 79 B n 80 80 B n 81 81 B GLN 82 n 82 GLN 82 B PRO 83 n 83 PRO 83 B SER 84 n 84 SER 84 B GLN 85 n 85 GLN 85 B ASP 86 n 86 ASP 86 B LEU 87 n 87 LEU 87 B VAL 88 n 88 VAL 88 B ARG 89 n 89 ARG 89 B VAL 90 n 90 VAL 90 B LEU 91 n 91 LEU 91 B ASN 92 n 92 ASN 92 B LEU 93 n 93 LEU 93 B CYS 94 n 94 CYS 94 B ASP 95 n 95 ASP 95 B LYS 96 n 96 LYS 96 B LEU 97 n 97 LEU 97 B ALA 98 n 98 ALA 98 B GLN 99 n 99 GLN 99 B LYS 100 n 100 LYS 100 B ARG 101 n 101 ARG 101 B GLY 102 n 102 GLY 102 B ASP 103 n 103 ASP 103 B ASN 104 n 104 ASN 104 B PHE 105 n 105 PHE 105 B ILE 106 n 106 ILE 106 B SER 107 n 107 SER 107 B SER 108 n 108 SER 108 B GLU 109 n 109 GLU 109 B LEU 110 n 110 LEU 110 B PHE 111 n 111 PHE 111 B VAL 112 n 112 VAL 112 B LEU 113 n 113 LEU 113 B ALA 114 n 114 ALA 114 B ALA 115 n 115 ALA 115 B LEU 116 n 116 LEU 116 B GLU 117 n 117 GLU 117 B SER 118 n 118 SER 118 B ARG 119 n 119 ARG 119 B GLY 120 n 120 GLY 120 B THR 121 n 121 THR 121 B LEU 122 n 122 LEU 122 B ALA 123 n 123 ALA 123 B ASP 124 n 124 ASP 124 B ILE 125 n 125 ILE 125 B LEU 126 n 126 LEU 126 B LYS 127 n 127 LYS 127 B ALA 128 n 128 ALA 128 B ALA 129 n 129 ALA 129 B GLY 130 n 130 GLY 130 B ALA 131 n 131 ALA 131 B THR 132 n 132 THR 132 B THR 133 n 133 THR 133 B ALA 134 n 134 ALA 134 B ASN 135 n 135 ASN 135 B ILE 136 n 136 ILE 136 B THR 137 n 137 THR 137 B GLN 138 n 138 GLN 138 B ALA 139 n 139 ALA 139 B ILE 140 n 140 ILE 140 B GLU 141 n 141 GLU 141 B GLN 142 n 142 GLN 142 B n 143 143 B n 144 144 B n 145 145 B n 146 146 B n 147 147 B n 148 148 B n 1 1 C n 2 2 C n 3 3 C ASP 4 n 4 ASP 4 C ARG 5 n 5 ARG 5 C LEU 6 n 6 LEU 6 C THR 7 n 7 THR 7 C ASN 8 n 8 ASN 8 C LYS 9 n 9 LYS 9 C PHE 10 n 10 PHE 10 C GLN 11 n 11 GLN 11 C LEU 12 n 12 LEU 12 C ALA 13 n 13 ALA 13 C LEU 14 n 14 LEU 14 C ALA 15 n 15 ALA 15 C ASP 16 n 16 ASP 16 C ALA 17 n 17 ALA 17 C GLN 18 n 18 GLN 18 C SER 19 n 19 SER 19 C LEU 20 n 20 LEU 20 C ALA 21 n 21 ALA 21 C LEU 22 n 22 LEU 22 C GLY 23 n 23 GLY 23 C HIS 24 n 24 HIS 24 C ASP 25 n 25 ASP 25 C ASN 26 n 26 ASN 26 C GLN 27 n 27 GLN 27 C PHE 28 n 28 PHE 28 C ILE 29 n 29 ILE 29 C GLU 30 n 30 GLU 30 C PRO 31 n 31 PRO 31 C LEU 32 n 32 LEU 32 C HIS 33 n 33 HIS 33 C LEU 34 n 34 LEU 34 C MSE 35 n 35 MSE 35 C SER 36 n 36 SER 36 C ALA 37 n 37 ALA 37 C LEU 38 n 38 LEU 38 C LEU 39 n 39 LEU 39 C ASN 40 n 40 ASN 40 C GLN 41 n 41 GLN 41 C GLU 42 n 42 GLU 42 C GLY 43 n 43 GLY 43 C GLY 44 n 44 GLY 44 C SER 45 n 45 SER 45 C VAL 46 n 46 VAL 46 C SER 47 n 47 SER 47 C PRO 48 n 48 PRO 48 C LEU 49 n 49 LEU 49 C LEU 50 n 50 LEU 50 C THR 51 n 51 THR 51 C SER 52 n 52 SER 52 C ALA 53 n 53 ALA 53 C GLY 54 n 54 GLY 54 C ILE 55 n 55 ILE 55 C ASN 56 n 56 ASN 56 C ALA 57 n 57 ALA 57 C GLY 58 n 58 GLY 58 C GLN 59 n 59 GLN 59 C LEU 60 n 60 LEU 60 C ARG 61 n 61 ARG 61 C THR 62 n 62 THR 62 C ASP 63 n 63 ASP 63 C ILE 64 n 64 ILE 64 C ASN 65 n 65 ASN 65 C GLN 66 n 66 GLN 66 C ALA 67 n 67 ALA 67 C LEU 68 n 68 LEU 68 C ASN 69 n 69 ASN 69 C ARG 70 n 70 ARG 70 C LEU 71 n 71 LEU 71 C PRO 72 n 72 PRO 72 C GLN 73 n 73 GLN 73 C VAL 74 n 74 VAL 74 C n 75 75 C n 76 76 C n 77 77 C n 78 78 C n 79 79 C ASP 80 n 80 ASP 80 C VAL 81 n 81 VAL 81 C GLN 82 n 82 GLN 82 C PRO 83 n 83 PRO 83 C SER 84 n 84 SER 84 C GLN 85 n 85 GLN 85 C ASP 86 n 86 ASP 86 C LEU 87 n 87 LEU 87 C VAL 88 n 88 VAL 88 C ARG 89 n 89 ARG 89 C VAL 90 n 90 VAL 90 C LEU 91 n 91 LEU 91 C ASN 92 n 92 ASN 92 C LEU 93 n 93 LEU 93 C CYS 94 n 94 CYS 94 C ASP 95 n 95 ASP 95 C LYS 96 n 96 LYS 96 C LEU 97 n 97 LEU 97 C ALA 98 n 98 ALA 98 C GLN 99 n 99 GLN 99 C LYS 100 n 100 LYS 100 C ARG 101 n 101 ARG 101 C GLY 102 n 102 GLY 102 C ASP 103 n 103 ASP 103 C ASN 104 n 104 ASN 104 C PHE 105 n 105 PHE 105 C ILE 106 n 106 ILE 106 C SER 107 n 107 SER 107 C SER 108 n 108 SER 108 C GLU 109 n 109 GLU 109 C LEU 110 n 110 LEU 110 C PHE 111 n 111 PHE 111 C VAL 112 n 112 VAL 112 C LEU 113 n 113 LEU 113 C ALA 114 n 114 ALA 114 C ALA 115 n 115 ALA 115 C LEU 116 n 116 LEU 116 C GLU 117 n 117 GLU 117 C SER 118 n 118 SER 118 C ARG 119 n 119 ARG 119 C GLY 120 n 120 GLY 120 C THR 121 n 121 THR 121 C LEU 122 n 122 LEU 122 C ALA 123 n 123 ALA 123 C ASP 124 n 124 ASP 124 C ILE 125 n 125 ILE 125 C LEU 126 n 126 LEU 126 C LYS 127 n 127 LYS 127 C ALA 128 n 128 ALA 128 C ALA 129 n 129 ALA 129 C GLY 130 n 130 GLY 130 C ALA 131 n 131 ALA 131 C THR 132 n 132 THR 132 C THR 133 n 133 THR 133 C ALA 134 n 134 ALA 134 C ASN 135 n 135 ASN 135 C ILE 136 n 136 ILE 136 C THR 137 n 137 THR 137 C GLN 138 n 138 GLN 138 C ALA 139 n 139 ALA 139 C ILE 140 n 140 ILE 140 C GLU 141 n 141 GLU 141 C GLN 142 n 142 GLN 142 C MSE 143 n 143 MSE 143 C n 144 144 C n 145 145 C n 146 146 C n 147 147 C n 148 148 C n 1 1 D n 2 2 D n 3 3 D ASP 4 n 4 ASP 4 D ARG 5 n 5 ARG 5 D LEU 6 n 6 LEU 6 D THR 7 n 7 THR 7 D ASN 8 n 8 ASN 8 D LYS 9 n 9 LYS 9 D PHE 10 n 10 PHE 10 D GLN 11 n 11 GLN 11 D LEU 12 n 12 LEU 12 D ALA 13 n 13 ALA 13 D LEU 14 n 14 LEU 14 D ALA 15 n 15 ALA 15 D ASP 16 n 16 ASP 16 D ALA 17 n 17 ALA 17 D GLN 18 n 18 GLN 18 D SER 19 n 19 SER 19 D LEU 20 n 20 LEU 20 D ALA 21 n 21 ALA 21 D LEU 22 n 22 LEU 22 D GLY 23 n 23 GLY 23 D HIS 24 n 24 HIS 24 D ASP 25 n 25 ASP 25 D ASN 26 n 26 ASN 26 D GLN 27 n 27 GLN 27 D PHE 28 n 28 PHE 28 D ILE 29 n 29 ILE 29 D GLU 30 n 30 GLU 30 D PRO 31 n 31 PRO 31 D LEU 32 n 32 LEU 32 D HIS 33 n 33 HIS 33 D LEU 34 n 34 LEU 34 D MSE 35 n 35 MSE 35 D SER 36 n 36 SER 36 D ALA 37 n 37 ALA 37 D LEU 38 n 38 LEU 38 D LEU 39 n 39 LEU 39 D ASN 40 n 40 ASN 40 D GLN 41 n 41 GLN 41 D GLU 42 n 42 GLU 42 D GLY 43 n 43 GLY 43 D GLY 44 n 44 GLY 44 D SER 45 n 45 SER 45 D VAL 46 n 46 VAL 46 D SER 47 n 47 SER 47 D PRO 48 n 48 PRO 48 D LEU 49 n 49 LEU 49 D LEU 50 n 50 LEU 50 D THR 51 n 51 THR 51 D SER 52 n 52 SER 52 D ALA 53 n 53 ALA 53 D GLY 54 n 54 GLY 54 D ILE 55 n 55 ILE 55 D ASN 56 n 56 ASN 56 D ALA 57 n 57 ALA 57 D GLY 58 n 58 GLY 58 D GLN 59 n 59 GLN 59 D LEU 60 n 60 LEU 60 D ARG 61 n 61 ARG 61 D THR 62 n 62 THR 62 D ASP 63 n 63 ASP 63 D ILE 64 n 64 ILE 64 D ASN 65 n 65 ASN 65 D GLN 66 n 66 GLN 66 D ALA 67 n 67 ALA 67 D LEU 68 n 68 LEU 68 D ASN 69 n 69 ASN 69 D ARG 70 n 70 ARG 70 D LEU 71 n 71 LEU 71 D PRO 72 n 72 PRO 72 D GLN 73 n 73 GLN 73 D VAL 74 n 74 VAL 74 D GLU 75 n 75 GLU 75 D GLY 76 n 76 GLY 76 D THR 77 n 77 THR 77 D GLY 78 n 78 GLY 78 D GLY 79 n 79 GLY 79 D ASP 80 n 80 ASP 80 D VAL 81 n 81 VAL 81 D GLN 82 n 82 GLN 82 D PRO 83 n 83 PRO 83 D SER 84 n 84 SER 84 D GLN 85 n 85 GLN 85 D ASP 86 n 86 ASP 86 D LEU 87 n 87 LEU 87 D VAL 88 n 88 VAL 88 D ARG 89 n 89 ARG 89 D VAL 90 n 90 VAL 90 D LEU 91 n 91 LEU 91 D ASN 92 n 92 ASN 92 D LEU 93 n 93 LEU 93 D CYS 94 n 94 CYS 94 D ASP 95 n 95 ASP 95 D LYS 96 n 96 LYS 96 D LEU 97 n 97 LEU 97 D ALA 98 n 98 ALA 98 D GLN 99 n 99 GLN 99 D LYS 100 n 100 LYS 100 D ARG 101 n 101 ARG 101 D GLY 102 n 102 GLY 102 D ASP 103 n 103 ASP 103 D ASN 104 n 104 ASN 104 D PHE 105 n 105 PHE 105 D ILE 106 n 106 ILE 106 D SER 107 n 107 SER 107 D SER 108 n 108 SER 108 D GLU 109 n 109 GLU 109 D LEU 110 n 110 LEU 110 D PHE 111 n 111 PHE 111 D VAL 112 n 112 VAL 112 D LEU 113 n 113 LEU 113 D ALA 114 n 114 ALA 114 D ALA 115 n 115 ALA 115 D LEU 116 n 116 LEU 116 D GLU 117 n 117 GLU 117 D SER 118 n 118 SER 118 D ARG 119 n 119 ARG 119 D GLY 120 n 120 GLY 120 D THR 121 n 121 THR 121 D LEU 122 n 122 LEU 122 D ALA 123 n 123 ALA 123 D ASP 124 n 124 ASP 124 D ILE 125 n 125 ILE 125 D LEU 126 n 126 LEU 126 D LYS 127 n 127 LYS 127 D ALA 128 n 128 ALA 128 D ALA 129 n 129 ALA 129 D GLY 130 n 130 GLY 130 D ALA 131 n 131 ALA 131 D THR 132 n 132 THR 132 D THR 133 n 133 THR 133 D ALA 134 n 134 ALA 134 D ASN 135 n 135 ASN 135 D ILE 136 n 136 ILE 136 D THR 137 n 137 THR 137 D GLN 138 n 138 GLN 138 D ALA 139 n 139 ALA 139 D ILE 140 n 140 ILE 140 D GLU 141 n 141 GLU 141 D GLU 142 n 142 GLN 142 D MSE 143 n 143 MSE 143 D n 144 144 D n 145 145 D n 146 146 D n 147 147 D n 148 148 D author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric A MSE 35 SELENOMETHIONINE A MSE 35 MET B MSE 35 SELENOMETHIONINE B MSE 35 MET C MSE 35 SELENOMETHIONINE C MSE 35 MET C MSE 143 SELENOMETHIONINE C MSE 143 MET D MSE 35 SELENOMETHIONINE D MSE 35 MET D MSE 143 SELENOMETHIONINE D MSE 143 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C N ILE 29 C N ILE 29 C O GLN 82 C O GLN 82 D N ARG 5 D N ARG 5 D O ILE 106 D O ILE 106 D N ILE 29 D N ILE 29 D O GLN 82 D O GLN 82 1 A MSE 1 A MSE 1 1 Y 1 A ARG 2 A ARG 2 1 Y 1 A LEU 3 A LEU 3 1 Y 1 A GLU 75 A GLU 75 1 Y 1 A GLY 76 A GLY 76 1 Y 1 A THR 77 A THR 77 1 Y 1 A GLY 78 A GLY 78 1 Y 1 A GLY 79 A GLY 79 1 Y 1 A ASP 80 A ASP 80 1 Y 1 A VAL 81 A VAL 81 1 Y 1 A MSE 143 A MSE 143 1 Y 1 A ARG 144 A ARG 144 1 Y 1 A GLY 145 A GLY 145 1 Y 1 A GLY 146 A GLY 146 1 Y 1 A GLU 147 A GLU 147 1 Y 1 A SER 148 A SER 148 1 Y 1 B MSE 1 B MSE 1 1 Y 1 B ARG 2 B ARG 2 1 Y 1 B GLU 75 B GLU 75 1 Y 1 B GLY 76 B GLY 76 1 Y 1 B THR 77 B THR 77 1 Y 1 B GLY 78 B GLY 78 1 Y 1 B GLY 79 B GLY 79 1 Y 1 B ASP 80 B ASP 80 1 Y 1 B VAL 81 B VAL 81 1 Y 1 B MSE 143 B MSE 143 1 Y 1 B ARG 144 B ARG 144 1 Y 1 B GLY 145 B GLY 145 1 Y 1 B GLY 146 B GLY 146 1 Y 1 B GLU 147 B GLU 147 1 Y 1 B SER 148 B SER 148 1 Y 1 C MSE 1 C MSE 1 1 Y 1 C ARG 2 C ARG 2 1 Y 1 C LEU 3 C LEU 3 1 Y 1 C GLU 75 C GLU 75 1 Y 1 C GLY 76 C GLY 76 1 Y 1 C THR 77 C THR 77 1 Y 1 C GLY 78 C GLY 78 1 Y 1 C GLY 79 C GLY 79 1 Y 1 C ARG 144 C ARG 144 1 Y 1 C GLY 145 C GLY 145 1 Y 1 C GLY 146 C GLY 146 1 Y 1 C GLU 147 C GLU 147 1 Y 1 C SER 148 C SER 148 1 Y 1 D MSE 1 D MSE 1 1 Y 1 D ARG 2 D ARG 2 1 Y 1 D LEU 3 D LEU 3 1 Y 1 D ARG 144 D ARG 144 1 Y 1 D GLY 145 D GLY 145 1 Y 1 D GLY 146 D GLY 146 1 Y 1 D GLU 147 D GLU 147 1 Y 1 D SER 148 D SER 148 1 Y 1 C C NE2 OE1 GLN GLN 138 142 2.13 1 A ARG 119 54.93 -175.67 1 B ARG 119 55.04 -170.21 1 D ARG 119 58.37 99.16 1 D GLN 142 -75.99 25.65 protein_rep.param ion.param water_rep.param 20 0.28 0.18 1.66 1.34 2.28 -1.62 Used weighted full matrix least squares procedure 0.259 0.222 0.226 0.226 1.95 30 3584 35923 35923 90.6 random 1 Isotropic THROUGHOUT 0 0 MAD Engh & Huber 0.26 0.23 5.00 0.16 0.06 1.95 30 254 4304 0 0 4050 0.005 1.1 0.77 17.5 0.259 0.004 0.222 2.07 3584 35923 96.4 16 1.95 30 1KHY 35923 35923 0 0 0.05 1 24.4 1.6 0.128 1.95 2.04 11.2 0.128 2.0 93.9 data reduction DENZO data scaling SCALEPACK phasing SOLVE refinement CNS 1.0 The Crystal Structure of ClpB N Terminal Domain, Implication to the Peptide Binding Function of ClpB 1 N N 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N A THR 7 A THR 7 HELX_P A HIS 24 A HIS 24 1 1 18 A GLU 30 A GLU 30 HELX_P A ASN 40 A ASN 40 1 2 11 A SER 45 A SER 45 HELX_P A GLY 54 A GLY 54 1 3 10 A ASN 56 A ASN 56 HELX_P A ASN 69 A ASN 69 1 4 14 A SER 84 A SER 84 HELX_P A GLY 102 A GLY 102 1 5 19 A SER 107 A SER 107 HELX_P A GLU 117 A GLU 117 1 6 11 A ARG 119 A ARG 119 HELX_P A ALA 129 A ALA 129 1 7 11 A THR 132 A THR 132 HELX_P A GLN 142 A GLN 142 1 8 11 B THR 7 B THR 7 HELX_P B HIS 24 B HIS 24 1 9 18 B GLU 30 B GLU 30 HELX_P B ASN 40 B ASN 40 1 10 11 B SER 45 B SER 45 HELX_P B ALA 53 B ALA 53 1 11 9 B ASN 56 B ASN 56 HELX_P B LEU 71 B LEU 71 1 12 16 B SER 84 B SER 84 HELX_P B GLY 102 B GLY 102 1 13 19 B SER 107 B SER 107 HELX_P B GLU 117 B GLU 117 1 14 11 B ARG 119 B ARG 119 HELX_P B GLY 130 B GLY 130 1 15 12 B THR 132 B THR 132 HELX_P B GLN 142 B GLN 142 1 16 11 C THR 7 C THR 7 HELX_P C GLY 23 C GLY 23 1 17 17 C GLU 30 C GLU 30 HELX_P C ASN 40 C ASN 40 1 18 11 C SER 45 C SER 45 HELX_P C GLY 54 C GLY 54 1 19 10 C ASN 56 C ASN 56 HELX_P C LEU 71 C LEU 71 1 20 16 C SER 84 C SER 84 HELX_P C GLY 102 C GLY 102 1 21 19 C SER 107 C SER 107 HELX_P C SER 118 C SER 118 1 22 12 C GLY 120 C GLY 120 HELX_P C ALA 129 C ALA 129 1 23 10 C THR 132 C THR 132 HELX_P C MSE 143 C MSE 143 1 24 12 D THR 7 D THR 7 HELX_P D GLY 23 D GLY 23 1 25 17 D GLU 30 D GLU 30 HELX_P D ASN 40 D ASN 40 1 26 11 D SER 45 D SER 45 HELX_P D ALA 53 D ALA 53 1 27 9 D ASN 56 D ASN 56 HELX_P D ASN 69 D ASN 69 1 28 14 D SER 84 D SER 84 HELX_P D GLY 102 D GLY 102 1 29 19 D SER 107 D SER 107 HELX_P D ARG 119 D ARG 119 1 30 13 D GLY 120 D GLY 120 HELX_P D ALA 129 D ALA 129 1 31 10 D THR 132 D THR 132 HELX_P D GLN 142 D GLN 142 1 32 11 covale 1.332 both A LEU 34 A C LEU 34 1_555 A MSE 35 A N MSE 35 1_555 covale 1.328 both A MSE 35 A C MSE 35 1_555 A SER 36 A N SER 36 1_555 covale 1.331 both B LEU 34 B C LEU 34 1_555 B MSE 35 B N MSE 35 1_555 covale 1.329 both B MSE 35 B C MSE 35 1_555 B SER 36 B N SER 36 1_555 covale 1.333 both C LEU 34 C C LEU 34 1_555 C MSE 35 C N MSE 35 1_555 covale 1.328 both C MSE 35 C C MSE 35 1_555 C SER 36 C N SER 36 1_555 covale 1.328 both C GLN 142 C C GLN 142 1_555 C MSE 143 C N MSE 143 1_555 covale 1.328 both D LEU 34 D C LEU 34 1_555 D MSE 35 D N MSE 35 1_555 covale 1.330 both D MSE 35 D C MSE 35 1_555 D SER 36 D N SER 36 1_555 covale 1.332 both D GLN 142 D C GLN 142 1_555 D MSE 143 D N MSE 143 1_555 CHAPERONE alpha helix, CHAPERONE CLPB_ECOLI UNP 1 1 P63284 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGD VQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGES 1 148 1KHY 1 148 P63284 A 1 1 148 1 148 1KHY 1 148 P63284 B 1 1 148 1 148 1KHY 1 148 P63284 C 1 1 148 1 148 1KHY 1 148 P63284 D 1 1 148 1 MET modified residue MSE 1 1KHY A P63284 UNP 1 1 1 MET modified residue MSE 35 1KHY A P63284 UNP 35 35 1 MET modified residue MSE 143 1KHY A P63284 UNP 143 143 2 MET modified residue MSE 1 1KHY B P63284 UNP 1 1 2 MET modified residue MSE 35 1KHY B P63284 UNP 35 35 2 MET modified residue MSE 143 1KHY B P63284 UNP 143 143 3 MET modified residue MSE 1 1KHY C P63284 UNP 1 1 3 MET modified residue MSE 35 1KHY C P63284 UNP 35 35 3 MET modified residue MSE 143 1KHY C P63284 UNP 143 143 4 MET modified residue MSE 1 1KHY D P63284 UNP 1 1 4 MET modified residue MSE 35 1KHY D P63284 UNP 35 35 4 MET modified residue MSE 143 1KHY D P63284 UNP 143 143 2 2 2 parallel parallel parallel C PHE 28 C PHE 28 C ILE 29 C ILE 29 C GLN 82 C GLN 82 C PRO 83 C PRO 83 D ARG 5 D ARG 5 D LEU 6 D LEU 6 D PHE 105 D PHE 105 D ILE 106 D ILE 106 D PHE 28 D PHE 28 D ILE 29 D ILE 29 D GLN 82 D GLN 82 D PRO 83 D PRO 83 1 P 1