0.011574
0.000000
0.000000
0.000000
0.011574
0.000000
0.000000
0.000000
0.011574
0.00000
0.00000
0.00000
CIS PROLINE - PRO 447
Xia, D.
Henry, L.J.
Gerard, R.D.
Deisenhofer, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
86.400
86.400
86.400
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
Structure
STRUE6
2005
0969-2126
2
1259
1270
10.1016/S0969-2126(94)00126-X
7704534
Crystal structure of the receptor-binding domain of adenovirus type 5 fiber protein at 1.7 A resolution.
1994
US
J.Virol.
JOVIAM
0825
0022-538X
68
5239
Characterization of the Knob Domain of the Adenovirus Type 5 Fiber Protein Expressed in Escherichia Coli
1994
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
215
589
Structure of Adenovirus Fiber: Morphology of Single Fibers
1994
10.2210/pdb1knb/pdb
pdb_00001knb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
21256.695
ADENOVIRUS TYPE 5 FIBER PROTEIN
1
man
polymer
18.015
water
145
nat
water
no
no
TGAITVGNKNNDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILATVSVLAVKGSLAPISGTVQSAHLIIRFDENG
VLLNNSFLDPEYWNFRNGDLTEGTAYTNAVGFMPNLSAYPKSHGKTAKSNIVSQVYLNGDKTKPVTLTITLNGTQETGDT
TPSAYSMSFSWDWSGHNYINEIFATSSYTFSYIAQE
TGAITVGNKNNDKLTLWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILATVSVLAVKGSLAPISGTVQSAHLIIRFDENG
VLLNNSFLDPEYWNFRNGDLTEGTAYTNAVGFMPNLSAYPKSHGKTAKSNIVSQVYLNGDKTKPVTLTITLNGTQETGDT
TPSAYSMSFSWDWSGHNYINEIFATSSYTFSYIAQE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mastadenovirus
Human adenovirus C
Escherichia
sample
28285
Human adenovirus 5
562
Escherichia coli
2.53
51.33
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Other
1
0
1995-03-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1995-01-06
REL
HOH
water
HOH
582
2
HOH
HOH
582
A
HOH
583
2
HOH
HOH
583
A
HOH
584
2
HOH
HOH
584
A
HOH
585
2
HOH
HOH
585
A
HOH
586
2
HOH
HOH
586
A
HOH
587
2
HOH
HOH
587
A
HOH
588
2
HOH
HOH
588
A
HOH
589
2
HOH
HOH
589
A
HOH
590
2
HOH
HOH
590
A
HOH
591
2
HOH
HOH
591
A
HOH
592
2
HOH
HOH
592
A
HOH
593
2
HOH
HOH
593
A
HOH
594
2
HOH
HOH
594
A
HOH
595
2
HOH
HOH
595
A
HOH
596
2
HOH
HOH
596
A
HOH
597
2
HOH
HOH
597
A
HOH
598
2
HOH
HOH
598
A
HOH
599
2
HOH
HOH
599
A
HOH
600
2
HOH
HOH
600
A
HOH
601
2
HOH
HOH
601
A
HOH
602
2
HOH
HOH
602
A
HOH
603
2
HOH
HOH
603
A
HOH
604
2
HOH
HOH
604
A
HOH
605
2
HOH
HOH
605
A
HOH
606
2
HOH
HOH
606
A
HOH
607
2
HOH
HOH
607
A
HOH
608
2
HOH
HOH
608
A
HOH
609
2
HOH
HOH
609
A
HOH
610
2
HOH
HOH
610
A
HOH
611
2
HOH
HOH
611
A
HOH
612
2
HOH
HOH
612
A
HOH
613
2
HOH
HOH
613
A
HOH
614
2
HOH
HOH
614
A
HOH
615
2
HOH
HOH
615
A
HOH
616
2
HOH
HOH
616
A
HOH
617
2
HOH
HOH
617
A
HOH
618
2
HOH
HOH
618
A
HOH
619
2
HOH
HOH
619
A
HOH
620
2
HOH
HOH
620
A
HOH
621
2
HOH
HOH
621
A
HOH
622
2
HOH
HOH
622
A
HOH
623
2
HOH
HOH
623
A
HOH
624
2
HOH
HOH
624
A
HOH
625
2
HOH
HOH
625
A
HOH
626
2
HOH
HOH
626
A
HOH
627
2
HOH
HOH
627
A
HOH
628
2
HOH
HOH
628
A
HOH
629
2
HOH
HOH
629
A
HOH
630
2
HOH
HOH
630
A
HOH
631
2
HOH
HOH
631
A
HOH
632
2
HOH
HOH
632
A
HOH
633
2
HOH
HOH
633
A
HOH
634
2
HOH
HOH
634
A
HOH
635
2
HOH
HOH
635
A
HOH
636
2
HOH
HOH
636
A
HOH
637
2
HOH
HOH
637
A
HOH
638
2
HOH
HOH
638
A
HOH
639
2
HOH
HOH
639
A
HOH
640
2
HOH
HOH
640
A
HOH
641
2
HOH
HOH
641
A
HOH
642
2
HOH
HOH
642
A
HOH
643
2
HOH
HOH
643
A
HOH
644
2
HOH
HOH
644
A
HOH
645
2
HOH
HOH
645
A
HOH
646
2
HOH
HOH
646
A
HOH
647
2
HOH
HOH
647
A
HOH
648
2
HOH
HOH
648
A
HOH
649
2
HOH
HOH
649
A
HOH
650
2
HOH
HOH
650
A
HOH
651
2
HOH
HOH
651
A
HOH
652
2
HOH
HOH
652
A
HOH
653
2
HOH
HOH
653
A
HOH
654
2
HOH
HOH
654
A
HOH
655
2
HOH
HOH
655
A
HOH
656
2
HOH
HOH
656
A
HOH
657
2
HOH
HOH
657
A
HOH
658
2
HOH
HOH
658
A
HOH
659
2
HOH
HOH
659
A
HOH
660
2
HOH
HOH
660
A
HOH
661
2
HOH
HOH
661
A
HOH
662
2
HOH
HOH
662
A
HOH
663
2
HOH
HOH
663
A
HOH
664
2
HOH
HOH
664
A
HOH
665
2
HOH
HOH
665
A
HOH
666
2
HOH
HOH
666
A
HOH
667
2
HOH
HOH
667
A
HOH
668
2
HOH
HOH
668
A
HOH
669
2
HOH
HOH
669
A
HOH
670
2
HOH
HOH
670
A
HOH
671
2
HOH
HOH
671
A
HOH
672
2
HOH
HOH
672
A
HOH
673
2
HOH
HOH
673
A
HOH
674
2
HOH
HOH
674
A
HOH
675
2
HOH
HOH
675
A
HOH
676
2
HOH
HOH
676
A
HOH
677
2
HOH
HOH
677
A
HOH
678
2
HOH
HOH
678
A
HOH
679
2
HOH
HOH
679
A
HOH
680
2
HOH
HOH
680
A
HOH
681
2
HOH
HOH
681
A
HOH
682
2
HOH
HOH
682
A
HOH
683
2
HOH
HOH
683
A
HOH
684
2
HOH
HOH
684
A
HOH
685
2
HOH
HOH
685
A
HOH
686
2
HOH
HOH
686
A
HOH
687
2
HOH
HOH
687
A
HOH
688
2
HOH
HOH
688
A
HOH
689
2
HOH
HOH
689
A
HOH
690
2
HOH
HOH
690
A
HOH
691
2
HOH
HOH
691
A
HOH
692
2
HOH
HOH
692
A
HOH
693
2
HOH
HOH
693
A
HOH
694
2
HOH
HOH
694
A
HOH
695
2
HOH
HOH
695
A
HOH
696
2
HOH
HOH
696
A
HOH
697
2
HOH
HOH
697
A
HOH
698
2
HOH
HOH
698
A
HOH
699
2
HOH
HOH
699
A
HOH
700
2
HOH
HOH
700
A
HOH
701
2
HOH
HOH
701
A
HOH
702
2
HOH
HOH
702
A
HOH
703
2
HOH
HOH
703
A
HOH
704
2
HOH
HOH
704
A
HOH
705
2
HOH
HOH
705
A
HOH
706
2
HOH
HOH
706
A
HOH
707
2
HOH
HOH
707
A
HOH
708
2
HOH
HOH
708
A
HOH
709
2
HOH
HOH
709
A
HOH
710
2
HOH
HOH
710
A
HOH
711
2
HOH
HOH
711
A
HOH
712
2
HOH
HOH
712
A
HOH
713
2
HOH
HOH
713
A
HOH
714
2
HOH
HOH
714
A
HOH
715
2
HOH
HOH
715
A
HOH
716
2
HOH
HOH
716
A
HOH
717
2
HOH
HOH
717
A
HOH
718
2
HOH
HOH
718
A
HOH
719
2
HOH
HOH
719
A
HOH
720
2
HOH
HOH
720
A
HOH
721
2
HOH
HOH
721
A
HOH
722
2
HOH
HOH
722
A
HOH
723
2
HOH
HOH
723
A
HOH
724
2
HOH
HOH
724
A
HOH
725
2
HOH
HOH
725
A
HOH
726
2
HOH
HOH
726
A
n
1
386
A
n
2
387
A
n
3
388
A
n
4
389
A
n
5
390
A
n
6
391
A
n
7
392
A
n
8
393
A
n
9
394
A
n
10
395
A
ASN
396
n
11
ASN
396
A
ASP
397
n
12
ASP
397
A
LYS
398
n
13
LYS
398
A
LEU
399
n
14
LEU
399
A
THR
400
n
15
THR
400
A
LEU
401
n
16
LEU
401
A
TRP
402
n
17
TRP
402
A
THR
403
n
18
THR
403
A
THR
404
n
19
THR
404
A
PRO
405
n
20
PRO
405
A
ALA
406
n
21
ALA
406
A
PRO
407
n
22
PRO
407
A
SER
408
n
23
SER
408
A
PRO
409
n
24
PRO
409
A
ASN
410
n
25
ASN
410
A
CYS
411
n
26
CYS
411
A
ARG
412
n
27
ARG
412
A
LEU
413
n
28
LEU
413
A
ASN
414
n
29
ASN
414
A
ALA
415
n
30
ALA
415
A
GLU
416
n
31
GLU
416
A
LYS
417
n
32
LYS
417
A
ASP
418
n
33
ASP
418
A
ALA
419
n
34
ALA
419
A
LYS
420
n
35
LYS
420
A
LEU
421
n
36
LEU
421
A
THR
422
n
37
THR
422
A
LEU
423
n
38
LEU
423
A
VAL
424
n
39
VAL
424
A
LEU
425
n
40
LEU
425
A
THR
426
n
41
THR
426
A
LYS
427
n
42
LYS
427
A
CYS
428
n
43
CYS
428
A
GLY
429
n
44
GLY
429
A
SER
430
n
45
SER
430
A
GLN
431
n
46
GLN
431
A
ILE
432
n
47
ILE
432
A
LEU
433
n
48
LEU
433
A
ALA
434
n
49
ALA
434
A
THR
435
n
50
THR
435
A
VAL
436
n
51
VAL
436
A
SER
437
n
52
SER
437
A
VAL
438
n
53
VAL
438
A
LEU
439
n
54
LEU
439
A
ALA
440
n
55
ALA
440
A
VAL
441
n
56
VAL
441
A
LYS
442
n
57
LYS
442
A
GLY
443
n
58
GLY
443
A
SER
444
n
59
SER
444
A
LEU
445
n
60
LEU
445
A
ALA
446
n
61
ALA
446
A
PRO
447
n
62
PRO
447
A
ILE
448
n
63
ILE
448
A
SER
449
n
64
SER
449
A
GLY
450
n
65
GLY
450
A
THR
451
n
66
THR
451
A
VAL
452
n
67
VAL
452
A
GLN
453
n
68
GLN
453
A
SER
454
n
69
SER
454
A
ALA
455
n
70
ALA
455
A
HIS
456
n
71
HIS
456
A
LEU
457
n
72
LEU
457
A
ILE
458
n
73
ILE
458
A
ILE
459
n
74
ILE
459
A
ARG
460
n
75
ARG
460
A
PHE
461
n
76
PHE
461
A
ASP
462
n
77
ASP
462
A
GLU
463
n
78
GLU
463
A
ASN
464
n
79
ASN
464
A
GLY
465
n
80
GLY
465
A
VAL
466
n
81
VAL
466
A
LEU
467
n
82
LEU
467
A
LEU
468
n
83
LEU
468
A
ASN
469
n
84
ASN
469
A
ASN
470
n
85
ASN
470
A
SER
471
n
86
SER
471
A
PHE
472
n
87
PHE
472
A
LEU
473
n
88
LEU
473
A
ASP
474
n
89
ASP
474
A
PRO
475
n
90
PRO
475
A
GLU
476
n
91
GLU
476
A
TYR
477
n
92
TYR
477
A
TRP
478
n
93
TRP
478
A
ASN
479
n
94
ASN
479
A
PHE
480
n
95
PHE
480
A
ARG
481
n
96
ARG
481
A
ASN
482
n
97
ASN
482
A
GLY
483
n
98
GLY
483
A
ASP
484
n
99
ASP
484
A
LEU
485
n
100
LEU
485
A
THR
486
n
101
THR
486
A
GLU
487
n
102
GLU
487
A
GLY
488
n
103
GLY
488
A
THR
489
n
104
THR
489
A
ALA
490
n
105
ALA
490
A
TYR
491
n
106
TYR
491
A
THR
492
n
107
THR
492
A
ASN
493
n
108
ASN
493
A
ALA
494
n
109
ALA
494
A
VAL
495
n
110
VAL
495
A
GLY
496
n
111
GLY
496
A
PHE
497
n
112
PHE
497
A
MET
498
n
113
MET
498
A
PRO
499
n
114
PRO
499
A
ASN
500
n
115
ASN
500
A
LEU
501
n
116
LEU
501
A
SER
502
n
117
SER
502
A
ALA
503
n
118
ALA
503
A
TYR
504
n
119
TYR
504
A
PRO
505
n
120
PRO
505
A
LYS
506
n
121
LYS
506
A
SER
507
n
122
SER
507
A
HIS
508
n
123
HIS
508
A
GLY
509
n
124
GLY
509
A
LYS
510
n
125
LYS
510
A
THR
511
n
126
THR
511
A
ALA
512
n
127
ALA
512
A
LYS
513
n
128
LYS
513
A
SER
514
n
129
SER
514
A
ASN
515
n
130
ASN
515
A
ILE
516
n
131
ILE
516
A
VAL
517
n
132
VAL
517
A
SER
518
n
133
SER
518
A
GLN
519
n
134
GLN
519
A
VAL
520
n
135
VAL
520
A
TYR
521
n
136
TYR
521
A
LEU
522
n
137
LEU
522
A
ASN
523
n
138
ASN
523
A
GLY
524
n
139
GLY
524
A
ASP
525
n
140
ASP
525
A
LYS
526
n
141
LYS
526
A
THR
527
n
142
THR
527
A
LYS
528
n
143
LYS
528
A
PRO
529
n
144
PRO
529
A
VAL
530
n
145
VAL
530
A
THR
531
n
146
THR
531
A
LEU
532
n
147
LEU
532
A
THR
533
n
148
THR
533
A
ILE
534
n
149
ILE
534
A
THR
535
n
150
THR
535
A
LEU
536
n
151
LEU
536
A
ASN
537
n
152
ASN
537
A
GLY
538
n
153
GLY
538
A
THR
539
n
154
THR
539
A
GLN
540
n
155
GLN
540
A
GLU
541
n
156
GLU
541
A
THR
542
n
157
THR
542
A
GLY
543
n
158
GLY
543
A
ASP
544
n
159
ASP
544
A
THR
545
n
160
THR
545
A
THR
546
n
161
THR
546
A
PRO
547
n
162
PRO
547
A
SER
548
n
163
SER
548
A
ALA
549
n
164
ALA
549
A
TYR
550
n
165
TYR
550
A
SER
551
n
166
SER
551
A
MET
552
n
167
MET
552
A
SER
553
n
168
SER
553
A
PHE
554
n
169
PHE
554
A
SER
555
n
170
SER
555
A
TRP
556
n
171
TRP
556
A
ASP
557
n
172
ASP
557
A
TRP
558
n
173
TRP
558
A
SER
559
n
174
SER
559
A
GLY
560
n
175
GLY
560
A
HIS
561
n
176
HIS
561
A
ASN
562
n
177
ASN
562
A
TYR
563
n
178
TYR
563
A
ILE
564
n
179
ILE
564
A
ASN
565
n
180
ASN
565
A
GLU
566
n
181
GLU
566
A
ILE
567
n
182
ILE
567
A
PHE
568
n
183
PHE
568
A
ALA
569
n
184
ALA
569
A
THR
570
n
185
THR
570
A
SER
571
n
186
SER
571
A
SER
572
n
187
SER
572
A
TYR
573
n
188
TYR
573
A
THR
574
n
189
THR
574
A
PHE
575
n
190
PHE
575
A
SER
576
n
191
SER
576
A
TYR
577
n
192
TYR
577
A
ILE
578
n
193
ILE
578
A
ALA
579
n
194
ALA
579
A
GLN
580
n
195
GLN
580
A
GLU
581
n
196
GLU
581
A
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
8_656
-z+1,x+1/2,-y+3/2
crystal symmetry operation
86.4000000000
43.2000000000
129.6000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
11_466
y-1/2,-z+3/2,-x+1
crystal symmetry operation
-43.2000000000
129.6000000000
86.4000000000
1
A
THR
386
A
THR
1
1
Y
1
A
GLY
387
A
GLY
2
1
Y
1
A
ALA
388
A
ALA
3
1
Y
1
A
ILE
389
A
ILE
4
1
Y
1
A
THR
390
A
THR
5
1
Y
1
A
VAL
391
A
VAL
6
1
Y
1
A
GLY
392
A
GLY
7
1
Y
1
A
ASN
393
A
ASN
8
1
Y
1
A
LYS
394
A
LYS
9
1
Y
1
A
ASN
395
A
ASN
10
1
Y
1
A
A
HZ2
H2
LYS
HOH
513
615
1.28
1
A
A
O
H2
HOH
HOH
642
644
1.51
1
A
A
H2
O
HOH
HOH
638
713
1.54
1
A
A
H1
O
HOH
HOH
639
704
1.54
1
A
A
H1
O
HOH
HOH
584
709
1.56
1_555
12_675
1
A
ASP
397
-83.64
-78.12
1
A
THR
404
83.71
159.43
1
A
ASN
414
-135.77
-44.80
1
A
CYS
428
-119.26
57.05
1
A
ASN
470
-91.91
51.91
1
A
LEU
485
-125.35
-155.28
1
A
ALA
494
-142.24
34.33
1
A
SER
507
77.51
-11.36
1
A
HIS
508
-83.09
35.21
1
A
THR
539
42.52
-74.97
1
A
GLN
540
57.51
76.89
1
A
ASN
565
80.41
0.28
IN THE MONOMER STRUCTURE, THERE ARE TWO REGIONS WHERE B
FACTORS ARE HIGH. ONE REGION IS FROM 396 - 397 WHICH IS
LOCATED AT THE N-TERMINUS. THE OTHER REGION IS BETWEEN
BETA STRANDS H AND I FOR RESIDUES 540 - 546.
0.1580000
0.1580000
1.7
1
1.7
435
2177
0
0
1742
0.011
1.5
1.70
12.0
1KNB
17633
2.0
1
73.9
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
CRYSTAL STRUCTURE OF THE RECEPTOR-BINDING DOMAIN OF ADENOVIRUS TYPE 5 FIBER PROTEIN AT 1.7 ANGSTROMS RESOLUTION
1
N
N
2
N
N
A
GLY
443
A
GLY
58
HELX_P
A
LEU
445
A
LEU
60
5
1
3
A
PRO
475
A
PRO
90
HELX_P
A
TYR
477
A
TYR
92
5
2
3
A
VAL
495
A
VAL
110
HELX_P
A
PHE
497
A
PHE
112
5
3
3
A
HIS
508
A
HIS
123
HELX_P
A
LYS
510
A
LYS
125
5
4
3
A
ALA
512
A
ALA
127
HELX_P
A
SER
514
A
SER
129
5
5
3
A
LEU
522
A
LEU
137
HELX_P
A
GLY
524
A
GLY
139
5
6
3
CELL RECEPTOR RECOGNITION
CELL RECEPTOR RECOGNITION
A
ALA
446
A
ALA
61
1
A
PRO
447
A
PRO
62
0.14
FIBP_ADE05
UNP
1
1
P11818
MKRARPSEDTFNPVYPYDTETGPPTVPFLTPPFVSPNGFQESPPGVLSLRLSEPLVTSNGMLALKMGNGLSLDEAGNLTS
QNVTTVSPPLKKTKSNINLEISAPLTVTSEALTVAAAAPLMVAGNTLTMQSQAPLTVHDSKLSIATQGPLTVSEGKLALQ
TSGPLTTTDSSTLTITASPPLTTATGSLGIDLKEPIYTQNGKLGLKYGAPLHVTDDLNTLTVATGPGVTINNTSLQTKVT
GALGFDSQGNMQLNVAGGLRIDSQNRRLILDVSYPFDAQNQLNLRLGQGPLFINSAHNLDINYNKGLYLFTASNNSKKLE
VNLSTAKGLMFDATAIAINAGDGLEFGSPNAPNTNPLKTKIGHGLEFDSNKAMVPKLGTGLSFDSTGAITVGNKNNDKLT
LWTTPAPSPNCRLNAEKDAKLTLVLTKCGSQILATVSVLAVKGSLAPISGTVQSAHLIIRFDENGVLLNNSFLDPEYWNF
RNGDLTEGTAYTNAVGFMPNLSAYPKSHGKTAKSNIVSQVYLNGDKTKPVTLTITLNGTQETGDTTPSAYSMSFSWDWSG
HNYINEIFATSSYTFSYIAQE
386
581
1KNB
386
581
P11818
A
1
1
196
6
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
400
A
THR
15
A
TRP
402
A
TRP
17
A
ASP
418
A
ASP
33
A
LYS
427
A
LYS
42
A
SER
430
A
SER
45
A
ALA
440
A
ALA
55
A
ASN
479
A
ASN
94
A
ASN
482
A
ASN
97
A
LEU
485
A
LEU
100
A
THR
486
A
THR
101
A
TYR
573
A
TYR
188
A
TYR
577
A
TYR
192
A
SER
454
A
SER
69
A
PHE
461
A
PHE
76
A
ASN
515
A
ASN
130
A
TYR
521
A
TYR
136
A
LYS
528
A
LYS
143
A
THR
535
A
THR
150
A
TYR
550
A
TYR
165
A
TRP
556
A
TRP
171
198
P 21 3