0.008123 0.000000 0.000000 0.000000 0.008123 0.000000 0.000000 0.000000 0.009042 0.00000 0.00000 0.00000 Han, S. Bolin, J.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90 90 90 123.1 123.1 110.6 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking Fe 2 55.845 FE (II) ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C7 H8 O2 124.137 3-METHYLCATECHOL 3-METHYL-BENZENE-1,2-DIOL non-polymer C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H10 O 74.122 TERTIARY-BUTYL ALCOHOL 2-METHYL-2-PROPANOL non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N FE N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 S C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H Y 231 N C N 232 N O Y 233 N C N 234 N O Y 235 N C N 236 N C Y 237 N C Y 238 N C Y 239 N C N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C N 253 N C N 254 N S N 255 N C N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C Y 278 N C N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C N 313 N O N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N O N 323 N C N 324 N C N 325 N C N 326 N C N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 R C N 342 N O N 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N N Y 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C N 392 N O N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C N 410 N C N 411 N C N 412 N O N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing Y 219 N doub Y 220 N sing N 221 N sing N 222 N sing Y 223 N sing N 224 N sing N 225 N sing Y 226 N doub N 227 N sing N 228 N sing N 229 N sing Y 230 N sing N 231 N sing Y 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing Y 265 N doub Y 266 N sing Y 267 N sing N 268 N sing Y 269 N doub N 270 N sing Y 271 N doub N 272 N sing Y 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing Y 348 N doub Y 349 N sing Y 350 N sing N 351 N sing Y 352 N doub Y 353 N sing Y 354 N sing N 355 N sing Y 356 N sing Y 357 N doub N 358 N sing Y 359 N doub N 360 N sing Y 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing Y 376 N doub Y 377 N sing Y 378 N sing N 379 N sing Y 380 N doub N 381 N sing Y 382 N doub N 383 N sing Y 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N doub N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 273 34887 34895 10.1074/jbc.273.52.34887 9857017 Molecular basis for the stabilization and inhibition of 2, 3-dihydroxybiphenyl 1,2-dioxygenase by t-butanol. 1998 US Science SCIEAS 0038 0036-8075 270 976 980 Crystal Structure of the Biphenyl-cleaving Extradiol Dioxygenase from a PCB-degrading Pseudomonad. 1995 John Wiley and Sons UK Handbook of Metalloproteins 0-471-62743-7 632 642 2,3-Dihydroxybiphenyl 1,2-dioxygenase. 2001 10.2210/pdb1knf/pdb pdb_00001knf 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 mirrors IMAGE PLATE 1995-11-30 RIGAKU RAXIS II YALE MIRRORS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 32377.598 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE 1.13.11.39 1 man polymer 55.845 FE (II) ION 2 syn non-polymer 124.137 3-METHYLCATECHOL 1 syn non-polymer 74.122 TERTIARY-BUTYL ALCOHOL 2 syn non-polymer 18.015 water 121 nat water Biphenyl-2,3-diol 1,2-dioxygenase, DHBD no no SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLK QAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFY TDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDADGLITSTLGRH TNDHMVSFYASTPSGVEVEYGWSARTVDRSWVVVRHDSPSMWGHKSVRDKAAARNKA SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLK QAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFY TDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDADGLITSTLGRH TNDHMVSFYASTPSGVEVEYGWSARTVDRSWVVVRHDSPSMWGHKSVRDKAAARNKA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Burkholderia Burkholderia xenovorans LB400 Burkholderia sample HYPEREXPRESSED IN THE PARENT STRAIN (This organism has been reclassified. Prior publications may refer to this source as Pseudomonas sp. strain LB400.) BPHC 266265 Burkholderia xenovorans 292 Burkholderia cepacia PLASMID PLEBD4 1 3.22 62 VAPOR DIFFUSION, SITTING DROP 7.5 PEG4000, t-butanol, 3-methyl catechol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 278K 278 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Derived calculations Source and taxonomy Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2002-03-27 1 1 2008-04-27 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1HAN is the same protein without substrate. 1KMY IS the Crystal Structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase Complexed with 2,3-dihydroxybiphenyl under Anaerobic Condition. 1KND IS the Crystal Structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase Complexed with Catechol under Anaerobic Condition. RCSB Y RCSB 2001-12-18 REL FE2 FE (II) ION MBD 3-METHYLCATECHOL TBU TERTIARY-BUTYL ALCOHOL HOH water 1HAN PDB experimental model FE2 500 2 FE2 FE2 500 A FE2 501 2 FE2 FE2 501 A MBD 301 3 MBD MBD 301 A TBU 601 4 TBU TBU 601 A TBU 600 4 TBU TBU 600 A HOH 1001 5 HOH HOH 1001 A HOH 1004 5 HOH HOH 1004 A HOH 1006 5 HOH HOH 1006 A HOH 1008 5 HOH HOH 1008 A HOH 1010 5 HOH HOH 1010 A HOH 1011 5 HOH HOH 1011 A HOH 1015 5 HOH HOH 1015 A HOH 1017 5 HOH HOH 1017 A HOH 1019 5 HOH HOH 1019 A HOH 1021 5 HOH HOH 1021 A HOH 1022 5 HOH HOH 1022 A HOH 1023 5 HOH HOH 1023 A HOH 1027 5 HOH HOH 1027 A HOH 1032 5 HOH HOH 1032 A HOH 1034 5 HOH HOH 1034 A HOH 1035 5 HOH HOH 1035 A HOH 1037 5 HOH HOH 1037 A HOH 1038 5 HOH HOH 1038 A HOH 1041 5 HOH HOH 1041 A HOH 1042 5 HOH HOH 1042 A HOH 1044 5 HOH HOH 1044 A HOH 1048 5 HOH HOH 1048 A HOH 1049 5 HOH HOH 1049 A HOH 1051 5 HOH HOH 1051 A HOH 1054 5 HOH HOH 1054 A HOH 1056 5 HOH HOH 1056 A HOH 1059 5 HOH HOH 1059 A HOH 1062 5 HOH HOH 1062 A HOH 1063 5 HOH HOH 1063 A HOH 1066 5 HOH HOH 1066 A HOH 1070 5 HOH HOH 1070 A HOH 1075 5 HOH HOH 1075 A HOH 1077 5 HOH HOH 1077 A HOH 2004 5 HOH HOH 2004 A HOH 2005 5 HOH HOH 2005 A HOH 2007 5 HOH HOH 2007 A HOH 2010 5 HOH HOH 2010 A HOH 2018 5 HOH HOH 2018 A HOH 2021 5 HOH HOH 2021 A HOH 2024 5 HOH HOH 2024 A HOH 3001 5 HOH HOH 3001 A HOH 3012 5 HOH HOH 3012 A HOH 4001 5 HOH HOH 4001 A HOH 4003 5 HOH HOH 4003 A HOH 4006 5 HOH HOH 4006 A HOH 4007 5 HOH HOH 4007 A HOH 4014 5 HOH HOH 4014 A HOH 4020 5 HOH HOH 4020 A HOH 4023 5 HOH HOH 4023 A HOH 4026 5 HOH HOH 4026 A HOH 4027 5 HOH HOH 4027 A HOH 5001 5 HOH HOH 5001 A HOH 5016 5 HOH HOH 5016 A HOH 5020 5 HOH HOH 5020 A HOH 5022 5 HOH HOH 5022 A HOH 5027 5 HOH HOH 5027 A HOH 5029 5 HOH HOH 5029 A HOH 5032 5 HOH HOH 5032 A HOH 5036 5 HOH HOH 5036 A HOH 5039 5 HOH HOH 5039 A HOH 5042 5 HOH HOH 5042 A HOH 5043 5 HOH HOH 5043 A HOH 5053 5 HOH HOH 5053 A HOH 5061 5 HOH HOH 5061 A HOH 5065 5 HOH HOH 5065 A HOH 5071 5 HOH HOH 5071 A HOH 5077 5 HOH HOH 5077 A HOH 5082 5 HOH HOH 5082 A HOH 5088 5 HOH HOH 5088 A HOH 5091 5 HOH HOH 5091 A HOH 5107 5 HOH HOH 5107 A HOH 5123 5 HOH HOH 5123 A HOH 5137 5 HOH HOH 5137 A HOH 6016 5 HOH HOH 6016 A HOH 6023 5 HOH HOH 6023 A HOH 6033 5 HOH HOH 6033 A HOH 6044 5 HOH HOH 6044 A HOH 6061 5 HOH HOH 6061 A HOH 6065 5 HOH HOH 6065 A HOH 6068 5 HOH HOH 6068 A HOH 6072 5 HOH HOH 6072 A HOH 6092 5 HOH HOH 6092 A HOH 6095 5 HOH HOH 6095 A HOH 6103 5 HOH HOH 6103 A HOH 6141 5 HOH HOH 6141 A HOH 6144 5 HOH HOH 6144 A HOH 6152 5 HOH HOH 6152 A HOH 6198 5 HOH HOH 6198 A HOH 7012 5 HOH HOH 7012 A HOH 7053 5 HOH HOH 7053 A HOH 7109 5 HOH HOH 7109 A HOH 7119 5 HOH HOH 7119 A HOH 7140 5 HOH HOH 7140 A HOH 7168 5 HOH HOH 7168 A HOH 7241 5 HOH HOH 7241 A HOH 8001 5 HOH HOH 8001 A HOH 8002 5 HOH HOH 8002 A HOH 8003 5 HOH HOH 8003 A HOH 8004 5 HOH HOH 8004 A HOH 8008 5 HOH HOH 8008 A HOH 8011 5 HOH HOH 8011 A HOH 8015 5 HOH HOH 8015 A HOH 8016 5 HOH HOH 8016 A HOH 8018 5 HOH HOH 8018 A HOH 8019 5 HOH HOH 8019 A HOH 8020 5 HOH HOH 8020 A HOH 8021 5 HOH HOH 8021 A HOH 8022 5 HOH HOH 8022 A HOH 8023 5 HOH HOH 8023 A HOH 8024 5 HOH HOH 8024 A HOH 8025 5 HOH HOH 8025 A HOH 8029 5 HOH HOH 8029 A HOH 8031 5 HOH HOH 8031 A HOH 8032 5 HOH HOH 8032 A HOH 8034 5 HOH HOH 8034 A HOH 8035 5 HOH HOH 8035 A HOH 8036 5 HOH HOH 8036 A HOH 8037 5 HOH HOH 8037 A HOH 9001 5 HOH HOH 9001 A HOH 9002 5 HOH HOH 9002 A HOH 9003 5 HOH HOH 9003 A SER 2 n 1 SER 2 A ILE 3 n 2 ILE 3 A ARG 4 n 3 ARG 4 A SER 5 n 4 SER 5 A LEU 6 n 5 LEU 6 A GLY 7 n 6 GLY 7 A TYR 8 n 7 TYR 8 A MET 9 n 8 MET 9 A GLY 10 n 9 GLY 10 A PHE 11 n 10 PHE 11 A ALA 12 n 11 ALA 12 A VAL 13 n 12 VAL 13 A SER 14 n 13 SER 14 A ASP 15 n 14 ASP 15 A VAL 16 n 15 VAL 16 A ALA 17 n 16 ALA 17 A ALA 18 n 17 ALA 18 A TRP 19 n 18 TRP 19 A ARG 20 n 19 ARG 20 A SER 21 n 20 SER 21 A PHE 22 n 21 PHE 22 A LEU 23 n 22 LEU 23 A THR 24 n 23 THR 24 A GLN 25 n 24 GLN 25 A LYS 26 n 25 LYS 26 A LEU 27 n 26 LEU 27 A GLY 28 n 27 GLY 28 A LEU 29 n 28 LEU 29 A MET 30 n 29 MET 30 A GLU 31 n 30 GLU 31 A ALA 32 n 31 ALA 32 A GLY 33 n 32 GLY 33 A THR 34 n 33 THR 34 A THR 35 n 34 THR 35 A ASP 36 n 35 ASP 36 A ASN 37 n 36 ASN 37 A GLY 38 n 37 GLY 38 A ASP 39 n 38 ASP 39 A LEU 40 n 39 LEU 40 A PHE 41 n 40 PHE 41 A ARG 42 n 41 ARG 42 A ILE 43 n 42 ILE 43 A ASP 44 n 43 ASP 44 A SER 45 n 44 SER 45 A ARG 46 n 45 ARG 46 A ALA 47 n 46 ALA 47 A TRP 48 n 47 TRP 48 A ARG 49 n 48 ARG 49 A ILE 50 n 49 ILE 50 A ALA 51 n 50 ALA 51 A VAL 52 n 51 VAL 52 A GLN 53 n 52 GLN 53 A GLN 54 n 53 GLN 54 A GLY 55 n 54 GLY 55 A GLU 56 n 55 GLU 56 A VAL 57 n 56 VAL 57 A ASP 58 n 57 ASP 58 A ASP 59 n 58 ASP 59 A LEU 60 n 59 LEU 60 A ALA 61 n 60 ALA 61 A PHE 62 n 61 PHE 62 A ALA 63 n 62 ALA 63 A GLY 64 n 63 GLY 64 A TYR 65 n 64 TYR 65 A GLU 66 n 65 GLU 66 A VAL 67 n 66 VAL 67 A ALA 68 n 67 ALA 68 A ASP 69 n 68 ASP 69 A ALA 70 n 69 ALA 70 A ALA 71 n 70 ALA 71 A GLY 72 n 71 GLY 72 A LEU 73 n 72 LEU 73 A ALA 74 n 73 ALA 74 A GLN 75 n 74 GLN 75 A MET 76 n 75 MET 76 A ALA 77 n 76 ALA 77 A ASP 78 n 77 ASP 78 A LYS 79 n 78 LYS 79 A LEU 80 n 79 LEU 80 A LYS 81 n 80 LYS 81 A GLN 82 n 81 GLN 82 A ALA 83 n 82 ALA 83 A GLY 84 n 83 GLY 84 A ILE 85 n 84 ILE 85 A ALA 86 n 85 ALA 86 A VAL 87 n 86 VAL 87 A THR 88 n 87 THR 88 A THR 89 n 88 THR 89 A GLY 90 n 89 GLY 90 A ASP 91 n 90 ASP 91 A ALA 92 n 91 ALA 92 A SER 93 n 92 SER 93 A LEU 94 n 93 LEU 94 A ALA 95 n 94 ALA 95 A ARG 96 n 95 ARG 96 A ARG 97 n 96 ARG 97 A ARG 98 n 97 ARG 98 A GLY 99 n 98 GLY 99 A VAL 100 n 99 VAL 100 A THR 101 n 100 THR 101 A GLY 102 n 101 GLY 102 A LEU 103 n 102 LEU 103 A ILE 104 n 103 ILE 104 A THR 105 n 104 THR 105 A PHE 106 n 105 PHE 106 A ALA 107 n 106 ALA 107 A ASP 108 n 107 ASP 108 A PRO 109 n 108 PRO 109 A PHE 110 n 109 PHE 110 A GLY 111 n 110 GLY 111 A LEU 112 n 111 LEU 112 A PRO 113 n 112 PRO 113 A LEU 114 n 113 LEU 114 A GLU 115 n 114 GLU 115 A ILE 116 n 115 ILE 116 A TYR 117 n 116 TYR 117 A TYR 118 n 117 TYR 118 A GLY 119 n 118 GLY 119 A ALA 120 n 119 ALA 120 A SER 121 n 120 SER 121 A GLU 122 n 121 GLU 122 A VAL 123 n 122 VAL 123 A PHE 124 n 123 PHE 124 A GLU 125 n 124 GLU 125 A LYS 126 n 125 LYS 126 A PRO 127 n 126 PRO 127 A PHE 128 n 127 PHE 128 A LEU 129 n 128 LEU 129 A PRO 130 n 129 PRO 130 A GLY 131 n 130 GLY 131 A ALA 132 n 131 ALA 132 A ALA 133 n 132 ALA 133 A VAL 134 n 133 VAL 134 A SER 135 n 134 SER 135 A GLY 136 n 135 GLY 136 A PHE 137 n 136 PHE 137 A LEU 138 n 137 LEU 138 A THR 139 n 138 THR 139 A GLY 140 n 139 GLY 140 A GLU 141 n 140 GLU 141 A GLN 142 n 141 GLN 142 A GLY 143 n 142 GLY 143 A LEU 144 n 143 LEU 144 A GLY 145 n 144 GLY 145 A HIS 146 n 145 HIS 146 A PHE 147 n 146 PHE 147 A VAL 148 n 147 VAL 148 A ARG 149 n 148 ARG 149 A CYS 150 n 149 CYS 150 A VAL 151 n 150 VAL 151 A PRO 152 n 151 PRO 152 A ASP 153 n 152 ASP 153 A SER 154 n 153 SER 154 A ASP 155 n 154 ASP 155 A LYS 156 n 155 LYS 156 A ALA 157 n 156 ALA 157 A LEU 158 n 157 LEU 158 A ALA 159 n 158 ALA 159 A PHE 160 n 159 PHE 160 A TYR 161 n 160 TYR 161 A THR 162 n 161 THR 162 A ASP 163 n 162 ASP 163 A VAL 164 n 163 VAL 164 A LEU 165 n 164 LEU 165 A GLY 166 n 165 GLY 166 A PHE 167 n 166 PHE 167 A GLN 168 n 167 GLN 168 A LEU 169 n 168 LEU 169 A SER 170 n 169 SER 170 A ASP 171 n 170 ASP 171 A VAL 172 n 171 VAL 172 A ILE 173 n 172 ILE 173 A ASP 174 n 173 ASP 174 A MET 175 n 174 MET 175 A LYS 176 n 175 LYS 176 A MET 177 n 176 MET 177 A GLY 178 n 177 GLY 178 A PRO 179 n 178 PRO 179 A ASP 180 n 179 ASP 180 A VAL 181 n 180 VAL 181 A THR 182 n 181 THR 182 A VAL 183 n 182 VAL 183 A PRO 184 n 183 PRO 184 A ALA 185 n 184 ALA 185 A TYR 186 n 185 TYR 186 A PHE 187 n 186 PHE 187 A LEU 188 n 187 LEU 188 A HIS 189 n 188 HIS 189 A CYS 190 n 189 CYS 190 A ASN 191 n 190 ASN 191 A GLU 192 n 191 GLU 192 A ARG 193 n 192 ARG 193 A HIS 194 n 193 HIS 194 A HIS 195 n 194 HIS 195 A THR 196 n 195 THR 196 A LEU 197 n 196 LEU 197 A ALA 198 n 197 ALA 198 A ILE 199 n 198 ILE 199 A ALA 200 n 199 ALA 200 A ALA 201 n 200 ALA 201 A PHE 202 n 201 PHE 202 A PRO 203 n 202 PRO 203 A LEU 204 n 203 LEU 204 A PRO 205 n 204 PRO 205 A LYS 206 n 205 LYS 206 A ARG 207 n 206 ARG 207 A ILE 208 n 207 ILE 208 A HIS 209 n 208 HIS 209 A HIS 210 n 209 HIS 210 A PHE 211 n 210 PHE 211 A MET 212 n 211 MET 212 A LEU 213 n 212 LEU 213 A GLU 214 n 213 GLU 214 A VAL 215 n 214 VAL 215 A ALA 216 n 215 ALA 216 A SER 217 n 216 SER 217 A LEU 218 n 217 LEU 218 A ASP 219 n 218 ASP 219 A ASP 220 n 219 ASP 220 A VAL 221 n 220 VAL 221 A GLY 222 n 221 GLY 222 A PHE 223 n 222 PHE 223 A ALA 224 n 223 ALA 224 A PHE 225 n 224 PHE 225 A ASP 226 n 225 ASP 226 A ARG 227 n 226 ARG 227 A VAL 228 n 227 VAL 228 A ASP 229 n 228 ASP 229 A ALA 230 n 229 ALA 230 A ASP 231 n 230 ASP 231 A GLY 232 n 231 GLY 232 A LEU 233 n 232 LEU 233 A ILE 234 n 233 ILE 234 A THR 235 n 234 THR 235 A SER 236 n 235 SER 236 A THR 237 n 236 THR 237 A LEU 238 n 237 LEU 238 A GLY 239 n 238 GLY 239 A ARG 240 n 239 ARG 240 A HIS 241 n 240 HIS 241 A THR 242 n 241 THR 242 A ASN 243 n 242 ASN 243 A ASP 244 n 243 ASP 244 A HIS 245 n 244 HIS 245 A MET 246 n 245 MET 246 A VAL 247 n 246 VAL 247 A SER 248 n 247 SER 248 A PHE 249 n 248 PHE 249 A TYR 250 n 249 TYR 250 A ALA 251 n 250 ALA 251 A SER 252 n 251 SER 252 A THR 253 n 252 THR 253 A PRO 254 n 253 PRO 254 A SER 255 n 254 SER 255 A GLY 256 n 255 GLY 256 A VAL 257 n 256 VAL 257 A GLU 258 n 257 GLU 258 A VAL 259 n 258 VAL 259 A GLU 260 n 259 GLU 260 A TYR 261 n 260 TYR 261 A GLY 262 n 261 GLY 262 A TRP 263 n 262 TRP 263 A SER 264 n 263 SER 264 A ALA 265 n 264 ALA 265 A ARG 266 n 265 ARG 266 A THR 267 n 266 THR 267 A VAL 268 n 267 VAL 268 A ASP 269 n 268 ASP 269 A ARG 270 n 269 ARG 270 A SER 271 n 270 SER 271 A TRP 272 n 271 TRP 272 A VAL 273 n 272 VAL 273 A VAL 274 n 273 VAL 274 A VAL 275 n 274 VAL 275 A ARG 276 n 275 ARG 276 A HIS 277 n 276 HIS 277 A ASP 278 n 277 ASP 278 A SER 279 n 278 SER 279 A PRO 280 n 279 PRO 280 A SER 281 n 280 SER 281 A MET 282 n 281 MET 282 A TRP 283 n 282 TRP 283 A GLY 284 n 283 GLY 284 A HIS 285 n 284 HIS 285 A LYS 286 n 285 LYS 286 A SER 287 n 286 SER 287 A VAL 288 n 287 VAL 288 A ARG 289 n 288 ARG 289 A n 289 290 A n 290 291 A n 291 292 A n 292 293 A n 293 294 A n 294 295 A n 295 296 A n 296 297 A n 297 298 A author_and_software_defined_assembly PISA,PQS 8 octameric 26660 -215 78170 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A HIS 210 A NE2 HIS 209 1_555 102.7 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A GLU 260 A OE2 GLU 259 1_555 106.3 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 A GLU 260 A OE2 GLU 259 1_555 90.7 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA1 MBD 1_555 103.8 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA1 MBD 1_555 146.2 A GLU 260 A OE2 GLU 259 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA1 MBD 1_555 101.6 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA2 MBD 1_555 150.6 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA2 MBD 1_555 77.3 A GLU 260 A OE2 GLU 259 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA2 MBD 1_555 103.1 A MBD 301 A D OA1 MBD 1_555 A FE2 500 B FE FE2 1_555 A MBD 301 A D OA2 MBD 1_555 69.3 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A HOH 3001 B G O HOH 1_555 92.2 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 A HOH 3001 B G O HOH 1_555 163.3 A GLU 260 A OE2 GLU 259 1_555 A FE2 500 B FE FE2 1_555 A HOH 3001 B G O HOH 1_555 77.8 A MBD 301 A D OA1 MBD 1_555 A FE2 500 B FE FE2 1_555 A HOH 3001 B G O HOH 1_555 30.7 A MBD 301 A D OA2 MBD 1_555 A FE2 500 B FE FE2 1_555 A HOH 3001 B G O HOH 1_555 93.4 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A HOH 3012 B G O HOH 1_555 95.7 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 A HOH 3012 B G O HOH 1_555 109.4 A GLU 260 A OE2 GLU 259 1_555 A FE2 500 B FE FE2 1_555 A HOH 3012 B G O HOH 1_555 146.2 A MBD 301 A D OA1 MBD 1_555 A FE2 500 B FE FE2 1_555 A HOH 3012 B G O HOH 1_555 47.3 A MBD 301 A D OA2 MBD 1_555 A FE2 500 B FE FE2 1_555 A HOH 3012 B G O HOH 1_555 58.0 A HOH 3001 B G O HOH 1_555 A FE2 500 B FE FE2 1_555 A HOH 3012 B G O HOH 1_555 76.0 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 79.8 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 83.1 A GLU 260 A OE2 GLU 259 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 172.2 A MBD 301 A D OA1 MBD 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 81.3 A MBD 301 A D OA2 MBD 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 71.0 A HOH 3001 B G O HOH 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 107.2 A HOH 3012 B G O HOH 1_555 A FE2 500 B FE FE2 1_555 A HOH 9001 A G O HOH 1_555 34.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_555 -y,x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 4_555 y,-x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_556 -x,y,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 110.6000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_556 x,-y,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 110.6000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 110.6000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_556 -y,-x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 110.6000000000 A N MET 30 A N MET 29 A O ARG 42 A O ARG 41 A N PHE 41 A N PHE 40 A O ILE 50 A O ILE 49 A O GLN 53 A O GLN 52 A N PHE 11 A N PHE 10 A N GLY 10 A N GLY 9 A O ALA 61 A O ALA 60 A N TYR 65 A N TYR 64 A O GLU 115 A O GLU 114 A O LEU 114 A O LEU 113 A N PHE 106 A N PHE 105 A O THR 105 A O THR 104 A N THR 88 A N THR 87 A O HIS 277 A O HIS 276 A N VAL 172 A N VAL 171 A N GLN 168 A N GLN 167 A O HIS 189 A O HIS 188 A N LEU 188 A N LEU 187 A O LEU 197 A O LEU 196 A O ALA 198 A O ALA 197 A N ARG 149 A N ARG 148 A N HIS 146 A N HIS 145 A O MET 212 A O MET 211 A N PHE 211 A N PHE 210 A O GLU 260 A O GLU 259 A O TRP 263 A O TRP 262 A N VAL 247 A N VAL 246 A O SER 248 A O SER 247 A N GLY 239 A N GLY 238 A N ARG 240 A N ARG 239 A O MET 282 A O MET 281 1 A ASP 290 A ASP 289 1 Y 1 A LYS 291 A LYS 290 1 Y 1 A ALA 292 A ALA 291 1 Y 1 A ALA 293 A ALA 292 1 Y 1 A ALA 294 A ALA 293 1 Y 1 A ARG 295 A ARG 294 1 Y 1 A ASN 296 A ASN 295 1 Y 1 A LYS 297 A LYS 296 1 Y 1 A ALA 298 A ALA 297 1 Y 1 A ASP 44 -157.25 -153.14 1 A PHE 106 -170.91 -172.98 1 A ALA 133 -69.41 96.94 1 A THR 139 -130.51 -100.05 1 A MET 177 -110.44 78.73 1 A ASN 191 -163.71 -161.56 24.3 ALL FE-PROTEIN BOND DISTANCES WERE HARMONICALLY RESTRAINED TO AN EQUILIBRIUM DISTANCE OF 2.2 ANGSTROMS USING A WEAK FORCE CONSTANT OF 10 KCAL/(MOLE X ANGSTROM-SQUARED). BOND LENGTH, BOND ANGLE, AND PLANARITY RESTRAINTS SIMILAR TO THOSE USED FOR AROMATIC SIDE CHAINS WERE APPLIED TO HET GROUP CAQ (CATECHOL). FE-CAQ AND FE-WATER BOND DISTANCES WERE NOT RESTRAINED. THE REFINED MODEL INCLUDES TWO MUTALLY EXCLUSIVE STRUCTURES IN THE VICINITY OF THE ACTIVE SITE. STRUCTURE ONE (labeled with alternate conformation marker A) INCLUDES A SUBSTRATE 3-METHYL-CATECHOL (MBD 301) AND WATERS 9001 and 9002 AT 50% OCCUPANCY. ATOMS OA1 AND OA2 OF MBD 301 AND WATER 9001 ARE COORDINATED TO FE2 500. STRUCTURE TWO (labeled with alternate conformation marker B) INCLUDES ONE MOLECULE OF T-BUTANOL (TBU 600) AND WATERS 3001, 3012, AND 4014 AT 50% OCCUPANCY, AND IS EQUIVALENT TO THE SUBSTRATE-FREE STRUCTURE WHERE WATERS 3001 AND 3012 ARE COORDINATED TO FE2 500. 0.1950000 0.1680000 0.2070000 0.1990000 1.9 7.0 1811 30504 30504 97.0 RANDOM 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT 1HAN Engh & Huber 1.9 7.0 121 2358 21 0 2216 0.01 1.47 1.9 1.0 1.5 2.8 1.0 1.5 0.2980000 0.2730000 1.93 46 767 81.9 1.9 40 1KNF 32641 32641 0 0 0.0800000 1 44.8 6.9 97.0 1.9 1.97 5.1 2397 0.2700000 1 3.8 73.1 phasing AMoRE refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK Crystal Structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase Complexed with 3-methyl Catechol under Anaerobic Condition 1 N N 2 N N 2 N N 3 N N 4 N N 4 N N 5 N N The biological assembly is homo-octamer generated by crystallographic symmetry A ASP 15 A ASP 14 HELX_P A LYS 26 A LYS 25 1 1 12 A ASP 69 A ASP 68 HELX_P A ALA 83 A ALA 82 1 2 15 A ASP 91 A ASP 90 HELX_P A GLY 99 A GLY 98 1 3 9 A THR 139 A THR 138 HELX_P A GLY 143 A GLY 142 5 4 5 A ASP 153 A ASP 152 HELX_P A VAL 164 A VAL 163 1 5 12 A SER 217 A SER 216 HELX_P A ALA 230 A ALA 229 1 6 14 metalc 2.158 A HIS 146 A NE2 HIS 145 1_555 A FE2 500 B FE FE2 1_555 metalc 2.577 A HIS 189 A NE2 HIS 188 1_555 A FE2 501 C FE FE2 1_555 metalc 2.284 A HIS 210 A NE2 HIS 209 1_555 A FE2 500 B FE FE2 1_555 metalc 1.965 A GLU 260 A OE2 GLU 259 1_555 A FE2 500 B FE FE2 1_555 metalc 2.327 A A MBD 301 D OA1 MBD 1_555 A FE2 500 B FE FE2 1_555 metalc 2.430 A A MBD 301 D OA2 MBD 1_555 A FE2 500 B FE FE2 1_555 metalc 2.650 B A FE2 500 B FE FE2 1_555 A HOH 3001 G O HOH 1_555 metalc 1.905 B A FE2 500 B FE FE2 1_555 A HOH 3012 G O HOH 1_555 metalc 2.309 A A FE2 500 B FE FE2 1_555 A HOH 9001 G O HOH 1_555 OXIDOREDUCTASE dioxygenase, 2, 3-dihydroxybiphenyl, 3-methyl catechol, oxidoreductase BPHC_BURCE UNP 1 1 P47228 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLK QAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFY TDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDADGLITSTLGRH TNDHMVSFYASTPSGVEVEYGWSARTVDRSWVVVRHDSPSMWGHKSVRDKAAARNKA 1 297 1KNF 2 298 P47228 A 1 1 297 8 10 anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A MET 30 A MET 29 A THR 35 A THR 34 A GLY 38 A GLY 37 A ARG 42 A ARG 41 A ILE 50 A ILE 49 A GLN 54 A GLN 53 A SER 5 A SER 4 A VAL 13 A VAL 12 A ASP 59 A ASP 58 A GLU 66 A GLU 65 A PRO 113 A PRO 112 A TYR 118 A TYR 117 A GLY 102 A GLY 101 A ALA 107 A ALA 106 A THR 88 A THR 87 A THR 89 A THR 88 A VAL 275 A VAL 274 A HIS 277 A HIS 276 A GLN 168 A GLN 167 A LYS 176 A LYS 175 A THR 182 A THR 181 A HIS 189 A HIS 188 A LEU 197 A LEU 196 A ALA 200 A ALA 199 A HIS 146 A HIS 145 A CYS 150 A CYS 149 A ILE 208 A ILE 207 A GLU 214 A GLU 213 A GLU 258 A GLU 257 A TRP 263 A TRP 262 A VAL 247 A VAL 246 A SER 252 A SER 251 A ILE 234 A ILE 233 A HIS 241 A HIS 240 A SER 281 A SER 280 A GLY 284 A GLY 283 BINDING SITE FOR RESIDUE FE2 A 500 A FE2 500 Software 7 BINDING SITE FOR RESIDUE FE2 A 501 A FE2 501 Software 1 BINDING SITE FOR RESIDUE MBD A 301 A MBD 301 Software 14 BINDING SITE FOR RESIDUE TBU A 601 A TBU 601 Software 3 BINDING SITE FOR RESIDUE TBU A 600 A TBU 600 Software 3 A HIS 146 A HIS 145 7 1_555 A HIS 210 A HIS 209 7 1_555 A GLU 260 A GLU 259 7 1_555 A MBD 301 D MBD 7 1_555 A HOH 3001 G HOH 7 1_555 A HOH 3012 G HOH 7 1_555 A HOH 9001 G HOH 7 1_555 A HIS 189 A HIS 188 1 1_555 A HIS 146 A HIS 145 14 1_555 A PHE 187 A PHE 186 14 1_555 A HIS 195 A HIS 194 14 1_555 A HIS 210 A HIS 209 14 1_555 A HIS 241 A HIS 240 14 1_555 A ASN 243 A ASN 242 14 1_555 A ASP 244 A ASP 243 14 1_555 A TYR 250 A TYR 249 14 1_555 A GLU 260 A GLU 259 14 1_555 A FE2 500 B FE2 14 1_555 A HOH 3001 G HOH 14 1_555 A HOH 3012 G HOH 14 1_555 A HOH 9001 G HOH 14 1_555 A HOH 9002 G HOH 14 1_555 A SER 236 A SER 235 3 1_555 A ARG 289 A ARG 288 3 1_555 A TBU 600 F TBU 3 1_555 A TYR 250 A TYR 249 3 1_555 A PRO 280 A PRO 279 3 1_555 A TBU 601 E TBU 3 1_555 97 I 4 2 2