0.01014
0.00586
0.00000
0.00000
0.01171
0.00000
0.00000
0.00000
0.00565
0.00000
0.00000
0.00000
Levdikov, V.
Blagova, L.
Bose, N.
Momany, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
98.580
98.580
176.950
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
Li 1
6.941
LITHIUM ION
non-polymer
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H13 N O4 S
195.237
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
non-polymer
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C8 H10 N O6 P
247.142
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Diaminopimelate Decarboxylase uses a Versatile Active Site for Stereospecific Decarboxylation
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
93
1
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
46920.816
Diaminopimelate decarboxylase
4.1.1.20
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
6.941
LITHIUM ION
2
syn
non-polymer
247.142
PYRIDOXAL-5'-PHOSPHATE
1
syn
non-polymer
195.237
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
1
syn
non-polymer
18.015
water
393
nat
water
DAP decarboxylase
no
no
MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI
ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISAL
AADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNG
QARLIRRRQTIEELLALELLHHHHH
MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI
ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISAL
AADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNG
QARLIRRRQTIEELLALELLHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
LysA
562
Escherichia coli
469008
Escherichia coli BL21(DE3)
BL21(DE3)
Plasmid
pET28b
1
2.64
53.48
VAPOR DIFFUSION, HANGING DROP
6.0
Lithium sulfate, MES, pyridoxal-5'-phosphate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
1
0
2003-11-11
1
1
2008-04-27
1
2
2011-07-13
Crystal Structure of a D,L-lysine complex of diaminopimelate decarboxylase
RCSB
Y
RCSB
2001-12-19
REL
SO4
SULFATE ION
LI
LITHIUM ION
PLP
PYRIDOXAL-5'-PHOSPHATE
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
HOH
water
SUL
20
2
SO4
SO4
520
A
LI
30
3
LI
LI
530
A
LI
40
3
LI
LI
540
A
PLP
54
4
PLP
PLP
554
A
MES
10
5
MES
MES
510
A
WAT
1
6
HOH
HOH
555
A
WAT
2
6
HOH
HOH
556
A
WAT
3
6
HOH
HOH
557
A
WAT
4
6
HOH
HOH
558
A
WAT
5
6
HOH
HOH
559
A
WAT
1
6
HOH
HOH
560
A
WAT
2
6
HOH
HOH
561
A
WAT
3
6
HOH
HOH
562
A
WAT
4
6
HOH
HOH
563
A
WAT
5
6
HOH
HOH
564
A
WAT
6
6
HOH
HOH
565
A
WAT
7
6
HOH
HOH
566
A
WAT
8
6
HOH
HOH
567
A
WAT
9
6
HOH
HOH
568
A
WAT
10
6
HOH
HOH
569
A
WAT
11
6
HOH
HOH
570
A
WAT
12
6
HOH
HOH
571
A
WAT
13
6
HOH
HOH
572
A
WAT
14
6
HOH
HOH
573
A
WAT
15
6
HOH
HOH
574
A
WAT
16
6
HOH
HOH
575
A
WAT
17
6
HOH
HOH
576
A
WAT
18
6
HOH
HOH
577
A
WAT
19
6
HOH
HOH
578
A
WAT
20
6
HOH
HOH
579
A
WAT
21
6
HOH
HOH
580
A
WAT
22
6
HOH
HOH
581
A
WAT
23
6
HOH
HOH
582
A
WAT
24
6
HOH
HOH
583
A
WAT
25
6
HOH
HOH
584
A
WAT
26
6
HOH
HOH
585
A
WAT
27
6
HOH
HOH
586
A
WAT
28
6
HOH
HOH
587
A
WAT
29
6
HOH
HOH
588
A
WAT
30
6
HOH
HOH
589
A
WAT
31
6
HOH
HOH
590
A
WAT
32
6
HOH
HOH
591
A
WAT
33
6
HOH
HOH
592
A
WAT
34
6
HOH
HOH
593
A
WAT
35
6
HOH
HOH
594
A
WAT
36
6
HOH
HOH
595
A
WAT
37
6
HOH
HOH
596
A
WAT
38
6
HOH
HOH
597
A
WAT
39
6
HOH
HOH
598
A
WAT
40
6
HOH
HOH
599
A
WAT
41
6
HOH
HOH
600
A
WAT
42
6
HOH
HOH
601
A
WAT
43
6
HOH
HOH
602
A
WAT
44
6
HOH
HOH
603
A
WAT
45
6
HOH
HOH
604
A
WAT
46
6
HOH
HOH
605
A
WAT
47
6
HOH
HOH
606
A
WAT
48
6
HOH
HOH
607
A
WAT
49
6
HOH
HOH
608
A
WAT
50
6
HOH
HOH
609
A
WAT
51
6
HOH
HOH
610
A
WAT
52
6
HOH
HOH
611
A
WAT
53
6
HOH
HOH
612
A
WAT
54
6
HOH
HOH
613
A
WAT
55
6
HOH
HOH
614
A
WAT
56
6
HOH
HOH
615
A
WAT
57
6
HOH
HOH
616
A
WAT
58
6
HOH
HOH
617
A
WAT
59
6
HOH
HOH
618
A
WAT
60
6
HOH
HOH
619
A
WAT
61
6
HOH
HOH
620
A
WAT
62
6
HOH
HOH
621
A
WAT
63
6
HOH
HOH
622
A
WAT
64
6
HOH
HOH
623
A
WAT
65
6
HOH
HOH
624
A
WAT
66
6
HOH
HOH
625
A
WAT
67
6
HOH
HOH
626
A
WAT
68
6
HOH
HOH
627
A
WAT
69
6
HOH
HOH
628
A
WAT
70
6
HOH
HOH
629
A
WAT
71
6
HOH
HOH
630
A
WAT
72
6
HOH
HOH
631
A
WAT
73
6
HOH
HOH
632
A
WAT
74
6
HOH
HOH
633
A
WAT
75
6
HOH
HOH
634
A
WAT
76
6
HOH
HOH
635
A
WAT
77
6
HOH
HOH
636
A
WAT
78
6
HOH
HOH
637
A
WAT
79
6
HOH
HOH
638
A
WAT
80
6
HOH
HOH
639
A
WAT
81
6
HOH
HOH
640
A
WAT
82
6
HOH
HOH
641
A
WAT
83
6
HOH
HOH
642
A
WAT
84
6
HOH
HOH
643
A
WAT
85
6
HOH
HOH
644
A
WAT
86
6
HOH
HOH
645
A
WAT
87
6
HOH
HOH
646
A
WAT
88
6
HOH
HOH
647
A
WAT
89
6
HOH
HOH
648
A
WAT
90
6
HOH
HOH
649
A
WAT
91
6
HOH
HOH
650
A
WAT
92
6
HOH
HOH
651
A
WAT
93
6
HOH
HOH
652
A
WAT
94
6
HOH
HOH
653
A
WAT
95
6
HOH
HOH
654
A
WAT
96
6
HOH
HOH
655
A
WAT
97
6
HOH
HOH
656
A
WAT
98
6
HOH
HOH
657
A
WAT
99
6
HOH
HOH
658
A
WAT
100
6
HOH
HOH
659
A
WAT
101
6
HOH
HOH
660
A
WAT
102
6
HOH
HOH
661
A
WAT
103
6
HOH
HOH
662
A
WAT
104
6
HOH
HOH
663
A
WAT
105
6
HOH
HOH
664
A
WAT
106
6
HOH
HOH
665
A
WAT
107
6
HOH
HOH
666
A
WAT
108
6
HOH
HOH
667
A
WAT
109
6
HOH
HOH
668
A
WAT
110
6
HOH
HOH
669
A
WAT
111
6
HOH
HOH
670
A
WAT
112
6
HOH
HOH
671
A
WAT
113
6
HOH
HOH
672
A
WAT
114
6
HOH
HOH
673
A
WAT
115
6
HOH
HOH
674
A
WAT
116
6
HOH
HOH
675
A
WAT
117
6
HOH
HOH
676
A
WAT
118
6
HOH
HOH
677
A
WAT
119
6
HOH
HOH
678
A
WAT
120
6
HOH
HOH
679
A
WAT
121
6
HOH
HOH
680
A
WAT
122
6
HOH
HOH
681
A
WAT
123
6
HOH
HOH
682
A
WAT
124
6
HOH
HOH
683
A
WAT
125
6
HOH
HOH
684
A
WAT
126
6
HOH
HOH
685
A
WAT
127
6
HOH
HOH
686
A
WAT
128
6
HOH
HOH
687
A
WAT
129
6
HOH
HOH
688
A
WAT
130
6
HOH
HOH
689
A
WAT
131
6
HOH
HOH
690
A
WAT
132
6
HOH
HOH
691
A
WAT
133
6
HOH
HOH
692
A
WAT
134
6
HOH
HOH
693
A
WAT
135
6
HOH
HOH
694
A
WAT
136
6
HOH
HOH
695
A
WAT
137
6
HOH
HOH
696
A
WAT
138
6
HOH
HOH
697
A
WAT
139
6
HOH
HOH
698
A
WAT
140
6
HOH
HOH
699
A
WAT
141
6
HOH
HOH
700
A
WAT
142
6
HOH
HOH
701
A
WAT
143
6
HOH
HOH
702
A
WAT
144
6
HOH
HOH
703
A
WAT
145
6
HOH
HOH
704
A
WAT
146
6
HOH
HOH
705
A
WAT
147
6
HOH
HOH
706
A
WAT
148
6
HOH
HOH
707
A
WAT
149
6
HOH
HOH
708
A
WAT
150
6
HOH
HOH
709
A
WAT
151
6
HOH
HOH
710
A
WAT
152
6
HOH
HOH
711
A
WAT
153
6
HOH
HOH
712
A
WAT
154
6
HOH
HOH
713
A
WAT
155
6
HOH
HOH
714
A
WAT
156
6
HOH
HOH
715
A
WAT
157
6
HOH
HOH
716
A
WAT
158
6
HOH
HOH
717
A
WAT
159
6
HOH
HOH
718
A
WAT
160
6
HOH
HOH
719
A
WAT
161
6
HOH
HOH
720
A
WAT
162
6
HOH
HOH
721
A
WAT
163
6
HOH
HOH
722
A
WAT
164
6
HOH
HOH
723
A
WAT
165
6
HOH
HOH
724
A
WAT
166
6
HOH
HOH
725
A
WAT
167
6
HOH
HOH
726
A
WAT
168
6
HOH
HOH
727
A
WAT
169
6
HOH
HOH
728
A
WAT
170
6
HOH
HOH
729
A
WAT
171
6
HOH
HOH
730
A
WAT
172
6
HOH
HOH
731
A
WAT
173
6
HOH
HOH
732
A
WAT
174
6
HOH
HOH
733
A
WAT
175
6
HOH
HOH
734
A
WAT
176
6
HOH
HOH
735
A
WAT
177
6
HOH
HOH
736
A
WAT
178
6
HOH
HOH
737
A
WAT
179
6
HOH
HOH
738
A
WAT
180
6
HOH
HOH
739
A
WAT
181
6
HOH
HOH
740
A
WAT
182
6
HOH
HOH
741
A
WAT
183
6
HOH
HOH
742
A
WAT
184
6
HOH
HOH
743
A
WAT
185
6
HOH
HOH
744
A
WAT
186
6
HOH
HOH
745
A
WAT
187
6
HOH
HOH
746
A
WAT
188
6
HOH
HOH
747
A
WAT
189
6
HOH
HOH
748
A
WAT
190
6
HOH
HOH
749
A
WAT
191
6
HOH
HOH
750
A
WAT
192
6
HOH
HOH
751
A
WAT
193
6
HOH
HOH
752
A
WAT
194
6
HOH
HOH
753
A
WAT
195
6
HOH
HOH
754
A
WAT
196
6
HOH
HOH
755
A
WAT
197
6
HOH
HOH
756
A
WAT
198
6
HOH
HOH
757
A
WAT
199
6
HOH
HOH
758
A
WAT
200
6
HOH
HOH
759
A
WAT
201
6
HOH
HOH
760
A
WAT
202
6
HOH
HOH
761
A
WAT
203
6
HOH
HOH
762
A
WAT
204
6
HOH
HOH
763
A
WAT
205
6
HOH
HOH
764
A
WAT
206
6
HOH
HOH
765
A
WAT
207
6
HOH
HOH
766
A
WAT
208
6
HOH
HOH
767
A
WAT
209
6
HOH
HOH
768
A
WAT
210
6
HOH
HOH
769
A
WAT
211
6
HOH
HOH
770
A
WAT
212
6
HOH
HOH
771
A
WAT
213
6
HOH
HOH
772
A
WAT
214
6
HOH
HOH
773
A
WAT
215
6
HOH
HOH
774
A
WAT
216
6
HOH
HOH
775
A
WAT
217
6
HOH
HOH
776
A
WAT
218
6
HOH
HOH
777
A
WAT
219
6
HOH
HOH
778
A
WAT
220
6
HOH
HOH
779
A
WAT
221
6
HOH
HOH
780
A
WAT
222
6
HOH
HOH
781
A
WAT
223
6
HOH
HOH
782
A
WAT
224
6
HOH
HOH
783
A
WAT
225
6
HOH
HOH
784
A
WAT
226
6
HOH
HOH
785
A
WAT
227
6
HOH
HOH
786
A
WAT
228
6
HOH
HOH
787
A
WAT
229
6
HOH
HOH
788
A
WAT
230
6
HOH
HOH
789
A
WAT
231
6
HOH
HOH
790
A
WAT
232
6
HOH
HOH
791
A
WAT
233
6
HOH
HOH
792
A
WAT
234
6
HOH
HOH
793
A
WAT
235
6
HOH
HOH
794
A
WAT
236
6
HOH
HOH
795
A
WAT
237
6
HOH
HOH
796
A
WAT
238
6
HOH
HOH
797
A
WAT
239
6
HOH
HOH
798
A
WAT
240
6
HOH
HOH
799
A
WAT
241
6
HOH
HOH
800
A
WAT
242
6
HOH
HOH
801
A
WAT
243
6
HOH
HOH
802
A
WAT
244
6
HOH
HOH
803
A
WAT
245
6
HOH
HOH
804
A
WAT
246
6
HOH
HOH
805
A
WAT
247
6
HOH
HOH
806
A
WAT
248
6
HOH
HOH
807
A
WAT
249
6
HOH
HOH
808
A
WAT
250
6
HOH
HOH
809
A
WAT
251
6
HOH
HOH
810
A
WAT
252
6
HOH
HOH
811
A
WAT
253
6
HOH
HOH
812
A
WAT
254
6
HOH
HOH
813
A
WAT
255
6
HOH
HOH
814
A
WAT
256
6
HOH
HOH
815
A
WAT
257
6
HOH
HOH
816
A
WAT
258
6
HOH
HOH
817
A
WAT
259
6
HOH
HOH
818
A
WAT
260
6
HOH
HOH
819
A
WAT
261
6
HOH
HOH
820
A
WAT
262
6
HOH
HOH
821
A
WAT
263
6
HOH
HOH
822
A
WAT
264
6
HOH
HOH
823
A
WAT
265
6
HOH
HOH
824
A
WAT
266
6
HOH
HOH
825
A
WAT
267
6
HOH
HOH
826
A
WAT
268
6
HOH
HOH
827
A
WAT
269
6
HOH
HOH
828
A
WAT
270
6
HOH
HOH
829
A
WAT
271
6
HOH
HOH
830
A
WAT
272
6
HOH
HOH
831
A
WAT
273
6
HOH
HOH
832
A
WAT
274
6
HOH
HOH
833
A
WAT
275
6
HOH
HOH
834
A
WAT
276
6
HOH
HOH
835
A
WAT
277
6
HOH
HOH
836
A
WAT
278
6
HOH
HOH
837
A
WAT
279
6
HOH
HOH
838
A
WAT
280
6
HOH
HOH
839
A
WAT
281
6
HOH
HOH
840
A
WAT
282
6
HOH
HOH
841
A
WAT
283
6
HOH
HOH
842
A
WAT
284
6
HOH
HOH
843
A
WAT
285
6
HOH
HOH
844
A
WAT
286
6
HOH
HOH
845
A
WAT
287
6
HOH
HOH
846
A
WAT
288
6
HOH
HOH
847
A
WAT
289
6
HOH
HOH
848
A
WAT
290
6
HOH
HOH
849
A
WAT
291
6
HOH
HOH
850
A
WAT
292
6
HOH
HOH
851
A
WAT
293
6
HOH
HOH
852
A
WAT
294
6
HOH
HOH
853
A
WAT
295
6
HOH
HOH
854
A
WAT
296
6
HOH
HOH
855
A
WAT
297
6
HOH
HOH
856
A
WAT
298
6
HOH
HOH
857
A
WAT
299
6
HOH
HOH
858
A
WAT
300
6
HOH
HOH
859
A
WAT
301
6
HOH
HOH
860
A
WAT
302
6
HOH
HOH
861
A
WAT
303
6
HOH
HOH
862
A
WAT
304
6
HOH
HOH
863
A
WAT
305
6
HOH
HOH
864
A
WAT
306
6
HOH
HOH
865
A
WAT
307
6
HOH
HOH
866
A
WAT
308
6
HOH
HOH
867
A
WAT
309
6
HOH
HOH
868
A
WAT
310
6
HOH
HOH
869
A
WAT
311
6
HOH
HOH
870
A
WAT
312
6
HOH
HOH
871
A
WAT
313
6
HOH
HOH
872
A
WAT
314
6
HOH
HOH
873
A
WAT
315
6
HOH
HOH
874
A
WAT
316
6
HOH
HOH
875
A
WAT
317
6
HOH
HOH
876
A
WAT
318
6
HOH
HOH
877
A
WAT
319
6
HOH
HOH
878
A
WAT
320
6
HOH
HOH
879
A
WAT
321
6
HOH
HOH
880
A
WAT
322
6
HOH
HOH
881
A
WAT
323
6
HOH
HOH
882
A
WAT
324
6
HOH
HOH
883
A
WAT
325
6
HOH
HOH
884
A
WAT
326
6
HOH
HOH
885
A
WAT
327
6
HOH
HOH
886
A
WAT
328
6
HOH
HOH
887
A
WAT
329
6
HOH
HOH
888
A
WAT
330
6
HOH
HOH
889
A
WAT
331
6
HOH
HOH
890
A
WAT
332
6
HOH
HOH
891
A
WAT
333
6
HOH
HOH
892
A
WAT
334
6
HOH
HOH
893
A
WAT
335
6
HOH
HOH
894
A
WAT
336
6
HOH
HOH
895
A
WAT
337
6
HOH
HOH
896
A
WAT
338
6
HOH
HOH
897
A
WAT
339
6
HOH
HOH
898
A
WAT
340
6
HOH
HOH
899
A
WAT
341
6
HOH
HOH
900
A
WAT
342
6
HOH
HOH
901
A
WAT
343
6
HOH
HOH
902
A
WAT
344
6
HOH
HOH
903
A
WAT
345
6
HOH
HOH
904
A
WAT
346
6
HOH
HOH
905
A
WAT
347
6
HOH
HOH
906
A
WAT
348
6
HOH
HOH
907
A
WAT
349
6
HOH
HOH
908
A
WAT
350
6
HOH
HOH
909
A
WAT
351
6
HOH
HOH
910
A
WAT
352
6
HOH
HOH
911
A
WAT
353
6
HOH
HOH
912
A
WAT
354
6
HOH
HOH
913
A
WAT
355
6
HOH
HOH
914
A
WAT
356
6
HOH
HOH
915
A
WAT
357
6
HOH
HOH
916
A
WAT
358
6
HOH
HOH
917
A
WAT
359
6
HOH
HOH
918
A
WAT
360
6
HOH
HOH
919
A
WAT
361
6
HOH
HOH
920
A
WAT
362
6
HOH
HOH
921
A
WAT
363
6
HOH
HOH
922
A
WAT
364
6
HOH
HOH
923
A
WAT
365
6
HOH
HOH
924
A
WAT
366
6
HOH
HOH
925
A
WAT
367
6
HOH
HOH
926
A
WAT
368
6
HOH
HOH
927
A
WAT
369
6
HOH
HOH
928
A
WAT
370
6
HOH
HOH
929
A
WAT
371
6
HOH
HOH
930
A
WAT
372
6
HOH
HOH
931
A
WAT
373
6
HOH
HOH
932
A
WAT
374
6
HOH
HOH
933
A
WAT
375
6
HOH
HOH
934
A
WAT
376
6
HOH
HOH
935
A
WAT
377
6
HOH
HOH
936
A
WAT
378
6
HOH
HOH
937
A
WAT
379
6
HOH
HOH
938
A
WAT
380
6
HOH
HOH
939
A
WAT
381
6
HOH
HOH
940
A
WAT
382
6
HOH
HOH
941
A
WAT
383
6
HOH
HOH
942
A
WAT
384
6
HOH
HOH
943
A
WAT
385
6
HOH
HOH
944
A
WAT
386
6
HOH
HOH
945
A
WAT
387
6
HOH
HOH
946
A
WAT
388
6
HOH
HOH
947
A
n
1
1
A
PRO
2
n
2
PRO
2
A
HIS
3
n
3
HIS
3
A
SER
4
n
4
SER
4
A
LEU
5
n
5
LEU
5
A
PHE
6
n
6
PHE
6
A
SER
7
n
7
SER
7
A
THR
8
n
8
THR
8
A
ASP
9
n
9
ASP
9
A
THR
10
n
10
THR
10
A
ASP
11
n
11
ASP
11
A
LEU
12
n
12
LEU
12
A
THR
13
n
13
THR
13
A
ALA
14
n
14
ALA
14
A
GLU
15
n
15
GLU
15
A
ASN
16
n
16
ASN
16
A
LEU
17
n
17
LEU
17
A
LEU
18
n
18
LEU
18
A
ARG
19
n
19
ARG
19
A
LEU
20
n
20
LEU
20
A
PRO
21
n
21
PRO
21
A
ALA
22
n
22
ALA
22
A
GLU
23
n
23
GLU
23
A
PHE
24
n
24
PHE
24
A
GLY
25
n
25
GLY
25
A
CYS
26
n
26
CYS
26
A
PRO
27
n
27
PRO
27
A
VAL
28
n
28
VAL
28
A
TRP
29
n
29
TRP
29
A
VAL
30
n
30
VAL
30
A
TYR
31
n
31
TYR
31
A
ASP
32
n
32
ASP
32
A
ALA
33
n
33
ALA
33
A
GLN
34
n
34
GLN
34
A
ILE
35
n
35
ILE
35
A
ILE
36
n
36
ILE
36
A
ARG
37
n
37
ARG
37
A
ARG
38
n
38
ARG
38
A
GLN
39
n
39
GLN
39
A
ILE
40
n
40
ILE
40
A
ALA
41
n
41
ALA
41
A
ALA
42
n
42
ALA
42
A
LEU
43
n
43
LEU
43
A
LYS
44
n
44
LYS
44
A
GLN
45
n
45
GLN
45
A
PHE
46
n
46
PHE
46
A
ASP
47
n
47
ASP
47
A
VAL
48
n
48
VAL
48
A
VAL
49
n
49
VAL
49
A
ARG
50
n
50
ARG
50
A
PHE
51
n
51
PHE
51
A
ALA
52
n
52
ALA
52
A
GLN
53
n
53
GLN
53
A
LYS
54
n
54
LYS
54
A
ALA
55
n
55
ALA
55
A
CYS
56
n
56
CYS
56
A
SER
57
n
57
SER
57
A
ASN
58
n
58
ASN
58
A
ILE
59
n
59
ILE
59
A
HIS
60
n
60
HIS
60
A
ILE
61
n
61
ILE
61
A
LEU
62
n
62
LEU
62
A
ARG
63
n
63
ARG
63
A
LEU
64
n
64
LEU
64
A
MET
65
n
65
MET
65
A
ARG
66
n
66
ARG
66
A
GLU
67
n
67
GLU
67
A
GLN
68
n
68
GLN
68
A
GLY
69
n
69
GLY
69
A
VAL
70
n
70
VAL
70
A
LYS
71
n
71
LYS
71
A
VAL
72
n
72
VAL
72
A
ASP
73
n
73
ASP
73
A
SER
74
n
74
SER
74
A
VAL
75
n
75
VAL
75
A
SER
76
n
76
SER
76
A
LEU
77
n
77
LEU
77
A
GLY
78
n
78
GLY
78
A
GLU
79
n
79
GLU
79
A
ILE
80
n
80
ILE
80
A
GLU
81
n
81
GLU
81
A
ARG
82
n
82
ARG
82
A
ALA
83
n
83
ALA
83
A
LEU
84
n
84
LEU
84
A
ALA
85
n
85
ALA
85
A
ALA
86
n
86
ALA
86
A
GLY
87
n
87
GLY
87
A
TYR
88
n
88
TYR
88
A
ASN
89
n
89
ASN
89
A
PRO
90
n
90
PRO
90
A
GLN
91
n
91
GLN
91
A
THR
92
n
92
THR
92
A
HIS
93
n
93
HIS
93
A
PRO
94
n
94
PRO
94
A
ASP
95
n
95
ASP
95
A
ASP
96
n
96
ASP
96
A
ILE
97
n
97
ILE
97
A
VAL
98
n
98
VAL
98
A
PHE
99
n
99
PHE
99
A
THR
100
n
100
THR
100
A
ALA
101
n
101
ALA
101
A
ASP
102
n
102
ASP
102
A
VAL
103
n
103
VAL
103
A
ILE
104
n
104
ILE
104
A
ASP
105
n
105
ASP
105
A
GLN
106
n
106
GLN
106
A
ALA
107
n
107
ALA
107
A
THR
108
n
108
THR
108
A
LEU
109
n
109
LEU
109
A
GLU
110
n
110
GLU
110
A
ARG
111
n
111
ARG
111
A
VAL
112
n
112
VAL
112
A
SER
113
n
113
SER
113
A
GLU
114
n
114
GLU
114
A
LEU
115
n
115
LEU
115
A
GLN
116
n
116
GLN
116
A
ILE
117
n
117
ILE
117
A
PRO
118
n
118
PRO
118
A
VAL
119
n
119
VAL
119
A
ASN
120
n
120
ASN
120
A
ALA
121
n
121
ALA
121
A
GLY
122
n
122
GLY
122
A
SER
123
n
123
SER
123
A
VAL
124
n
124
VAL
124
A
ASP
125
n
125
ASP
125
A
MET
126
n
126
MET
126
A
LEU
127
n
127
LEU
127
A
ASP
128
n
128
ASP
128
A
GLN
129
n
129
GLN
129
A
LEU
130
n
130
LEU
130
A
GLY
131
n
131
GLY
131
A
GLN
132
n
132
GLN
132
A
VAL
133
n
133
VAL
133
A
SER
134
n
134
SER
134
A
PRO
135
n
135
PRO
135
A
GLY
136
n
136
GLY
136
A
HIS
137
n
137
HIS
137
A
ARG
138
n
138
ARG
138
A
VAL
139
n
139
VAL
139
A
TRP
140
n
140
TRP
140
A
LEU
141
n
141
LEU
141
A
ARG
142
n
142
ARG
142
A
VAL
143
n
143
VAL
143
A
ASN
144
n
144
ASN
144
A
PRO
145
n
145
PRO
145
A
GLY
146
n
146
GLY
146
A
PHE
147
n
147
PHE
147
A
GLY
148
n
148
GLY
148
A
HIS
149
n
149
HIS
149
A
GLY
150
n
150
GLY
150
A
HIS
151
n
151
HIS
151
A
SER
152
n
152
SER
152
A
GLN
153
n
153
GLN
153
A
LYS
154
n
154
LYS
154
A
THR
155
n
155
THR
155
A
ASN
156
n
156
ASN
156
A
THR
157
n
157
THR
157
A
GLY
158
n
158
GLY
158
A
GLY
159
n
159
GLY
159
A
GLU
160
n
160
GLU
160
A
ASN
161
n
161
ASN
161
A
SER
162
n
162
SER
162
A
LYS
163
n
163
LYS
163
A
HIS
164
n
164
HIS
164
A
GLY
165
n
165
GLY
165
A
ILE
166
n
166
ILE
166
A
TRP
167
n
167
TRP
167
A
TYR
168
n
168
TYR
168
A
THR
169
n
169
THR
169
A
ASP
170
n
170
ASP
170
A
LEU
171
n
171
LEU
171
A
PRO
172
n
172
PRO
172
A
ALA
173
n
173
ALA
173
A
ALA
174
n
174
ALA
174
A
LEU
175
n
175
LEU
175
A
ASP
176
n
176
ASP
176
A
VAL
177
n
177
VAL
177
A
ILE
178
n
178
ILE
178
A
GLN
179
n
179
GLN
179
A
ARG
180
n
180
ARG
180
A
HIS
181
n
181
HIS
181
A
HIS
182
n
182
HIS
182
A
LEU
183
n
183
LEU
183
A
GLN
184
n
184
GLN
184
A
LEU
185
n
185
LEU
185
A
VAL
186
n
186
VAL
186
A
GLY
187
n
187
GLY
187
A
ILE
188
n
188
ILE
188
A
HIS
189
n
189
HIS
189
A
MET
190
n
190
MET
190
A
HIS
191
n
191
HIS
191
A
ILE
192
n
192
ILE
192
A
GLY
193
n
193
GLY
193
A
SER
194
n
194
SER
194
A
GLY
195
n
195
GLY
195
A
VAL
196
n
196
VAL
196
A
ASP
197
n
197
ASP
197
A
TYR
198
n
198
TYR
198
A
ALA
199
n
199
ALA
199
A
HIS
200
n
200
HIS
200
A
LEU
201
n
201
LEU
201
A
GLU
202
n
202
GLU
202
A
GLN
203
n
203
GLN
203
A
VAL
204
n
204
VAL
204
A
CYS
205
n
205
CYS
205
A
GLY
206
n
206
GLY
206
A
ALA
207
n
207
ALA
207
A
MET
208
n
208
MET
208
A
VAL
209
n
209
VAL
209
A
ARG
210
n
210
ARG
210
A
GLN
211
n
211
GLN
211
A
VAL
212
n
212
VAL
212
A
ILE
213
n
213
ILE
213
A
GLU
214
n
214
GLU
214
A
PHE
215
n
215
PHE
215
A
GLY
216
n
216
GLY
216
A
GLN
217
n
217
GLN
217
A
ASP
218
n
218
ASP
218
A
LEU
219
n
219
LEU
219
A
GLN
220
n
220
GLN
220
A
ALA
221
n
221
ALA
221
A
ILE
222
n
222
ILE
222
A
SER
223
n
223
SER
223
A
ALA
224
n
224
ALA
224
A
GLY
225
n
225
GLY
225
A
GLY
226
n
226
GLY
226
A
GLY
227
n
227
GLY
227
A
LEU
228
n
228
LEU
228
A
SER
229
n
229
SER
229
A
VAL
230
n
230
VAL
230
A
PRO
231
n
231
PRO
231
A
TYR
232
n
232
TYR
232
A
GLN
233
n
233
GLN
233
A
GLN
234
n
234
GLN
234
A
GLY
235
n
235
GLY
235
A
GLU
236
n
236
GLU
236
A
GLU
237
n
237
GLU
237
A
ALA
238
n
238
ALA
238
A
VAL
239
n
239
VAL
239
A
ASP
240
n
240
ASP
240
A
THR
241
n
241
THR
241
A
GLU
242
n
242
GLU
242
A
HIS
243
n
243
HIS
243
A
TYR
244
n
244
TYR
244
A
TYR
245
n
245
TYR
245
A
GLY
246
n
246
GLY
246
A
LEU
247
n
247
LEU
247
A
TRP
248
n
248
TRP
248
A
ASN
249
n
249
ASN
249
A
ALA
250
n
250
ALA
250
A
ALA
251
n
251
ALA
251
A
ARG
252
n
252
ARG
252
A
GLU
253
n
253
GLU
253
A
GLN
254
n
254
GLN
254
A
ILE
255
n
255
ILE
255
A
ALA
256
n
256
ALA
256
A
ARG
257
n
257
ARG
257
A
HIS
258
n
258
HIS
258
A
LEU
259
n
259
LEU
259
A
GLY
260
n
260
GLY
260
A
HIS
261
n
261
HIS
261
A
PRO
262
n
262
PRO
262
A
VAL
263
n
263
VAL
263
A
LYS
264
n
264
LYS
264
A
LEU
265
n
265
LEU
265
A
GLU
266
n
266
GLU
266
A
ILE
267
n
267
ILE
267
A
GLU
268
n
268
GLU
268
A
PRO
269
n
269
PRO
269
A
GLY
270
n
270
GLY
270
A
ARG
271
n
271
ARG
271
A
PHE
272
n
272
PHE
272
A
LEU
273
n
273
LEU
273
A
VAL
274
n
274
VAL
274
A
ALA
275
n
275
ALA
275
A
GLN
276
n
276
GLN
276
A
SER
277
n
277
SER
277
A
GLY
278
n
278
GLY
278
A
VAL
279
n
279
VAL
279
A
LEU
280
n
280
LEU
280
A
ILE
281
n
281
ILE
281
A
THR
282
n
282
THR
282
A
GLN
283
n
283
GLN
283
A
VAL
284
n
284
VAL
284
A
ARG
285
n
285
ARG
285
A
SER
286
n
286
SER
286
A
VAL
287
n
287
VAL
287
A
LYS
288
n
288
LYS
288
A
GLN
289
n
289
GLN
289
A
MET
290
n
290
MET
290
A
GLY
291
n
291
GLY
291
A
SER
292
n
292
SER
292
A
ARG
293
n
293
ARG
293
A
HIS
294
n
294
HIS
294
A
PHE
295
n
295
PHE
295
A
VAL
296
n
296
VAL
296
A
LEU
297
n
297
LEU
297
A
VAL
298
n
298
VAL
298
A
ASP
299
n
299
ASP
299
A
ALA
300
n
300
ALA
300
A
GLY
301
n
301
GLY
301
A
PHE
302
n
302
PHE
302
A
ASN
303
n
303
ASN
303
A
ASP
304
n
304
ASP
304
A
LEU
305
n
305
LEU
305
A
MET
306
n
306
MET
306
A
ARG
307
n
307
ARG
307
A
PRO
308
n
308
PRO
308
A
ALA
309
n
309
ALA
309
A
MET
310
n
310
MET
310
A
TYR
311
n
311
TYR
311
A
GLY
312
n
312
GLY
312
A
SER
313
n
313
SER
313
A
TYR
314
n
314
TYR
314
A
HIS
315
n
315
HIS
315
A
HIS
316
n
316
HIS
316
A
ILE
317
n
317
ILE
317
A
SER
318
n
318
SER
318
A
ALA
319
n
319
ALA
319
A
LEU
320
n
320
LEU
320
A
ALA
321
n
321
ALA
321
A
ALA
322
n
322
ALA
322
A
ASP
323
n
323
ASP
323
A
GLY
324
n
324
GLY
324
A
ARG
325
n
325
ARG
325
A
SER
326
n
326
SER
326
A
LEU
327
n
327
LEU
327
A
GLU
328
n
328
GLU
328
A
HIS
329
n
329
HIS
329
A
ALA
330
n
330
ALA
330
A
PRO
331
n
331
PRO
331
A
THR
332
n
332
THR
332
A
VAL
333
n
333
VAL
333
A
GLU
334
n
334
GLU
334
A
THR
335
n
335
THR
335
A
VAL
336
n
336
VAL
336
A
VAL
337
n
337
VAL
337
A
ALA
338
n
338
ALA
338
A
GLY
339
n
339
GLY
339
A
PRO
340
n
340
PRO
340
A
LEU
341
n
341
LEU
341
A
CYS
342
n
342
CYS
342
A
GLU
343
n
343
GLU
343
A
SER
344
n
344
SER
344
A
GLY
345
n
345
GLY
345
A
ASP
346
n
346
ASP
346
A
VAL
347
n
347
VAL
347
A
PHE
348
n
348
PHE
348
A
THR
349
n
349
THR
349
A
GLN
350
n
350
GLN
350
A
GLN
351
n
351
GLN
351
A
GLU
352
n
352
GLU
352
A
GLY
353
n
353
GLY
353
A
GLY
354
n
354
GLY
354
A
ASN
355
n
355
ASN
355
A
VAL
356
n
356
VAL
356
A
GLU
357
n
357
GLU
357
A
THR
358
n
358
THR
358
A
ARG
359
n
359
ARG
359
A
ALA
360
n
360
ALA
360
A
LEU
361
n
361
LEU
361
A
PRO
362
n
362
PRO
362
A
GLU
363
n
363
GLU
363
A
VAL
364
n
364
VAL
364
A
LYS
365
n
365
LYS
365
A
ALA
366
n
366
ALA
366
A
GLY
367
n
367
GLY
367
A
ASP
368
n
368
ASP
368
A
TYR
369
n
369
TYR
369
A
LEU
370
n
370
LEU
370
A
VAL
371
n
371
VAL
371
A
LEU
372
n
372
LEU
372
A
HIS
373
n
373
HIS
373
A
ASP
374
n
374
ASP
374
A
THR
375
n
375
THR
375
A
GLY
376
n
376
GLY
376
A
ALA
377
n
377
ALA
377
A
TYR
378
n
378
TYR
378
A
GLY
379
n
379
GLY
379
A
ALA
380
n
380
ALA
380
A
SER
381
n
381
SER
381
A
MET
382
n
382
MET
382
A
SER
383
n
383
SER
383
A
SER
384
n
384
SER
384
A
ASN
385
n
385
ASN
385
A
TYR
386
n
386
TYR
386
A
ASN
387
n
387
ASN
387
A
SER
388
n
388
SER
388
A
ARG
389
n
389
ARG
389
A
PRO
390
n
390
PRO
390
A
LEU
391
n
391
LEU
391
A
LEU
392
n
392
LEU
392
A
PRO
393
n
393
PRO
393
A
GLU
394
n
394
GLU
394
A
VAL
395
n
395
VAL
395
A
LEU
396
n
396
LEU
396
A
PHE
397
n
397
PHE
397
A
ASP
398
n
398
ASP
398
A
ASN
399
n
399
ASN
399
A
GLY
400
n
400
GLY
400
A
GLN
401
n
401
GLN
401
A
ALA
402
n
402
ALA
402
A
ARG
403
n
403
ARG
403
A
LEU
404
n
404
LEU
404
A
ILE
405
n
405
ILE
405
A
ARG
406
n
406
ARG
406
A
ARG
407
n
407
ARG
407
A
ARG
408
n
408
ARG
408
A
GLN
409
n
409
GLN
409
A
THR
410
n
410
THR
410
A
ILE
411
n
411
ILE
411
A
GLU
412
n
412
GLU
412
A
GLU
413
n
413
GLU
413
A
LEU
414
n
414
LEU
414
A
LEU
415
n
415
LEU
415
A
ALA
416
n
416
ALA
416
A
LEU
417
n
417
LEU
417
A
GLU
418
n
418
GLU
418
A
LEU
419
n
419
LEU
419
A
LEU
420
n
420
LEU
420
A
HIS
421
n
421
HIS
421
A
HIS
422
n
422
HIS
422
A
n
423
423
A
n
424
424
A
n
425
425
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
10710
-61
28560
A
HOH
645
G
O
HOH
1_555
A
LI
530
C
LI
LI
1_555
A
LYS
154
A
O
LYS
154
1_555
117.4
A
HOH
645
G
O
HOH
1_555
A
LI
530
C
LI
LI
1_555
A
HIS
151
A
O
HIS
151
1_555
154.1
A
LYS
154
A
O
LYS
154
1_555
A
LI
530
C
LI
LI
1_555
A
HIS
151
A
O
HIS
151
1_555
88.5
A
HOH
645
G
O
HOH
1_555
A
LI
530
C
LI
LI
1_555
A
SER
152
A
O
SER
152
1_555
89.4
A
LYS
154
A
O
LYS
154
1_555
A
LI
530
C
LI
LI
1_555
A
SER
152
A
O
SER
152
1_555
105.2
A
HIS
151
A
O
HIS
151
1_555
A
LI
530
C
LI
LI
1_555
A
SER
152
A
O
SER
152
1_555
82.5
A
HOH
645
G
O
HOH
1_555
A
LI
530
C
LI
LI
1_555
A
ASN
156
A
OD1
ASN
156
1_555
87.6
A
LYS
154
A
O
LYS
154
1_555
A
LI
530
C
LI
LI
1_555
A
ASN
156
A
OD1
ASN
156
1_555
107.7
A
HIS
151
A
O
HIS
151
1_555
A
LI
530
C
LI
LI
1_555
A
ASN
156
A
OD1
ASN
156
1_555
84.9
A
SER
152
A
O
SER
152
1_555
A
LI
530
C
LI
LI
1_555
A
ASN
156
A
OD1
ASN
156
1_555
144.3
A
SER
384
A
O
SER
384
1_555
A
LI
540
D
LI
LI
1_555
A
HOH
590
G
O
HOH
1_555
115.0
A
SER
384
A
O
SER
384
1_555
A
LI
540
D
LI
LI
1_555
A
ASN
303
A
ND2
ASN
303
1_555
69.2
A
HOH
590
G
O
HOH
1_555
A
LI
540
D
LI
LI
1_555
A
ASN
303
A
ND2
ASN
303
1_555
86.3
A
SER
384
A
O
SER
384
1_555
A
LI
540
D
LI
LI
1_555
A
PRO
390
A
O
PRO
390
1_555
161.9
A
HOH
590
G
O
HOH
1_555
A
LI
540
D
LI
LI
1_555
A
PRO
390
A
O
PRO
390
1_555
80.3
A
ASN
303
A
ND2
ASN
303
1_555
A
LI
540
D
LI
LI
1_555
A
PRO
390
A
O
PRO
390
1_555
104.0
A
SER
384
A
O
SER
384
1_555
A
LI
540
D
LI
LI
1_555
A
ARG
389
A
O
ARG
389
1_555
89.6
A
HOH
590
G
O
HOH
1_555
A
LI
540
D
LI
LI
1_555
A
ARG
389
A
O
ARG
389
1_555
150.3
A
ASN
303
A
ND2
ASN
303
1_555
A
LI
540
D
LI
LI
1_555
A
ARG
389
A
O
ARG
389
1_555
87.5
A
PRO
390
A
O
PRO
390
1_555
A
LI
540
D
LI
LI
1_555
A
ARG
389
A
O
ARG
389
1_555
73.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_665
-y+1,-x+1,-z+5/6
crystal symmetry operation
49.2900000000
85.3727843051
147.4583333333
A
N
ILE
405
A
N
ILE
405
A
O
GLU
394
A
O
GLU
394
A
N
VAL
395
A
N
VAL
395
A
O
TRP
29
A
O
TRP
29
A
O
VAL
30
A
O
VAL
30
A
N
VAL
279
A
N
VAL
279
A
O
THR
282
A
O
THR
282
A
N
LEU
370
A
N
LEU
370
A
N
VAL
371
A
N
VAL
371
A
O
SER
318
A
O
SER
318
A
N
LEU
320
A
N
LEU
320
A
O
TYR
369
A
O
TYR
369
A
N
LEU
372
A
N
LEU
372
A
O
LEU
280
A
O
LEU
280
A
N
MET
290
A
N
MET
290
A
O
ARG
293
A
O
ARG
293
A
O
HIS
294
A
O
HIS
294
A
N
VAL
336
A
N
VAL
336
A
N
THR
335
A
N
THR
335
A
O
ARG
359
A
O
ARG
359
A
N
PHE
51
A
N
PHE
51
A
O
LYS
71
A
O
LYS
71
A
N
SER
74
A
N
SER
74
A
O
VAL
98
A
O
VAL
98
A
O
PHE
99
A
O
PHE
99
A
N
ASN
120
A
N
ASN
120
A
N
VAL
119
A
N
VAL
119
A
O
ARG
138
A
O
ARG
138
A
O
ARG
142
A
O
ARG
142
A
N
ILE
166
A
N
ILE
166
A
N
ILE
166
A
N
ILE
166
A
O
ARG
142
A
O
ARG
142
A
N
VAL
139
A
N
VAL
139
A
O
GLN
184
A
O
GLN
184
A
O
VAL
186
A
O
VAL
186
A
N
ALA
221
A
N
ALA
221
A
N
ILE
222
A
N
ILE
222
A
O
LYS
264
A
O
LYS
264
A
N
ILE
267
A
N
ILE
267
A
O
VAL
48
A
O
VAL
48
1
A
MET
1
A
MET
1
1
Y
1
A
HIS
423
A
HIS
423
1
Y
1
A
HIS
424
A
HIS
424
1
Y
1
A
HIS
425
A
HIS
425
1
Y
1
A
LEU
392
-10.53
1
A
HIS
421
11.11
1
A
CYS
56
-175.44
101.89
1
A
ASN
161
-99.42
34.62
1
A
ILE
192
-122.52
-52.52
1
A
GLN
234
-36.55
125.07
1
A
THR
349
-100.26
78.56
1
A
HIS
421
-174.21
57.83
20.7
0.22
0.173
2.10
10
1495
29454
29454
98
Random
1
0
MIR
2.10
10
393
3691
34
0
3264
0.012
0.010
0.015
0.252
0.179
2.186
146
2775
20.7
2.1
20.0
1KNW
29807
-3
0.068
0.068
1
27.8
10.2
98.0
0.206
2.10
2.17
4.1
0.206
1
4
73.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
MLPHARE
refinement
REFMAC
Diaminopimelate decarboxylase (E.C.4.1.1.20)
Crystal structure of diaminopimelate decarboxylase
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
The active biological entity is a homodimer. The second monomer is generated from the asymmetryic unit by the operation: -Y,-X,5/6-Z
A
THR
13
A
THR
13
HELX_P
A
GLY
25
A
GLY
25
1
1
13
A
ALA
33
A
ALA
33
HELX_P
A
ALA
42
A
ALA
42
1
2
10
A
LYS
54
A
LYS
54
HELX_P
A
CYS
56
A
CYS
56
5
3
3
A
ASN
58
A
ASN
58
HELX_P
A
GLN
68
A
GLN
68
1
4
11
A
SER
76
A
SER
76
HELX_P
A
ALA
86
A
ALA
86
1
5
11
A
ASP
105
A
ASP
105
HELX_P
A
GLN
116
A
GLN
116
1
6
12
A
SER
123
A
SER
123
HELX_P
A
SER
134
A
SER
134
1
7
12
A
ASP
170
A
ASP
170
HELX_P
A
HIS
181
A
HIS
181
1
8
12
A
ASP
197
A
ASP
197
HELX_P
A
GLY
216
A
GLY
216
1
9
20
A
ASP
240
A
ASP
240
HELX_P
A
GLY
260
A
GLY
260
1
10
21
A
GLY
270
A
GLY
270
HELX_P
A
ALA
275
A
ALA
275
1
11
6
A
MET
306
A
MET
306
HELX_P
A
GLY
312
A
GLY
312
1
12
7
A
GLY
379
A
GLY
379
HELX_P
A
SER
383
A
SER
383
5
13
5
A
THR
410
A
THR
410
HELX_P
A
ALA
416
A
ALA
416
1
14
7
covale
1.307
A
LYS
54
A
NZ
LYS
54
1_555
A
PLP
554
E
C4A
PLP
1_555
metalc
2.742
A
LI
530
C
LI
LI
1_555
A
HOH
645
G
O
HOH
1_555
metalc
2.749
A
LI
530
C
LI
LI
1_555
A
LYS
154
A
O
LYS
154
1_555
metalc
2.928
A
LI
530
C
LI
LI
1_555
A
HIS
151
A
O
HIS
151
1_555
metalc
2.910
A
LI
530
C
LI
LI
1_555
A
SER
152
A
O
SER
152
1_555
metalc
2.762
A
LI
530
C
LI
LI
1_555
A
ASN
156
A
OD1
ASN
156
1_555
metalc
2.655
A
LI
540
D
LI
LI
1_555
A
SER
384
A
O
SER
384
1_555
metalc
2.715
A
LI
540
D
LI
LI
1_555
A
HOH
590
G
O
HOH
1_555
metalc
3.132
A
LI
540
D
LI
LI
1_555
A
ASN
303
A
ND2
ASN
303
1_555
metalc
3.063
A
LI
540
D
LI
LI
1_555
A
PRO
390
A
O
PRO
390
1_555
metalc
2.962
A
LI
540
D
LI
LI
1_555
A
ARG
389
A
O
ARG
389
1_555
LYASE
pyridoxal-phosphate, decarboxylation, diaminopimelate, lysine, TIM-barrel, LYASE
A
CYS
26
A
CYS
26
1
A
PRO
27
A
PRO
27
2.48
DCDA_ECOLI
UNP
1
1
P00861
MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI
ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD
TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISAL
AADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNG
QARLIRRRQTIEELLALELL
1
420
1KNW
1
420
P00861
A
1
1
420
1
EXPRESSION TAG
HIS
421
1KNW
A
P00861
UNP
421
1
EXPRESSION TAG
HIS
422
1KNW
A
P00861
UNP
422
1
EXPRESSION TAG
HIS
423
1KNW
A
P00861
UNP
423
1
EXPRESSION TAG
HIS
424
1KNW
A
P00861
UNP
424
1
EXPRESSION TAG
HIS
425
1KNW
A
P00861
UNP
425
11
11
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
GLN
401
A
GLN
401
A
ARG
406
A
ARG
406
A
GLU
394
A
GLU
394
A
ASP
398
A
ASP
398
A
VAL
28
A
VAL
28
A
ASP
32
A
ASP
32
A
GLY
278
A
GLY
278
A
MET
290
A
MET
290
A
TYR
369
A
TYR
369
A
LEU
372
A
LEU
372
A
ILE
317
A
ILE
317
A
LEU
320
A
LEU
320
A
TYR
369
A
TYR
369
A
LEU
372
A
LEU
372
A
GLY
278
A
GLY
278
A
MET
290
A
MET
290
A
ARG
293
A
ARG
293
A
VAL
298
A
VAL
298
A
THR
332
A
THR
332
A
ALA
338
A
ALA
338
A
ARG
359
A
ARG
359
A
PRO
362
A
PRO
362
A
VAL
48
A
VAL
48
A
ALA
52
A
ALA
52
A
LYS
71
A
LYS
71
A
SER
74
A
SER
74
A
ILE
97
A
ILE
97
A
ALA
101
A
ALA
101
A
VAL
119
A
VAL
119
A
ALA
121
A
ALA
121
A
ARG
138
A
ARG
138
A
ASN
144
A
ASN
144
A
ILE
166
A
ILE
166
A
TRP
167
A
TRP
167
A
ARG
138
A
ARG
138
A
ASN
144
A
ASN
144
A
GLN
184
A
GLN
184
A
HIS
189
A
HIS
189
A
ALA
221
A
ALA
221
A
SER
223
A
SER
223
A
LYS
264
A
LYS
264
A
ILE
267
A
ILE
267
A
VAL
48
A
VAL
48
A
ALA
52
A
ALA
52
BINDING SITE FOR RESIDUE SO4 A 520
Software
3
BINDING SITE FOR RESIDUE LI A 530
Software
5
BINDING SITE FOR RESIDUE LI A 540
Software
6
BINDING SITE FOR RESIDUE PLP A 554
Software
16
BINDING SITE FOR RESIDUE MES A 510
Software
13
A
MES
510
F
MES
3
1_555
A
HOH
704
G
HOH
3
1_555
A
HOH
784
G
HOH
3
1_555
A
HIS
151
A
HIS
151
5
1_555
A
SER
152
A
SER
152
5
1_555
A
LYS
154
A
LYS
154
5
1_555
A
ASN
156
A
ASN
156
5
1_555
A
HOH
645
G
HOH
5
1_555
A
ASN
303
A
ASN
303
6
1_555
A
SER
384
A
SER
384
6
1_555
A
ARG
389
A
ARG
389
6
1_555
A
PRO
390
A
PRO
390
6
1_555
A
LEU
391
A
LEU
391
6
1_555
A
HOH
590
G
HOH
6
1_555
A
ALA
52
A
ALA
52
16
1_555
A
LYS
54
A
LYS
54
16
1_555
A
THR
100
A
THR
100
16
1_555
A
HIS
191
A
HIS
191
16
1_555
A
GLY
227
A
GLY
227
16
1_555
A
GLU
268
A
GLU
268
16
1_555
A
GLY
270
A
GLY
270
16
1_555
A
ARG
271
A
ARG
271
16
1_555
A
CYS
342
A
CYS
342
16
10_665
A
TYR
378
A
TYR
378
16
1_555
A
MES
510
F
MES
16
1_555
A
HOH
595
G
HOH
16
1_555
A
HOH
602
G
HOH
16
1_555
A
HOH
614
G
HOH
16
1_555
A
HOH
629
G
HOH
16
1_555
A
HOH
631
G
HOH
16
1_555
A
LYS
54
A
LYS
54
13
1_555
A
THR
157
A
THR
157
13
1_555
A
HIS
191
A
HIS
191
13
1_555
A
TYR
311
A
TYR
311
13
1_555
A
GLU
343
A
GLU
343
13
10_665
A
SER
344
A
SER
344
13
10_665
A
TYR
378
A
TYR
378
13
1_555
A
SO4
520
B
SO4
13
1_555
A
PLP
554
E
PLP
13
1_555
A
HOH
609
G
HOH
13
1_555
A
HOH
614
G
HOH
13
1_555
A
HOH
704
G
HOH
13
1_555
A
HOH
864
G
HOH
13
1_555
178
P 61 2 2