0.01014 0.00586 0.00000 0.00000 0.01171 0.00000 0.00000 0.00000 0.00565 0.00000 0.00000 0.00000 Levdikov, V. Blagova, L. Bose, N. Momany, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 98.580 98.580 176.950 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking Li 1 6.941 LITHIUM ION non-polymer C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H13 N O4 S 195.237 2-(N-MORPHOLINO)-ETHANESULFONIC ACID non-polymer C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C8 H10 N O6 P 247.142 PYRIDOXAL-5'-PHOSPHATE VITAMIN B6 Phosphate non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Diaminopimelate Decarboxylase uses a Versatile Active Site for Stereospecific Decarboxylation 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 93 1 IMAGE PLATE MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 46920.816 Diaminopimelate decarboxylase 4.1.1.20 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 6.941 LITHIUM ION 2 syn non-polymer 247.142 PYRIDOXAL-5'-PHOSPHATE 1 syn non-polymer 195.237 2-(N-MORPHOLINO)-ETHANESULFONIC ACID 1 syn non-polymer 18.015 water 393 nat water DAP decarboxylase no no MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISAL AADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNG QARLIRRRQTIEELLALELLHHHHH MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISAL AADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNG QARLIRRRQTIEELLALELLHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia Escherichia coli sample LysA 562 Escherichia coli 469008 Escherichia coli BL21(DE3) BL21(DE3) Plasmid pET28b 1 2.64 53.48 VAPOR DIFFUSION, HANGING DROP 6.0 Lithium sulfate, MES, pyridoxal-5'-phosphate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 repository Initial release Version format compliance Derived calculations Version format compliance 1 0 2003-11-11 1 1 2008-04-27 1 2 2011-07-13 Crystal Structure of a D,L-lysine complex of diaminopimelate decarboxylase RCSB Y RCSB 2001-12-19 REL SO4 SULFATE ION LI LITHIUM ION PLP PYRIDOXAL-5'-PHOSPHATE MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HOH water SUL 20 2 SO4 SO4 520 A LI 30 3 LI LI 530 A LI 40 3 LI LI 540 A PLP 54 4 PLP PLP 554 A MES 10 5 MES MES 510 A WAT 1 6 HOH HOH 555 A WAT 2 6 HOH HOH 556 A WAT 3 6 HOH HOH 557 A WAT 4 6 HOH HOH 558 A WAT 5 6 HOH HOH 559 A WAT 1 6 HOH HOH 560 A WAT 2 6 HOH HOH 561 A WAT 3 6 HOH HOH 562 A WAT 4 6 HOH HOH 563 A WAT 5 6 HOH HOH 564 A WAT 6 6 HOH HOH 565 A WAT 7 6 HOH HOH 566 A WAT 8 6 HOH HOH 567 A WAT 9 6 HOH HOH 568 A WAT 10 6 HOH HOH 569 A WAT 11 6 HOH HOH 570 A WAT 12 6 HOH HOH 571 A WAT 13 6 HOH HOH 572 A WAT 14 6 HOH HOH 573 A WAT 15 6 HOH HOH 574 A WAT 16 6 HOH HOH 575 A WAT 17 6 HOH HOH 576 A WAT 18 6 HOH HOH 577 A WAT 19 6 HOH HOH 578 A WAT 20 6 HOH HOH 579 A WAT 21 6 HOH HOH 580 A WAT 22 6 HOH HOH 581 A WAT 23 6 HOH HOH 582 A WAT 24 6 HOH HOH 583 A WAT 25 6 HOH HOH 584 A WAT 26 6 HOH HOH 585 A WAT 27 6 HOH HOH 586 A WAT 28 6 HOH HOH 587 A WAT 29 6 HOH HOH 588 A WAT 30 6 HOH HOH 589 A WAT 31 6 HOH HOH 590 A WAT 32 6 HOH HOH 591 A WAT 33 6 HOH HOH 592 A WAT 34 6 HOH HOH 593 A WAT 35 6 HOH HOH 594 A WAT 36 6 HOH HOH 595 A WAT 37 6 HOH HOH 596 A WAT 38 6 HOH HOH 597 A WAT 39 6 HOH HOH 598 A WAT 40 6 HOH HOH 599 A WAT 41 6 HOH HOH 600 A WAT 42 6 HOH HOH 601 A WAT 43 6 HOH HOH 602 A WAT 44 6 HOH HOH 603 A WAT 45 6 HOH HOH 604 A WAT 46 6 HOH HOH 605 A WAT 47 6 HOH HOH 606 A WAT 48 6 HOH HOH 607 A WAT 49 6 HOH HOH 608 A WAT 50 6 HOH HOH 609 A WAT 51 6 HOH HOH 610 A WAT 52 6 HOH HOH 611 A WAT 53 6 HOH HOH 612 A WAT 54 6 HOH HOH 613 A WAT 55 6 HOH HOH 614 A WAT 56 6 HOH HOH 615 A WAT 57 6 HOH HOH 616 A WAT 58 6 HOH HOH 617 A WAT 59 6 HOH HOH 618 A WAT 60 6 HOH HOH 619 A WAT 61 6 HOH HOH 620 A WAT 62 6 HOH HOH 621 A WAT 63 6 HOH HOH 622 A WAT 64 6 HOH HOH 623 A WAT 65 6 HOH HOH 624 A WAT 66 6 HOH HOH 625 A WAT 67 6 HOH HOH 626 A WAT 68 6 HOH HOH 627 A WAT 69 6 HOH HOH 628 A WAT 70 6 HOH HOH 629 A WAT 71 6 HOH HOH 630 A WAT 72 6 HOH HOH 631 A WAT 73 6 HOH HOH 632 A WAT 74 6 HOH HOH 633 A WAT 75 6 HOH HOH 634 A WAT 76 6 HOH HOH 635 A WAT 77 6 HOH HOH 636 A WAT 78 6 HOH HOH 637 A WAT 79 6 HOH HOH 638 A WAT 80 6 HOH HOH 639 A WAT 81 6 HOH HOH 640 A WAT 82 6 HOH HOH 641 A WAT 83 6 HOH HOH 642 A WAT 84 6 HOH HOH 643 A WAT 85 6 HOH HOH 644 A WAT 86 6 HOH HOH 645 A WAT 87 6 HOH HOH 646 A WAT 88 6 HOH HOH 647 A WAT 89 6 HOH HOH 648 A WAT 90 6 HOH HOH 649 A WAT 91 6 HOH HOH 650 A WAT 92 6 HOH HOH 651 A WAT 93 6 HOH HOH 652 A WAT 94 6 HOH HOH 653 A WAT 95 6 HOH HOH 654 A WAT 96 6 HOH HOH 655 A WAT 97 6 HOH HOH 656 A WAT 98 6 HOH HOH 657 A WAT 99 6 HOH HOH 658 A WAT 100 6 HOH HOH 659 A WAT 101 6 HOH HOH 660 A WAT 102 6 HOH HOH 661 A WAT 103 6 HOH HOH 662 A WAT 104 6 HOH HOH 663 A WAT 105 6 HOH HOH 664 A WAT 106 6 HOH HOH 665 A WAT 107 6 HOH HOH 666 A WAT 108 6 HOH HOH 667 A WAT 109 6 HOH HOH 668 A WAT 110 6 HOH HOH 669 A WAT 111 6 HOH HOH 670 A WAT 112 6 HOH HOH 671 A WAT 113 6 HOH HOH 672 A WAT 114 6 HOH HOH 673 A WAT 115 6 HOH HOH 674 A WAT 116 6 HOH HOH 675 A WAT 117 6 HOH HOH 676 A WAT 118 6 HOH HOH 677 A WAT 119 6 HOH HOH 678 A WAT 120 6 HOH HOH 679 A WAT 121 6 HOH HOH 680 A WAT 122 6 HOH HOH 681 A WAT 123 6 HOH HOH 682 A WAT 124 6 HOH HOH 683 A WAT 125 6 HOH HOH 684 A WAT 126 6 HOH HOH 685 A WAT 127 6 HOH HOH 686 A WAT 128 6 HOH HOH 687 A WAT 129 6 HOH HOH 688 A WAT 130 6 HOH HOH 689 A WAT 131 6 HOH HOH 690 A WAT 132 6 HOH HOH 691 A WAT 133 6 HOH HOH 692 A WAT 134 6 HOH HOH 693 A WAT 135 6 HOH HOH 694 A WAT 136 6 HOH HOH 695 A WAT 137 6 HOH HOH 696 A WAT 138 6 HOH HOH 697 A WAT 139 6 HOH HOH 698 A WAT 140 6 HOH HOH 699 A WAT 141 6 HOH HOH 700 A WAT 142 6 HOH HOH 701 A WAT 143 6 HOH HOH 702 A WAT 144 6 HOH HOH 703 A WAT 145 6 HOH HOH 704 A WAT 146 6 HOH HOH 705 A WAT 147 6 HOH HOH 706 A WAT 148 6 HOH HOH 707 A WAT 149 6 HOH HOH 708 A WAT 150 6 HOH HOH 709 A WAT 151 6 HOH HOH 710 A WAT 152 6 HOH HOH 711 A WAT 153 6 HOH HOH 712 A WAT 154 6 HOH HOH 713 A WAT 155 6 HOH HOH 714 A WAT 156 6 HOH HOH 715 A WAT 157 6 HOH HOH 716 A WAT 158 6 HOH HOH 717 A WAT 159 6 HOH HOH 718 A WAT 160 6 HOH HOH 719 A WAT 161 6 HOH HOH 720 A WAT 162 6 HOH HOH 721 A WAT 163 6 HOH HOH 722 A WAT 164 6 HOH HOH 723 A WAT 165 6 HOH HOH 724 A WAT 166 6 HOH HOH 725 A WAT 167 6 HOH HOH 726 A WAT 168 6 HOH HOH 727 A WAT 169 6 HOH HOH 728 A WAT 170 6 HOH HOH 729 A WAT 171 6 HOH HOH 730 A WAT 172 6 HOH HOH 731 A WAT 173 6 HOH HOH 732 A WAT 174 6 HOH HOH 733 A WAT 175 6 HOH HOH 734 A WAT 176 6 HOH HOH 735 A WAT 177 6 HOH HOH 736 A WAT 178 6 HOH HOH 737 A WAT 179 6 HOH HOH 738 A WAT 180 6 HOH HOH 739 A WAT 181 6 HOH HOH 740 A WAT 182 6 HOH HOH 741 A WAT 183 6 HOH HOH 742 A WAT 184 6 HOH HOH 743 A WAT 185 6 HOH HOH 744 A WAT 186 6 HOH HOH 745 A WAT 187 6 HOH HOH 746 A WAT 188 6 HOH HOH 747 A WAT 189 6 HOH HOH 748 A WAT 190 6 HOH HOH 749 A WAT 191 6 HOH HOH 750 A WAT 192 6 HOH HOH 751 A WAT 193 6 HOH HOH 752 A WAT 194 6 HOH HOH 753 A WAT 195 6 HOH HOH 754 A WAT 196 6 HOH HOH 755 A WAT 197 6 HOH HOH 756 A WAT 198 6 HOH HOH 757 A WAT 199 6 HOH HOH 758 A WAT 200 6 HOH HOH 759 A WAT 201 6 HOH HOH 760 A WAT 202 6 HOH HOH 761 A WAT 203 6 HOH HOH 762 A WAT 204 6 HOH HOH 763 A WAT 205 6 HOH HOH 764 A WAT 206 6 HOH HOH 765 A WAT 207 6 HOH HOH 766 A WAT 208 6 HOH HOH 767 A WAT 209 6 HOH HOH 768 A WAT 210 6 HOH HOH 769 A WAT 211 6 HOH HOH 770 A WAT 212 6 HOH HOH 771 A WAT 213 6 HOH HOH 772 A WAT 214 6 HOH HOH 773 A WAT 215 6 HOH HOH 774 A WAT 216 6 HOH HOH 775 A WAT 217 6 HOH HOH 776 A WAT 218 6 HOH HOH 777 A WAT 219 6 HOH HOH 778 A WAT 220 6 HOH HOH 779 A WAT 221 6 HOH HOH 780 A WAT 222 6 HOH HOH 781 A WAT 223 6 HOH HOH 782 A WAT 224 6 HOH HOH 783 A WAT 225 6 HOH HOH 784 A WAT 226 6 HOH HOH 785 A WAT 227 6 HOH HOH 786 A WAT 228 6 HOH HOH 787 A WAT 229 6 HOH HOH 788 A WAT 230 6 HOH HOH 789 A WAT 231 6 HOH HOH 790 A WAT 232 6 HOH HOH 791 A WAT 233 6 HOH HOH 792 A WAT 234 6 HOH HOH 793 A WAT 235 6 HOH HOH 794 A WAT 236 6 HOH HOH 795 A WAT 237 6 HOH HOH 796 A WAT 238 6 HOH HOH 797 A WAT 239 6 HOH HOH 798 A WAT 240 6 HOH HOH 799 A WAT 241 6 HOH HOH 800 A WAT 242 6 HOH HOH 801 A WAT 243 6 HOH HOH 802 A WAT 244 6 HOH HOH 803 A WAT 245 6 HOH HOH 804 A WAT 246 6 HOH HOH 805 A WAT 247 6 HOH HOH 806 A WAT 248 6 HOH HOH 807 A WAT 249 6 HOH HOH 808 A WAT 250 6 HOH HOH 809 A WAT 251 6 HOH HOH 810 A WAT 252 6 HOH HOH 811 A WAT 253 6 HOH HOH 812 A WAT 254 6 HOH HOH 813 A WAT 255 6 HOH HOH 814 A WAT 256 6 HOH HOH 815 A WAT 257 6 HOH HOH 816 A WAT 258 6 HOH HOH 817 A WAT 259 6 HOH HOH 818 A WAT 260 6 HOH HOH 819 A WAT 261 6 HOH HOH 820 A WAT 262 6 HOH HOH 821 A WAT 263 6 HOH HOH 822 A WAT 264 6 HOH HOH 823 A WAT 265 6 HOH HOH 824 A WAT 266 6 HOH HOH 825 A WAT 267 6 HOH HOH 826 A WAT 268 6 HOH HOH 827 A WAT 269 6 HOH HOH 828 A WAT 270 6 HOH HOH 829 A WAT 271 6 HOH HOH 830 A WAT 272 6 HOH HOH 831 A WAT 273 6 HOH HOH 832 A WAT 274 6 HOH HOH 833 A WAT 275 6 HOH HOH 834 A WAT 276 6 HOH HOH 835 A WAT 277 6 HOH HOH 836 A WAT 278 6 HOH HOH 837 A WAT 279 6 HOH HOH 838 A WAT 280 6 HOH HOH 839 A WAT 281 6 HOH HOH 840 A WAT 282 6 HOH HOH 841 A WAT 283 6 HOH HOH 842 A WAT 284 6 HOH HOH 843 A WAT 285 6 HOH HOH 844 A WAT 286 6 HOH HOH 845 A WAT 287 6 HOH HOH 846 A WAT 288 6 HOH HOH 847 A WAT 289 6 HOH HOH 848 A WAT 290 6 HOH HOH 849 A WAT 291 6 HOH HOH 850 A WAT 292 6 HOH HOH 851 A WAT 293 6 HOH HOH 852 A WAT 294 6 HOH HOH 853 A WAT 295 6 HOH HOH 854 A WAT 296 6 HOH HOH 855 A WAT 297 6 HOH HOH 856 A WAT 298 6 HOH HOH 857 A WAT 299 6 HOH HOH 858 A WAT 300 6 HOH HOH 859 A WAT 301 6 HOH HOH 860 A WAT 302 6 HOH HOH 861 A WAT 303 6 HOH HOH 862 A WAT 304 6 HOH HOH 863 A WAT 305 6 HOH HOH 864 A WAT 306 6 HOH HOH 865 A WAT 307 6 HOH HOH 866 A WAT 308 6 HOH HOH 867 A WAT 309 6 HOH HOH 868 A WAT 310 6 HOH HOH 869 A WAT 311 6 HOH HOH 870 A WAT 312 6 HOH HOH 871 A WAT 313 6 HOH HOH 872 A WAT 314 6 HOH HOH 873 A WAT 315 6 HOH HOH 874 A WAT 316 6 HOH HOH 875 A WAT 317 6 HOH HOH 876 A WAT 318 6 HOH HOH 877 A WAT 319 6 HOH HOH 878 A WAT 320 6 HOH HOH 879 A WAT 321 6 HOH HOH 880 A WAT 322 6 HOH HOH 881 A WAT 323 6 HOH HOH 882 A WAT 324 6 HOH HOH 883 A WAT 325 6 HOH HOH 884 A WAT 326 6 HOH HOH 885 A WAT 327 6 HOH HOH 886 A WAT 328 6 HOH HOH 887 A WAT 329 6 HOH HOH 888 A WAT 330 6 HOH HOH 889 A WAT 331 6 HOH HOH 890 A WAT 332 6 HOH HOH 891 A WAT 333 6 HOH HOH 892 A WAT 334 6 HOH HOH 893 A WAT 335 6 HOH HOH 894 A WAT 336 6 HOH HOH 895 A WAT 337 6 HOH HOH 896 A WAT 338 6 HOH HOH 897 A WAT 339 6 HOH HOH 898 A WAT 340 6 HOH HOH 899 A WAT 341 6 HOH HOH 900 A WAT 342 6 HOH HOH 901 A WAT 343 6 HOH HOH 902 A WAT 344 6 HOH HOH 903 A WAT 345 6 HOH HOH 904 A WAT 346 6 HOH HOH 905 A WAT 347 6 HOH HOH 906 A WAT 348 6 HOH HOH 907 A WAT 349 6 HOH HOH 908 A WAT 350 6 HOH HOH 909 A WAT 351 6 HOH HOH 910 A WAT 352 6 HOH HOH 911 A WAT 353 6 HOH HOH 912 A WAT 354 6 HOH HOH 913 A WAT 355 6 HOH HOH 914 A WAT 356 6 HOH HOH 915 A WAT 357 6 HOH HOH 916 A WAT 358 6 HOH HOH 917 A WAT 359 6 HOH HOH 918 A WAT 360 6 HOH HOH 919 A WAT 361 6 HOH HOH 920 A WAT 362 6 HOH HOH 921 A WAT 363 6 HOH HOH 922 A WAT 364 6 HOH HOH 923 A WAT 365 6 HOH HOH 924 A WAT 366 6 HOH HOH 925 A WAT 367 6 HOH HOH 926 A WAT 368 6 HOH HOH 927 A WAT 369 6 HOH HOH 928 A WAT 370 6 HOH HOH 929 A WAT 371 6 HOH HOH 930 A WAT 372 6 HOH HOH 931 A WAT 373 6 HOH HOH 932 A WAT 374 6 HOH HOH 933 A WAT 375 6 HOH HOH 934 A WAT 376 6 HOH HOH 935 A WAT 377 6 HOH HOH 936 A WAT 378 6 HOH HOH 937 A WAT 379 6 HOH HOH 938 A WAT 380 6 HOH HOH 939 A WAT 381 6 HOH HOH 940 A WAT 382 6 HOH HOH 941 A WAT 383 6 HOH HOH 942 A WAT 384 6 HOH HOH 943 A WAT 385 6 HOH HOH 944 A WAT 386 6 HOH HOH 945 A WAT 387 6 HOH HOH 946 A WAT 388 6 HOH HOH 947 A n 1 1 A PRO 2 n 2 PRO 2 A HIS 3 n 3 HIS 3 A SER 4 n 4 SER 4 A LEU 5 n 5 LEU 5 A PHE 6 n 6 PHE 6 A SER 7 n 7 SER 7 A THR 8 n 8 THR 8 A ASP 9 n 9 ASP 9 A THR 10 n 10 THR 10 A ASP 11 n 11 ASP 11 A LEU 12 n 12 LEU 12 A THR 13 n 13 THR 13 A ALA 14 n 14 ALA 14 A GLU 15 n 15 GLU 15 A ASN 16 n 16 ASN 16 A LEU 17 n 17 LEU 17 A LEU 18 n 18 LEU 18 A ARG 19 n 19 ARG 19 A LEU 20 n 20 LEU 20 A PRO 21 n 21 PRO 21 A ALA 22 n 22 ALA 22 A GLU 23 n 23 GLU 23 A PHE 24 n 24 PHE 24 A GLY 25 n 25 GLY 25 A CYS 26 n 26 CYS 26 A PRO 27 n 27 PRO 27 A VAL 28 n 28 VAL 28 A TRP 29 n 29 TRP 29 A VAL 30 n 30 VAL 30 A TYR 31 n 31 TYR 31 A ASP 32 n 32 ASP 32 A ALA 33 n 33 ALA 33 A GLN 34 n 34 GLN 34 A ILE 35 n 35 ILE 35 A ILE 36 n 36 ILE 36 A ARG 37 n 37 ARG 37 A ARG 38 n 38 ARG 38 A GLN 39 n 39 GLN 39 A ILE 40 n 40 ILE 40 A ALA 41 n 41 ALA 41 A ALA 42 n 42 ALA 42 A LEU 43 n 43 LEU 43 A LYS 44 n 44 LYS 44 A GLN 45 n 45 GLN 45 A PHE 46 n 46 PHE 46 A ASP 47 n 47 ASP 47 A VAL 48 n 48 VAL 48 A VAL 49 n 49 VAL 49 A ARG 50 n 50 ARG 50 A PHE 51 n 51 PHE 51 A ALA 52 n 52 ALA 52 A GLN 53 n 53 GLN 53 A LYS 54 n 54 LYS 54 A ALA 55 n 55 ALA 55 A CYS 56 n 56 CYS 56 A SER 57 n 57 SER 57 A ASN 58 n 58 ASN 58 A ILE 59 n 59 ILE 59 A HIS 60 n 60 HIS 60 A ILE 61 n 61 ILE 61 A LEU 62 n 62 LEU 62 A ARG 63 n 63 ARG 63 A LEU 64 n 64 LEU 64 A MET 65 n 65 MET 65 A ARG 66 n 66 ARG 66 A GLU 67 n 67 GLU 67 A GLN 68 n 68 GLN 68 A GLY 69 n 69 GLY 69 A VAL 70 n 70 VAL 70 A LYS 71 n 71 LYS 71 A VAL 72 n 72 VAL 72 A ASP 73 n 73 ASP 73 A SER 74 n 74 SER 74 A VAL 75 n 75 VAL 75 A SER 76 n 76 SER 76 A LEU 77 n 77 LEU 77 A GLY 78 n 78 GLY 78 A GLU 79 n 79 GLU 79 A ILE 80 n 80 ILE 80 A GLU 81 n 81 GLU 81 A ARG 82 n 82 ARG 82 A ALA 83 n 83 ALA 83 A LEU 84 n 84 LEU 84 A ALA 85 n 85 ALA 85 A ALA 86 n 86 ALA 86 A GLY 87 n 87 GLY 87 A TYR 88 n 88 TYR 88 A ASN 89 n 89 ASN 89 A PRO 90 n 90 PRO 90 A GLN 91 n 91 GLN 91 A THR 92 n 92 THR 92 A HIS 93 n 93 HIS 93 A PRO 94 n 94 PRO 94 A ASP 95 n 95 ASP 95 A ASP 96 n 96 ASP 96 A ILE 97 n 97 ILE 97 A VAL 98 n 98 VAL 98 A PHE 99 n 99 PHE 99 A THR 100 n 100 THR 100 A ALA 101 n 101 ALA 101 A ASP 102 n 102 ASP 102 A VAL 103 n 103 VAL 103 A ILE 104 n 104 ILE 104 A ASP 105 n 105 ASP 105 A GLN 106 n 106 GLN 106 A ALA 107 n 107 ALA 107 A THR 108 n 108 THR 108 A LEU 109 n 109 LEU 109 A GLU 110 n 110 GLU 110 A ARG 111 n 111 ARG 111 A VAL 112 n 112 VAL 112 A SER 113 n 113 SER 113 A GLU 114 n 114 GLU 114 A LEU 115 n 115 LEU 115 A GLN 116 n 116 GLN 116 A ILE 117 n 117 ILE 117 A PRO 118 n 118 PRO 118 A VAL 119 n 119 VAL 119 A ASN 120 n 120 ASN 120 A ALA 121 n 121 ALA 121 A GLY 122 n 122 GLY 122 A SER 123 n 123 SER 123 A VAL 124 n 124 VAL 124 A ASP 125 n 125 ASP 125 A MET 126 n 126 MET 126 A LEU 127 n 127 LEU 127 A ASP 128 n 128 ASP 128 A GLN 129 n 129 GLN 129 A LEU 130 n 130 LEU 130 A GLY 131 n 131 GLY 131 A GLN 132 n 132 GLN 132 A VAL 133 n 133 VAL 133 A SER 134 n 134 SER 134 A PRO 135 n 135 PRO 135 A GLY 136 n 136 GLY 136 A HIS 137 n 137 HIS 137 A ARG 138 n 138 ARG 138 A VAL 139 n 139 VAL 139 A TRP 140 n 140 TRP 140 A LEU 141 n 141 LEU 141 A ARG 142 n 142 ARG 142 A VAL 143 n 143 VAL 143 A ASN 144 n 144 ASN 144 A PRO 145 n 145 PRO 145 A GLY 146 n 146 GLY 146 A PHE 147 n 147 PHE 147 A GLY 148 n 148 GLY 148 A HIS 149 n 149 HIS 149 A GLY 150 n 150 GLY 150 A HIS 151 n 151 HIS 151 A SER 152 n 152 SER 152 A GLN 153 n 153 GLN 153 A LYS 154 n 154 LYS 154 A THR 155 n 155 THR 155 A ASN 156 n 156 ASN 156 A THR 157 n 157 THR 157 A GLY 158 n 158 GLY 158 A GLY 159 n 159 GLY 159 A GLU 160 n 160 GLU 160 A ASN 161 n 161 ASN 161 A SER 162 n 162 SER 162 A LYS 163 n 163 LYS 163 A HIS 164 n 164 HIS 164 A GLY 165 n 165 GLY 165 A ILE 166 n 166 ILE 166 A TRP 167 n 167 TRP 167 A TYR 168 n 168 TYR 168 A THR 169 n 169 THR 169 A ASP 170 n 170 ASP 170 A LEU 171 n 171 LEU 171 A PRO 172 n 172 PRO 172 A ALA 173 n 173 ALA 173 A ALA 174 n 174 ALA 174 A LEU 175 n 175 LEU 175 A ASP 176 n 176 ASP 176 A VAL 177 n 177 VAL 177 A ILE 178 n 178 ILE 178 A GLN 179 n 179 GLN 179 A ARG 180 n 180 ARG 180 A HIS 181 n 181 HIS 181 A HIS 182 n 182 HIS 182 A LEU 183 n 183 LEU 183 A GLN 184 n 184 GLN 184 A LEU 185 n 185 LEU 185 A VAL 186 n 186 VAL 186 A GLY 187 n 187 GLY 187 A ILE 188 n 188 ILE 188 A HIS 189 n 189 HIS 189 A MET 190 n 190 MET 190 A HIS 191 n 191 HIS 191 A ILE 192 n 192 ILE 192 A GLY 193 n 193 GLY 193 A SER 194 n 194 SER 194 A GLY 195 n 195 GLY 195 A VAL 196 n 196 VAL 196 A ASP 197 n 197 ASP 197 A TYR 198 n 198 TYR 198 A ALA 199 n 199 ALA 199 A HIS 200 n 200 HIS 200 A LEU 201 n 201 LEU 201 A GLU 202 n 202 GLU 202 A GLN 203 n 203 GLN 203 A VAL 204 n 204 VAL 204 A CYS 205 n 205 CYS 205 A GLY 206 n 206 GLY 206 A ALA 207 n 207 ALA 207 A MET 208 n 208 MET 208 A VAL 209 n 209 VAL 209 A ARG 210 n 210 ARG 210 A GLN 211 n 211 GLN 211 A VAL 212 n 212 VAL 212 A ILE 213 n 213 ILE 213 A GLU 214 n 214 GLU 214 A PHE 215 n 215 PHE 215 A GLY 216 n 216 GLY 216 A GLN 217 n 217 GLN 217 A ASP 218 n 218 ASP 218 A LEU 219 n 219 LEU 219 A GLN 220 n 220 GLN 220 A ALA 221 n 221 ALA 221 A ILE 222 n 222 ILE 222 A SER 223 n 223 SER 223 A ALA 224 n 224 ALA 224 A GLY 225 n 225 GLY 225 A GLY 226 n 226 GLY 226 A GLY 227 n 227 GLY 227 A LEU 228 n 228 LEU 228 A SER 229 n 229 SER 229 A VAL 230 n 230 VAL 230 A PRO 231 n 231 PRO 231 A TYR 232 n 232 TYR 232 A GLN 233 n 233 GLN 233 A GLN 234 n 234 GLN 234 A GLY 235 n 235 GLY 235 A GLU 236 n 236 GLU 236 A GLU 237 n 237 GLU 237 A ALA 238 n 238 ALA 238 A VAL 239 n 239 VAL 239 A ASP 240 n 240 ASP 240 A THR 241 n 241 THR 241 A GLU 242 n 242 GLU 242 A HIS 243 n 243 HIS 243 A TYR 244 n 244 TYR 244 A TYR 245 n 245 TYR 245 A GLY 246 n 246 GLY 246 A LEU 247 n 247 LEU 247 A TRP 248 n 248 TRP 248 A ASN 249 n 249 ASN 249 A ALA 250 n 250 ALA 250 A ALA 251 n 251 ALA 251 A ARG 252 n 252 ARG 252 A GLU 253 n 253 GLU 253 A GLN 254 n 254 GLN 254 A ILE 255 n 255 ILE 255 A ALA 256 n 256 ALA 256 A ARG 257 n 257 ARG 257 A HIS 258 n 258 HIS 258 A LEU 259 n 259 LEU 259 A GLY 260 n 260 GLY 260 A HIS 261 n 261 HIS 261 A PRO 262 n 262 PRO 262 A VAL 263 n 263 VAL 263 A LYS 264 n 264 LYS 264 A LEU 265 n 265 LEU 265 A GLU 266 n 266 GLU 266 A ILE 267 n 267 ILE 267 A GLU 268 n 268 GLU 268 A PRO 269 n 269 PRO 269 A GLY 270 n 270 GLY 270 A ARG 271 n 271 ARG 271 A PHE 272 n 272 PHE 272 A LEU 273 n 273 LEU 273 A VAL 274 n 274 VAL 274 A ALA 275 n 275 ALA 275 A GLN 276 n 276 GLN 276 A SER 277 n 277 SER 277 A GLY 278 n 278 GLY 278 A VAL 279 n 279 VAL 279 A LEU 280 n 280 LEU 280 A ILE 281 n 281 ILE 281 A THR 282 n 282 THR 282 A GLN 283 n 283 GLN 283 A VAL 284 n 284 VAL 284 A ARG 285 n 285 ARG 285 A SER 286 n 286 SER 286 A VAL 287 n 287 VAL 287 A LYS 288 n 288 LYS 288 A GLN 289 n 289 GLN 289 A MET 290 n 290 MET 290 A GLY 291 n 291 GLY 291 A SER 292 n 292 SER 292 A ARG 293 n 293 ARG 293 A HIS 294 n 294 HIS 294 A PHE 295 n 295 PHE 295 A VAL 296 n 296 VAL 296 A LEU 297 n 297 LEU 297 A VAL 298 n 298 VAL 298 A ASP 299 n 299 ASP 299 A ALA 300 n 300 ALA 300 A GLY 301 n 301 GLY 301 A PHE 302 n 302 PHE 302 A ASN 303 n 303 ASN 303 A ASP 304 n 304 ASP 304 A LEU 305 n 305 LEU 305 A MET 306 n 306 MET 306 A ARG 307 n 307 ARG 307 A PRO 308 n 308 PRO 308 A ALA 309 n 309 ALA 309 A MET 310 n 310 MET 310 A TYR 311 n 311 TYR 311 A GLY 312 n 312 GLY 312 A SER 313 n 313 SER 313 A TYR 314 n 314 TYR 314 A HIS 315 n 315 HIS 315 A HIS 316 n 316 HIS 316 A ILE 317 n 317 ILE 317 A SER 318 n 318 SER 318 A ALA 319 n 319 ALA 319 A LEU 320 n 320 LEU 320 A ALA 321 n 321 ALA 321 A ALA 322 n 322 ALA 322 A ASP 323 n 323 ASP 323 A GLY 324 n 324 GLY 324 A ARG 325 n 325 ARG 325 A SER 326 n 326 SER 326 A LEU 327 n 327 LEU 327 A GLU 328 n 328 GLU 328 A HIS 329 n 329 HIS 329 A ALA 330 n 330 ALA 330 A PRO 331 n 331 PRO 331 A THR 332 n 332 THR 332 A VAL 333 n 333 VAL 333 A GLU 334 n 334 GLU 334 A THR 335 n 335 THR 335 A VAL 336 n 336 VAL 336 A VAL 337 n 337 VAL 337 A ALA 338 n 338 ALA 338 A GLY 339 n 339 GLY 339 A PRO 340 n 340 PRO 340 A LEU 341 n 341 LEU 341 A CYS 342 n 342 CYS 342 A GLU 343 n 343 GLU 343 A SER 344 n 344 SER 344 A GLY 345 n 345 GLY 345 A ASP 346 n 346 ASP 346 A VAL 347 n 347 VAL 347 A PHE 348 n 348 PHE 348 A THR 349 n 349 THR 349 A GLN 350 n 350 GLN 350 A GLN 351 n 351 GLN 351 A GLU 352 n 352 GLU 352 A GLY 353 n 353 GLY 353 A GLY 354 n 354 GLY 354 A ASN 355 n 355 ASN 355 A VAL 356 n 356 VAL 356 A GLU 357 n 357 GLU 357 A THR 358 n 358 THR 358 A ARG 359 n 359 ARG 359 A ALA 360 n 360 ALA 360 A LEU 361 n 361 LEU 361 A PRO 362 n 362 PRO 362 A GLU 363 n 363 GLU 363 A VAL 364 n 364 VAL 364 A LYS 365 n 365 LYS 365 A ALA 366 n 366 ALA 366 A GLY 367 n 367 GLY 367 A ASP 368 n 368 ASP 368 A TYR 369 n 369 TYR 369 A LEU 370 n 370 LEU 370 A VAL 371 n 371 VAL 371 A LEU 372 n 372 LEU 372 A HIS 373 n 373 HIS 373 A ASP 374 n 374 ASP 374 A THR 375 n 375 THR 375 A GLY 376 n 376 GLY 376 A ALA 377 n 377 ALA 377 A TYR 378 n 378 TYR 378 A GLY 379 n 379 GLY 379 A ALA 380 n 380 ALA 380 A SER 381 n 381 SER 381 A MET 382 n 382 MET 382 A SER 383 n 383 SER 383 A SER 384 n 384 SER 384 A ASN 385 n 385 ASN 385 A TYR 386 n 386 TYR 386 A ASN 387 n 387 ASN 387 A SER 388 n 388 SER 388 A ARG 389 n 389 ARG 389 A PRO 390 n 390 PRO 390 A LEU 391 n 391 LEU 391 A LEU 392 n 392 LEU 392 A PRO 393 n 393 PRO 393 A GLU 394 n 394 GLU 394 A VAL 395 n 395 VAL 395 A LEU 396 n 396 LEU 396 A PHE 397 n 397 PHE 397 A ASP 398 n 398 ASP 398 A ASN 399 n 399 ASN 399 A GLY 400 n 400 GLY 400 A GLN 401 n 401 GLN 401 A ALA 402 n 402 ALA 402 A ARG 403 n 403 ARG 403 A LEU 404 n 404 LEU 404 A ILE 405 n 405 ILE 405 A ARG 406 n 406 ARG 406 A ARG 407 n 407 ARG 407 A ARG 408 n 408 ARG 408 A GLN 409 n 409 GLN 409 A THR 410 n 410 THR 410 A ILE 411 n 411 ILE 411 A GLU 412 n 412 GLU 412 A GLU 413 n 413 GLU 413 A LEU 414 n 414 LEU 414 A LEU 415 n 415 LEU 415 A ALA 416 n 416 ALA 416 A LEU 417 n 417 LEU 417 A GLU 418 n 418 GLU 418 A LEU 419 n 419 LEU 419 A LEU 420 n 420 LEU 420 A HIS 421 n 421 HIS 421 A HIS 422 n 422 HIS 422 A n 423 423 A n 424 424 A n 425 425 A author_and_software_defined_assembly PISA,PQS 2 dimeric 10710 -61 28560 A HOH 645 G O HOH 1_555 A LI 530 C LI LI 1_555 A LYS 154 A O LYS 154 1_555 117.4 A HOH 645 G O HOH 1_555 A LI 530 C LI LI 1_555 A HIS 151 A O HIS 151 1_555 154.1 A LYS 154 A O LYS 154 1_555 A LI 530 C LI LI 1_555 A HIS 151 A O HIS 151 1_555 88.5 A HOH 645 G O HOH 1_555 A LI 530 C LI LI 1_555 A SER 152 A O SER 152 1_555 89.4 A LYS 154 A O LYS 154 1_555 A LI 530 C LI LI 1_555 A SER 152 A O SER 152 1_555 105.2 A HIS 151 A O HIS 151 1_555 A LI 530 C LI LI 1_555 A SER 152 A O SER 152 1_555 82.5 A HOH 645 G O HOH 1_555 A LI 530 C LI LI 1_555 A ASN 156 A OD1 ASN 156 1_555 87.6 A LYS 154 A O LYS 154 1_555 A LI 530 C LI LI 1_555 A ASN 156 A OD1 ASN 156 1_555 107.7 A HIS 151 A O HIS 151 1_555 A LI 530 C LI LI 1_555 A ASN 156 A OD1 ASN 156 1_555 84.9 A SER 152 A O SER 152 1_555 A LI 530 C LI LI 1_555 A ASN 156 A OD1 ASN 156 1_555 144.3 A SER 384 A O SER 384 1_555 A LI 540 D LI LI 1_555 A HOH 590 G O HOH 1_555 115.0 A SER 384 A O SER 384 1_555 A LI 540 D LI LI 1_555 A ASN 303 A ND2 ASN 303 1_555 69.2 A HOH 590 G O HOH 1_555 A LI 540 D LI LI 1_555 A ASN 303 A ND2 ASN 303 1_555 86.3 A SER 384 A O SER 384 1_555 A LI 540 D LI LI 1_555 A PRO 390 A O PRO 390 1_555 161.9 A HOH 590 G O HOH 1_555 A LI 540 D LI LI 1_555 A PRO 390 A O PRO 390 1_555 80.3 A ASN 303 A ND2 ASN 303 1_555 A LI 540 D LI LI 1_555 A PRO 390 A O PRO 390 1_555 104.0 A SER 384 A O SER 384 1_555 A LI 540 D LI LI 1_555 A ARG 389 A O ARG 389 1_555 89.6 A HOH 590 G O HOH 1_555 A LI 540 D LI LI 1_555 A ARG 389 A O ARG 389 1_555 150.3 A ASN 303 A ND2 ASN 303 1_555 A LI 540 D LI LI 1_555 A ARG 389 A O ARG 389 1_555 87.5 A PRO 390 A O PRO 390 1_555 A LI 540 D LI LI 1_555 A ARG 389 A O ARG 389 1_555 73.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_665 -y+1,-x+1,-z+5/6 crystal symmetry operation 49.2900000000 85.3727843051 147.4583333333 A N ILE 405 A N ILE 405 A O GLU 394 A O GLU 394 A N VAL 395 A N VAL 395 A O TRP 29 A O TRP 29 A O VAL 30 A O VAL 30 A N VAL 279 A N VAL 279 A O THR 282 A O THR 282 A N LEU 370 A N LEU 370 A N VAL 371 A N VAL 371 A O SER 318 A O SER 318 A N LEU 320 A N LEU 320 A O TYR 369 A O TYR 369 A N LEU 372 A N LEU 372 A O LEU 280 A O LEU 280 A N MET 290 A N MET 290 A O ARG 293 A O ARG 293 A O HIS 294 A O HIS 294 A N VAL 336 A N VAL 336 A N THR 335 A N THR 335 A O ARG 359 A O ARG 359 A N PHE 51 A N PHE 51 A O LYS 71 A O LYS 71 A N SER 74 A N SER 74 A O VAL 98 A O VAL 98 A O PHE 99 A O PHE 99 A N ASN 120 A N ASN 120 A N VAL 119 A N VAL 119 A O ARG 138 A O ARG 138 A O ARG 142 A O ARG 142 A N ILE 166 A N ILE 166 A N ILE 166 A N ILE 166 A O ARG 142 A O ARG 142 A N VAL 139 A N VAL 139 A O GLN 184 A O GLN 184 A O VAL 186 A O VAL 186 A N ALA 221 A N ALA 221 A N ILE 222 A N ILE 222 A O LYS 264 A O LYS 264 A N ILE 267 A N ILE 267 A O VAL 48 A O VAL 48 1 A MET 1 A MET 1 1 Y 1 A HIS 423 A HIS 423 1 Y 1 A HIS 424 A HIS 424 1 Y 1 A HIS 425 A HIS 425 1 Y 1 A LEU 392 -10.53 1 A HIS 421 11.11 1 A CYS 56 -175.44 101.89 1 A ASN 161 -99.42 34.62 1 A ILE 192 -122.52 -52.52 1 A GLN 234 -36.55 125.07 1 A THR 349 -100.26 78.56 1 A HIS 421 -174.21 57.83 20.7 0.22 0.173 2.10 10 1495 29454 29454 98 Random 1 0 MIR 2.10 10 393 3691 34 0 3264 0.012 0.010 0.015 0.252 0.179 2.186 146 2775 20.7 2.1 20.0 1KNW 29807 -3 0.068 0.068 1 27.8 10.2 98.0 0.206 2.10 2.17 4.1 0.206 1 4 73.1 data reduction DENZO data scaling SCALEPACK phasing MLPHARE refinement REFMAC Diaminopimelate decarboxylase (E.C.4.1.1.20) Crystal structure of diaminopimelate decarboxylase 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 6 N N The active biological entity is a homodimer. The second monomer is generated from the asymmetryic unit by the operation: -Y,-X,5/6-Z A THR 13 A THR 13 HELX_P A GLY 25 A GLY 25 1 1 13 A ALA 33 A ALA 33 HELX_P A ALA 42 A ALA 42 1 2 10 A LYS 54 A LYS 54 HELX_P A CYS 56 A CYS 56 5 3 3 A ASN 58 A ASN 58 HELX_P A GLN 68 A GLN 68 1 4 11 A SER 76 A SER 76 HELX_P A ALA 86 A ALA 86 1 5 11 A ASP 105 A ASP 105 HELX_P A GLN 116 A GLN 116 1 6 12 A SER 123 A SER 123 HELX_P A SER 134 A SER 134 1 7 12 A ASP 170 A ASP 170 HELX_P A HIS 181 A HIS 181 1 8 12 A ASP 197 A ASP 197 HELX_P A GLY 216 A GLY 216 1 9 20 A ASP 240 A ASP 240 HELX_P A GLY 260 A GLY 260 1 10 21 A GLY 270 A GLY 270 HELX_P A ALA 275 A ALA 275 1 11 6 A MET 306 A MET 306 HELX_P A GLY 312 A GLY 312 1 12 7 A GLY 379 A GLY 379 HELX_P A SER 383 A SER 383 5 13 5 A THR 410 A THR 410 HELX_P A ALA 416 A ALA 416 1 14 7 covale 1.307 A LYS 54 A NZ LYS 54 1_555 A PLP 554 E C4A PLP 1_555 metalc 2.742 A LI 530 C LI LI 1_555 A HOH 645 G O HOH 1_555 metalc 2.749 A LI 530 C LI LI 1_555 A LYS 154 A O LYS 154 1_555 metalc 2.928 A LI 530 C LI LI 1_555 A HIS 151 A O HIS 151 1_555 metalc 2.910 A LI 530 C LI LI 1_555 A SER 152 A O SER 152 1_555 metalc 2.762 A LI 530 C LI LI 1_555 A ASN 156 A OD1 ASN 156 1_555 metalc 2.655 A LI 540 D LI LI 1_555 A SER 384 A O SER 384 1_555 metalc 2.715 A LI 540 D LI LI 1_555 A HOH 590 G O HOH 1_555 metalc 3.132 A LI 540 D LI LI 1_555 A ASN 303 A ND2 ASN 303 1_555 metalc 3.063 A LI 540 D LI LI 1_555 A PRO 390 A O PRO 390 1_555 metalc 2.962 A LI 540 D LI LI 1_555 A ARG 389 A O ARG 389 1_555 LYASE pyridoxal-phosphate, decarboxylation, diaminopimelate, lysine, TIM-barrel, LYASE A CYS 26 A CYS 26 1 A PRO 27 A PRO 27 2.48 DCDA_ECOLI UNP 1 1 P00861 MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISAL AADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNG QARLIRRRQTIEELLALELL 1 420 1KNW 1 420 P00861 A 1 1 420 1 EXPRESSION TAG HIS 421 1KNW A P00861 UNP 421 1 EXPRESSION TAG HIS 422 1KNW A P00861 UNP 422 1 EXPRESSION TAG HIS 423 1KNW A P00861 UNP 423 1 EXPRESSION TAG HIS 424 1KNW A P00861 UNP 424 1 EXPRESSION TAG HIS 425 1KNW A P00861 UNP 425 11 11 anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A GLN 401 A GLN 401 A ARG 406 A ARG 406 A GLU 394 A GLU 394 A ASP 398 A ASP 398 A VAL 28 A VAL 28 A ASP 32 A ASP 32 A GLY 278 A GLY 278 A MET 290 A MET 290 A TYR 369 A TYR 369 A LEU 372 A LEU 372 A ILE 317 A ILE 317 A LEU 320 A LEU 320 A TYR 369 A TYR 369 A LEU 372 A LEU 372 A GLY 278 A GLY 278 A MET 290 A MET 290 A ARG 293 A ARG 293 A VAL 298 A VAL 298 A THR 332 A THR 332 A ALA 338 A ALA 338 A ARG 359 A ARG 359 A PRO 362 A PRO 362 A VAL 48 A VAL 48 A ALA 52 A ALA 52 A LYS 71 A LYS 71 A SER 74 A SER 74 A ILE 97 A ILE 97 A ALA 101 A ALA 101 A VAL 119 A VAL 119 A ALA 121 A ALA 121 A ARG 138 A ARG 138 A ASN 144 A ASN 144 A ILE 166 A ILE 166 A TRP 167 A TRP 167 A ARG 138 A ARG 138 A ASN 144 A ASN 144 A GLN 184 A GLN 184 A HIS 189 A HIS 189 A ALA 221 A ALA 221 A SER 223 A SER 223 A LYS 264 A LYS 264 A ILE 267 A ILE 267 A VAL 48 A VAL 48 A ALA 52 A ALA 52 BINDING SITE FOR RESIDUE SO4 A 520 Software 3 BINDING SITE FOR RESIDUE LI A 530 Software 5 BINDING SITE FOR RESIDUE LI A 540 Software 6 BINDING SITE FOR RESIDUE PLP A 554 Software 16 BINDING SITE FOR RESIDUE MES A 510 Software 13 A MES 510 F MES 3 1_555 A HOH 704 G HOH 3 1_555 A HOH 784 G HOH 3 1_555 A HIS 151 A HIS 151 5 1_555 A SER 152 A SER 152 5 1_555 A LYS 154 A LYS 154 5 1_555 A ASN 156 A ASN 156 5 1_555 A HOH 645 G HOH 5 1_555 A ASN 303 A ASN 303 6 1_555 A SER 384 A SER 384 6 1_555 A ARG 389 A ARG 389 6 1_555 A PRO 390 A PRO 390 6 1_555 A LEU 391 A LEU 391 6 1_555 A HOH 590 G HOH 6 1_555 A ALA 52 A ALA 52 16 1_555 A LYS 54 A LYS 54 16 1_555 A THR 100 A THR 100 16 1_555 A HIS 191 A HIS 191 16 1_555 A GLY 227 A GLY 227 16 1_555 A GLU 268 A GLU 268 16 1_555 A GLY 270 A GLY 270 16 1_555 A ARG 271 A ARG 271 16 1_555 A CYS 342 A CYS 342 16 10_665 A TYR 378 A TYR 378 16 1_555 A MES 510 F MES 16 1_555 A HOH 595 G HOH 16 1_555 A HOH 602 G HOH 16 1_555 A HOH 614 G HOH 16 1_555 A HOH 629 G HOH 16 1_555 A HOH 631 G HOH 16 1_555 A LYS 54 A LYS 54 13 1_555 A THR 157 A THR 157 13 1_555 A HIS 191 A HIS 191 13 1_555 A TYR 311 A TYR 311 13 1_555 A GLU 343 A GLU 343 13 10_665 A SER 344 A SER 344 13 10_665 A TYR 378 A TYR 378 13 1_555 A SO4 520 B SO4 13 1_555 A PLP 554 E PLP 13 1_555 A HOH 609 G HOH 13 1_555 A HOH 614 G HOH 13 1_555 A HOH 704 G HOH 13 1_555 A HOH 864 G HOH 13 1_555 178 P 61 2 2