0.022326
0.000000
0.007990
0.000000
0.011221
0.000000
0.000000
0.000000
0.020599
0.00000
0.00000
0.00000
Kraft, L.
Sprenger, G.A.
Lindqvist, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
109.69
90.00
44.790
89.120
51.560
C6 H13 O10 P
276.135
6-PHOSPHOGLUCONIC ACID
D-saccharide
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
R
C
N
3
S
C
N
4
R
C
N
5
R
C
N
6
N
C
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
O
N
11
N
O
N
12
N
O
N
13
N
O
N
14
N
P
N
15
N
O
N
16
N
O
N
17
N
O
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
O
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
N
N
45
S
C
N
46
N
C
N
47
N
O
N
48
N
C
N
49
N
C
N
50
N
C
N
51
N
N
N
52
N
C
N
53
N
N
N
54
N
N
N
55
N
O
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
O
N
78
N
N
N
79
N
O
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
R
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
S
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
N
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
Y
172
N
C
Y
173
N
N
Y
174
N
C
Y
175
N
C
Y
176
N
N
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
S
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
N
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
S
N
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
MG
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
O
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
R
C
N
340
N
O
N
341
N
C
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
N
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
N
408
N
C
N
409
N
C
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
1
N
sing
N
2
N
doub
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
doub
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
doub
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
doub
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
Y
169
N
sing
Y
170
N
doub
Y
171
N
doub
N
172
N
sing
Y
173
N
sing
N
174
N
sing
Y
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
doub
N
282
N
sing
Y
283
N
doub
N
284
N
sing
Y
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
Y
374
N
doub
Y
375
N
sing
Y
376
N
sing
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
318
1057
1069
10.1016/S0022-2836(02)00215-2
12054802
Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
2002
10.2210/pdb1ko8/pdb
pdb_00001ko8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-06-20
BRUKER SMART 1000
SINGLE WAVELENGTH
M
x-ray
1
1.093
1.0
I711
MAX II
1.093
SYNCHROTRON
MAX II BEAMLINE I711
19572.295
Gluconate kinase
2.7.1.12
2
man
polymer
276.135
6-PHOSPHOGLUCONIC ACID
2
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
18.015
water
34
nat
water
Thermoresistant gluconokinase
no
no
MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTN
KVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
EGVVASTIEVIKKGK
MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTN
KVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
EGVVASTIEVIKKGK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
gntk
562
Escherichia coli
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pJF119EH
1
2.47
50.29
VAPOR DIFFUSION, HANGING DROP
7.2
PEG6000, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
diffrn_source
pdbx_unobs_or_zero_occ_atoms
refine
reflns
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
refine_hist
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Advisory
Data collection
Refinement description
Advisory
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-05-29
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-05-16
1
4
2024-03-13
_diffrn_source.pdbx_synchrotron_site
_refine.ls_d_res_low
_reflns.d_resolution_low
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_refine_hist.d_res_low
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1KNQ contains the same protein, space group P212121.
1KO1 contains the same protein, space group C2.
1KO4 contains the same protein, space group P21212.
1KO5 contains the same protein complexed with ATP.
1KOF contains the same protein complexed with AMPPCP.
RCSB
Y
PDBJ
2001-12-20
REL
REL
6PG
6-PHOSPHOGLUCONIC ACID
MG
MAGNESIUM ION
HOH
water
6PG
502
2
6PG
6PG
502
A
MG
201
3
MG
MG
201
A
6PG
503
2
6PG
6PG
503
B
HOH
1
4
HOH
HOH
503
A
HOH
2
4
HOH
HOH
504
A
HOH
3
4
HOH
HOH
505
A
HOH
6
4
HOH
HOH
506
A
HOH
7
4
HOH
HOH
507
A
HOH
8
4
HOH
HOH
508
A
HOH
9
4
HOH
HOH
509
A
HOH
12
4
HOH
HOH
510
A
HOH
15
4
HOH
HOH
511
A
HOH
16
4
HOH
HOH
512
A
HOH
17
4
HOH
HOH
513
A
HOH
18
4
HOH
HOH
514
A
HOH
19
4
HOH
HOH
515
A
HOH
20
4
HOH
HOH
516
A
HOH
24
4
HOH
HOH
517
A
HOH
30
4
HOH
HOH
518
A
HOH
31
4
HOH
HOH
519
A
HOH
32
4
HOH
HOH
520
A
HOH
34
4
HOH
HOH
521
A
HOH
4
4
HOH
HOH
504
B
HOH
5
4
HOH
HOH
505
B
HOH
10
4
HOH
HOH
506
B
HOH
11
4
HOH
HOH
507
B
HOH
13
4
HOH
HOH
508
B
HOH
14
4
HOH
HOH
509
B
HOH
21
4
HOH
HOH
510
B
HOH
22
4
HOH
HOH
511
B
HOH
23
4
HOH
HOH
512
B
HOH
25
4
HOH
HOH
513
B
HOH
26
4
HOH
HOH
514
B
HOH
27
4
HOH
HOH
515
B
HOH
28
4
HOH
HOH
516
B
HOH
29
4
HOH
HOH
517
B
HOH
33
4
HOH
HOH
518
B
n
1
1
A
n
2
2
A
THR
3
n
3
THR
3
A
THR
4
n
4
THR
4
A
ASN
5
n
5
ASN
5
A
HIS
6
n
6
HIS
6
A
ASP
7
n
7
ASP
7
A
HIS
8
n
8
HIS
8
A
HIS
9
n
9
HIS
9
A
ILE
10
n
10
ILE
10
A
TYR
11
n
11
TYR
11
A
VAL
12
n
12
VAL
12
A
LEU
13
n
13
LEU
13
A
MET
14
n
14
MET
14
A
GLY
15
n
15
GLY
15
A
VAL
16
n
16
VAL
16
A
SER
17
n
17
SER
17
A
GLY
18
n
18
GLY
18
A
SER
19
n
19
SER
19
A
GLY
20
n
20
GLY
20
A
LYS
21
n
21
LYS
21
A
SER
22
n
22
SER
22
A
ALA
23
n
23
ALA
23
A
VAL
24
n
24
VAL
24
A
ALA
25
n
25
ALA
25
A
SER
26
n
26
SER
26
A
GLU
27
n
27
GLU
27
A
VAL
28
n
28
VAL
28
A
ALA
29
n
29
ALA
29
A
HIS
30
n
30
HIS
30
A
GLN
31
n
31
GLN
31
A
LEU
32
n
32
LEU
32
A
HIS
33
n
33
HIS
33
A
ALA
34
n
34
ALA
34
A
ALA
35
n
35
ALA
35
A
PHE
36
n
36
PHE
36
A
LEU
37
n
37
LEU
37
A
ASP
38
n
38
ASP
38
A
GLY
39
n
39
GLY
39
A
ASP
40
n
40
ASP
40
A
PHE
41
n
41
PHE
41
A
LEU
42
n
42
LEU
42
A
HIS
43
n
43
HIS
43
A
PRO
44
n
44
PRO
44
A
ARG
45
n
45
ARG
45
A
ARG
46
n
46
ARG
46
A
ASN
47
n
47
ASN
47
A
ILE
48
n
48
ILE
48
A
GLU
49
n
49
GLU
49
A
LYS
50
n
50
LYS
50
A
MET
51
n
51
MET
51
A
ALA
52
n
52
ALA
52
A
SER
53
n
53
SER
53
A
GLY
54
n
54
GLY
54
A
GLU
55
n
55
GLU
55
A
PRO
56
n
56
PRO
56
A
LEU
57
n
57
LEU
57
A
ASN
58
n
58
ASN
58
A
ASP
59
n
59
ASP
59
A
ASP
60
n
60
ASP
60
A
ASP
61
n
61
ASP
61
A
ARG
62
n
62
ARG
62
A
LYS
63
n
63
LYS
63
A
PRO
64
n
64
PRO
64
A
TRP
65
n
65
TRP
65
A
LEU
66
n
66
LEU
66
A
GLN
67
n
67
GLN
67
A
ALA
68
n
68
ALA
68
A
LEU
69
n
69
LEU
69
A
ASN
70
n
70
ASN
70
A
ASP
71
n
71
ASP
71
A
ALA
72
n
72
ALA
72
A
ALA
73
n
73
ALA
73
A
PHE
74
n
74
PHE
74
A
ALA
75
n
75
ALA
75
A
MET
76
n
76
MET
76
A
GLN
77
n
77
GLN
77
A
ARG
78
n
78
ARG
78
A
THR
79
n
79
THR
79
A
ASN
80
n
80
ASN
80
A
LYS
81
n
81
LYS
81
A
VAL
82
n
82
VAL
82
A
SER
83
n
83
SER
83
A
LEU
84
n
84
LEU
84
A
ILE
85
n
85
ILE
85
A
VAL
86
n
86
VAL
86
A
CYS
87
n
87
CYS
87
A
SER
88
n
88
SER
88
A
ALA
89
n
89
ALA
89
A
LEU
90
n
90
LEU
90
A
LYS
91
n
91
LYS
91
A
LYS
92
n
92
LYS
92
A
HIS
93
n
93
HIS
93
A
TYR
94
n
94
TYR
94
A
ARG
95
n
95
ARG
95
A
ASP
96
n
96
ASP
96
A
LEU
97
n
97
LEU
97
A
LEU
98
n
98
LEU
98
A
ARG
99
n
99
ARG
99
A
GLU
100
n
100
GLU
100
A
GLY
101
n
101
GLY
101
A
ASN
102
n
102
ASN
102
A
PRO
103
n
103
PRO
103
A
ASN
104
n
104
ASN
104
A
LEU
105
n
105
LEU
105
A
SER
106
n
106
SER
106
A
PHE
107
n
107
PHE
107
A
ILE
108
n
108
ILE
108
A
TYR
109
n
109
TYR
109
A
LEU
110
n
110
LEU
110
A
LYS
111
n
111
LYS
111
A
GLY
112
n
112
GLY
112
A
ASP
113
n
113
ASP
113
A
PHE
114
n
114
PHE
114
A
ASP
115
n
115
ASP
115
A
VAL
116
n
116
VAL
116
A
ILE
117
n
117
ILE
117
A
GLU
118
n
118
GLU
118
A
SER
119
n
119
SER
119
A
ARG
120
n
120
ARG
120
A
LEU
121
n
121
LEU
121
A
LYS
122
n
122
LYS
122
A
ALA
123
n
123
ALA
123
A
ARG
124
n
124
ARG
124
A
LYS
125
n
125
LYS
125
A
GLY
126
n
126
GLY
126
A
HIS
127
n
127
HIS
127
A
PHE
128
n
128
PHE
128
A
PHE
129
n
129
PHE
129
A
LYS
130
n
130
LYS
130
A
THR
131
n
131
THR
131
A
GLN
132
n
132
GLN
132
A
MET
133
n
133
MET
133
A
LEU
134
n
134
LEU
134
A
VAL
135
n
135
VAL
135
A
THR
136
n
136
THR
136
A
GLN
137
n
137
GLN
137
A
PHE
138
n
138
PHE
138
A
GLU
139
n
139
GLU
139
A
THR
140
n
140
THR
140
A
LEU
141
n
141
LEU
141
A
GLN
142
n
142
GLN
142
A
GLU
143
n
143
GLU
143
A
PRO
144
n
144
PRO
144
A
GLY
145
n
145
GLY
145
A
ALA
146
n
146
ALA
146
A
ASP
147
n
147
ASP
147
A
GLU
148
n
148
GLU
148
A
THR
149
n
149
THR
149
A
ASP
150
n
150
ASP
150
A
VAL
151
n
151
VAL
151
A
LEU
152
n
152
LEU
152
A
VAL
153
n
153
VAL
153
A
VAL
154
n
154
VAL
154
A
ASP
155
n
155
ASP
155
A
ILE
156
n
156
ILE
156
A
ASP
157
n
157
ASP
157
A
GLN
158
n
158
GLN
158
A
PRO
159
n
159
PRO
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
VAL
163
n
163
VAL
163
A
VAL
164
n
164
VAL
164
A
ALA
165
n
165
ALA
165
A
SER
166
n
166
SER
166
A
THR
167
n
167
THR
167
A
ILE
168
n
168
ILE
168
A
GLU
169
n
169
GLU
169
A
VAL
170
n
170
VAL
170
A
ILE
171
n
171
ILE
171
A
LYS
172
n
172
LYS
172
A
LYS
173
n
173
LYS
173
A
GLY
174
n
174
GLY
174
A
n
175
175
A
n
1
1
B
n
2
2
B
THR
3
n
3
THR
3
B
THR
4
n
4
THR
4
B
ASN
5
n
5
ASN
5
B
HIS
6
n
6
HIS
6
B
ASP
7
n
7
ASP
7
B
HIS
8
n
8
HIS
8
B
HIS
9
n
9
HIS
9
B
ILE
10
n
10
ILE
10
B
TYR
11
n
11
TYR
11
B
VAL
12
n
12
VAL
12
B
LEU
13
n
13
LEU
13
B
MET
14
n
14
MET
14
B
GLY
15
n
15
GLY
15
B
VAL
16
n
16
VAL
16
B
SER
17
n
17
SER
17
B
GLY
18
n
18
GLY
18
B
SER
19
n
19
SER
19
B
GLY
20
n
20
GLY
20
B
LYS
21
n
21
LYS
21
B
SER
22
n
22
SER
22
B
ALA
23
n
23
ALA
23
B
VAL
24
n
24
VAL
24
B
ALA
25
n
25
ALA
25
B
SER
26
n
26
SER
26
B
GLU
27
n
27
GLU
27
B
VAL
28
n
28
VAL
28
B
ALA
29
n
29
ALA
29
B
HIS
30
n
30
HIS
30
B
GLN
31
n
31
GLN
31
B
LEU
32
n
32
LEU
32
B
HIS
33
n
33
HIS
33
B
ALA
34
n
34
ALA
34
B
ALA
35
n
35
ALA
35
B
PHE
36
n
36
PHE
36
B
LEU
37
n
37
LEU
37
B
ASP
38
n
38
ASP
38
B
GLY
39
n
39
GLY
39
B
ASP
40
n
40
ASP
40
B
PHE
41
n
41
PHE
41
B
LEU
42
n
42
LEU
42
B
HIS
43
n
43
HIS
43
B
PRO
44
n
44
PRO
44
B
ARG
45
n
45
ARG
45
B
ARG
46
n
46
ARG
46
B
ASN
47
n
47
ASN
47
B
ILE
48
n
48
ILE
48
B
GLU
49
n
49
GLU
49
B
LYS
50
n
50
LYS
50
B
MET
51
n
51
MET
51
B
ALA
52
n
52
ALA
52
B
SER
53
n
53
SER
53
B
GLY
54
n
54
GLY
54
B
GLU
55
n
55
GLU
55
B
PRO
56
n
56
PRO
56
B
LEU
57
n
57
LEU
57
B
ASN
58
n
58
ASN
58
B
ASP
59
n
59
ASP
59
B
ASP
60
n
60
ASP
60
B
ASP
61
n
61
ASP
61
B
ARG
62
n
62
ARG
62
B
LYS
63
n
63
LYS
63
B
PRO
64
n
64
PRO
64
B
TRP
65
n
65
TRP
65
B
LEU
66
n
66
LEU
66
B
GLN
67
n
67
GLN
67
B
ALA
68
n
68
ALA
68
B
LEU
69
n
69
LEU
69
B
ASN
70
n
70
ASN
70
B
ASP
71
n
71
ASP
71
B
ALA
72
n
72
ALA
72
B
ALA
73
n
73
ALA
73
B
PHE
74
n
74
PHE
74
B
ALA
75
n
75
ALA
75
B
MET
76
n
76
MET
76
B
GLN
77
n
77
GLN
77
B
ARG
78
n
78
ARG
78
B
THR
79
n
79
THR
79
B
ASN
80
n
80
ASN
80
B
LYS
81
n
81
LYS
81
B
VAL
82
n
82
VAL
82
B
SER
83
n
83
SER
83
B
LEU
84
n
84
LEU
84
B
ILE
85
n
85
ILE
85
B
VAL
86
n
86
VAL
86
B
CYS
87
n
87
CYS
87
B
SER
88
n
88
SER
88
B
ALA
89
n
89
ALA
89
B
LEU
90
n
90
LEU
90
B
LYS
91
n
91
LYS
91
B
LYS
92
n
92
LYS
92
B
HIS
93
n
93
HIS
93
B
TYR
94
n
94
TYR
94
B
ARG
95
n
95
ARG
95
B
ASP
96
n
96
ASP
96
B
LEU
97
n
97
LEU
97
B
LEU
98
n
98
LEU
98
B
ARG
99
n
99
ARG
99
B
GLU
100
n
100
GLU
100
B
GLY
101
n
101
GLY
101
B
ASN
102
n
102
ASN
102
B
PRO
103
n
103
PRO
103
B
ASN
104
n
104
ASN
104
B
LEU
105
n
105
LEU
105
B
SER
106
n
106
SER
106
B
PHE
107
n
107
PHE
107
B
ILE
108
n
108
ILE
108
B
TYR
109
n
109
TYR
109
B
LEU
110
n
110
LEU
110
B
LYS
111
n
111
LYS
111
B
GLY
112
n
112
GLY
112
B
ASP
113
n
113
ASP
113
B
PHE
114
n
114
PHE
114
B
ASP
115
n
115
ASP
115
B
VAL
116
n
116
VAL
116
B
ILE
117
n
117
ILE
117
B
GLU
118
n
118
GLU
118
B
SER
119
n
119
SER
119
B
ARG
120
n
120
ARG
120
B
LEU
121
n
121
LEU
121
B
LYS
122
n
122
LYS
122
B
n
123
123
B
n
124
124
B
n
125
125
B
n
126
126
B
HIS
127
n
127
HIS
127
B
PHE
128
n
128
PHE
128
B
PHE
129
n
129
PHE
129
B
LYS
130
n
130
LYS
130
B
THR
131
n
131
THR
131
B
GLN
132
n
132
GLN
132
B
MET
133
n
133
MET
133
B
LEU
134
n
134
LEU
134
B
VAL
135
n
135
VAL
135
B
THR
136
n
136
THR
136
B
GLN
137
n
137
GLN
137
B
PHE
138
n
138
PHE
138
B
GLU
139
n
139
GLU
139
B
THR
140
n
140
THR
140
B
LEU
141
n
141
LEU
141
B
GLN
142
n
142
GLN
142
B
GLU
143
n
143
GLU
143
B
PRO
144
n
144
PRO
144
B
GLY
145
n
145
GLY
145
B
ALA
146
n
146
ALA
146
B
ASP
147
n
147
ASP
147
B
GLU
148
n
148
GLU
148
B
THR
149
n
149
THR
149
B
ASP
150
n
150
ASP
150
B
VAL
151
n
151
VAL
151
B
LEU
152
n
152
LEU
152
B
VAL
153
n
153
VAL
153
B
VAL
154
n
154
VAL
154
B
ASP
155
n
155
ASP
155
B
ILE
156
n
156
ILE
156
B
ASP
157
n
157
ASP
157
B
GLN
158
n
158
GLN
158
B
PRO
159
n
159
PRO
159
B
LEU
160
n
160
LEU
160
B
GLU
161
n
161
GLU
161
B
GLY
162
n
162
GLY
162
B
VAL
163
n
163
VAL
163
B
VAL
164
n
164
VAL
164
B
ALA
165
n
165
ALA
165
B
SER
166
n
166
SER
166
B
THR
167
n
167
THR
167
B
ILE
168
n
168
ILE
168
B
GLU
169
n
169
GLU
169
B
VAL
170
n
170
VAL
170
B
ILE
171
n
171
ILE
171
B
LYS
172
n
172
LYS
172
B
LYS
173
n
173
LYS
173
B
GLY
174
n
174
GLY
174
B
n
175
175
B
author_defined_assembly
2
dimeric
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
A
6PG
502
C
O3P
6PG
1_555
153.4
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
512
F
O
HOH
1_555
104.9
A
6PG
502
C
O3P
6PG
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
512
F
O
HOH
1_555
101.5
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
513
F
O
HOH
1_555
101.5
A
6PG
502
C
O3P
6PG
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
513
F
O
HOH
1_555
71.2
A
HOH
512
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
513
F
O
HOH
1_555
97.9
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
514
F
O
HOH
1_555
120.6
A
6PG
502
C
O3P
6PG
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
514
F
O
HOH
1_555
71.7
A
HOH
512
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
514
F
O
HOH
1_555
70.6
A
HOH
513
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
514
F
O
HOH
1_555
137.8
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
515
F
O
HOH
1_555
98.1
A
6PG
502
C
O3P
6PG
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
515
F
O
HOH
1_555
55.6
A
HOH
512
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
515
F
O
HOH
1_555
152.1
A
HOH
513
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
515
F
O
HOH
1_555
61.7
A
HOH
514
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
515
F
O
HOH
1_555
110.6
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
68.6
A
6PG
502
C
O3P
6PG
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
97.9
A
HOH
512
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
126.9
A
HOH
513
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
135.2
A
HOH
514
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
69.6
A
HOH
515
F
O
HOH
1_555
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
76.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
35
A
N
ALA
35
A
O
LEU
84
A
O
LEU
84
A
O
SER
83
A
O
SER
83
A
N
TYR
11
A
N
TYR
11
A
N
VAL
12
A
N
VAL
12
A
O
SER
106
A
O
SER
106
A
N
TYR
109
A
N
TYR
109
A
O
LEU
152
A
O
LEU
152
B
N
ALA
35
B
N
ALA
35
B
O
LEU
84
B
O
LEU
84
B
O
SER
83
B
O
SER
83
B
N
TYR
11
B
N
TYR
11
B
N
VAL
12
B
N
VAL
12
B
O
ILE
108
B
O
ILE
108
B
N
TYR
109
B
N
TYR
109
B
O
VAL
154
B
O
VAL
154
1
B
CG
LYS
122
B
CG
LYS
122
0
Y
1
B
CD
LYS
122
B
CD
LYS
122
0
Y
1
B
CE
LYS
122
B
CE
LYS
122
0
Y
1
B
NZ
LYS
122
B
NZ
LYS
122
0
Y
1
B
CG
HIS
127
B
CG
HIS
127
0
Y
1
B
ND1
HIS
127
B
ND1
HIS
127
0
Y
1
B
CD2
HIS
127
B
CD2
HIS
127
0
Y
1
B
CE1
HIS
127
B
CE1
HIS
127
0
Y
1
B
NE2
HIS
127
B
NE2
HIS
127
0
Y
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
LYS
175
A
LYS
175
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
SER
2
B
SER
2
1
Y
1
B
ALA
123
B
ALA
123
1
Y
1
B
ARG
124
B
ARG
124
1
Y
1
B
LYS
125
B
LYS
125
1
Y
1
B
GLY
126
B
GLY
126
1
Y
1
B
LYS
175
B
LYS
175
1
Y
1
B
B
O2P
O
6PG
HOH
503
511
1.76
1
B
B
O
O
HOH
HOH
511
512
1.79
1
A
A
O2P
O
6PG
HOH
502
514
1.84
1
A
A
O
O
HOH
HOH
511
519
1.90
1
A
A
O
O
HOH
HOH
514
517
1.92
1
B
B
O
O
PHE
HOH
129
508
2.00
1
B
B
O
O
HOH
HOH
511
513
2.11
1
B
B
O2P
O
6PG
HOH
503
512
2.15
1
A
A
O2P
O
6PG
HOH
502
517
2.16
1
B
B
NZ
OD2
LYS
ASP
92
96
2.19
1
6.79
0.90
118.30
125.09
A
A
A
CB
CG
OD2
ASP
ASP
ASP
59
59
59
N
1
7.26
0.90
118.30
125.56
A
A
A
CB
CG
OD2
ASP
ASP
ASP
96
96
96
N
1
5.67
0.90
118.30
123.97
A
A
A
CB
CG
OD2
ASP
ASP
ASP
157
157
157
N
1
5.76
0.90
118.30
124.06
B
B
B
CB
CG
OD2
ASP
ASP
ASP
40
40
40
N
1
B
B
CB
CG
HIS
HIS
127
127
-0.342
0.016
1.492
1.150
N
1
A
VAL
16
-45.01
165.80
1
A
ALA
29
-55.22
-74.67
1
A
ASN
104
-97.89
31.53
1
A
ILE
156
-68.12
3.97
1
A
ASP
157
-90.07
42.25
1
B
HIS
6
-58.81
4.50
1
B
LEU
32
-141.11
12.90
1
B
ALA
89
33.94
62.17
1
B
GLU
100
-59.61
109.25
1
B
PHE
128
161.30
153.54
1
B
ASP
157
-69.91
52.75
1
B
PRO
159
-59.59
-173.25
51.127
5.65
0.00
0.51
-0.31
0.00
-4.99
0.926
0.884
0.3090000
0.2538600
0.2566500
2.40
25.00
773
14889
14889
4.9
98.07
14.537
0.339
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.508
0.318
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.40
25.00
34
2742
35
0
2673
0.015
0.021
2748
1.937
1.962
3716
3.967
3.000
337
19.288
15.000
490
0.109
0.200
423
0.006
0.020
2061
0.294
0.300
1375
0.253
0.500
236
0.238
0.300
29
0.221
0.500
6
0.750
1.500
1690
1.385
2.000
2717
2.009
3.000
1058
3.195
4.500
999
0.5170000
0.3820000
2.409
41
878
20
51.3
2.4
48.80
1KO8
14896
14896
0
0
0.0940000
1
4.5
4.1
99.4
2.4
2.53
99.4
phasing
AMoRE
refinement
REFMAC
5.0
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
Crystal structure of gluconate kinase
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
4
N
N
4
N
N
The biological assembly is a dimer
A
GLY
20
A
GLY
20
HELX_P
A
GLN
31
A
GLN
31
1
1
12
A
ASP
40
A
ASP
40
HELX_P
A
HIS
43
A
HIS
43
5
2
4
A
PRO
44
A
PRO
44
HELX_P
A
ALA
52
A
ALA
52
1
3
9
A
ASN
58
A
ASN
58
HELX_P
A
ASN
80
A
ASN
80
1
4
23
A
LYS
91
A
LYS
91
HELX_P
A
GLU
100
A
GLU
100
1
5
10
A
ASP
113
A
ASP
113
HELX_P
A
LYS
122
A
LYS
122
1
6
10
A
LYS
130
A
LYS
130
HELX_P
A
LEU
141
A
LEU
141
1
7
12
A
PRO
159
A
PRO
159
HELX_P
A
GLY
174
A
GLY
174
1
8
16
B
GLY
20
B
GLY
20
HELX_P
B
GLN
31
B
GLN
31
1
9
12
B
ASP
40
B
ASP
40
HELX_P
B
HIS
43
B
HIS
43
5
10
4
B
PRO
44
B
PRO
44
HELX_P
B
SER
53
B
SER
53
1
11
10
B
ASN
58
B
ASN
58
HELX_P
B
ASN
80
B
ASN
80
1
12
23
B
LYS
91
B
LYS
91
HELX_P
B
GLU
100
B
GLU
100
1
13
10
B
ASP
113
B
ASP
113
HELX_P
B
LYS
122
B
LYS
122
1
14
10
B
LYS
130
B
LYS
130
HELX_P
B
LEU
141
B
LEU
141
1
15
12
B
PRO
159
B
PRO
159
HELX_P
B
GLY
174
B
GLY
174
1
16
16
metalc
2.248
A
SER
22
A
OG
SER
22
1_555
A
MG
201
D
MG
MG
1_555
metalc
2.041
A
MG
201
D
MG
MG
1_555
A
6PG
502
C
O3P
6PG
1_555
metalc
2.003
A
MG
201
D
MG
MG
1_555
A
HOH
512
F
O
HOH
1_555
metalc
2.395
A
MG
201
D
MG
MG
1_555
A
HOH
513
F
O
HOH
1_555
metalc
3.111
A
MG
201
D
MG
MG
1_555
A
HOH
514
F
O
HOH
1_555
metalc
2.962
A
MG
201
D
MG
MG
1_555
A
HOH
515
F
O
HOH
1_555
metalc
1.670
A
MG
201
D
MG
MG
1_555
A
HOH
516
F
O
HOH
1_555
TRANSFERASE
alfa/beta, TRANSFERASE
GNTK_ECOLI
UNP
1
P46859
MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTN
KVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
EGVVASTIEVIKKGK
0
174
1KO8
1
175
P46859
A
1
1
175
0
174
1KO8
1
175
P46859
B
1
1
175
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
ALA
35
A
ALA
35
A
ASP
38
A
ASP
38
A
VAL
82
A
VAL
82
A
VAL
86
A
VAL
86
A
HIS
9
A
HIS
9
A
MET
14
A
MET
14
A
LEU
105
A
LEU
105
A
LYS
111
A
LYS
111
A
VAL
151
A
VAL
151
A
ASP
155
A
ASP
155
B
ALA
35
B
ALA
35
B
ASP
38
B
ASP
38
B
VAL
82
B
VAL
82
B
VAL
86
B
VAL
86
B
HIS
9
B
HIS
9
B
MET
14
B
MET
14
B
LEU
105
B
LEU
105
B
LYS
111
B
LYS
111
B
VAL
151
B
VAL
151
B
ASP
155
B
ASP
155
BINDING SITE FOR RESIDUE 6PG A 502
A
6PG
502
Software
11
BINDING SITE FOR RESIDUE 6PG B 503
B
6PG
503
Software
7
BINDING SITE FOR RESIDUE MG A 201
A
MG
201
Software
6
A
SER
17
A
SER
17
11
1_555
A
GLY
18
A
GLY
18
11
1_555
A
ASP
40
A
ASP
40
11
1_555
A
LEU
121
A
LEU
121
11
1_555
A
HIS
127
A
HIS
127
11
1_555
A
MG
201
D
MG
11
1_555
A
HOH
513
F
HOH
11
1_555
A
HOH
514
F
HOH
11
1_555
A
HOH
515
F
HOH
11
1_555
A
HOH
516
F
HOH
11
1_555
A
HOH
517
F
HOH
11
1_555
B
SER
17
B
SER
17
7
1_555
B
GLY
18
B
GLY
18
7
1_555
B
LYS
21
B
LYS
21
7
1_555
B
HOH
510
G
HOH
7
1_555
B
HOH
511
G
HOH
7
1_555
B
HOH
512
G
HOH
7
1_555
B
HOH
513
G
HOH
7
1_555
A
SER
22
A
SER
22
6
1_555
A
6PG
502
C
6PG
6
1_555
A
HOH
512
F
HOH
6
1_555
A
HOH
513
F
HOH
6
1_555
A
HOH
515
F
HOH
6
1_555
A
HOH
516
F
HOH
6
1_555
4
P 1 21 1