0.009478 0.005472 0.000000 0.000000 0.010944 0.000000 0.000000 0.000000 0.021010 0.00000 0.00000 0.00000 Bjoras, M. Seeberg, E. Luna, L. Pearl, L.H. Barrett, T.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 105.513 105.513 47.597 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N S N 305 N O N 306 N O N 307 N O N 308 N O N 309 N N N 310 S C N 311 N C N 312 N O N 313 R C N 314 N O N 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N N Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N O N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N C N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N sing N 328 N sing Y 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 317 171 177 10.1006/jmbi.2002.5400 11902834 Reciprocal "flipping" underlies substrate recognition and catalytic activation by the human 8-oxo-guanine DNA glycosylase. 2002 10.2210/pdb1ko9/pdb pdb_00001ko9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 Sagitally focussing Ge (220) and a multilayer CCD 1999-09-15 MARRESEARCH Diamond (111), Ge (220) SINGLE WAVELENGTH M x-ray 1 0.931 1.0 ID14-3 ESRF 0.931 SYNCHROTRON ESRF BEAMLINE ID14-3 38834.164 8-oxoguanine DNA glycosylase 3.2.2.- 1 man polymer 96.063 SULFATE ION 2 syn non-polymer 18.015 water 144 nat water N-glycosylase/DNA lyase no no MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRG DKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVE RLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFS ADLRQSRHAQEPPAKRRKGSKGPEG MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRG DKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVE RLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFS ADLRQSRHAQEPPAKRRKGSKGPEG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample OGG1 9606 Homo sapiens 562 Escherichia coli BK3010 Plasmid pUC18 1 1.97 37.51 MICROBATCH 4.6 PEG 4000, Ammonium Sulphate, Sodium citrate, pH 4.6, Microbatch, temperature 277K 277 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2002-01-09 1 1 2008-04-27 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1EBM contains the same protein complexed with a DNA duplex with an 8oxo-guanine base 1FN7 contains the same protein complexed with a DNA duplex with an abasic site RCSB Y RCSB 2001-12-20 REL SO4 SULFATE ION HOH water 1EBM PDB entry 1EBM PDB experimental model SO4 400 2 SO4 SO4 400 A SO4 600 2 SO4 SO4 600 A HOH 1 3 HOH HOH 601 A HOH 2 3 HOH HOH 602 A HOH 3 3 HOH HOH 603 A HOH 4 3 HOH HOH 604 A HOH 5 3 HOH HOH 605 A HOH 6 3 HOH HOH 606 A HOH 7 3 HOH HOH 607 A HOH 8 3 HOH HOH 608 A HOH 9 3 HOH HOH 609 A HOH 10 3 HOH HOH 610 A HOH 11 3 HOH HOH 611 A HOH 12 3 HOH HOH 612 A HOH 13 3 HOH HOH 613 A HOH 14 3 HOH HOH 614 A HOH 15 3 HOH HOH 615 A HOH 16 3 HOH HOH 616 A HOH 17 3 HOH HOH 617 A HOH 18 3 HOH HOH 618 A HOH 19 3 HOH HOH 619 A HOH 20 3 HOH HOH 620 A HOH 21 3 HOH HOH 621 A HOH 22 3 HOH HOH 622 A HOH 23 3 HOH HOH 623 A HOH 24 3 HOH HOH 624 A HOH 25 3 HOH HOH 625 A HOH 26 3 HOH HOH 626 A HOH 27 3 HOH HOH 627 A HOH 28 3 HOH HOH 628 A HOH 29 3 HOH HOH 629 A HOH 30 3 HOH HOH 630 A HOH 31 3 HOH HOH 631 A HOH 32 3 HOH HOH 632 A HOH 33 3 HOH HOH 633 A HOH 34 3 HOH HOH 634 A HOH 35 3 HOH HOH 635 A HOH 36 3 HOH HOH 636 A HOH 37 3 HOH HOH 637 A HOH 38 3 HOH HOH 638 A HOH 39 3 HOH HOH 639 A HOH 40 3 HOH HOH 640 A HOH 41 3 HOH HOH 641 A HOH 42 3 HOH HOH 642 A HOH 43 3 HOH HOH 643 A HOH 44 3 HOH HOH 644 A HOH 45 3 HOH HOH 645 A HOH 46 3 HOH HOH 646 A HOH 47 3 HOH HOH 647 A HOH 48 3 HOH HOH 648 A HOH 49 3 HOH HOH 649 A HOH 50 3 HOH HOH 650 A HOH 51 3 HOH HOH 651 A HOH 52 3 HOH HOH 652 A HOH 53 3 HOH HOH 653 A HOH 54 3 HOH HOH 654 A HOH 55 3 HOH HOH 655 A HOH 56 3 HOH HOH 656 A HOH 57 3 HOH HOH 657 A HOH 58 3 HOH HOH 658 A HOH 59 3 HOH HOH 659 A HOH 60 3 HOH HOH 660 A HOH 61 3 HOH HOH 661 A HOH 62 3 HOH HOH 662 A HOH 63 3 HOH HOH 663 A HOH 64 3 HOH HOH 664 A HOH 65 3 HOH HOH 665 A HOH 66 3 HOH HOH 666 A HOH 67 3 HOH HOH 667 A HOH 68 3 HOH HOH 668 A HOH 69 3 HOH HOH 669 A HOH 70 3 HOH HOH 670 A HOH 71 3 HOH HOH 671 A HOH 72 3 HOH HOH 672 A HOH 73 3 HOH HOH 673 A HOH 74 3 HOH HOH 674 A HOH 75 3 HOH HOH 675 A HOH 76 3 HOH HOH 676 A HOH 77 3 HOH HOH 677 A HOH 78 3 HOH HOH 678 A HOH 79 3 HOH HOH 679 A HOH 80 3 HOH HOH 680 A HOH 81 3 HOH HOH 681 A HOH 82 3 HOH HOH 682 A HOH 83 3 HOH HOH 683 A HOH 84 3 HOH HOH 684 A HOH 85 3 HOH HOH 685 A HOH 86 3 HOH HOH 686 A HOH 87 3 HOH HOH 687 A HOH 88 3 HOH HOH 688 A HOH 89 3 HOH HOH 689 A HOH 90 3 HOH HOH 690 A HOH 91 3 HOH HOH 691 A HOH 92 3 HOH HOH 692 A HOH 93 3 HOH HOH 693 A HOH 94 3 HOH HOH 694 A HOH 95 3 HOH HOH 695 A HOH 96 3 HOH HOH 696 A HOH 97 3 HOH HOH 697 A HOH 98 3 HOH HOH 698 A HOH 99 3 HOH HOH 699 A HOH 100 3 HOH HOH 700 A HOH 101 3 HOH HOH 701 A HOH 102 3 HOH HOH 702 A HOH 103 3 HOH HOH 703 A HOH 104 3 HOH HOH 704 A HOH 105 3 HOH HOH 705 A HOH 106 3 HOH HOH 706 A HOH 107 3 HOH HOH 707 A HOH 108 3 HOH HOH 708 A HOH 109 3 HOH HOH 709 A HOH 110 3 HOH HOH 710 A HOH 111 3 HOH HOH 711 A HOH 112 3 HOH HOH 712 A HOH 113 3 HOH HOH 713 A HOH 114 3 HOH HOH 714 A HOH 115 3 HOH HOH 715 A HOH 116 3 HOH HOH 716 A HOH 117 3 HOH HOH 717 A HOH 118 3 HOH HOH 718 A HOH 119 3 HOH HOH 719 A HOH 120 3 HOH HOH 720 A HOH 121 3 HOH HOH 721 A HOH 122 3 HOH HOH 722 A HOH 123 3 HOH HOH 723 A HOH 124 3 HOH HOH 724 A HOH 125 3 HOH HOH 725 A HOH 126 3 HOH HOH 726 A HOH 127 3 HOH HOH 727 A HOH 128 3 HOH HOH 728 A HOH 129 3 HOH HOH 729 A HOH 130 3 HOH HOH 730 A HOH 131 3 HOH HOH 731 A HOH 132 3 HOH HOH 732 A HOH 133 3 HOH HOH 733 A HOH 134 3 HOH HOH 734 A HOH 135 3 HOH HOH 735 A HOH 136 3 HOH HOH 736 A HOH 137 3 HOH HOH 737 A HOH 138 3 HOH HOH 738 A HOH 139 3 HOH HOH 739 A HOH 140 3 HOH HOH 740 A HOH 141 3 HOH HOH 741 A HOH 142 3 HOH HOH 742 A HOH 143 3 HOH HOH 743 A HOH 144 3 HOH HOH 744 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A GLY 12 n 12 GLY 12 A HIS 13 n 13 HIS 13 A ARG 14 n 14 ARG 14 A THR 15 n 15 THR 15 A LEU 16 n 16 LEU 16 A ALA 17 n 17 ALA 17 A SER 18 n 18 SER 18 A THR 19 n 19 THR 19 A PRO 20 n 20 PRO 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A TRP 23 n 23 TRP 23 A ALA 24 n 24 ALA 24 A SER 25 n 25 SER 25 A ILE 26 n 26 ILE 26 A PRO 27 n 27 PRO 27 A CYS 28 n 28 CYS 28 A PRO 29 n 29 PRO 29 A ARG 30 n 30 ARG 30 A SER 31 n 31 SER 31 A GLU 32 n 32 GLU 32 A LEU 33 n 33 LEU 33 A ARG 34 n 34 ARG 34 A LEU 35 n 35 LEU 35 A ASP 36 n 36 ASP 36 A LEU 37 n 37 LEU 37 A VAL 38 n 38 VAL 38 A LEU 39 n 39 LEU 39 A PRO 40 n 40 PRO 40 A SER 41 n 41 SER 41 A GLY 42 n 42 GLY 42 A GLN 43 n 43 GLN 43 A SER 44 n 44 SER 44 A PHE 45 n 45 PHE 45 A ARG 46 n 46 ARG 46 A TRP 47 n 47 TRP 47 A ARG 48 n 48 ARG 48 A GLU 49 n 49 GLU 49 A GLN 50 n 50 GLN 50 A SER 51 n 51 SER 51 A PRO 52 n 52 PRO 52 A ALA 53 n 53 ALA 53 A HIS 54 n 54 HIS 54 A TRP 55 n 55 TRP 55 A SER 56 n 56 SER 56 A GLY 57 n 57 GLY 57 A VAL 58 n 58 VAL 58 A LEU 59 n 59 LEU 59 A ALA 60 n 60 ALA 60 A ASP 61 n 61 ASP 61 A GLN 62 n 62 GLN 62 A VAL 63 n 63 VAL 63 A TRP 64 n 64 TRP 64 A THR 65 n 65 THR 65 A LEU 66 n 66 LEU 66 A THR 67 n 67 THR 67 A GLN 68 n 68 GLN 68 A THR 69 n 69 THR 69 A GLU 70 n 70 GLU 70 A GLU 71 n 71 GLU 71 A GLN 72 n 72 GLN 72 A LEU 73 n 73 LEU 73 A HIS 74 n 74 HIS 74 A CYS 75 n 75 CYS 75 A THR 76 n 76 THR 76 A VAL 77 n 77 VAL 77 A TYR 78 n 78 TYR 78 A ARG 79 n 79 ARG 79 A GLY 80 n 80 GLY 80 A ASP 81 n 81 ASP 81 A LYS 82 n 82 LYS 82 A SER 83 n 83 SER 83 A GLN 84 n 84 GLN 84 A ALA 85 n 85 ALA 85 A SER 86 n 86 SER 86 A ARG 87 n 87 ARG 87 A PRO 88 n 88 PRO 88 A THR 89 n 89 THR 89 A PRO 90 n 90 PRO 90 A ASP 91 n 91 ASP 91 A GLU 92 n 92 GLU 92 A LEU 93 n 93 LEU 93 A GLU 94 n 94 GLU 94 A ALA 95 n 95 ALA 95 A VAL 96 n 96 VAL 96 A ARG 97 n 97 ARG 97 A LYS 98 n 98 LYS 98 A TYR 99 n 99 TYR 99 A PHE 100 n 100 PHE 100 A GLN 101 n 101 GLN 101 A LEU 102 n 102 LEU 102 A ASP 103 n 103 ASP 103 A VAL 104 n 104 VAL 104 A THR 105 n 105 THR 105 A LEU 106 n 106 LEU 106 A ALA 107 n 107 ALA 107 A GLN 108 n 108 GLN 108 A LEU 109 n 109 LEU 109 A TYR 110 n 110 TYR 110 A HIS 111 n 111 HIS 111 A HIS 112 n 112 HIS 112 A TRP 113 n 113 TRP 113 A GLY 114 n 114 GLY 114 A SER 115 n 115 SER 115 A VAL 116 n 116 VAL 116 A ASP 117 n 117 ASP 117 A SER 118 n 118 SER 118 A HIS 119 n 119 HIS 119 A PHE 120 n 120 PHE 120 A GLN 121 n 121 GLN 121 A GLU 122 n 122 GLU 122 A VAL 123 n 123 VAL 123 A ALA 124 n 124 ALA 124 A GLN 125 n 125 GLN 125 A LYS 126 n 126 LYS 126 A PHE 127 n 127 PHE 127 A GLN 128 n 128 GLN 128 A GLY 129 n 129 GLY 129 A VAL 130 n 130 VAL 130 A ARG 131 n 131 ARG 131 A LEU 132 n 132 LEU 132 A LEU 133 n 133 LEU 133 A ARG 134 n 134 ARG 134 A GLN 135 n 135 GLN 135 A ASP 136 n 136 ASP 136 A PRO 137 n 137 PRO 137 A ILE 138 n 138 ILE 138 A GLU 139 n 139 GLU 139 A CYS 140 n 140 CYS 140 A LEU 141 n 141 LEU 141 A PHE 142 n 142 PHE 142 A SER 143 n 143 SER 143 A PHE 144 n 144 PHE 144 A ILE 145 n 145 ILE 145 A CYS 146 n 146 CYS 146 A SER 147 n 147 SER 147 A SER 148 n 148 SER 148 A ASN 149 n 149 ASN 149 A ASN 150 n 150 ASN 150 A ASN 151 n 151 ASN 151 A ILE 152 n 152 ILE 152 A ALA 153 n 153 ALA 153 A ARG 154 n 154 ARG 154 A ILE 155 n 155 ILE 155 A THR 156 n 156 THR 156 A GLY 157 n 157 GLY 157 A MET 158 n 158 MET 158 A VAL 159 n 159 VAL 159 A GLU 160 n 160 GLU 160 A ARG 161 n 161 ARG 161 A LEU 162 n 162 LEU 162 A CYS 163 n 163 CYS 163 A GLN 164 n 164 GLN 164 A ALA 165 n 165 ALA 165 A PHE 166 n 166 PHE 166 A GLY 167 n 167 GLY 167 A PRO 168 n 168 PRO 168 A ARG 169 n 169 ARG 169 A LEU 170 n 170 LEU 170 A ILE 171 n 171 ILE 171 A GLN 172 n 172 GLN 172 A LEU 173 n 173 LEU 173 A ASP 174 n 174 ASP 174 A ASP 175 n 175 ASP 175 A VAL 176 n 176 VAL 176 A THR 177 n 177 THR 177 A TYR 178 n 178 TYR 178 A HIS 179 n 179 HIS 179 A GLY 180 n 180 GLY 180 A PHE 181 n 181 PHE 181 A PRO 182 n 182 PRO 182 A SER 183 n 183 SER 183 A LEU 184 n 184 LEU 184 A GLN 185 n 185 GLN 185 A ALA 186 n 186 ALA 186 A LEU 187 n 187 LEU 187 A ALA 188 n 188 ALA 188 A GLY 189 n 189 GLY 189 A PRO 190 n 190 PRO 190 A GLU 191 n 191 GLU 191 A VAL 192 n 192 VAL 192 A GLU 193 n 193 GLU 193 A ALA 194 n 194 ALA 194 A HIS 195 n 195 HIS 195 A LEU 196 n 196 LEU 196 A ARG 197 n 197 ARG 197 A ALA 198 n 198 LYS 198 A LEU 199 n 199 LEU 199 A GLY 200 n 200 GLY 200 A LEU 201 n 201 LEU 201 A GLY 202 n 202 GLY 202 A TYR 203 n 203 TYR 203 A ARG 204 n 204 ARG 204 A ALA 205 n 205 ALA 205 A ARG 206 n 206 ARG 206 A TYR 207 n 207 TYR 207 A VAL 208 n 208 VAL 208 A SER 209 n 209 SER 209 A ALA 210 n 210 ALA 210 A SER 211 n 211 SER 211 A ALA 212 n 212 ALA 212 A ARG 213 n 213 ARG 213 A ALA 214 n 214 ALA 214 A ILE 215 n 215 ILE 215 A LEU 216 n 216 LEU 216 A GLU 217 n 217 GLU 217 A GLU 218 n 218 GLU 218 A GLN 219 n 219 GLN 219 A GLY 220 n 220 GLY 220 A GLY 221 n 221 GLY 221 A LEU 222 n 222 LEU 222 A ALA 223 n 223 ALA 223 A TRP 224 n 224 TRP 224 A LEU 225 n 225 LEU 225 A ALA 226 n 226 GLN 226 A ALA 227 n 227 GLN 227 A LEU 228 n 228 LEU 228 A ARG 229 n 229 ARG 229 A GLU 230 n 230 GLU 230 A SER 231 n 231 SER 231 A SER 232 n 232 SER 232 A TYR 233 n 233 TYR 233 A GLU 234 n 234 GLU 234 A GLU 235 n 235 GLU 235 A ALA 236 n 236 ALA 236 A HIS 237 n 237 HIS 237 A LYS 238 n 238 LYS 238 A ALA 239 n 239 ALA 239 A LEU 240 n 240 LEU 240 A CYS 241 n 241 CYS 241 A ILE 242 n 242 ILE 242 A LEU 243 n 243 LEU 243 A PRO 244 n 244 PRO 244 A GLY 245 n 245 GLY 245 A VAL 246 n 246 VAL 246 A GLY 247 n 247 GLY 247 A THR 248 n 248 THR 248 A LYS 249 n 249 LYS 249 A VAL 250 n 250 VAL 250 A ALA 251 n 251 ALA 251 A ASP 252 n 252 ASP 252 A CYS 253 n 253 CYS 253 A ILE 254 n 254 ILE 254 A CYS 255 n 255 CYS 255 A LEU 256 n 256 LEU 256 A MET 257 n 257 MET 257 A ALA 258 n 258 ALA 258 A LEU 259 n 259 LEU 259 A ASP 260 n 260 ASP 260 A LYS 261 n 261 LYS 261 A PRO 262 n 262 PRO 262 A GLN 263 n 263 GLN 263 A ALA 264 n 264 ALA 264 A VAL 265 n 265 VAL 265 A PRO 266 n 266 PRO 266 A VAL 267 n 267 VAL 267 A ASP 268 n 268 ASP 268 A VAL 269 n 269 VAL 269 A HIS 270 n 270 HIS 270 A MET 271 n 271 MET 271 A TRP 272 n 272 TRP 272 A HIS 273 n 273 HIS 273 A ILE 274 n 274 ILE 274 A ALA 275 n 275 ALA 275 A GLN 276 n 276 GLN 276 A ARG 277 n 277 ARG 277 A ASP 278 n 278 ASP 278 A TYR 279 n 279 TYR 279 A SER 280 n 280 SER 280 A TRP 281 n 281 TRP 281 A HIS 282 n 282 HIS 282 A PRO 283 n 283 PRO 283 A THR 284 n 284 THR 284 A THR 285 n 285 THR 285 A SER 286 n 286 SER 286 A ALA 287 n 287 GLN 287 A ALA 288 n 288 ALA 288 A LYS 289 n 289 LYS 289 A GLY 290 n 290 GLY 290 A PRO 291 n 291 PRO 291 A SER 292 n 292 SER 292 A PRO 293 n 293 PRO 293 A ALA 294 n 294 GLN 294 A THR 295 n 295 THR 295 A ASN 296 n 296 ASN 296 A LYS 297 n 297 LYS 297 A GLU 298 n 298 GLU 298 A LEU 299 n 299 LEU 299 A GLY 300 n 300 GLY 300 A ASN 301 n 301 ASN 301 A PHE 302 n 302 PHE 302 A PHE 303 n 303 PHE 303 A ARG 304 n 304 ARG 304 A SER 305 n 305 SER 305 A LEU 306 n 306 LEU 306 A TRP 307 n 307 TRP 307 A GLY 308 n 308 GLY 308 A PRO 309 n 309 PRO 309 A TYR 310 n 310 TYR 310 A ALA 311 n 311 ALA 311 A GLY 312 n 312 GLY 312 A TRP 313 n 313 TRP 313 A ALA 314 n 314 ALA 314 A GLN 315 n 315 GLN 315 A ALA 316 n 316 ALA 316 A VAL 317 n 317 VAL 317 A LEU 318 n 318 LEU 318 A PHE 319 n 319 PHE 319 A SER 320 n 320 SER 320 A ALA 321 n 321 ALA 321 A ASP 322 n 322 ASP 322 A LEU 323 n 323 LEU 323 A n 324 324 A n 325 325 A n 326 326 A n 327 327 A n 328 328 A n 329 329 A n 330 330 A n 331 331 A n 332 332 A n 333 333 A n 334 334 A n 335 335 A n 336 336 A n 337 337 A n 338 338 A n 339 339 A n 340 340 A n 341 341 A n 342 342 A n 343 343 A n 344 344 A n 345 345 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 24 A N ALA 24 A O CYS 75 A O CYS 75 A O HIS 74 A O HIS 74 A N THR 67 A N THR 67 A O TRP 64 A O TRP 64 A N GLY 57 A N GLY 57 A O HIS 54 A O HIS 54 A N SER 51 A N SER 51 A N ILE 171 A N ILE 171 A O TYR 178 A O TYR 178 1 A CG GLU 191 A CG GLU 191 1 Y 1 A CD GLU 191 A CD GLU 191 1 Y 1 A OE1 GLU 191 A OE1 GLU 191 1 Y 1 A OE2 GLU 191 A OE2 GLU 191 1 Y 1 A CG LYS 198 A CG LYS 198 1 Y 1 A CD LYS 198 A CD LYS 198 1 Y 1 A CE LYS 198 A CE LYS 198 1 Y 1 A NZ LYS 198 A NZ LYS 198 1 Y 1 A CG GLN 226 A CG GLN 226 1 Y 1 A CD GLN 226 A CD GLN 226 1 Y 1 A OE1 GLN 226 A OE1 GLN 226 1 Y 1 A NE2 GLN 226 A NE2 GLN 226 1 Y 1 A CG GLN 227 A CG GLN 227 1 Y 1 A CD GLN 227 A CD GLN 227 1 Y 1 A OE1 GLN 227 A OE1 GLN 227 1 Y 1 A NE2 GLN 227 A NE2 GLN 227 1 Y 1 A CG GLU 230 A CG GLU 230 1 Y 1 A CD GLU 230 A CD GLU 230 1 Y 1 A OE1 GLU 230 A OE1 GLU 230 1 Y 1 A OE2 GLU 230 A OE2 GLU 230 1 Y 1 A CG GLN 287 A CG GLN 287 1 Y 1 A CD GLN 287 A CD GLN 287 1 Y 1 A OE1 GLN 287 A OE1 GLN 287 1 Y 1 A NE2 GLN 287 A NE2 GLN 287 1 Y 1 A CG GLN 294 A CG GLN 294 1 Y 1 A CD GLN 294 A CD GLN 294 1 Y 1 A OE1 GLN 294 A OE1 GLN 294 1 Y 1 A NE2 GLN 294 A NE2 GLN 294 1 Y 1 A MET 1 A MET 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A ALA 3 A ALA 3 1 Y 1 A ARG 4 A ARG 4 1 Y 1 A ALA 5 A ALA 5 1 Y 1 A LEU 6 A LEU 6 1 Y 1 A LEU 7 A LEU 7 1 Y 1 A PRO 8 A PRO 8 1 Y 1 A ARG 9 A ARG 9 1 Y 1 A ARG 10 A ARG 10 1 Y 1 A MET 11 A MET 11 1 Y 1 A ARG 324 A ARG 324 1 Y 1 A GLN 325 A GLN 325 1 Y 1 A SER 326 A SER 326 1 Y 1 A ARG 327 A ARG 327 1 Y 1 A HIS 328 A HIS 328 1 Y 1 A ALA 329 A ALA 329 1 Y 1 A GLN 330 A GLN 330 1 Y 1 A GLU 331 A GLU 331 1 Y 1 A PRO 332 A PRO 332 1 Y 1 A PRO 333 A PRO 333 1 Y 1 A ALA 334 A ALA 334 1 Y 1 A LYS 335 A LYS 335 1 Y 1 A ARG 336 A ARG 336 1 Y 1 A ARG 337 A ARG 337 1 Y 1 A LYS 338 A LYS 338 1 Y 1 A GLY 339 A GLY 339 1 Y 1 A SER 340 A SER 340 1 Y 1 A LYS 341 A LYS 341 1 Y 1 A GLY 342 A GLY 342 1 Y 1 A PRO 343 A PRO 343 1 Y 1 A GLU 344 A GLU 344 1 Y 1 A GLY 345 A GLY 345 1 Y 1 A CYS 28 -168.34 106.50 1 A GLN 43 -99.71 -60.64 1 A SER 148 -66.54 -175.76 1 A ASP 174 58.27 -124.94 1 A GLU 217 -123.46 -86.39 1 A THR 284 -138.12 -40.51 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP 33.4 0.65 2.69 0.00 0.65 0.00 -1.30 Used maximum likelihood target in a simulated annealing/energy minimization procedure 0.2520000 0.009 0.2060000 0.2100000 0.2100000 2.15 23.07 832 17891 17891 5.0 99.9 RANDOM 1610720.58 0.000000 1 RESTRAINED THROUGHOUT 0.0 0.00 MOLECULAR REPLACEMENT PDB entry 1EBM Engh & Huber FLAT MODEL 43.698 0.358944 0.30 0.25 5.00 0.16 0.14 2.15 23.07 144 2599 10 0 2445 0.006 1.1 21.7 0.85 1.41 1.50 2.20 2.00 2.24 2.00 3.24 2.50 0.2710000 0.025 0.2160000 2.28 116 2620 2603 6 4.2 99.9 23.4 2.15 25 1KO9 17927 17891 2.0 2.0 0.0400000 0.0400000 1 13.4 3.8 99.9 0.2150000 2.15 2.27 3.5 2402 0.2150000 3.8 99.9 phasing AMoRE refinement CNS 1.1 data reduction DENZO data scaling SCALEPACK Native Structure of the Human 8-oxoguanine DNA Glycosylase hOGG1 1 N N 2 N N 2 N N 3 N N A THR 19 A THR 19 HELX_P A TRP 23 A TRP 23 5 1 5 A ARG 34 A ARG 34 HELX_P A LEU 39 A LEU 39 1 2 6 A THR 89 A THR 89 HELX_P A PHE 100 A PHE 100 1 3 12 A THR 105 A THR 105 HELX_P A ASP 117 A ASP 117 1 4 13 A ASP 117 A ASP 117 HELX_P A PHE 127 A PHE 127 1 5 11 A ASP 136 A ASP 136 HELX_P A CYS 146 A CYS 146 1 6 11 A ASN 151 A ASN 151 HELX_P A GLY 167 A GLY 167 1 7 17 A SER 183 A SER 183 HELX_P A GLY 189 A GLY 189 1 8 7 A GLU 191 A GLU 191 HELX_P A GLY 200 A GLY 200 1 9 10 A ARG 204 A ARG 204 HELX_P A GLU 217 A GLU 217 1 10 14 A GLY 221 A GLY 221 HELX_P A ARG 229 A ARG 229 1 11 9 A SER 232 A SER 232 HELX_P A CYS 241 A CYS 241 1 12 10 A GLY 247 A GLY 247 HELX_P A ALA 258 A ALA 258 1 13 12 A ASP 268 A ASP 268 HELX_P A SER 280 A SER 280 1 14 13 A SER 292 A SER 292 HELX_P A GLY 308 A GLY 308 1 15 17 A TYR 310 A TYR 310 HELX_P A LEU 323 A LEU 323 1 16 14 HYDROLASE helix-hairpin-helix DNA-glycosylase, HYDROLASE OGG1_HUMAN UNP 1 1 O15527 MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRG DKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVE RLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL CILPGVGTKVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFS ADLRQSRHAQEPPAKRRKGSKGPEG 1 345 1KO9 1 345 O15527 A 1 1 345 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ALA 24 A ALA 24 A PRO 27 A PRO 27 A GLN 72 A GLN 72 A VAL 77 A VAL 77 A VAL 63 A VAL 63 A GLN 68 A GLN 68 A HIS 54 A HIS 54 A VAL 58 A VAL 58 A TRP 47 A TRP 47 A SER 51 A SER 51 A ARG 169 A ARG 169 A LEU 173 A LEU 173 A VAL 176 A VAL 176 A HIS 179 A HIS 179 BINDING SITE FOR RESIDUE SO4 A 400 A SO4 400 Software 8 BINDING SITE FOR RESIDUE SO4 A 600 A SO4 600 Software 7 A SER 147 A SER 147 8 1_555 A SER 148 A SER 148 8 1_555 A PRO 168 A PRO 168 8 5_665 A ARG 169 A ARG 169 8 5_665 A ARG 204 A ARG 204 8 1_555 A HOH 622 D HOH 8 1_555 A HOH 718 D HOH 8 1_555 A HOH 732 D HOH 8 1_555 A THR 69 A THR 69 7 3_665 A GLU 70 A GLU 70 7 3_665 A GLU 71 A GLU 71 7 3_665 A GLN 72 A GLN 72 7 3_665 A GLY 308 A GLY 308 7 2_654 A PRO 309 A PRO 309 7 2_654 A HOH 684 D HOH 7 2_654 170 P 65