0.023397
0.000000
0.006603
0.000000
0.011311
0.000000
0.000000
0.000000
0.020184
0.00000
0.00000
0.00000
Kraft, L.
Sprenger, G.A.
Lindqvist, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
105.76
90.00
42.740
88.410
51.480
C11 H18 N5 O12 P3
505.208
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
C
N
9
R
P
N
10
N
O
N
11
N
O
N
12
N
O
N
13
N
O
N
14
N
C
N
15
R
C
N
16
N
O
N
17
S
C
N
18
N
O
N
19
R
C
N
20
N
O
N
21
R
C
Y
22
N
N
Y
23
N
C
Y
24
N
N
Y
25
N
C
Y
26
N
C
N
27
N
N
Y
28
N
N
Y
29
N
C
Y
30
N
N
Y
31
N
C
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
N
N
51
S
C
N
52
N
C
N
53
N
O
N
54
N
C
N
55
N
O
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
N
N
64
S
C
N
65
N
C
N
66
N
O
N
67
N
C
N
68
N
C
N
69
N
C
N
70
N
N
N
71
N
C
N
72
N
N
N
73
N
N
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
N
N
91
S
C
N
92
N
C
N
93
N
O
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
R
C
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
S
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
N
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
S
C
N
159
N
C
N
160
N
O
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
O
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
Y
191
N
C
Y
192
N
N
Y
193
N
C
Y
194
N
C
Y
195
N
N
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
S
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
N
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
S
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
MG
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
R
C
N
359
N
O
N
360
N
C
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
N
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
N
409
N
O
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
Y
37
N
sing
Y
38
N
sing
Y
39
N
doub
N
40
N
sing
Y
41
N
sing
Y
42
N
sing
Y
43
N
doub
N
44
N
sing
Y
45
N
doub
N
46
N
sing
N
47
N
sing
Y
48
N
sing
Y
49
N
doub
N
50
N
sing
Y
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
Y
191
N
sing
Y
192
N
doub
Y
193
N
doub
N
194
N
sing
Y
195
N
sing
N
196
N
sing
Y
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
Y
299
N
doub
Y
300
N
sing
Y
301
N
sing
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
doub
N
403
N
sing
Y
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
318
1057
1069
10.1016/S0022-2836(02)00215-2
12054802
Conformational changes during the catalytic cycle of gluconate kinase as revealed by X-ray crystallography.
2002
10.2210/pdb1kof/pdb
pdb_00001kof
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-06-20
BRUKER SMART 1000
SINGLE WAVELENGTH
M
x-ray
1
1.093
1.0
I711
MAX II
1.093
SYNCHROTRON
MAX II BEAMLINE I711
19572.295
Gluconate kinase
2.7.1.12
2
man
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
505.208
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
2
syn
non-polymer
18.015
water
67
nat
water
Thermoresistant gluconokinase
no
no
MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTN
KVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
EGVVASTIEVIKKGK
MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTN
KVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
EGVVASTIEVIKKGK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
gntk
562
Escherichia coli
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pJF119EH
1
2.39
48.55
VAPOR DIFFUSION, HANGING DROP
7.2
PEG6000, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
diffrn_source
refine
reflns
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
refine_hist
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-05-29
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-05-16
1
4
2024-03-13
_diffrn_source.pdbx_synchrotron_site
_refine.ls_d_res_low
_reflns.d_resolution_low
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_refine_hist.d_res_low
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1KNQ contains the same protein, space group P212121.
1KO1 contains the same protein, space group C2.
1KO4 contains the same protein, space group P21212.
1KO5 contains the same protein complexed with ATP.
1KO8 contains the same protein complexed with gluconate-6-phosphate.
RCSB
Y
PDBJ
2001-12-20
REL
REL
MG
MAGNESIUM ION
ACP
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
HOH
water
MG
1
2
MG
MG
1001
A
ACP
500
3
ACP
ACP
500
A
MG
2
2
MG
MG
1002
B
ACP
500
3
ACP
ACP
501
B
HOH
3
4
HOH
HOH
1002
A
HOH
4
4
HOH
HOH
1003
A
HOH
5
4
HOH
HOH
1004
A
HOH
6
4
HOH
HOH
1005
A
HOH
10
4
HOH
HOH
1006
A
HOH
11
4
HOH
HOH
1007
A
HOH
14
4
HOH
HOH
1008
A
HOH
15
4
HOH
HOH
1009
A
HOH
17
4
HOH
HOH
1010
A
HOH
18
4
HOH
HOH
1011
A
HOH
22
4
HOH
HOH
1012
A
HOH
23
4
HOH
HOH
1013
A
HOH
24
4
HOH
HOH
1014
A
HOH
26
4
HOH
HOH
1015
A
HOH
28
4
HOH
HOH
1016
A
HOH
29
4
HOH
HOH
1017
A
HOH
32
4
HOH
HOH
1018
A
HOH
36
4
HOH
HOH
1019
A
HOH
37
4
HOH
HOH
1020
A
HOH
38
4
HOH
HOH
1021
A
HOH
40
4
HOH
HOH
1022
A
HOH
42
4
HOH
HOH
1023
A
HOH
43
4
HOH
HOH
1024
A
HOH
44
4
HOH
HOH
1025
A
HOH
45
4
HOH
HOH
1026
A
HOH
46
4
HOH
HOH
1027
A
HOH
48
4
HOH
HOH
1028
A
HOH
49
4
HOH
HOH
1029
A
HOH
52
4
HOH
HOH
1030
A
HOH
54
4
HOH
HOH
1031
A
HOH
57
4
HOH
HOH
1032
A
HOH
62
4
HOH
HOH
1033
A
HOH
65
4
HOH
HOH
1034
A
HOH
67
4
HOH
HOH
1035
A
HOH
7
4
HOH
HOH
1003
B
HOH
8
4
HOH
HOH
1004
B
HOH
9
4
HOH
HOH
1005
B
HOH
12
4
HOH
HOH
1006
B
HOH
13
4
HOH
HOH
1007
B
HOH
16
4
HOH
HOH
1008
B
HOH
19
4
HOH
HOH
1009
B
HOH
20
4
HOH
HOH
1010
B
HOH
21
4
HOH
HOH
1011
B
HOH
25
4
HOH
HOH
1012
B
HOH
27
4
HOH
HOH
1013
B
HOH
30
4
HOH
HOH
1014
B
HOH
31
4
HOH
HOH
1015
B
HOH
33
4
HOH
HOH
1016
B
HOH
34
4
HOH
HOH
1017
B
HOH
35
4
HOH
HOH
1018
B
HOH
39
4
HOH
HOH
1019
B
HOH
41
4
HOH
HOH
1020
B
HOH
47
4
HOH
HOH
1021
B
HOH
50
4
HOH
HOH
1022
B
HOH
51
4
HOH
HOH
1023
B
HOH
53
4
HOH
HOH
1024
B
HOH
55
4
HOH
HOH
1025
B
HOH
56
4
HOH
HOH
1026
B
HOH
58
4
HOH
HOH
1027
B
HOH
59
4
HOH
HOH
1028
B
HOH
60
4
HOH
HOH
1029
B
HOH
61
4
HOH
HOH
1030
B
HOH
63
4
HOH
HOH
1031
B
HOH
64
4
HOH
HOH
1032
B
HOH
66
4
HOH
HOH
1033
B
HOH
68
4
HOH
HOH
1034
B
HOH
69
4
HOH
HOH
1035
B
n
1
1
A
n
2
2
A
THR
3
n
3
THR
3
A
THR
4
n
4
THR
4
A
ASN
5
n
5
ASN
5
A
HIS
6
n
6
HIS
6
A
ASP
7
n
7
ASP
7
A
HIS
8
n
8
HIS
8
A
HIS
9
n
9
HIS
9
A
ILE
10
n
10
ILE
10
A
TYR
11
n
11
TYR
11
A
VAL
12
n
12
VAL
12
A
LEU
13
n
13
LEU
13
A
MET
14
n
14
MET
14
A
GLY
15
n
15
GLY
15
A
VAL
16
n
16
VAL
16
A
SER
17
n
17
SER
17
A
GLY
18
n
18
GLY
18
A
SER
19
n
19
SER
19
A
GLY
20
n
20
GLY
20
A
LYS
21
n
21
LYS
21
A
SER
22
n
22
SER
22
A
ALA
23
n
23
ALA
23
A
VAL
24
n
24
VAL
24
A
ALA
25
n
25
ALA
25
A
SER
26
n
26
SER
26
A
GLU
27
n
27
GLU
27
A
VAL
28
n
28
VAL
28
A
ALA
29
n
29
ALA
29
A
HIS
30
n
30
HIS
30
A
GLN
31
n
31
GLN
31
A
LEU
32
n
32
LEU
32
A
HIS
33
n
33
HIS
33
A
ALA
34
n
34
ALA
34
A
ALA
35
n
35
ALA
35
A
PHE
36
n
36
PHE
36
A
LEU
37
n
37
LEU
37
A
ASP
38
n
38
ASP
38
A
GLY
39
n
39
GLY
39
A
ASP
40
n
40
ASP
40
A
PHE
41
n
41
PHE
41
A
LEU
42
n
42
LEU
42
A
HIS
43
n
43
HIS
43
A
PRO
44
n
44
PRO
44
A
ARG
45
n
45
ARG
45
A
ARG
46
n
46
ARG
46
A
ASN
47
n
47
ASN
47
A
ILE
48
n
48
ILE
48
A
GLU
49
n
49
GLU
49
A
LYS
50
n
50
LYS
50
A
MET
51
n
51
MET
51
A
ALA
52
n
52
ALA
52
A
SER
53
n
53
SER
53
A
GLY
54
n
54
GLY
54
A
GLU
55
n
55
GLU
55
A
PRO
56
n
56
PRO
56
A
LEU
57
n
57
LEU
57
A
ASN
58
n
58
ASN
58
A
ASP
59
n
59
ASP
59
A
ASP
60
n
60
ASP
60
A
ASP
61
n
61
ASP
61
A
ARG
62
n
62
ARG
62
A
LYS
63
n
63
LYS
63
A
PRO
64
n
64
PRO
64
A
TRP
65
n
65
TRP
65
A
LEU
66
n
66
LEU
66
A
GLN
67
n
67
GLN
67
A
ALA
68
n
68
ALA
68
A
LEU
69
n
69
LEU
69
A
ASN
70
n
70
ASN
70
A
ASP
71
n
71
ASP
71
A
ALA
72
n
72
ALA
72
A
ALA
73
n
73
ALA
73
A
PHE
74
n
74
PHE
74
A
ALA
75
n
75
ALA
75
A
MET
76
n
76
MET
76
A
GLN
77
n
77
GLN
77
A
ARG
78
n
78
ARG
78
A
THR
79
n
79
THR
79
A
ASN
80
n
80
ASN
80
A
LYS
81
n
81
LYS
81
A
VAL
82
n
82
VAL
82
A
SER
83
n
83
SER
83
A
LEU
84
n
84
LEU
84
A
ILE
85
n
85
ILE
85
A
VAL
86
n
86
VAL
86
A
CYS
87
n
87
CYS
87
A
SER
88
n
88
SER
88
A
ALA
89
n
89
ALA
89
A
LEU
90
n
90
LEU
90
A
LYS
91
n
91
LYS
91
A
LYS
92
n
92
LYS
92
A
HIS
93
n
93
HIS
93
A
TYR
94
n
94
TYR
94
A
ARG
95
n
95
ARG
95
A
ASP
96
n
96
ASP
96
A
LEU
97
n
97
LEU
97
A
LEU
98
n
98
LEU
98
A
ARG
99
n
99
ARG
99
A
GLU
100
n
100
GLU
100
A
GLY
101
n
101
GLY
101
A
ASN
102
n
102
ASN
102
A
PRO
103
n
103
PRO
103
A
ASN
104
n
104
ASN
104
A
LEU
105
n
105
LEU
105
A
SER
106
n
106
SER
106
A
PHE
107
n
107
PHE
107
A
ILE
108
n
108
ILE
108
A
TYR
109
n
109
TYR
109
A
LEU
110
n
110
LEU
110
A
LYS
111
n
111
LYS
111
A
GLY
112
n
112
GLY
112
A
ASP
113
n
113
ASP
113
A
PHE
114
n
114
PHE
114
A
ASP
115
n
115
ASP
115
A
VAL
116
n
116
VAL
116
A
ILE
117
n
117
ILE
117
A
GLU
118
n
118
GLU
118
A
SER
119
n
119
SER
119
A
ARG
120
n
120
ARG
120
A
LEU
121
n
121
LEU
121
A
LYS
122
n
122
LYS
122
A
ALA
123
n
123
ALA
123
A
ARG
124
n
124
ARG
124
A
LYS
125
n
125
LYS
125
A
GLY
126
n
126
GLY
126
A
HIS
127
n
127
HIS
127
A
PHE
128
n
128
PHE
128
A
PHE
129
n
129
PHE
129
A
LYS
130
n
130
LYS
130
A
THR
131
n
131
THR
131
A
GLN
132
n
132
GLN
132
A
MET
133
n
133
MET
133
A
LEU
134
n
134
LEU
134
A
VAL
135
n
135
VAL
135
A
THR
136
n
136
THR
136
A
GLN
137
n
137
GLN
137
A
PHE
138
n
138
PHE
138
A
GLU
139
n
139
GLU
139
A
THR
140
n
140
THR
140
A
LEU
141
n
141
LEU
141
A
GLN
142
n
142
GLN
142
A
GLU
143
n
143
GLU
143
A
PRO
144
n
144
PRO
144
A
GLY
145
n
145
GLY
145
A
ALA
146
n
146
ALA
146
A
ASP
147
n
147
ASP
147
A
GLU
148
n
148
GLU
148
A
THR
149
n
149
THR
149
A
ASP
150
n
150
ASP
150
A
VAL
151
n
151
VAL
151
A
LEU
152
n
152
LEU
152
A
VAL
153
n
153
VAL
153
A
VAL
154
n
154
VAL
154
A
ASP
155
n
155
ASP
155
A
ILE
156
n
156
ILE
156
A
ASP
157
n
157
ASP
157
A
GLN
158
n
158
GLN
158
A
PRO
159
n
159
PRO
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
VAL
163
n
163
VAL
163
A
VAL
164
n
164
VAL
164
A
ALA
165
n
165
ALA
165
A
SER
166
n
166
SER
166
A
THR
167
n
167
THR
167
A
ILE
168
n
168
ILE
168
A
GLU
169
n
169
GLU
169
A
VAL
170
n
170
VAL
170
A
ILE
171
n
171
ILE
171
A
LYS
172
n
172
LYS
172
A
LYS
173
n
173
LYS
173
A
n
174
174
A
n
175
175
A
n
1
1
B
n
2
2
B
THR
3
n
3
THR
3
B
THR
4
n
4
THR
4
B
ASN
5
n
5
ASN
5
B
HIS
6
n
6
HIS
6
B
ASP
7
n
7
ASP
7
B
HIS
8
n
8
HIS
8
B
HIS
9
n
9
HIS
9
B
ILE
10
n
10
ILE
10
B
TYR
11
n
11
TYR
11
B
VAL
12
n
12
VAL
12
B
LEU
13
n
13
LEU
13
B
MET
14
n
14
MET
14
B
GLY
15
n
15
GLY
15
B
VAL
16
n
16
VAL
16
B
SER
17
n
17
SER
17
B
GLY
18
n
18
GLY
18
B
SER
19
n
19
SER
19
B
GLY
20
n
20
GLY
20
B
LYS
21
n
21
LYS
21
B
SER
22
n
22
SER
22
B
ALA
23
n
23
ALA
23
B
VAL
24
n
24
VAL
24
B
ALA
25
n
25
ALA
25
B
SER
26
n
26
SER
26
B
GLU
27
n
27
GLU
27
B
VAL
28
n
28
VAL
28
B
ALA
29
n
29
ALA
29
B
HIS
30
n
30
HIS
30
B
GLN
31
n
31
GLN
31
B
LEU
32
n
32
LEU
32
B
HIS
33
n
33
HIS
33
B
ALA
34
n
34
ALA
34
B
ALA
35
n
35
ALA
35
B
PHE
36
n
36
PHE
36
B
LEU
37
n
37
LEU
37
B
ASP
38
n
38
ASP
38
B
GLY
39
n
39
GLY
39
B
ASP
40
n
40
ASP
40
B
PHE
41
n
41
PHE
41
B
LEU
42
n
42
LEU
42
B
HIS
43
n
43
HIS
43
B
PRO
44
n
44
PRO
44
B
ARG
45
n
45
ARG
45
B
ARG
46
n
46
ARG
46
B
ASN
47
n
47
ASN
47
B
ILE
48
n
48
ILE
48
B
GLU
49
n
49
GLU
49
B
LYS
50
n
50
LYS
50
B
MET
51
n
51
MET
51
B
ALA
52
n
52
ALA
52
B
SER
53
n
53
SER
53
B
GLY
54
n
54
GLY
54
B
GLU
55
n
55
GLU
55
B
PRO
56
n
56
PRO
56
B
LEU
57
n
57
LEU
57
B
ASN
58
n
58
ASN
58
B
ASP
59
n
59
ASP
59
B
ASP
60
n
60
ASP
60
B
ASP
61
n
61
ASP
61
B
ARG
62
n
62
ARG
62
B
LYS
63
n
63
LYS
63
B
PRO
64
n
64
PRO
64
B
TRP
65
n
65
TRP
65
B
LEU
66
n
66
LEU
66
B
GLN
67
n
67
GLN
67
B
ALA
68
n
68
ALA
68
B
LEU
69
n
69
LEU
69
B
ASN
70
n
70
ASN
70
B
ASP
71
n
71
ASP
71
B
ALA
72
n
72
ALA
72
B
ALA
73
n
73
ALA
73
B
PHE
74
n
74
PHE
74
B
ALA
75
n
75
ALA
75
B
MET
76
n
76
MET
76
B
GLN
77
n
77
GLN
77
B
ARG
78
n
78
ARG
78
B
THR
79
n
79
THR
79
B
ASN
80
n
80
ASN
80
B
LYS
81
n
81
LYS
81
B
VAL
82
n
82
VAL
82
B
SER
83
n
83
SER
83
B
LEU
84
n
84
LEU
84
B
ILE
85
n
85
ILE
85
B
VAL
86
n
86
VAL
86
B
CYS
87
n
87
CYS
87
B
SER
88
n
88
SER
88
B
ALA
89
n
89
ALA
89
B
LEU
90
n
90
LEU
90
B
LYS
91
n
91
LYS
91
B
LYS
92
n
92
LYS
92
B
HIS
93
n
93
HIS
93
B
TYR
94
n
94
TYR
94
B
ARG
95
n
95
ARG
95
B
ASP
96
n
96
ASP
96
B
LEU
97
n
97
LEU
97
B
LEU
98
n
98
LEU
98
B
ARG
99
n
99
ARG
99
B
GLU
100
n
100
GLU
100
B
GLY
101
n
101
GLY
101
B
ASN
102
n
102
ASN
102
B
PRO
103
n
103
PRO
103
B
ASN
104
n
104
ASN
104
B
LEU
105
n
105
LEU
105
B
SER
106
n
106
SER
106
B
PHE
107
n
107
PHE
107
B
ILE
108
n
108
ILE
108
B
TYR
109
n
109
TYR
109
B
LEU
110
n
110
LEU
110
B
LYS
111
n
111
LYS
111
B
GLY
112
n
112
GLY
112
B
ASP
113
n
113
ASP
113
B
PHE
114
n
114
PHE
114
B
ASP
115
n
115
ASP
115
B
VAL
116
n
116
VAL
116
B
ILE
117
n
117
ILE
117
B
GLU
118
n
118
GLU
118
B
SER
119
n
119
SER
119
B
ARG
120
n
120
ARG
120
B
LEU
121
n
121
LEU
121
B
LYS
122
n
122
LYS
122
B
ALA
123
n
123
ALA
123
B
ARG
124
n
124
ARG
124
B
LYS
125
n
125
LYS
125
B
GLY
126
n
126
GLY
126
B
HIS
127
n
127
HIS
127
B
PHE
128
n
128
PHE
128
B
PHE
129
n
129
PHE
129
B
LYS
130
n
130
LYS
130
B
THR
131
n
131
THR
131
B
GLN
132
n
132
GLN
132
B
MET
133
n
133
MET
133
B
LEU
134
n
134
LEU
134
B
VAL
135
n
135
VAL
135
B
THR
136
n
136
THR
136
B
GLN
137
n
137
GLN
137
B
PHE
138
n
138
PHE
138
B
GLU
139
n
139
GLU
139
B
THR
140
n
140
THR
140
B
LEU
141
n
141
LEU
141
B
GLN
142
n
142
GLN
142
B
GLU
143
n
143
GLU
143
B
PRO
144
n
144
PRO
144
B
GLY
145
n
145
GLY
145
B
ALA
146
n
146
ALA
146
B
ASP
147
n
147
ASP
147
B
GLU
148
n
148
GLU
148
B
THR
149
n
149
THR
149
B
ASP
150
n
150
ASP
150
B
VAL
151
n
151
VAL
151
B
LEU
152
n
152
LEU
152
B
VAL
153
n
153
VAL
153
B
VAL
154
n
154
VAL
154
B
ASP
155
n
155
ASP
155
B
ILE
156
n
156
ILE
156
B
ASP
157
n
157
ASP
157
B
GLN
158
n
158
GLN
158
B
PRO
159
n
159
PRO
159
B
LEU
160
n
160
LEU
160
B
GLU
161
n
161
GLU
161
B
GLY
162
n
162
GLY
162
B
VAL
163
n
163
VAL
163
B
VAL
164
n
164
VAL
164
B
ALA
165
n
165
ALA
165
B
SER
166
n
166
SER
166
B
THR
167
n
167
THR
167
B
ILE
168
n
168
ILE
168
B
GLU
169
n
169
GLU
169
B
VAL
170
n
170
VAL
170
B
ILE
171
n
171
ILE
171
B
LYS
172
n
172
LYS
172
B
LYS
173
n
173
LYS
173
B
n
174
174
B
n
175
175
B
author_and_software_defined_assembly
PISA
2
dimeric
3820
-35
16580
A
SER
22
A
OG
SER
22
1_555
A
MG
1001
C
MG
MG
1_555
A
ACP
500
D
O1B
ACP
1_555
98.3
A
SER
22
A
OG
SER
22
1_555
A
MG
1001
C
MG
MG
1_555
A
ACP
500
D
O2G
ACP
1_555
170.7
A
ACP
500
D
O1B
ACP
1_555
A
MG
1001
C
MG
MG
1_555
A
ACP
500
D
O2G
ACP
1_555
90.9
A
SER
22
A
OG
SER
22
1_555
A
MG
1001
C
MG
MG
1_555
A
HOH
1023
G
O
HOH
1_555
78.4
A
ACP
500
D
O1B
ACP
1_555
A
MG
1001
C
MG
MG
1_555
A
HOH
1023
G
O
HOH
1_555
123.3
A
ACP
500
D
O2G
ACP
1_555
A
MG
1001
C
MG
MG
1_555
A
HOH
1023
G
O
HOH
1_555
97.9
B
SER
22
B
OG
SER
22
1_555
B
MG
1002
E
MG
MG
1_555
B
ACP
501
F
O2G
ACP
1_555
118.3
B
SER
22
B
OG
SER
22
1_555
B
MG
1002
E
MG
MG
1_555
B
ACP
501
F
O1B
ACP
1_555
85.4
B
ACP
501
F
O2G
ACP
1_555
B
MG
1002
E
MG
MG
1_555
B
ACP
501
F
O1B
ACP
1_555
58.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
35
A
N
ALA
35
A
O
LEU
84
A
O
LEU
84
A
O
SER
83
A
O
SER
83
A
N
TYR
11
A
N
TYR
11
A
N
VAL
12
A
N
VAL
12
A
O
SER
106
A
O
SER
106
A
N
TYR
109
A
N
TYR
109
A
O
LEU
152
A
O
LEU
152
B
N
ALA
35
B
N
ALA
35
B
O
LEU
84
B
O
LEU
84
B
O
SER
83
B
O
SER
83
B
N
TYR
11
B
N
TYR
11
B
N
MET
14
B
N
MET
14
B
O
LEU
110
B
O
LEU
110
B
N
TYR
109
B
N
TYR
109
B
O
VAL
154
B
O
VAL
154
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
GLY
174
A
GLY
174
1
Y
1
A
LYS
175
A
LYS
175
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
SER
2
B
SER
2
1
Y
1
B
GLY
174
B
GLY
174
1
Y
1
B
LYS
175
B
LYS
175
1
Y
1
B
B
OE2
O
GLU
HOH
55
1018
1.87
1
B
B
O
O
ALA
HOH
123
1009
1.97
1
A
A
NE2
O
GLN
HOH
67
1030
2.03
1
A
A
NH2
O
ARG
HOH
78
1033
2.04
1
B
B
OE2
NE2
GLU
GLN
27
31
2.04
1
A
A
OD1
OH
ASP
TYR
59
94
2.07
1
B
B
N
O
PHE
HOH
128
1033
2.12
1
B
B
NH1
O
ARG
HOH
46
1022
2.17
1
A
A
O
O
HOH
HOH
1007
1008
2.18
1
A
A
O
OG
GLY
SER
162
166
2.19
1
6.05
0.90
118.30
124.35
A
A
A
CB
CG
OD2
ASP
ASP
ASP
7
7
7
N
1
6.36
0.90
118.30
124.66
A
A
A
CB
CG
OD2
ASP
ASP
ASP
59
59
59
N
1
5.68
0.90
118.30
123.98
A
A
A
CB
CG
OD2
ASP
ASP
ASP
60
60
60
N
1
-3.60
0.50
120.30
116.70
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
62
62
62
N
1
7.01
0.90
118.30
125.31
A
A
A
CB
CG
OD2
ASP
ASP
ASP
150
150
150
N
1
6.25
0.90
118.30
124.55
B
B
B
CB
CG
OD2
ASP
ASP
ASP
38
38
38
N
1
9.26
0.90
118.30
127.56
B
B
B
CB
CG
OD2
ASP
ASP
ASP
40
40
40
N
1
6.64
0.90
118.30
124.94
B
B
B
CB
CG
OD2
ASP
ASP
ASP
59
59
59
N
1
6.37
0.90
118.30
124.67
B
B
B
CB
CG
OD2
ASP
ASP
ASP
150
150
150
N
1
5.81
0.90
118.30
124.11
B
B
B
CB
CG
OD2
ASP
ASP
ASP
155
155
155
N
1
A
B
CA
O
GLN
HOH
142
1019
0.69
1_555
2_546
1
A
B
C
O
GLN
HOH
142
1019
1.34
1_555
2_546
1
A
B
N
O
GLN
HOH
142
1019
1.81
1_555
2_546
1
A
B
O
O
HOH
HOH
1022
1020
1.81
1_555
2_545
1
A
B
N
O
GLU
HOH
143
1019
1.95
1_555
2_546
1
A
B
CE
O
LYS
HOH
125
1020
2.06
1_555
2_545
1
A
B
CB
O
GLN
HOH
142
1019
2.10
1_555
2_546
1
A
B
NZ
O
LYS
HOH
125
1020
2.16
1_555
2_545
1
A
ARG
45
-32.54
-32.06
1
A
CYS
87
178.25
118.51
1
A
ASN
102
-101.10
69.09
1
A
ASN
104
-94.19
40.91
1
A
LEU
110
-67.05
82.39
1
A
GLN
142
-118.73
72.64
1
A
GLU
143
-27.78
115.81
1
A
PRO
144
-46.30
105.70
1
A
ASP
157
-67.85
71.95
1
B
ASN
5
-67.89
88.15
1
B
HIS
6
-64.73
29.95
1
B
VAL
16
-51.97
177.60
1
B
ARG
45
-37.50
-36.74
1
B
CYS
87
-164.44
107.69
1
B
ALA
89
22.46
70.66
1
B
LEU
160
-21.38
-57.15
58.105
5.09
0.00
2.52
1.97
0.00
-5.69
0.920
0.878
0.3147200
0.2516600
0.2547100
2.80
25.00
575
10542
5.2
97.88
20.208
0.443
RANDOM
1
THROUGHOUT
0.435
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.80
25.00
67
2825
64
0
2694
0.020
0.021
2812
2.164
1.976
3814
4.349
3.000
340
18.527
15.000
506
0.120
0.200
432
0.008
0.020
2090
0.299
0.300
1398
0.259
0.500
211
0.526
0.300
90
0.586
0.500
17
0.835
1.500
1700
1.504
2.000
2738
2.433
3.000
1112
3.775
4.500
1076
0.4510000
0.4290000
2.671
30
598
20
58.1
2.8
49.39
1KOF
9047
9047
0
0
0.1100000
1
4.5
4.1
99.7
2.8
2.95
99.7
phasing
AMoRE
refinement
REFMAC
5.0
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
Crystal structure of gluconate kinase
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
The biological assembly is a dimer
A
GLY
20
A
GLY
20
HELX_P
A
HIS
33
A
HIS
33
1
1
14
A
ASP
40
A
ASP
40
HELX_P
A
HIS
43
A
HIS
43
5
2
4
A
PRO
44
A
PRO
44
HELX_P
A
SER
53
A
SER
53
1
3
10
A
ARG
62
A
ARG
62
HELX_P
A
GLN
77
A
GLN
77
1
4
16
A
LYS
91
A
LYS
91
HELX_P
A
GLU
100
A
GLU
100
1
5
10
A
ASP
113
A
ASP
113
HELX_P
A
ARG
124
A
ARG
124
1
6
12
A
LYS
130
A
LYS
130
HELX_P
A
LEU
141
A
LEU
141
1
7
12
A
PRO
159
A
PRO
159
HELX_P
A
LYS
173
A
LYS
173
1
8
15
B
GLY
20
B
GLY
20
HELX_P
B
HIS
33
B
HIS
33
1
9
14
B
ASP
40
B
ASP
40
HELX_P
B
HIS
43
B
HIS
43
5
10
4
B
PRO
44
B
PRO
44
HELX_P
B
SER
53
B
SER
53
1
11
10
B
ARG
62
B
ARG
62
HELX_P
B
GLN
77
B
GLN
77
1
12
16
B
LYS
91
B
LYS
91
HELX_P
B
GLU
100
B
GLU
100
1
13
10
B
ASP
113
B
ASP
113
HELX_P
B
ALA
123
B
ALA
123
1
14
11
B
LYS
130
B
LYS
130
HELX_P
B
LEU
141
B
LEU
141
1
15
12
B
PRO
159
B
PRO
159
HELX_P
B
LYS
173
B
LYS
173
1
16
15
metalc
2.785
A
SER
22
A
OG
SER
22
1_555
A
MG
1001
C
MG
MG
1_555
metalc
2.629
A
ACP
500
D
O1B
ACP
1_555
A
MG
1001
C
MG
MG
1_555
metalc
2.213
A
ACP
500
D
O2G
ACP
1_555
A
MG
1001
C
MG
MG
1_555
metalc
2.253
A
MG
1001
C
MG
MG
1_555
A
HOH
1023
G
O
HOH
1_555
metalc
2.164
B
SER
22
B
OG
SER
22
1_555
B
MG
1002
E
MG
MG
1_555
metalc
2.237
B
ACP
501
F
O2G
ACP
1_555
B
MG
1002
E
MG
MG
1_555
metalc
2.436
B
ACP
501
F
O1B
ACP
1_555
B
MG
1002
E
MG
MG
1_555
TRANSFERASE
alfa/beta, TRANSFERASE
GNTK_ECOLI
UNP
1
P46859
MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTN
KVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
EGVVASTIEVIKKGK
0
174
1KOF
1
175
P46859
A
1
1
175
0
174
1KOF
1
175
P46859
B
1
1
175
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
ALA
35
A
ALA
35
A
ASP
38
A
ASP
38
A
VAL
82
A
VAL
82
A
VAL
86
A
VAL
86
A
HIS
9
A
HIS
9
A
MET
14
A
MET
14
A
LEU
105
A
LEU
105
A
LYS
111
A
LYS
111
A
VAL
151
A
VAL
151
A
ASP
155
A
ASP
155
B
ALA
35
B
ALA
35
B
ASP
38
B
ASP
38
B
VAL
82
B
VAL
82
B
VAL
86
B
VAL
86
B
HIS
9
B
HIS
9
B
MET
14
B
MET
14
B
LEU
105
B
LEU
105
B
LYS
111
B
LYS
111
B
VAL
151
B
VAL
151
B
ASP
155
B
ASP
155
BINDING SITE FOR RESIDUE MG A 1001
A
MG
1001
Software
3
BINDING SITE FOR RESIDUE MG B 1002
B
MG
1002
Software
2
BINDING SITE FOR RESIDUE ACP A 500
A
ACP
500
Software
14
BINDING SITE FOR RESIDUE ACP B 501
B
ACP
501
Software
13
A
SER
22
A
SER
22
3
1_555
A
ACP
500
D
ACP
3
1_555
A
HOH
1023
G
HOH
3
1_555
B
SER
22
B
SER
22
2
1_555
B
ACP
501
F
ACP
2
1_555
A
VAL
16
A
VAL
16
14
1_555
A
SER
17
A
SER
17
14
1_555
A
GLY
18
A
GLY
18
14
1_555
A
SER
19
A
SER
19
14
1_555
A
GLY
20
A
GLY
20
14
1_555
A
LYS
21
A
LYS
21
14
1_555
A
SER
22
A
SER
22
14
1_555
A
ALA
23
A
ALA
23
14
1_555
A
ARG
120
A
ARG
120
14
1_555
A
GLN
158
A
GLN
158
14
1_555
A
PRO
159
A
PRO
159
14
1_555
A
LEU
160
A
LEU
160
14
1_555
A
VAL
163
A
VAL
163
14
1_555
A
MG
1001
C
MG
14
1_555
B
SER
17
B
SER
17
13
1_555
B
GLY
18
B
GLY
18
13
1_555
B
GLY
20
B
GLY
20
13
1_555
B
LYS
21
B
LYS
21
13
1_555
B
SER
22
B
SER
22
13
1_555
B
ALA
23
B
ALA
23
13
1_555
B
ARG
120
B
ARG
120
13
1_555
B
ARG
124
B
ARG
124
13
1_555
B
GLN
158
B
GLN
158
13
1_555
B
PRO
159
B
PRO
159
13
1_555
B
LEU
160
B
LEU
160
13
1_555
B
VAL
163
B
VAL
163
13
1_555
B
MG
1002
E
MG
13
1_555
4
P 1 21 1