1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Koshlap, K.M.
Guenther, R.
Sochacka, E.
Malkiewicz, A.
Agris, P.F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H15 N2 O9 P
338.208
n
5-METHYLURIDINE 5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C9 H15 N3 O8 P 1
324.204
n
N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
N
1
N
N
N
2
N
C
N
3
N
N
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
N
8
N
O
N
9
N
O
N
10
R
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
R
C
N
15
N
O
N
16
N
O
N
17
N
C
N
18
N
O
N
19
N
P
N
20
N
O
N
21
N
O
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
O
N
39
N
P
N
40
N
O
N
41
N
O
N
42
N
O
N
43
N
C
N
44
R
C
N
45
N
O
N
46
S
C
N
47
N
O
N
48
R
C
N
49
N
O
N
50
R
C
Y
51
N
N
Y
52
N
C
Y
53
N
N
Y
54
N
C
Y
55
N
C
N
56
N
N
Y
57
N
N
Y
58
N
C
Y
59
N
N
Y
60
N
C
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
O
N
76
N
P
N
77
N
O
N
78
N
O
N
79
N
O
N
80
N
C
N
81
R
C
N
82
N
O
N
83
S
C
N
84
N
O
N
85
R
C
N
86
N
O
N
87
R
C
N
88
N
N
N
89
N
C
N
90
N
O
N
91
N
N
N
92
N
C
N
93
N
N
N
94
N
C
N
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
R
C
N
121
N
O
N
122
R
C
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
N
N
127
N
C
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
O
N
147
N
P
N
148
N
O
N
149
N
O
N
150
N
O
N
151
N
C
N
152
R
C
N
153
N
O
N
154
S
C
N
155
N
O
N
156
R
C
N
157
N
O
N
158
R
C
Y
159
N
N
Y
160
N
C
Y
161
N
N
Y
162
N
C
N
163
N
C
N
164
N
O
N
165
N
N
N
166
N
C
N
167
N
N
N
168
N
N
Y
169
N
C
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
O
N
185
N
P
N
186
N
O
N
187
N
O
N
188
N
O
N
189
N
C
N
190
R
C
N
191
N
O
N
192
S
C
N
193
N
O
N
194
R
C
N
195
N
O
N
196
R
C
N
197
N
N
N
198
N
C
N
199
N
O
N
200
N
N
N
201
N
C
N
202
N
O
N
203
N
C
N
204
N
C
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
doub
N
10
N
sing
N
11
N
doub
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
doub
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
Y
63
N
sing
Y
64
N
sing
Y
65
N
doub
N
66
N
sing
Y
67
N
sing
Y
68
N
sing
Y
69
N
doub
N
70
N
sing
Y
71
N
doub
N
72
N
sing
N
73
N
sing
Y
74
N
sing
Y
75
N
doub
N
76
N
sing
Y
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
Y
175
N
sing
Y
176
N
sing
Y
177
N
doub
N
178
N
sing
Y
179
N
sing
N
180
N
sing
Y
181
N
doub
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
38
8647
8656
10.1021/bi990118w
10393540
A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.
1999
US
Biopolymers
BIPMAA
0161
0006-3525
46
329
10.1002/(SICI)1097-0282(19981015)46:5<329::AID-BIP4>3.3.CO;2-K
Small Structural Ensembles for a 17-Nucleotide Mimic of the tRNA Tpsic-Loop Via Fitting Dipolar Relaxation Rates with the Quadratic Programming Algorithm
1998
NE
J.Biomol.NMR
JBNME9
0800
0925-2738
3
229
10.1023/A:1018618606857
The Dynamic NMR Structure of the T Psi C-Loop: Implications for the Specificity of tRNA Methylation
1997
US
Biochemistry
BICHAW
0033
0006-2960
25
4868
Restrained Refinement of the Monoclinic Form of Yeast Phenylalanine Transfer RNA. Temperature Factors and Dynamics, Coordinated Waters, and Base-Pair Propeller Twist Angles
1986
10.2210/pdb1kos/pdb
pdb_00001kos
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
C60 IS PROTONATED
5395.255
5'-R(*CP*UP*GP*UP*GP*(5MU)P*UP*CP*GP*AP*UP*(CH)P*CP*AP*CP*AP*G)- 3'
TPSIC DOMAIN OF TRNA
+C49C
1
syn
polymer
no
yes
CUGUG(5MU)UCGAU(CH)CACAG
CUGUGUUCGAUCCACAG
A
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
15.586
1
19
A
1
A
17
-5.280
A_C1:G17_A
1
-3.804
-0.830
-1.826
-1.016
4.621
1
20
A
2
A
16
-8.627
A_U2:A16_A
2
-4.443
0.110
-0.081
-0.289
-7.816
1
19
A
3
A
15
4.010
A_G3:C15_A
3
-22.945
0.795
-0.349
-0.354
-2.906
1
20
A
4
A
14
-9.928
A_U4:A14_A
4
-9.380
0.645
0.008
-0.356
-7.884
1
19
A
5
A
13
2.490
A_G5:C13_A
5
-14.092
0.658
0.015
-0.189
3.421
38.593
A
A
1
2
26.876
A
A
17
16
4.090
17.021
-0.583
-0.676
AA_C1U2:A16G17_AA
1
-9.010
14.226
33.605
-3.618
-0.493
2.259
36.343
A
A
2
3
36.343
A
A
16
15
3.195
21.296
-0.485
-0.652
AA_U2G3:C15A16_AA
2
-1.251
2.136
29.596
-3.799
0.615
2.457
30.785
A
A
3
4
22.072
A
A
15
14
2.771
11.448
-0.427
-0.344
AA_G3U4:A14C15_AA
3
-0.124
0.238
28.624
-2.505
0.785
3.810
52.717
A
A
4
5
-31.333
A
A
14
13
3.774
-26.627
1.901
-0.625
AA_U4G5:C13A14_AA
4
6.640
-7.813
45.454
1.479
-1.597
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
1999-10-22
1
1
2008-04-26
1
2
2011-07-13
1
3
2022-02-23
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
BNL
Y
NDB
1999-05-03
REL
REL
SEQUENCE FROM YEAST (SACCHAROMYCES CEREVISIAE) TRNA PHE
sample
EXPERIMENTS IN 100% D2O CONDUCTED AT 283, 288,293, AND 298 KELVIN; EXPERIMENTS IN 6% D2O/ 94% H2O CONDUCTED AT 274 AND 283 KELVIN.
LOWEST ENERGY STRUCTURES
50
8
NOESY
DQF-COSY
TOCSY
HSQC
HETCOR
HETEROTOCSY
HETEROTOCSY-NOESY
DQ
6.0
298
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE
DISTANCE GEOMETRY AND SIMULATED ANNEALING
100% D2O, 94% WATER/6% D2O
BRUNGER
refinement
X-PLOR
3.851
structure solution
X-PLOR
500
Bruker
DRX500
C
1
n
1
C
1
A
U
2
n
2
U
2
A
G
3
n
3
G
3
A
U
4
n
4
U
4
A
G
5
n
5
G
5
A
5MU
6
n
6
5MU
6
A
U
7
n
7
U
7
A
C
8
n
8
C
8
A
G
9
n
9
G
9
A
A
10
n
10
A
10
A
U
11
n
11
U
11
A
CH
12
n
12
CH
12
A
C
13
n
13
C
13
A
A
14
n
14
A
14
A
C
15
n
15
C
15
A
A
16
n
16
A
16
A
G
17
n
17
G
17
A
author_defined_assembly
1
monomeric
A
5MU
6
5-METHYLURIDINE 5'-MONOPHOSPHATE
A
5MU
6
U
A
CH
12
N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE
A
CH
12
C
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
3
A
C2'
C
8
PLANAR
1
A
A
HO2'
O4'
C
A
15
16
1.57
1
A
A
O4
H61
U
A
2
16
1.59
2
A
A
O2'
H2'
G
5MU
5
6
1.52
3
A
A
HO2'
O4'
C
A
15
16
1.57
4
A
A
HO2'
O4'
C
A
15
16
1.43
4
A
A
O2'
H5''
5MU
U
6
7
1.53
5
A
A
O2'
H2'
G
5MU
5
6
1.48
5
A
A
O4
H61
U
A
2
16
1.58
6
A
A
HO2'
O4'
C
A
15
16
1.52
6
A
A
O2'
H2'
G
5MU
5
6
1.55
7
A
A
H21
O2
G
C
5
13
1.50
7
A
A
HO2'
O4'
C
A
15
16
1.56
7
A
A
O2'
H2'
G
5MU
5
6
1.56
7
A
A
O4
H61
U
A
2
16
1.56
8
A
A
HO2'
O4'
C
A
15
16
1.38
8
A
A
O2'
H2'
G
5MU
5
6
1.48
1
-7.33
0.70
109.70
102.37
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
1
8.02
0.80
101.50
109.52
A
A
A
C3'
C2'
C1'
C
C
C
1
1
1
N
1
-6.15
1.00
105.80
99.65
A
A
A
O4'
C1'
C2'
C
C
C
1
1
1
N
1
-10.39
1.10
112.00
101.61
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
1
14.88
0.70
108.50
123.38
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
1
4.46
0.70
118.00
122.46
A
A
A
N3
C4
N4
C
C
C
1
1
1
N
1
9.63
1.20
119.70
129.33
A
A
A
C3'
O3'
P
C
C
U
1
1
2
Y
1
8.92
0.80
101.50
110.42
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
1
-12.55
1.10
112.00
99.45
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
1
5.73
0.70
108.50
114.23
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
1
-4.01
0.50
104.30
100.29
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
1
5.31
0.50
113.10
118.41
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
1
7.37
1.20
119.70
127.07
A
A
A
C3'
O3'
P
G
G
U
3
3
4
Y
1
4.89
0.70
108.50
113.39
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
1
7.75
0.90
109.80
117.55
A
A
A
C5'
C4'
O4'
G
G
G
5
5
5
N
1
6.10
0.80
101.50
107.60
A
A
A
C3'
C2'
C1'
G
G
G
5
5
5
N
1
-4.11
0.50
104.30
100.19
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
1
5.70
0.50
113.10
118.80
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
1
13.67
0.90
109.80
123.47
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
1
-7.12
1.00
102.60
95.48
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
1
5.36
0.80
101.50
106.86
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
1
4.56
0.70
108.50
113.06
A
A
A
O4'
C1'
N1
C
C
C
8
8
8
N
1
3.40
0.50
113.10
116.50
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
1
4.28
0.70
108.50
112.78
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
1
9.29
0.70
108.50
117.79
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
1
7.48
0.90
109.80
117.28
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
1
-11.04
1.00
105.80
94.76
A
A
A
O4'
C1'
C2'
C
C
C
13
13
13
N
1
7.37
0.90
109.80
117.17
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
1
11.94
1.60
113.70
125.64
A
A
A
C2'
C3'
O3'
A
A
A
14
14
14
N
1
3.09
0.50
113.80
116.89
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
1
7.95
0.80
101.50
109.45
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
1
-6.72
1.10
112.00
105.28
A
A
A
N1
C1'
C2'
C
C
C
15
15
15
N
1
5.11
0.70
118.00
123.11
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
1
-4.89
0.70
120.20
115.31
A
A
A
C5
C4
N4
C
C
C
15
15
15
N
1
9.41
1.20
119.70
129.11
A
A
A
C3'
O3'
P
C
C
A
15
15
16
Y
1
-4.45
0.70
109.70
105.25
A
A
A
C1'
O4'
C4'
A
A
A
16
16
16
N
1
6.85
0.80
101.50
108.35
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
1
-9.72
1.10
112.00
102.28
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
1
12.98
0.70
108.50
121.48
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
1
-5.80
0.70
109.70
103.90
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
1
-18.37
1.10
112.00
93.63
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
1
-3.81
0.50
104.30
100.49
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
1
3.01
0.50
113.10
116.11
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
2
-4.76
0.70
109.70
104.94
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
2
10.17
1.60
113.70
123.87
A
A
A
C2'
C3'
O3'
C
C
C
1
1
1
N
2
-6.48
1.00
102.60
96.12
A
A
A
C4'
C3'
C2'
C
C
C
1
1
1
N
2
-9.28
1.00
105.80
96.52
A
A
A
O4'
C1'
C2'
C
C
C
1
1
1
N
2
11.94
0.70
108.50
120.44
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
2
11.31
1.60
120.90
132.21
A
A
A
P
O5'
C5'
U
U
U
2
2
2
N
2
5.44
0.90
109.80
115.24
A
A
A
C5'
C4'
O4'
U
U
U
2
2
2
N
2
8.83
0.80
101.50
110.33
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
2
-12.54
1.10
112.00
99.46
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
2
4.66
0.70
108.50
113.16
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
2
-4.12
0.50
104.30
100.18
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
2
5.55
0.50
113.10
118.65
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
2
7.29
1.20
119.70
126.99
A
A
A
C3'
O3'
P
G
G
U
3
3
4
Y
2
4.67
0.70
108.50
113.17
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
2
-9.51
1.10
112.00
102.49
A
A
A
N9
C1'
C2'
G
G
G
5
5
5
N
2
-4.20
0.50
104.30
100.10
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
2
5.36
0.50
113.10
118.46
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
2
10.01
0.90
109.80
119.81
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
2
-7.74
1.00
102.60
94.86
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
2
7.89
1.20
119.70
127.59
A
A
A
C3'
O3'
P
C
C
G
8
8
9
Y
2
3.46
0.50
113.10
116.56
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
2
7.20
1.20
119.70
126.90
A
A
A
C3'
O3'
P
G
G
A
9
9
10
Y
2
4.71
0.70
108.50
113.21
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
2
10.65
0.70
108.50
119.15
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
2
13.70
0.90
109.80
123.50
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
2
7.26
0.90
109.80
117.06
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
2
3.06
0.50
113.80
116.86
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
2
6.96
0.80
101.50
108.46
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
2
-7.74
1.10
112.00
104.26
A
A
A
N1
C1'
C2'
C
C
C
15
15
15
N
2
4.95
0.70
108.50
113.45
A
A
A
O4'
C1'
N1
C
C
C
15
15
15
N
2
4.77
0.70
118.00
122.77
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
2
8.94
1.20
119.70
128.64
A
A
A
C3'
O3'
P
C
C
A
15
15
16
Y
2
-4.45
0.70
109.70
105.25
A
A
A
C1'
O4'
C4'
A
A
A
16
16
16
N
2
5.94
0.80
101.50
107.44
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
2
-11.30
1.10
112.00
100.70
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
2
15.63
0.70
108.50
124.13
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
2
10.17
1.60
120.90
131.07
A
A
A
P
O5'
C5'
G
G
G
17
17
17
N
2
-7.73
0.70
109.70
101.97
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
2
-15.49
1.10
112.00
96.51
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
2
-4.42
0.50
104.30
99.88
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
2
3.60
0.50
113.10
116.70
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
3
-5.14
0.70
109.70
104.56
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
3
7.98
0.80
101.50
109.48
A
A
A
C3'
C2'
C1'
C
C
C
1
1
1
N
3
-10.17
1.10
112.00
101.83
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
3
11.02
0.70
108.50
119.52
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
3
4.41
0.70
118.00
122.41
A
A
A
N3
C4
N4
C
C
C
1
1
1
N
3
8.07
1.20
119.70
127.77
A
A
A
C3'
O3'
P
C
C
U
1
1
2
Y
3
9.00
0.80
101.50
110.50
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
3
-12.50
1.10
112.00
99.50
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
3
6.50
0.70
108.50
115.00
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
3
-3.97
0.50
104.30
100.33
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
3
5.31
0.50
113.10
118.41
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
3
6.65
0.70
108.50
115.15
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
3
11.02
1.20
119.70
130.72
A
A
A
C3'
O3'
P
U
U
G
4
4
5
Y
3
5.23
0.80
101.50
106.73
A
A
A
C3'
C2'
C1'
G
G
G
5
5
5
N
3
-4.05
0.50
104.30
100.25
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
3
5.21
0.50
113.10
118.31
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
3
9.59
0.90
109.80
119.39
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
3
-7.03
1.00
102.60
95.57
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
3
-9.16
1.10
112.00
102.84
A
A
A
N1
C1'
C2'
U
U
U
7
7
7
N
3
8.24
0.80
101.50
109.74
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
3
3.51
0.50
113.10
116.61
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
3
8.46
1.20
119.70
128.16
A
A
A
C3'
O3'
P
G
G
A
9
9
10
Y
3
6.42
0.70
108.50
114.92
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
3
9.37
0.70
108.50
117.87
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
3
12.24
0.90
109.80
122.04
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
3
9.68
1.60
113.70
123.38
A
A
A
C2'
C3'
O3'
C
C
C
13
13
13
N
3
7.14
0.90
109.80
116.94
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
3
10.48
1.60
113.70
124.18
A
A
A
C2'
C3'
O3'
A
A
A
14
14
14
N
3
3.21
0.50
113.80
117.01
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
3
7.28
0.80
101.50
108.78
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
3
-8.98
1.10
112.00
103.02
A
A
A
N1
C1'
C2'
C
C
C
15
15
15
N
3
6.19
0.70
108.50
114.69
A
A
A
O4'
C1'
N1
C
C
C
15
15
15
N
3
5.09
0.70
118.00
123.09
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
3
-4.56
0.70
120.20
115.64
A
A
A
C5
C4
N4
C
C
C
15
15
15
N
3
8.46
1.20
119.70
128.16
A
A
A
C3'
O3'
P
C
C
A
15
15
16
Y
3
5.96
0.80
101.50
107.46
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
3
-7.14
1.00
105.80
98.66
A
A
A
O4'
C1'
C2'
A
A
A
16
16
16
N
3
-9.60
1.10
112.00
102.40
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
3
8.45
0.70
108.50
116.95
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
3
-4.60
0.70
109.70
105.10
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
3
-17.85
1.10
112.00
94.15
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
3
-3.94
0.50
104.30
100.36
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
3
3.50
0.50
113.10
116.60
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
4
-6.80
0.70
109.70
102.90
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
4
7.54
0.80
101.50
109.04
A
A
A
C3'
C2'
C1'
C
C
C
1
1
1
N
4
-9.50
1.10
112.00
102.50
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
4
11.35
0.70
108.50
119.85
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
4
4.85
0.70
118.00
122.85
A
A
A
N3
C4
N4
C
C
C
1
1
1
N
4
-4.81
0.70
120.20
115.39
A
A
A
C5
C4
N4
C
C
C
1
1
1
N
4
8.58
0.80
101.50
110.08
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
4
-12.11
1.10
112.00
99.89
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
4
5.54
0.70
108.50
114.04
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
4
-4.16
0.50
104.30
100.14
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
4
5.39
0.50
113.10
118.49
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
4
7.48
1.20
119.70
127.18
A
A
A
C3'
O3'
P
G
G
U
3
3
4
Y
4
4.90
0.70
108.50
113.40
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
4
5.17
0.80
101.50
106.67
A
A
A
C3'
C2'
C1'
G
G
G
5
5
5
N
4
-6.71
1.10
112.00
105.29
A
A
A
N9
C1'
C2'
G
G
G
5
5
5
N
4
-4.39
0.50
104.30
99.91
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
4
5.78
0.50
113.10
118.88
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
4
11.22
0.90
109.80
121.02
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
4
-7.17
1.00
102.60
95.43
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
4
5.06
0.80
101.50
106.56
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
4
4.90
0.70
108.50
113.40
A
A
A
O4'
C1'
N1
C
C
C
8
8
8
N
4
7.54
1.20
119.70
127.24
A
A
A
C3'
O3'
P
C
C
G
8
8
9
Y
4
3.51
0.50
113.10
116.61
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
4
8.63
1.20
119.70
128.33
A
A
A
C3'
O3'
P
A
A
U
10
10
11
Y
4
9.37
0.70
108.50
117.87
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
4
14.19
0.90
109.80
123.99
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
4
13.42
1.60
113.70
127.12
A
A
A
C2'
C3'
O3'
C
C
C
13
13
13
N
4
-6.23
1.00
102.60
96.37
A
A
A
C4'
C3'
C2'
C
C
C
13
13
13
N
4
-7.32
1.10
112.00
104.68
A
A
A
N1
C1'
C2'
C
C
C
13
13
13
N
4
5.44
0.90
109.80
115.24
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
4
10.88
1.60
113.70
124.58
A
A
A
C2'
C3'
O3'
A
A
A
14
14
14
N
4
5.12
0.80
101.50
106.62
A
A
A
C3'
C2'
C1'
A
A
A
14
14
14
N
4
3.43
0.50
113.80
117.23
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
4
8.45
0.80
101.50
109.95
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
4
4.38
0.70
108.50
112.88
A
A
A
O4'
C1'
N1
C
C
C
15
15
15
N
4
4.99
0.70
118.00
122.99
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
4
-4.44
0.70
120.20
115.76
A
A
A
C5
C4
N4
C
C
C
15
15
15
N
4
8.18
0.80
101.50
109.68
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
4
-13.63
1.10
112.00
98.37
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
4
13.48
0.70
108.50
121.98
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
4
-7.80
0.70
109.70
101.90
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
4
-15.53
1.10
112.00
96.47
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
4
-4.39
0.50
104.30
99.91
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
4
4.07
0.50
113.10
117.17
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
5
-6.32
0.70
109.70
103.38
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
5
8.13
0.80
101.50
109.63
A
A
A
C3'
C2'
C1'
C
C
C
1
1
1
N
5
-9.62
1.10
112.00
102.38
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
5
13.19
0.70
108.50
121.69
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
5
10.03
1.20
119.70
129.73
A
A
A
C3'
O3'
P
C
C
U
1
1
2
Y
5
9.04
1.20
119.70
128.74
A
A
A
C3'
O3'
P
U
U
G
2
2
3
Y
5
6.81
0.80
101.50
108.31
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
5
-11.63
1.10
112.00
100.37
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
5
-4.09
0.50
104.30
100.21
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
5
4.79
0.50
113.10
117.89
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
5
4.41
0.70
119.90
124.31
A
A
A
N3
C2
N2
G
G
G
3
3
3
N
5
-6.31
1.00
105.80
99.49
A
A
A
O4'
C1'
C2'
U
U
U
4
4
4
N
5
10.73
0.70
108.50
119.23
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
5
-8.29
1.10
112.00
103.71
A
A
A
N9
C1'
C2'
G
G
G
5
5
5
N
5
-4.01
0.50
104.30
100.29
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
5
5.14
0.50
113.10
118.24
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
5
8.28
1.30
126.50
134.78
A
A
A
C4
N9
C1'
G
G
G
5
5
5
N
5
10.77
0.90
109.80
120.57
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
5
-7.11
1.00
102.60
95.49
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
5
6.25
0.80
101.50
107.75
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
5
4.34
0.70
108.50
112.84
A
A
A
O4'
C1'
N1
C
C
C
8
8
8
N
5
7.33
1.20
119.70
127.03
A
A
A
C3'
O3'
P
C
C
G
8
8
9
Y
5
3.66
0.50
113.10
116.76
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
5
7.87
1.20
119.70
127.57
A
A
A
C3'
O3'
P
G
G
A
9
9
10
Y
5
5.43
0.70
108.50
113.93
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
5
8.94
0.70
108.50
117.44
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
5
9.91
1.60
120.90
130.81
A
A
A
P
O5'
C5'
C
C
C
13
13
13
N
5
6.96
0.90
109.80
116.76
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
5
-4.57
0.70
109.70
105.13
A
A
A
C1'
O4'
C4'
C
C
C
13
13
13
N
5
-12.49
1.00
105.80
93.31
A
A
A
O4'
C1'
C2'
C
C
C
13
13
13
N
5
8.93
1.20
119.70
128.63
A
A
A
C3'
O3'
P
C
C
A
13
13
14
Y
5
5.71
0.90
109.80
115.51
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
5
11.78
1.60
113.70
125.48
A
A
A
C2'
C3'
O3'
A
A
A
14
14
14
N
5
3.23
0.50
113.80
117.03
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
5
8.13
0.80
101.50
109.63
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
5
4.77
0.70
118.00
122.77
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
5
-4.44
0.70
120.20
115.76
A
A
A
C5
C4
N4
C
C
C
15
15
15
N
5
9.12
1.20
119.70
128.82
A
A
A
C3'
O3'
P
C
C
A
15
15
16
Y
5
6.32
0.80
101.50
107.82
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
5
-9.88
1.10
112.00
102.12
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
5
11.69
0.70
108.50
120.19
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
5
-4.59
0.70
109.70
105.11
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
5
-18.34
1.10
112.00
93.66
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
5
-4.02
0.50
104.30
100.28
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
5
3.41
0.50
113.10
116.51
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
6
-6.22
0.70
109.70
103.48
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
6
8.38
0.80
101.50
109.88
A
A
A
C3'
C2'
C1'
C
C
C
1
1
1
N
6
-6.34
1.00
105.80
99.46
A
A
A
O4'
C1'
C2'
C
C
C
1
1
1
N
6
-10.59
1.10
112.00
101.41
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
6
13.46
0.70
108.50
121.96
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
6
10.17
1.20
119.70
129.87
A
A
A
C3'
O3'
P
C
C
U
1
1
2
Y
6
-4.89
0.70
109.70
104.81
A
A
A
C1'
O4'
C4'
U
U
U
2
2
2
N
6
5.01
0.70
108.50
113.51
A
A
A
O4'
C1'
N1
U
U
U
2
2
2
N
6
6.72
0.90
109.80
116.52
A
A
A
C5'
C4'
O4'
G
G
G
3
3
3
N
6
-7.19
0.70
109.70
102.51
A
A
A
C1'
O4'
C4'
G
G
G
3
3
3
N
6
8.44
0.80
101.50
109.94
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
6
-11.88
1.10
112.00
100.12
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
6
10.18
0.70
108.50
118.68
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
6
-4.03
0.50
104.30
100.27
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
6
5.43
0.50
113.10
118.53
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
6
8.02
1.20
119.70
127.72
A
A
A
C3'
O3'
P
G
G
U
3
3
4
Y
6
6.90
0.70
108.50
115.40
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
6
10.68
1.20
119.70
130.38
A
A
A
C3'
O3'
P
U
U
G
4
4
5
Y
6
-9.89
1.10
112.00
102.11
A
A
A
N9
C1'
C2'
G
G
G
5
5
5
N
6
-4.23
0.50
104.30
100.07
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
6
5.16
0.50
113.10
118.26
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
6
7.31
1.20
119.70
127.01
A
A
A
C3'
O3'
P
5MU
5MU
U
6
6
7
Y
6
8.79
0.90
109.80
118.59
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
6
-7.33
1.00
102.60
95.27
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
6
5.42
0.80
101.50
106.92
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
6
3.29
0.50
113.10
116.39
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
6
5.95
0.70
108.50
114.45
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
6
9.58
0.70
108.50
118.08
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
6
12.52
0.90
109.80
122.32
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
6
6.10
0.80
101.50
107.60
A
A
A
C3'
C2'
C1'
A
A
A
14
14
14
N
6
-7.61
1.10
112.00
104.39
A
A
A
N9
C1'
C2'
A
A
A
14
14
14
N
6
3.99
0.50
113.80
117.79
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
6
7.52
0.80
101.50
109.02
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
6
-7.10
1.10
112.00
104.90
A
A
A
N1
C1'
C2'
C
C
C
15
15
15
N
6
5.55
0.70
108.50
114.05
A
A
A
O4'
C1'
N1
C
C
C
15
15
15
N
6
8.69
1.20
119.70
128.39
A
A
A
C3'
O3'
P
C
C
A
15
15
16
Y
6
5.47
0.80
101.50
106.97
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
6
-7.23
1.00
105.80
98.57
A
A
A
O4'
C1'
C2'
A
A
A
16
16
16
N
6
-9.82
1.10
112.00
102.18
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
6
8.15
0.70
108.50
116.65
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
6
-20.72
1.10
112.00
91.28
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
6
6.70
0.70
108.50
115.20
A
A
A
O4'
C1'
N9
G
G
G
17
17
17
N
6
-3.79
0.50
104.30
100.51
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
6
3.41
0.50
113.10
116.51
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
7
-5.72
0.70
109.70
103.98
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
7
-7.92
1.10
112.00
104.08
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
7
11.99
0.70
108.50
120.49
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
7
4.70
0.70
118.00
122.70
A
A
A
N3
C4
N4
C
C
C
1
1
1
N
7
-4.33
0.70
120.20
115.87
A
A
A
C5
C4
N4
C
C
C
1
1
1
N
7
7.35
1.20
119.70
127.05
A
A
A
C3'
O3'
P
C
C
U
1
1
2
Y
7
6.53
0.90
109.80
116.33
A
A
A
C5'
C4'
O4'
U
U
U
2
2
2
N
7
-6.93
1.00
105.80
98.87
A
A
A
O4'
C1'
C2'
U
U
U
2
2
2
N
7
5.46
0.70
108.50
113.96
A
A
A
O4'
C1'
N1
U
U
U
2
2
2
N
7
8.79
0.80
101.50
110.29
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
7
-13.23
1.10
112.00
98.77
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
7
5.00
0.70
108.50
113.50
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
7
-4.13
0.50
104.30
100.17
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
7
5.40
0.50
113.10
118.50
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
7
7.41
1.20
119.70
127.11
A
A
A
C3'
O3'
P
G
G
U
3
3
4
Y
7
4.87
0.80
101.50
106.37
A
A
A
C3'
C2'
C1'
U
U
U
4
4
4
N
7
5.15
0.70
108.50
113.65
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
7
8.37
1.20
119.70
128.07
A
A
A
C3'
O3'
P
U
U
G
4
4
5
Y
7
12.35
1.60
113.70
126.05
A
A
A
C2'
C3'
O3'
G
G
G
5
5
5
N
7
6.24
1.00
102.60
108.84
A
A
A
C4'
C3'
C2'
G
G
G
5
5
5
N
7
-7.01
1.10
112.00
104.99
A
A
A
N9
C1'
C2'
G
G
G
5
5
5
N
7
-4.40
0.50
104.30
99.90
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
7
5.26
0.50
113.10
118.36
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
7
8.94
1.20
119.70
128.64
A
A
A
C3'
O3'
P
G
G
5MU
5
5
6
Y
7
7.57
1.20
119.70
127.27
A
A
A
C3'
O3'
P
5MU
5MU
U
6
6
7
Y
7
12.57
0.90
109.80
122.37
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
7
-8.40
1.00
102.60
94.20
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
7
6.19
0.80
101.50
107.69
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
7
4.99
0.70
108.50
113.49
A
A
A
O4'
C1'
N1
C
C
C
8
8
8
N
7
3.62
0.50
113.10
116.72
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
7
4.50
0.70
108.50
113.00
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
7
10.06
0.70
108.50
118.56
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
7
7.51
1.20
119.70
127.21
A
A
A
C3'
O3'
P
CH
CH
C
12
12
13
Y
7
7.12
0.90
109.80
116.92
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
7
9.65
1.20
119.70
129.35
A
A
A
C3'
O3'
P
C
C
A
13
13
14
Y
7
9.68
0.90
109.80
119.48
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
7
14.09
1.60
113.70
127.79
A
A
A
C2'
C3'
O3'
A
A
A
14
14
14
N
7
7.92
0.80
101.50
109.42
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
7
-7.98
1.10
112.00
104.02
A
A
A
N1
C1'
C2'
C
C
C
15
15
15
N
7
5.37
0.70
118.00
123.37
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
7
-4.88
0.70
120.20
115.32
A
A
A
C5
C4
N4
C
C
C
15
15
15
N
7
8.96
1.20
119.70
128.66
A
A
A
C3'
O3'
P
C
C
A
15
15
16
Y
7
6.83
0.80
101.50
108.33
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
7
-7.03
1.00
105.80
98.77
A
A
A
O4'
C1'
C2'
A
A
A
16
16
16
N
7
-9.70
1.10
112.00
102.30
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
7
9.98
0.70
108.50
118.48
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
7
-5.41
0.70
109.70
104.29
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
7
-17.97
1.10
112.00
94.03
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
7
-4.05
0.50
104.30
100.25
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
7
3.43
0.50
113.10
116.53
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
8
-7.00
0.70
109.70
102.70
A
A
A
C1'
O4'
C4'
C
C
C
1
1
1
N
8
8.23
0.80
101.50
109.73
A
A
A
C3'
C2'
C1'
C
C
C
1
1
1
N
8
-6.49
1.00
105.80
99.31
A
A
A
O4'
C1'
C2'
C
C
C
1
1
1
N
8
-11.22
1.10
112.00
100.78
A
A
A
N1
C1'
C2'
C
C
C
1
1
1
N
8
15.23
0.70
108.50
123.73
A
A
A
O4'
C1'
N1
C
C
C
1
1
1
N
8
4.52
0.70
118.00
122.52
A
A
A
N3
C4
N4
C
C
C
1
1
1
N
8
10.35
1.20
119.70
130.05
A
A
A
C3'
O3'
P
C
C
U
1
1
2
Y
8
5.57
0.90
109.80
115.37
A
A
A
C5'
C4'
O4'
U
U
U
2
2
2
N
8
-4.38
0.70
109.70
105.32
A
A
A
C1'
O4'
C4'
U
U
U
2
2
2
N
8
5.27
0.70
108.50
113.77
A
A
A
O4'
C1'
N1
U
U
U
2
2
2
N
8
-5.74
0.70
109.70
103.96
A
A
A
C1'
O4'
C4'
G
G
G
3
3
3
N
8
8.93
0.80
101.50
110.43
A
A
A
C3'
C2'
C1'
G
G
G
3
3
3
N
8
-11.19
1.10
112.00
100.81
A
A
A
N9
C1'
C2'
G
G
G
3
3
3
N
8
8.01
0.70
108.50
116.51
A
A
A
O4'
C1'
N9
G
G
G
3
3
3
N
8
-4.01
0.50
104.30
100.29
A
A
A
C5
N7
C8
G
G
G
3
3
3
N
8
5.45
0.50
113.10
118.55
A
A
A
N7
C8
N9
G
G
G
3
3
3
N
8
8.06
1.20
119.70
127.76
A
A
A
C3'
O3'
P
G
G
U
3
3
4
Y
8
7.92
0.70
108.50
116.42
A
A
A
O4'
C1'
N1
U
U
U
4
4
4
N
8
10.51
1.20
119.70
130.21
A
A
A
C3'
O3'
P
U
U
G
4
4
5
Y
8
10.79
1.60
113.70
124.49
A
A
A
C2'
C3'
O3'
G
G
G
5
5
5
N
8
-10.03
1.10
112.00
101.97
A
A
A
N9
C1'
C2'
G
G
G
5
5
5
N
8
-4.40
0.50
104.30
99.90
A
A
A
C5
N7
C8
G
G
G
5
5
5
N
8
5.26
0.50
113.10
118.36
A
A
A
N7
C8
N9
G
G
G
5
5
5
N
8
10.14
1.20
119.70
129.84
A
A
A
C3'
O3'
P
G
G
5MU
5
5
6
Y
8
10.65
0.90
109.80
120.45
A
A
A
C5'
C4'
O4'
U
U
U
7
7
7
N
8
-7.76
1.00
102.60
94.84
A
A
A
C4'
C3'
C2'
U
U
U
7
7
7
N
8
5.22
0.80
101.50
106.72
A
A
A
C3'
C2'
C1'
C
C
C
8
8
8
N
8
5.85
0.70
108.50
114.35
A
A
A
O4'
C1'
N1
C
C
C
8
8
8
N
8
3.54
0.50
113.10
116.64
A
A
A
N7
C8
N9
G
G
G
9
9
9
N
8
5.83
0.70
108.50
114.33
A
A
A
O4'
C1'
N9
A
A
A
10
10
10
N
8
-6.16
0.70
109.70
103.54
A
A
A
C1'
O4'
C4'
U
U
U
11
11
11
N
8
7.05
0.70
108.50
115.55
A
A
A
O4'
C1'
N1
U
U
U
11
11
11
N
8
11.84
0.90
109.80
121.64
A
A
A
C5'
C4'
O4'
C
C
C
13
13
13
N
8
10.74
1.60
113.70
124.44
A
A
A
C2'
C3'
O3'
C
C
C
13
13
13
N
8
-7.31
1.10
112.00
104.69
A
A
A
N1
C1'
C2'
C
C
C
13
13
13
N
8
7.79
0.90
109.80
117.59
A
A
A
C5'
C4'
O4'
A
A
A
14
14
14
N
8
5.69
0.80
101.50
107.19
A
A
A
C3'
C2'
C1'
A
A
A
14
14
14
N
8
-8.19
1.10
112.00
103.81
A
A
A
N9
C1'
C2'
A
A
A
14
14
14
N
8
-3.34
0.50
103.90
100.56
A
A
A
C5
N7
C8
A
A
A
14
14
14
N
8
4.42
0.50
113.80
118.22
A
A
A
N7
C8
N9
A
A
A
14
14
14
N
8
4.09
0.60
118.60
122.69
A
A
A
N1
C6
N6
A
A
A
14
14
14
N
8
8.90
0.80
101.50
110.40
A
A
A
C3'
C2'
C1'
C
C
C
15
15
15
N
8
-7.22
1.10
112.00
104.78
A
A
A
N1
C1'
C2'
C
C
C
15
15
15
N
8
6.31
0.70
108.50
114.81
A
A
A
O4'
C1'
N1
C
C
C
15
15
15
N
8
4.35
0.70
118.00
122.35
A
A
A
N3
C4
N4
C
C
C
15
15
15
N
8
-4.53
0.70
109.70
105.17
A
A
A
C1'
O4'
C4'
A
A
A
16
16
16
N
8
6.77
0.80
101.50
108.27
A
A
A
C3'
C2'
C1'
A
A
A
16
16
16
N
8
-6.73
1.00
105.80
99.07
A
A
A
O4'
C1'
C2'
A
A
A
16
16
16
N
8
-8.29
1.10
112.00
103.71
A
A
A
N9
C1'
C2'
A
A
A
16
16
16
N
8
9.43
0.70
108.50
117.93
A
A
A
O4'
C1'
N9
A
A
A
16
16
16
N
8
-5.59
0.70
109.70
104.11
A
A
A
C1'
O4'
C4'
G
G
G
17
17
17
N
8
-17.77
1.10
112.00
94.23
A
A
A
N9
C1'
C2'
G
G
G
17
17
17
N
8
-4.12
0.50
104.30
100.18
A
A
A
C5
N7
C8
G
G
G
17
17
17
N
8
3.42
0.50
113.10
116.52
A
A
A
N7
C8
N9
G
G
G
17
17
17
N
1
A
A
C2'
C1'
C
C
1
1
-0.059
0.008
1.526
1.467
N
1
A
A
C2'
C1'
G
G
3
3
-0.051
0.008
1.526
1.475
N
1
A
A
C8
N9
G
G
3
3
-0.056
0.007
1.374
1.318
N
1
A
A
C2'
C1'
G
G
5
5
-0.065
0.008
1.526
1.461
N
1
A
A
C8
N9
G
G
5
5
-0.071
0.007
1.374
1.303
N
1
A
A
N1
C6
C
C
13
13
-0.040
0.006
1.367
1.327
N
1
A
A
C8
N9
G
G
17
17
-0.046
0.007
1.374
1.328
N
2
A
A
C2'
C1'
C
C
1
1
-0.050
0.008
1.526
1.476
N
2
A
A
C2'
C1'
G
G
3
3
-0.051
0.008
1.526
1.475
N
2
A
A
C8
N9
G
G
3
3
-0.055
0.007
1.374
1.319
N
2
A
A
C2'
C1'
G
G
5
5
-0.066
0.008
1.526
1.460
N
2
A
A
C8
N9
G
G
5
5
-0.080
0.007
1.374
1.294
N
2
A
A
C3'
C2'
C
C
8
8
-0.068
0.011
1.523
1.455
N
2
A
A
N1
C6
C
C
15
15
-0.041
0.006
1.367
1.326
N
2
A
A
C8
N9
G
G
17
17
-0.056
0.007
1.374
1.318
N
2
A
A
N9
C4
G
G
17
17
-0.057
0.008
1.375
1.318
N
3
A
A
C2'
C1'
C
C
1
1
-0.056
0.008
1.526
1.470
N
3
A
A
C2'
C1'
G
G
3
3
-0.050
0.008
1.526
1.476
N
3
A
A
C8
N9
G
G
3
3
-0.058
0.007
1.374
1.316
N
3
A
A
C2'
C1'
G
G
5
5
-0.056
0.008
1.526
1.470
N
3
A
A
C8
N9
G
G
5
5
-0.069
0.007
1.374
1.305
N
3
A
A
C8
N9
G
G
17
17
-0.049
0.007
1.374
1.325
N
4
A
A
C2'
C1'
C
C
1
1
-0.056
0.008
1.526
1.470
N
4
A
A
C2'
C1'
G
G
3
3
-0.054
0.008
1.526
1.472
N
4
A
A
C8
N9
G
G
3
3
-0.058
0.007
1.374
1.316
N
4
A
A
C2'
C1'
G
G
5
5
-0.052
0.008
1.526
1.474
N
4
A
A
C8
N9
G
G
5
5
-0.074
0.007
1.374
1.300
N
4
A
A
C8
N9
G
G
17
17
-0.058
0.007
1.374
1.316
N
5
A
A
C2'
C1'
C
C
1
1
-0.064
0.008
1.526
1.462
N
5
A
A
C2'
C1'
G
G
3
3
-0.064
0.008
1.526
1.462
N
5
A
A
C8
N9
G
G
3
3
-0.054
0.007
1.374
1.320
N
5
A
A
C2'
C1'
G
G
5
5
-0.058
0.008
1.526
1.468
N
5
A
A
C8
N9
G
G
5
5
-0.077
0.007
1.374
1.297
N
5
A
A
N1
C6
C
C
15
15
-0.039
0.006
1.367
1.328
N
5
A
A
C8
N9
G
G
17
17
-0.049
0.007
1.374
1.325
N
6
A
A
C2'
C1'
C
C
1
1
-0.067
0.008
1.526
1.459
N
6
A
A
C8
N9
G
G
3
3
-0.061
0.007
1.374
1.313
N
6
A
A
C2'
C1'
G
G
5
5
-0.059
0.008
1.526
1.467
N
6
A
A
C8
N9
G
G
5
5
-0.078
0.007
1.374
1.296
N
6
A
A
C8
N9
G
G
17
17
-0.043
0.007
1.374
1.331
N
7
A
A
C2'
C1'
C
C
1
1
-0.069
0.008
1.526
1.457
N
7
A
A
C2'
C1'
G
G
3
3
-0.050
0.008
1.526
1.476
N
7
A
A
C8
N9
G
G
3
3
-0.054
0.007
1.374
1.320
N
7
A
A
C8
N9
G
G
5
5
-0.078
0.007
1.374
1.296
N
7
A
A
C3'
C2'
C
C
8
8
-0.068
0.011
1.523
1.455
N
7
A
A
N1
C6
C
C
13
13
-0.041
0.006
1.367
1.326
N
7
A
A
N1
C6
C
C
15
15
-0.036
0.006
1.367
1.331
N
7
A
A
C8
N9
G
G
17
17
-0.048
0.007
1.374
1.326
N
8
A
A
C2'
C1'
C
C
1
1
-0.061
0.008
1.526
1.465
N
8
A
A
C8
N9
G
G
3
3
-0.059
0.007
1.374
1.315
N
8
A
A
C2'
C1'
G
G
5
5
-0.048
0.008
1.526
1.478
N
8
A
A
C8
N9
G
G
5
5
-0.079
0.007
1.374
1.295
N
8
A
A
C8
N9
G
G
17
17
-0.049
0.007
1.374
1.325
N
SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION
1
N
N
covale
1.608
both
A
G
5
A
O3'
G
5
1_555
A
5MU
6
A
P
5MU
6
1_555
covale
1.632
both
A
5MU
6
A
O3'
5MU
6
1_555
A
U
7
A
P
U
7
1_555
covale
1.613
both
A
U
11
A
O3'
U
11
1_555
A
CH
12
A
P
CH
12
1_555
covale
1.615
both
A
CH
12
A
O3'
CH
12
1_555
A
C
13
A
P
C
13
1_555
hydrog
WATSON-CRICK
A
C
1
A
N3
C
1
1_555
A
G
17
A
N1
G
17
1_555
hydrog
WATSON-CRICK
A
C
1
A
N4
C
1
1_555
A
G
17
A
O6
G
17
1_555
hydrog
WATSON-CRICK
A
C
1
A
O2
C
1
1_555
A
G
17
A
N2
G
17
1_555
hydrog
WATSON-CRICK
A
U
2
A
N3
U
2
1_555
A
A
16
A
N1
A
16
1_555
hydrog
WATSON-CRICK
A
U
2
A
O4
U
2
1_555
A
A
16
A
N6
A
16
1_555
hydrog
G-CH PAIR
A
G
3
A
N7
G
3
1_555
A
CH
12
A
N4
CH
12
1_555
hydrog
WATSON-CRICK
A
G
3
A
N1
G
3
1_555
A
C
15
A
N3
C
15
1_555
hydrog
WATSON-CRICK
A
G
3
A
N2
G
3
1_555
A
C
15
A
O2
C
15
1_555
hydrog
WATSON-CRICK
A
G
3
A
O6
G
3
1_555
A
C
15
A
N4
C
15
1_555
hydrog
WATSON-CRICK
A
U
4
A
N3
U
4
1_555
A
A
14
A
N1
A
14
1_555
hydrog
WATSON-CRICK
A
U
4
A
O4
U
4
1_555
A
A
14
A
N6
A
14
1_555
hydrog
WATSON-CRICK
A
G
5
A
N1
G
5
1_555
A
C
13
A
N3
C
13
1_555
hydrog
WATSON-CRICK
A
G
5
A
N2
G
5
1_555
A
C
13
A
O2
C
13
1_555
hydrog
WATSON-CRICK
A
G
5
A
O6
G
5
1_555
A
C
13
A
N4
C
13
1_555
RNA
TRNA, T STEM LOOP, TRNA DOMAIN, RNA HAIRPIN, RNA FOLDING, RNA
1KOS
PDB
1
1KOS
1
17
1KOS
1
17
1KOS
A
1
1
17
1
P 1