1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Koshlap, K.M. Guenther, R. Sochacka, E. Malkiewicz, A. Agris, P.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H15 N2 O9 P 338.208 n 5-METHYLURIDINE 5'-MONOPHOSPHATE RNA linking C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C9 H15 N3 O8 P 1 324.204 n N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N C N 8 N O N 9 N O N 10 R C N 11 R C N 12 N O N 13 S C N 14 R C N 15 N O N 16 N O N 17 N C N 18 N O N 19 N P N 20 N O N 21 N O N 22 N O N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C Y 51 N N Y 52 N C Y 53 N N Y 54 N C Y 55 N C N 56 N N Y 57 N N Y 58 N C Y 59 N N Y 60 N C N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N O N 76 N P N 77 N O N 78 N O N 79 N O N 80 N C N 81 R C N 82 N O N 83 S C N 84 N O N 85 R C N 86 N O N 87 R C N 88 N N N 89 N C N 90 N O N 91 N N N 92 N C N 93 N N N 94 N C N 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 R C N 121 N O N 122 R C N 123 N N N 124 N C N 125 N O N 126 N N N 127 N C N 128 N N N 129 N C N 130 N C N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N O N 147 N P N 148 N O N 149 N O N 150 N O N 151 N C N 152 R C N 153 N O N 154 S C N 155 N O N 156 R C N 157 N O N 158 R C Y 159 N N Y 160 N C Y 161 N N Y 162 N C N 163 N C N 164 N O N 165 N N N 166 N C N 167 N N N 168 N N Y 169 N C N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N O N 185 N P N 186 N O N 187 N O N 188 N O N 189 N C N 190 R C N 191 N O N 192 S C N 193 N O N 194 R C N 195 N O N 196 R C N 197 N N N 198 N C N 199 N O N 200 N N N 201 N C N 202 N O N 203 N C N 204 N C N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N doub N 10 N sing N 11 N doub N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing Y 63 N sing Y 64 N sing Y 65 N doub N 66 N sing Y 67 N sing Y 68 N sing Y 69 N doub N 70 N sing Y 71 N doub N 72 N sing N 73 N sing Y 74 N sing Y 75 N doub N 76 N sing Y 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing Y 175 N sing Y 176 N sing Y 177 N doub N 178 N sing Y 179 N sing N 180 N sing Y 181 N doub N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N doub N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N doub N 222 N sing N 223 N doub N 224 N sing N 225 N sing US Biochemistry BICHAW 0033 0006-2960 38 8647 8656 10.1021/bi990118w 10393540 A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain. 1999 US Biopolymers BIPMAA 0161 0006-3525 46 329 10.1002/(SICI)1097-0282(19981015)46:5<329::AID-BIP4>3.3.CO;2-K Small Structural Ensembles for a 17-Nucleotide Mimic of the tRNA Tpsic-Loop Via Fitting Dipolar Relaxation Rates with the Quadratic Programming Algorithm 1998 NE J.Biomol.NMR JBNME9 0800 0925-2738 3 229 10.1023/A:1018618606857 The Dynamic NMR Structure of the T Psi C-Loop: Implications for the Specificity of tRNA Methylation 1997 US Biochemistry BICHAW 0033 0006-2960 25 4868 Restrained Refinement of the Monoclinic Form of Yeast Phenylalanine Transfer RNA. Temperature Factors and Dynamics, Coordinated Waters, and Base-Pair Propeller Twist Angles 1986 10.2210/pdb1kos/pdb pdb_00001kos 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 C60 IS PROTONATED 5395.255 5'-R(*CP*UP*GP*UP*GP*(5MU)P*UP*CP*GP*AP*UP*(CH)P*CP*AP*CP*AP*G)- 3' TPSIC DOMAIN OF TRNA +C49C 1 syn polymer no yes CUGUG(5MU)UCGAU(CH)CACAG CUGUGUUCGAUCCACAG A polyribonucleotide n n n n n n n n n n n n n n n n n 15.586 1 19 A 1 A 17 -5.280 A_C1:G17_A 1 -3.804 -0.830 -1.826 -1.016 4.621 1 20 A 2 A 16 -8.627 A_U2:A16_A 2 -4.443 0.110 -0.081 -0.289 -7.816 1 19 A 3 A 15 4.010 A_G3:C15_A 3 -22.945 0.795 -0.349 -0.354 -2.906 1 20 A 4 A 14 -9.928 A_U4:A14_A 4 -9.380 0.645 0.008 -0.356 -7.884 1 19 A 5 A 13 2.490 A_G5:C13_A 5 -14.092 0.658 0.015 -0.189 3.421 38.593 A A 1 2 26.876 A A 17 16 4.090 17.021 -0.583 -0.676 AA_C1U2:A16G17_AA 1 -9.010 14.226 33.605 -3.618 -0.493 2.259 36.343 A A 2 3 36.343 A A 16 15 3.195 21.296 -0.485 -0.652 AA_U2G3:C15A16_AA 2 -1.251 2.136 29.596 -3.799 0.615 2.457 30.785 A A 3 4 22.072 A A 15 14 2.771 11.448 -0.427 -0.344 AA_G3U4:A14C15_AA 3 -0.124 0.238 28.624 -2.505 0.785 3.810 52.717 A A 4 5 -31.333 A A 14 13 3.774 -26.627 1.901 -0.625 AA_U4G5:C13A14_AA 4 6.640 -7.813 45.454 1.479 -1.597 database_2 pdbx_struct_assembly pdbx_struct_oper_list struct_conn chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 1999-10-22 1 1 2008-04-26 1 2 2011-07-13 1 3 2022-02-23 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag BNL Y NDB 1999-05-03 REL REL SEQUENCE FROM YEAST (SACCHAROMYCES CEREVISIAE) TRNA PHE sample EXPERIMENTS IN 100% D2O CONDUCTED AT 283, 288,293, AND 298 KELVIN; EXPERIMENTS IN 6% D2O/ 94% H2O CONDUCTED AT 274 AND 283 KELVIN. LOWEST ENERGY STRUCTURES 50 8 NOESY DQF-COSY TOCSY HSQC HETCOR HETEROTOCSY HETEROTOCSY-NOESY DQ 6.0 298 K REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE DISTANCE GEOMETRY AND SIMULATED ANNEALING 100% D2O, 94% WATER/6% D2O BRUNGER refinement X-PLOR 3.851 structure solution X-PLOR 500 Bruker DRX500 C 1 n 1 C 1 A U 2 n 2 U 2 A G 3 n 3 G 3 A U 4 n 4 U 4 A G 5 n 5 G 5 A 5MU 6 n 6 5MU 6 A U 7 n 7 U 7 A C 8 n 8 C 8 A G 9 n 9 G 9 A A 10 n 10 A 10 A U 11 n 11 U 11 A CH 12 n 12 CH 12 A C 13 n 13 C 13 A A 14 n 14 A 14 A C 15 n 15 C 15 A A 16 n 16 A 16 A G 17 n 17 G 17 A author_defined_assembly 1 monomeric A 5MU 6 5-METHYLURIDINE 5'-MONOPHOSPHATE A 5MU 6 U A CH 12 N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE A CH 12 C 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 3 A C2' C 8 PLANAR 1 A A HO2' O4' C A 15 16 1.57 1 A A O4 H61 U A 2 16 1.59 2 A A O2' H2' G 5MU 5 6 1.52 3 A A HO2' O4' C A 15 16 1.57 4 A A HO2' O4' C A 15 16 1.43 4 A A O2' H5'' 5MU U 6 7 1.53 5 A A O2' H2' G 5MU 5 6 1.48 5 A A O4 H61 U A 2 16 1.58 6 A A HO2' O4' C A 15 16 1.52 6 A A O2' H2' G 5MU 5 6 1.55 7 A A H21 O2 G C 5 13 1.50 7 A A HO2' O4' C A 15 16 1.56 7 A A O2' H2' G 5MU 5 6 1.56 7 A A O4 H61 U A 2 16 1.56 8 A A HO2' O4' C A 15 16 1.38 8 A A O2' H2' G 5MU 5 6 1.48 1 -7.33 0.70 109.70 102.37 A A A C1' O4' C4' C C C 1 1 1 N 1 8.02 0.80 101.50 109.52 A A A C3' C2' C1' C C C 1 1 1 N 1 -6.15 1.00 105.80 99.65 A A A O4' C1' C2' C C C 1 1 1 N 1 -10.39 1.10 112.00 101.61 A A A N1 C1' C2' C C C 1 1 1 N 1 14.88 0.70 108.50 123.38 A A A O4' C1' N1 C C C 1 1 1 N 1 4.46 0.70 118.00 122.46 A A A N3 C4 N4 C C C 1 1 1 N 1 9.63 1.20 119.70 129.33 A A A C3' O3' P C C U 1 1 2 Y 1 8.92 0.80 101.50 110.42 A A A C3' C2' C1' G G G 3 3 3 N 1 -12.55 1.10 112.00 99.45 A A A N9 C1' C2' G G G 3 3 3 N 1 5.73 0.70 108.50 114.23 A A A O4' C1' N9 G G G 3 3 3 N 1 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 3 3 3 N 1 5.31 0.50 113.10 118.41 A A A N7 C8 N9 G G G 3 3 3 N 1 7.37 1.20 119.70 127.07 A A A C3' O3' P G G U 3 3 4 Y 1 4.89 0.70 108.50 113.39 A A A O4' C1' N1 U U U 4 4 4 N 1 7.75 0.90 109.80 117.55 A A A C5' C4' O4' G G G 5 5 5 N 1 6.10 0.80 101.50 107.60 A A A C3' C2' C1' G G G 5 5 5 N 1 -4.11 0.50 104.30 100.19 A A A C5 N7 C8 G G G 5 5 5 N 1 5.70 0.50 113.10 118.80 A A A N7 C8 N9 G G G 5 5 5 N 1 13.67 0.90 109.80 123.47 A A A C5' C4' O4' U U U 7 7 7 N 1 -7.12 1.00 102.60 95.48 A A A C4' C3' C2' U U U 7 7 7 N 1 5.36 0.80 101.50 106.86 A A A C3' C2' C1' C C C 8 8 8 N 1 4.56 0.70 108.50 113.06 A A A O4' C1' N1 C C C 8 8 8 N 1 3.40 0.50 113.10 116.50 A A A N7 C8 N9 G G G 9 9 9 N 1 4.28 0.70 108.50 112.78 A A A O4' C1' N9 A A A 10 10 10 N 1 9.29 0.70 108.50 117.79 A A A O4' C1' N1 U U U 11 11 11 N 1 7.48 0.90 109.80 117.28 A A A C5' C4' O4' C C C 13 13 13 N 1 -11.04 1.00 105.80 94.76 A A A O4' C1' C2' C C C 13 13 13 N 1 7.37 0.90 109.80 117.17 A A A C5' C4' O4' A A A 14 14 14 N 1 11.94 1.60 113.70 125.64 A A A C2' C3' O3' A A A 14 14 14 N 1 3.09 0.50 113.80 116.89 A A A N7 C8 N9 A A A 14 14 14 N 1 7.95 0.80 101.50 109.45 A A A C3' C2' C1' C C C 15 15 15 N 1 -6.72 1.10 112.00 105.28 A A A N1 C1' C2' C C C 15 15 15 N 1 5.11 0.70 118.00 123.11 A A A N3 C4 N4 C C C 15 15 15 N 1 -4.89 0.70 120.20 115.31 A A A C5 C4 N4 C C C 15 15 15 N 1 9.41 1.20 119.70 129.11 A A A C3' O3' P C C A 15 15 16 Y 1 -4.45 0.70 109.70 105.25 A A A C1' O4' C4' A A A 16 16 16 N 1 6.85 0.80 101.50 108.35 A A A C3' C2' C1' A A A 16 16 16 N 1 -9.72 1.10 112.00 102.28 A A A N9 C1' C2' A A A 16 16 16 N 1 12.98 0.70 108.50 121.48 A A A O4' C1' N9 A A A 16 16 16 N 1 -5.80 0.70 109.70 103.90 A A A C1' O4' C4' G G G 17 17 17 N 1 -18.37 1.10 112.00 93.63 A A A N9 C1' C2' G G G 17 17 17 N 1 -3.81 0.50 104.30 100.49 A A A C5 N7 C8 G G G 17 17 17 N 1 3.01 0.50 113.10 116.11 A A A N7 C8 N9 G G G 17 17 17 N 2 -4.76 0.70 109.70 104.94 A A A C1' O4' C4' C C C 1 1 1 N 2 10.17 1.60 113.70 123.87 A A A C2' C3' O3' C C C 1 1 1 N 2 -6.48 1.00 102.60 96.12 A A A C4' C3' C2' C C C 1 1 1 N 2 -9.28 1.00 105.80 96.52 A A A O4' C1' C2' C C C 1 1 1 N 2 11.94 0.70 108.50 120.44 A A A O4' C1' N1 C C C 1 1 1 N 2 11.31 1.60 120.90 132.21 A A A P O5' C5' U U U 2 2 2 N 2 5.44 0.90 109.80 115.24 A A A C5' C4' O4' U U U 2 2 2 N 2 8.83 0.80 101.50 110.33 A A A C3' C2' C1' G G G 3 3 3 N 2 -12.54 1.10 112.00 99.46 A A A N9 C1' C2' G G G 3 3 3 N 2 4.66 0.70 108.50 113.16 A A A O4' C1' N9 G G G 3 3 3 N 2 -4.12 0.50 104.30 100.18 A A A C5 N7 C8 G G G 3 3 3 N 2 5.55 0.50 113.10 118.65 A A A N7 C8 N9 G G G 3 3 3 N 2 7.29 1.20 119.70 126.99 A A A C3' O3' P G G U 3 3 4 Y 2 4.67 0.70 108.50 113.17 A A A O4' C1' N1 U U U 4 4 4 N 2 -9.51 1.10 112.00 102.49 A A A N9 C1' C2' G G G 5 5 5 N 2 -4.20 0.50 104.30 100.10 A A A C5 N7 C8 G G G 5 5 5 N 2 5.36 0.50 113.10 118.46 A A A N7 C8 N9 G G G 5 5 5 N 2 10.01 0.90 109.80 119.81 A A A C5' C4' O4' U U U 7 7 7 N 2 -7.74 1.00 102.60 94.86 A A A C4' C3' C2' U U U 7 7 7 N 2 7.89 1.20 119.70 127.59 A A A C3' O3' P C C G 8 8 9 Y 2 3.46 0.50 113.10 116.56 A A A N7 C8 N9 G G G 9 9 9 N 2 7.20 1.20 119.70 126.90 A A A C3' O3' P G G A 9 9 10 Y 2 4.71 0.70 108.50 113.21 A A A O4' C1' N9 A A A 10 10 10 N 2 10.65 0.70 108.50 119.15 A A A O4' C1' N1 U U U 11 11 11 N 2 13.70 0.90 109.80 123.50 A A A C5' C4' O4' C C C 13 13 13 N 2 7.26 0.90 109.80 117.06 A A A C5' C4' O4' A A A 14 14 14 N 2 3.06 0.50 113.80 116.86 A A A N7 C8 N9 A A A 14 14 14 N 2 6.96 0.80 101.50 108.46 A A A C3' C2' C1' C C C 15 15 15 N 2 -7.74 1.10 112.00 104.26 A A A N1 C1' C2' C C C 15 15 15 N 2 4.95 0.70 108.50 113.45 A A A O4' C1' N1 C C C 15 15 15 N 2 4.77 0.70 118.00 122.77 A A A N3 C4 N4 C C C 15 15 15 N 2 8.94 1.20 119.70 128.64 A A A C3' O3' P C C A 15 15 16 Y 2 -4.45 0.70 109.70 105.25 A A A C1' O4' C4' A A A 16 16 16 N 2 5.94 0.80 101.50 107.44 A A A C3' C2' C1' A A A 16 16 16 N 2 -11.30 1.10 112.00 100.70 A A A N9 C1' C2' A A A 16 16 16 N 2 15.63 0.70 108.50 124.13 A A A O4' C1' N9 A A A 16 16 16 N 2 10.17 1.60 120.90 131.07 A A A P O5' C5' G G G 17 17 17 N 2 -7.73 0.70 109.70 101.97 A A A C1' O4' C4' G G G 17 17 17 N 2 -15.49 1.10 112.00 96.51 A A A N9 C1' C2' G G G 17 17 17 N 2 -4.42 0.50 104.30 99.88 A A A C5 N7 C8 G G G 17 17 17 N 2 3.60 0.50 113.10 116.70 A A A N7 C8 N9 G G G 17 17 17 N 3 -5.14 0.70 109.70 104.56 A A A C1' O4' C4' C C C 1 1 1 N 3 7.98 0.80 101.50 109.48 A A A C3' C2' C1' C C C 1 1 1 N 3 -10.17 1.10 112.00 101.83 A A A N1 C1' C2' C C C 1 1 1 N 3 11.02 0.70 108.50 119.52 A A A O4' C1' N1 C C C 1 1 1 N 3 4.41 0.70 118.00 122.41 A A A N3 C4 N4 C C C 1 1 1 N 3 8.07 1.20 119.70 127.77 A A A C3' O3' P C C U 1 1 2 Y 3 9.00 0.80 101.50 110.50 A A A C3' C2' C1' G G G 3 3 3 N 3 -12.50 1.10 112.00 99.50 A A A N9 C1' C2' G G G 3 3 3 N 3 6.50 0.70 108.50 115.00 A A A O4' C1' N9 G G G 3 3 3 N 3 -3.97 0.50 104.30 100.33 A A A C5 N7 C8 G G G 3 3 3 N 3 5.31 0.50 113.10 118.41 A A A N7 C8 N9 G G G 3 3 3 N 3 6.65 0.70 108.50 115.15 A A A O4' C1' N1 U U U 4 4 4 N 3 11.02 1.20 119.70 130.72 A A A C3' O3' P U U G 4 4 5 Y 3 5.23 0.80 101.50 106.73 A A A C3' C2' C1' G G G 5 5 5 N 3 -4.05 0.50 104.30 100.25 A A A C5 N7 C8 G G G 5 5 5 N 3 5.21 0.50 113.10 118.31 A A A N7 C8 N9 G G G 5 5 5 N 3 9.59 0.90 109.80 119.39 A A A C5' C4' O4' U U U 7 7 7 N 3 -7.03 1.00 102.60 95.57 A A A C4' C3' C2' U U U 7 7 7 N 3 -9.16 1.10 112.00 102.84 A A A N1 C1' C2' U U U 7 7 7 N 3 8.24 0.80 101.50 109.74 A A A C3' C2' C1' C C C 8 8 8 N 3 3.51 0.50 113.10 116.61 A A A N7 C8 N9 G G G 9 9 9 N 3 8.46 1.20 119.70 128.16 A A A C3' O3' P G G A 9 9 10 Y 3 6.42 0.70 108.50 114.92 A A A O4' C1' N9 A A A 10 10 10 N 3 9.37 0.70 108.50 117.87 A A A O4' C1' N1 U U U 11 11 11 N 3 12.24 0.90 109.80 122.04 A A A C5' C4' O4' C C C 13 13 13 N 3 9.68 1.60 113.70 123.38 A A A C2' C3' O3' C C C 13 13 13 N 3 7.14 0.90 109.80 116.94 A A A C5' C4' O4' A A A 14 14 14 N 3 10.48 1.60 113.70 124.18 A A A C2' C3' O3' A A A 14 14 14 N 3 3.21 0.50 113.80 117.01 A A A N7 C8 N9 A A A 14 14 14 N 3 7.28 0.80 101.50 108.78 A A A C3' C2' C1' C C C 15 15 15 N 3 -8.98 1.10 112.00 103.02 A A A N1 C1' C2' C C C 15 15 15 N 3 6.19 0.70 108.50 114.69 A A A O4' C1' N1 C C C 15 15 15 N 3 5.09 0.70 118.00 123.09 A A A N3 C4 N4 C C C 15 15 15 N 3 -4.56 0.70 120.20 115.64 A A A C5 C4 N4 C C C 15 15 15 N 3 8.46 1.20 119.70 128.16 A A A C3' O3' P C C A 15 15 16 Y 3 5.96 0.80 101.50 107.46 A A A C3' C2' C1' A A A 16 16 16 N 3 -7.14 1.00 105.80 98.66 A A A O4' C1' C2' A A A 16 16 16 N 3 -9.60 1.10 112.00 102.40 A A A N9 C1' C2' A A A 16 16 16 N 3 8.45 0.70 108.50 116.95 A A A O4' C1' N9 A A A 16 16 16 N 3 -4.60 0.70 109.70 105.10 A A A C1' O4' C4' G G G 17 17 17 N 3 -17.85 1.10 112.00 94.15 A A A N9 C1' C2' G G G 17 17 17 N 3 -3.94 0.50 104.30 100.36 A A A C5 N7 C8 G G G 17 17 17 N 3 3.50 0.50 113.10 116.60 A A A N7 C8 N9 G G G 17 17 17 N 4 -6.80 0.70 109.70 102.90 A A A C1' O4' C4' C C C 1 1 1 N 4 7.54 0.80 101.50 109.04 A A A C3' C2' C1' C C C 1 1 1 N 4 -9.50 1.10 112.00 102.50 A A A N1 C1' C2' C C C 1 1 1 N 4 11.35 0.70 108.50 119.85 A A A O4' C1' N1 C C C 1 1 1 N 4 4.85 0.70 118.00 122.85 A A A N3 C4 N4 C C C 1 1 1 N 4 -4.81 0.70 120.20 115.39 A A A C5 C4 N4 C C C 1 1 1 N 4 8.58 0.80 101.50 110.08 A A A C3' C2' C1' G G G 3 3 3 N 4 -12.11 1.10 112.00 99.89 A A A N9 C1' C2' G G G 3 3 3 N 4 5.54 0.70 108.50 114.04 A A A O4' C1' N9 G G G 3 3 3 N 4 -4.16 0.50 104.30 100.14 A A A C5 N7 C8 G G G 3 3 3 N 4 5.39 0.50 113.10 118.49 A A A N7 C8 N9 G G G 3 3 3 N 4 7.48 1.20 119.70 127.18 A A A C3' O3' P G G U 3 3 4 Y 4 4.90 0.70 108.50 113.40 A A A O4' C1' N1 U U U 4 4 4 N 4 5.17 0.80 101.50 106.67 A A A C3' C2' C1' G G G 5 5 5 N 4 -6.71 1.10 112.00 105.29 A A A N9 C1' C2' G G G 5 5 5 N 4 -4.39 0.50 104.30 99.91 A A A C5 N7 C8 G G G 5 5 5 N 4 5.78 0.50 113.10 118.88 A A A N7 C8 N9 G G G 5 5 5 N 4 11.22 0.90 109.80 121.02 A A A C5' C4' O4' U U U 7 7 7 N 4 -7.17 1.00 102.60 95.43 A A A C4' C3' C2' U U U 7 7 7 N 4 5.06 0.80 101.50 106.56 A A A C3' C2' C1' C C C 8 8 8 N 4 4.90 0.70 108.50 113.40 A A A O4' C1' N1 C C C 8 8 8 N 4 7.54 1.20 119.70 127.24 A A A C3' O3' P C C G 8 8 9 Y 4 3.51 0.50 113.10 116.61 A A A N7 C8 N9 G G G 9 9 9 N 4 8.63 1.20 119.70 128.33 A A A C3' O3' P A A U 10 10 11 Y 4 9.37 0.70 108.50 117.87 A A A O4' C1' N1 U U U 11 11 11 N 4 14.19 0.90 109.80 123.99 A A A C5' C4' O4' C C C 13 13 13 N 4 13.42 1.60 113.70 127.12 A A A C2' C3' O3' C C C 13 13 13 N 4 -6.23 1.00 102.60 96.37 A A A C4' C3' C2' C C C 13 13 13 N 4 -7.32 1.10 112.00 104.68 A A A N1 C1' C2' C C C 13 13 13 N 4 5.44 0.90 109.80 115.24 A A A C5' C4' O4' A A A 14 14 14 N 4 10.88 1.60 113.70 124.58 A A A C2' C3' O3' A A A 14 14 14 N 4 5.12 0.80 101.50 106.62 A A A C3' C2' C1' A A A 14 14 14 N 4 3.43 0.50 113.80 117.23 A A A N7 C8 N9 A A A 14 14 14 N 4 8.45 0.80 101.50 109.95 A A A C3' C2' C1' C C C 15 15 15 N 4 4.38 0.70 108.50 112.88 A A A O4' C1' N1 C C C 15 15 15 N 4 4.99 0.70 118.00 122.99 A A A N3 C4 N4 C C C 15 15 15 N 4 -4.44 0.70 120.20 115.76 A A A C5 C4 N4 C C C 15 15 15 N 4 8.18 0.80 101.50 109.68 A A A C3' C2' C1' A A A 16 16 16 N 4 -13.63 1.10 112.00 98.37 A A A N9 C1' C2' A A A 16 16 16 N 4 13.48 0.70 108.50 121.98 A A A O4' C1' N9 A A A 16 16 16 N 4 -7.80 0.70 109.70 101.90 A A A C1' O4' C4' G G G 17 17 17 N 4 -15.53 1.10 112.00 96.47 A A A N9 C1' C2' G G G 17 17 17 N 4 -4.39 0.50 104.30 99.91 A A A C5 N7 C8 G G G 17 17 17 N 4 4.07 0.50 113.10 117.17 A A A N7 C8 N9 G G G 17 17 17 N 5 -6.32 0.70 109.70 103.38 A A A C1' O4' C4' C C C 1 1 1 N 5 8.13 0.80 101.50 109.63 A A A C3' C2' C1' C C C 1 1 1 N 5 -9.62 1.10 112.00 102.38 A A A N1 C1' C2' C C C 1 1 1 N 5 13.19 0.70 108.50 121.69 A A A O4' C1' N1 C C C 1 1 1 N 5 10.03 1.20 119.70 129.73 A A A C3' O3' P C C U 1 1 2 Y 5 9.04 1.20 119.70 128.74 A A A C3' O3' P U U G 2 2 3 Y 5 6.81 0.80 101.50 108.31 A A A C3' C2' C1' G G G 3 3 3 N 5 -11.63 1.10 112.00 100.37 A A A N9 C1' C2' G G G 3 3 3 N 5 -4.09 0.50 104.30 100.21 A A A C5 N7 C8 G G G 3 3 3 N 5 4.79 0.50 113.10 117.89 A A A N7 C8 N9 G G G 3 3 3 N 5 4.41 0.70 119.90 124.31 A A A N3 C2 N2 G G G 3 3 3 N 5 -6.31 1.00 105.80 99.49 A A A O4' C1' C2' U U U 4 4 4 N 5 10.73 0.70 108.50 119.23 A A A O4' C1' N1 U U U 4 4 4 N 5 -8.29 1.10 112.00 103.71 A A A N9 C1' C2' G G G 5 5 5 N 5 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 5 5 5 N 5 5.14 0.50 113.10 118.24 A A A N7 C8 N9 G G G 5 5 5 N 5 8.28 1.30 126.50 134.78 A A A C4 N9 C1' G G G 5 5 5 N 5 10.77 0.90 109.80 120.57 A A A C5' C4' O4' U U U 7 7 7 N 5 -7.11 1.00 102.60 95.49 A A A C4' C3' C2' U U U 7 7 7 N 5 6.25 0.80 101.50 107.75 A A A C3' C2' C1' C C C 8 8 8 N 5 4.34 0.70 108.50 112.84 A A A O4' C1' N1 C C C 8 8 8 N 5 7.33 1.20 119.70 127.03 A A A C3' O3' P C C G 8 8 9 Y 5 3.66 0.50 113.10 116.76 A A A N7 C8 N9 G G G 9 9 9 N 5 7.87 1.20 119.70 127.57 A A A C3' O3' P G G A 9 9 10 Y 5 5.43 0.70 108.50 113.93 A A A O4' C1' N9 A A A 10 10 10 N 5 8.94 0.70 108.50 117.44 A A A O4' C1' N1 U U U 11 11 11 N 5 9.91 1.60 120.90 130.81 A A A P O5' C5' C C C 13 13 13 N 5 6.96 0.90 109.80 116.76 A A A C5' C4' O4' C C C 13 13 13 N 5 -4.57 0.70 109.70 105.13 A A A C1' O4' C4' C C C 13 13 13 N 5 -12.49 1.00 105.80 93.31 A A A O4' C1' C2' C C C 13 13 13 N 5 8.93 1.20 119.70 128.63 A A A C3' O3' P C C A 13 13 14 Y 5 5.71 0.90 109.80 115.51 A A A C5' C4' O4' A A A 14 14 14 N 5 11.78 1.60 113.70 125.48 A A A C2' C3' O3' A A A 14 14 14 N 5 3.23 0.50 113.80 117.03 A A A N7 C8 N9 A A A 14 14 14 N 5 8.13 0.80 101.50 109.63 A A A C3' C2' C1' C C C 15 15 15 N 5 4.77 0.70 118.00 122.77 A A A N3 C4 N4 C C C 15 15 15 N 5 -4.44 0.70 120.20 115.76 A A A C5 C4 N4 C C C 15 15 15 N 5 9.12 1.20 119.70 128.82 A A A C3' O3' P C C A 15 15 16 Y 5 6.32 0.80 101.50 107.82 A A A C3' C2' C1' A A A 16 16 16 N 5 -9.88 1.10 112.00 102.12 A A A N9 C1' C2' A A A 16 16 16 N 5 11.69 0.70 108.50 120.19 A A A O4' C1' N9 A A A 16 16 16 N 5 -4.59 0.70 109.70 105.11 A A A C1' O4' C4' G G G 17 17 17 N 5 -18.34 1.10 112.00 93.66 A A A N9 C1' C2' G G G 17 17 17 N 5 -4.02 0.50 104.30 100.28 A A A C5 N7 C8 G G G 17 17 17 N 5 3.41 0.50 113.10 116.51 A A A N7 C8 N9 G G G 17 17 17 N 6 -6.22 0.70 109.70 103.48 A A A C1' O4' C4' C C C 1 1 1 N 6 8.38 0.80 101.50 109.88 A A A C3' C2' C1' C C C 1 1 1 N 6 -6.34 1.00 105.80 99.46 A A A O4' C1' C2' C C C 1 1 1 N 6 -10.59 1.10 112.00 101.41 A A A N1 C1' C2' C C C 1 1 1 N 6 13.46 0.70 108.50 121.96 A A A O4' C1' N1 C C C 1 1 1 N 6 10.17 1.20 119.70 129.87 A A A C3' O3' P C C U 1 1 2 Y 6 -4.89 0.70 109.70 104.81 A A A C1' O4' C4' U U U 2 2 2 N 6 5.01 0.70 108.50 113.51 A A A O4' C1' N1 U U U 2 2 2 N 6 6.72 0.90 109.80 116.52 A A A C5' C4' O4' G G G 3 3 3 N 6 -7.19 0.70 109.70 102.51 A A A C1' O4' C4' G G G 3 3 3 N 6 8.44 0.80 101.50 109.94 A A A C3' C2' C1' G G G 3 3 3 N 6 -11.88 1.10 112.00 100.12 A A A N9 C1' C2' G G G 3 3 3 N 6 10.18 0.70 108.50 118.68 A A A O4' C1' N9 G G G 3 3 3 N 6 -4.03 0.50 104.30 100.27 A A A C5 N7 C8 G G G 3 3 3 N 6 5.43 0.50 113.10 118.53 A A A N7 C8 N9 G G G 3 3 3 N 6 8.02 1.20 119.70 127.72 A A A C3' O3' P G G U 3 3 4 Y 6 6.90 0.70 108.50 115.40 A A A O4' C1' N1 U U U 4 4 4 N 6 10.68 1.20 119.70 130.38 A A A C3' O3' P U U G 4 4 5 Y 6 -9.89 1.10 112.00 102.11 A A A N9 C1' C2' G G G 5 5 5 N 6 -4.23 0.50 104.30 100.07 A A A C5 N7 C8 G G G 5 5 5 N 6 5.16 0.50 113.10 118.26 A A A N7 C8 N9 G G G 5 5 5 N 6 7.31 1.20 119.70 127.01 A A A C3' O3' P 5MU 5MU U 6 6 7 Y 6 8.79 0.90 109.80 118.59 A A A C5' C4' O4' U U U 7 7 7 N 6 -7.33 1.00 102.60 95.27 A A A C4' C3' C2' U U U 7 7 7 N 6 5.42 0.80 101.50 106.92 A A A C3' C2' C1' C C C 8 8 8 N 6 3.29 0.50 113.10 116.39 A A A N7 C8 N9 G G G 9 9 9 N 6 5.95 0.70 108.50 114.45 A A A O4' C1' N9 A A A 10 10 10 N 6 9.58 0.70 108.50 118.08 A A A O4' C1' N1 U U U 11 11 11 N 6 12.52 0.90 109.80 122.32 A A A C5' C4' O4' C C C 13 13 13 N 6 6.10 0.80 101.50 107.60 A A A C3' C2' C1' A A A 14 14 14 N 6 -7.61 1.10 112.00 104.39 A A A N9 C1' C2' A A A 14 14 14 N 6 3.99 0.50 113.80 117.79 A A A N7 C8 N9 A A A 14 14 14 N 6 7.52 0.80 101.50 109.02 A A A C3' C2' C1' C C C 15 15 15 N 6 -7.10 1.10 112.00 104.90 A A A N1 C1' C2' C C C 15 15 15 N 6 5.55 0.70 108.50 114.05 A A A O4' C1' N1 C C C 15 15 15 N 6 8.69 1.20 119.70 128.39 A A A C3' O3' P C C A 15 15 16 Y 6 5.47 0.80 101.50 106.97 A A A C3' C2' C1' A A A 16 16 16 N 6 -7.23 1.00 105.80 98.57 A A A O4' C1' C2' A A A 16 16 16 N 6 -9.82 1.10 112.00 102.18 A A A N9 C1' C2' A A A 16 16 16 N 6 8.15 0.70 108.50 116.65 A A A O4' C1' N9 A A A 16 16 16 N 6 -20.72 1.10 112.00 91.28 A A A N9 C1' C2' G G G 17 17 17 N 6 6.70 0.70 108.50 115.20 A A A O4' C1' N9 G G G 17 17 17 N 6 -3.79 0.50 104.30 100.51 A A A C5 N7 C8 G G G 17 17 17 N 6 3.41 0.50 113.10 116.51 A A A N7 C8 N9 G G G 17 17 17 N 7 -5.72 0.70 109.70 103.98 A A A C1' O4' C4' C C C 1 1 1 N 7 -7.92 1.10 112.00 104.08 A A A N1 C1' C2' C C C 1 1 1 N 7 11.99 0.70 108.50 120.49 A A A O4' C1' N1 C C C 1 1 1 N 7 4.70 0.70 118.00 122.70 A A A N3 C4 N4 C C C 1 1 1 N 7 -4.33 0.70 120.20 115.87 A A A C5 C4 N4 C C C 1 1 1 N 7 7.35 1.20 119.70 127.05 A A A C3' O3' P C C U 1 1 2 Y 7 6.53 0.90 109.80 116.33 A A A C5' C4' O4' U U U 2 2 2 N 7 -6.93 1.00 105.80 98.87 A A A O4' C1' C2' U U U 2 2 2 N 7 5.46 0.70 108.50 113.96 A A A O4' C1' N1 U U U 2 2 2 N 7 8.79 0.80 101.50 110.29 A A A C3' C2' C1' G G G 3 3 3 N 7 -13.23 1.10 112.00 98.77 A A A N9 C1' C2' G G G 3 3 3 N 7 5.00 0.70 108.50 113.50 A A A O4' C1' N9 G G G 3 3 3 N 7 -4.13 0.50 104.30 100.17 A A A C5 N7 C8 G G G 3 3 3 N 7 5.40 0.50 113.10 118.50 A A A N7 C8 N9 G G G 3 3 3 N 7 7.41 1.20 119.70 127.11 A A A C3' O3' P G G U 3 3 4 Y 7 4.87 0.80 101.50 106.37 A A A C3' C2' C1' U U U 4 4 4 N 7 5.15 0.70 108.50 113.65 A A A O4' C1' N1 U U U 4 4 4 N 7 8.37 1.20 119.70 128.07 A A A C3' O3' P U U G 4 4 5 Y 7 12.35 1.60 113.70 126.05 A A A C2' C3' O3' G G G 5 5 5 N 7 6.24 1.00 102.60 108.84 A A A C4' C3' C2' G G G 5 5 5 N 7 -7.01 1.10 112.00 104.99 A A A N9 C1' C2' G G G 5 5 5 N 7 -4.40 0.50 104.30 99.90 A A A C5 N7 C8 G G G 5 5 5 N 7 5.26 0.50 113.10 118.36 A A A N7 C8 N9 G G G 5 5 5 N 7 8.94 1.20 119.70 128.64 A A A C3' O3' P G G 5MU 5 5 6 Y 7 7.57 1.20 119.70 127.27 A A A C3' O3' P 5MU 5MU U 6 6 7 Y 7 12.57 0.90 109.80 122.37 A A A C5' C4' O4' U U U 7 7 7 N 7 -8.40 1.00 102.60 94.20 A A A C4' C3' C2' U U U 7 7 7 N 7 6.19 0.80 101.50 107.69 A A A C3' C2' C1' C C C 8 8 8 N 7 4.99 0.70 108.50 113.49 A A A O4' C1' N1 C C C 8 8 8 N 7 3.62 0.50 113.10 116.72 A A A N7 C8 N9 G G G 9 9 9 N 7 4.50 0.70 108.50 113.00 A A A O4' C1' N9 A A A 10 10 10 N 7 10.06 0.70 108.50 118.56 A A A O4' C1' N1 U U U 11 11 11 N 7 7.51 1.20 119.70 127.21 A A A C3' O3' P CH CH C 12 12 13 Y 7 7.12 0.90 109.80 116.92 A A A C5' C4' O4' C C C 13 13 13 N 7 9.65 1.20 119.70 129.35 A A A C3' O3' P C C A 13 13 14 Y 7 9.68 0.90 109.80 119.48 A A A C5' C4' O4' A A A 14 14 14 N 7 14.09 1.60 113.70 127.79 A A A C2' C3' O3' A A A 14 14 14 N 7 7.92 0.80 101.50 109.42 A A A C3' C2' C1' C C C 15 15 15 N 7 -7.98 1.10 112.00 104.02 A A A N1 C1' C2' C C C 15 15 15 N 7 5.37 0.70 118.00 123.37 A A A N3 C4 N4 C C C 15 15 15 N 7 -4.88 0.70 120.20 115.32 A A A C5 C4 N4 C C C 15 15 15 N 7 8.96 1.20 119.70 128.66 A A A C3' O3' P C C A 15 15 16 Y 7 6.83 0.80 101.50 108.33 A A A C3' C2' C1' A A A 16 16 16 N 7 -7.03 1.00 105.80 98.77 A A A O4' C1' C2' A A A 16 16 16 N 7 -9.70 1.10 112.00 102.30 A A A N9 C1' C2' A A A 16 16 16 N 7 9.98 0.70 108.50 118.48 A A A O4' C1' N9 A A A 16 16 16 N 7 -5.41 0.70 109.70 104.29 A A A C1' O4' C4' G G G 17 17 17 N 7 -17.97 1.10 112.00 94.03 A A A N9 C1' C2' G G G 17 17 17 N 7 -4.05 0.50 104.30 100.25 A A A C5 N7 C8 G G G 17 17 17 N 7 3.43 0.50 113.10 116.53 A A A N7 C8 N9 G G G 17 17 17 N 8 -7.00 0.70 109.70 102.70 A A A C1' O4' C4' C C C 1 1 1 N 8 8.23 0.80 101.50 109.73 A A A C3' C2' C1' C C C 1 1 1 N 8 -6.49 1.00 105.80 99.31 A A A O4' C1' C2' C C C 1 1 1 N 8 -11.22 1.10 112.00 100.78 A A A N1 C1' C2' C C C 1 1 1 N 8 15.23 0.70 108.50 123.73 A A A O4' C1' N1 C C C 1 1 1 N 8 4.52 0.70 118.00 122.52 A A A N3 C4 N4 C C C 1 1 1 N 8 10.35 1.20 119.70 130.05 A A A C3' O3' P C C U 1 1 2 Y 8 5.57 0.90 109.80 115.37 A A A C5' C4' O4' U U U 2 2 2 N 8 -4.38 0.70 109.70 105.32 A A A C1' O4' C4' U U U 2 2 2 N 8 5.27 0.70 108.50 113.77 A A A O4' C1' N1 U U U 2 2 2 N 8 -5.74 0.70 109.70 103.96 A A A C1' O4' C4' G G G 3 3 3 N 8 8.93 0.80 101.50 110.43 A A A C3' C2' C1' G G G 3 3 3 N 8 -11.19 1.10 112.00 100.81 A A A N9 C1' C2' G G G 3 3 3 N 8 8.01 0.70 108.50 116.51 A A A O4' C1' N9 G G G 3 3 3 N 8 -4.01 0.50 104.30 100.29 A A A C5 N7 C8 G G G 3 3 3 N 8 5.45 0.50 113.10 118.55 A A A N7 C8 N9 G G G 3 3 3 N 8 8.06 1.20 119.70 127.76 A A A C3' O3' P G G U 3 3 4 Y 8 7.92 0.70 108.50 116.42 A A A O4' C1' N1 U U U 4 4 4 N 8 10.51 1.20 119.70 130.21 A A A C3' O3' P U U G 4 4 5 Y 8 10.79 1.60 113.70 124.49 A A A C2' C3' O3' G G G 5 5 5 N 8 -10.03 1.10 112.00 101.97 A A A N9 C1' C2' G G G 5 5 5 N 8 -4.40 0.50 104.30 99.90 A A A C5 N7 C8 G G G 5 5 5 N 8 5.26 0.50 113.10 118.36 A A A N7 C8 N9 G G G 5 5 5 N 8 10.14 1.20 119.70 129.84 A A A C3' O3' P G G 5MU 5 5 6 Y 8 10.65 0.90 109.80 120.45 A A A C5' C4' O4' U U U 7 7 7 N 8 -7.76 1.00 102.60 94.84 A A A C4' C3' C2' U U U 7 7 7 N 8 5.22 0.80 101.50 106.72 A A A C3' C2' C1' C C C 8 8 8 N 8 5.85 0.70 108.50 114.35 A A A O4' C1' N1 C C C 8 8 8 N 8 3.54 0.50 113.10 116.64 A A A N7 C8 N9 G G G 9 9 9 N 8 5.83 0.70 108.50 114.33 A A A O4' C1' N9 A A A 10 10 10 N 8 -6.16 0.70 109.70 103.54 A A A C1' O4' C4' U U U 11 11 11 N 8 7.05 0.70 108.50 115.55 A A A O4' C1' N1 U U U 11 11 11 N 8 11.84 0.90 109.80 121.64 A A A C5' C4' O4' C C C 13 13 13 N 8 10.74 1.60 113.70 124.44 A A A C2' C3' O3' C C C 13 13 13 N 8 -7.31 1.10 112.00 104.69 A A A N1 C1' C2' C C C 13 13 13 N 8 7.79 0.90 109.80 117.59 A A A C5' C4' O4' A A A 14 14 14 N 8 5.69 0.80 101.50 107.19 A A A C3' C2' C1' A A A 14 14 14 N 8 -8.19 1.10 112.00 103.81 A A A N9 C1' C2' A A A 14 14 14 N 8 -3.34 0.50 103.90 100.56 A A A C5 N7 C8 A A A 14 14 14 N 8 4.42 0.50 113.80 118.22 A A A N7 C8 N9 A A A 14 14 14 N 8 4.09 0.60 118.60 122.69 A A A N1 C6 N6 A A A 14 14 14 N 8 8.90 0.80 101.50 110.40 A A A C3' C2' C1' C C C 15 15 15 N 8 -7.22 1.10 112.00 104.78 A A A N1 C1' C2' C C C 15 15 15 N 8 6.31 0.70 108.50 114.81 A A A O4' C1' N1 C C C 15 15 15 N 8 4.35 0.70 118.00 122.35 A A A N3 C4 N4 C C C 15 15 15 N 8 -4.53 0.70 109.70 105.17 A A A C1' O4' C4' A A A 16 16 16 N 8 6.77 0.80 101.50 108.27 A A A C3' C2' C1' A A A 16 16 16 N 8 -6.73 1.00 105.80 99.07 A A A O4' C1' C2' A A A 16 16 16 N 8 -8.29 1.10 112.00 103.71 A A A N9 C1' C2' A A A 16 16 16 N 8 9.43 0.70 108.50 117.93 A A A O4' C1' N9 A A A 16 16 16 N 8 -5.59 0.70 109.70 104.11 A A A C1' O4' C4' G G G 17 17 17 N 8 -17.77 1.10 112.00 94.23 A A A N9 C1' C2' G G G 17 17 17 N 8 -4.12 0.50 104.30 100.18 A A A C5 N7 C8 G G G 17 17 17 N 8 3.42 0.50 113.10 116.52 A A A N7 C8 N9 G G G 17 17 17 N 1 A A C2' C1' C C 1 1 -0.059 0.008 1.526 1.467 N 1 A A C2' C1' G G 3 3 -0.051 0.008 1.526 1.475 N 1 A A C8 N9 G G 3 3 -0.056 0.007 1.374 1.318 N 1 A A C2' C1' G G 5 5 -0.065 0.008 1.526 1.461 N 1 A A C8 N9 G G 5 5 -0.071 0.007 1.374 1.303 N 1 A A N1 C6 C C 13 13 -0.040 0.006 1.367 1.327 N 1 A A C8 N9 G G 17 17 -0.046 0.007 1.374 1.328 N 2 A A C2' C1' C C 1 1 -0.050 0.008 1.526 1.476 N 2 A A C2' C1' G G 3 3 -0.051 0.008 1.526 1.475 N 2 A A C8 N9 G G 3 3 -0.055 0.007 1.374 1.319 N 2 A A C2' C1' G G 5 5 -0.066 0.008 1.526 1.460 N 2 A A C8 N9 G G 5 5 -0.080 0.007 1.374 1.294 N 2 A A C3' C2' C C 8 8 -0.068 0.011 1.523 1.455 N 2 A A N1 C6 C C 15 15 -0.041 0.006 1.367 1.326 N 2 A A C8 N9 G G 17 17 -0.056 0.007 1.374 1.318 N 2 A A N9 C4 G G 17 17 -0.057 0.008 1.375 1.318 N 3 A A C2' C1' C C 1 1 -0.056 0.008 1.526 1.470 N 3 A A C2' C1' G G 3 3 -0.050 0.008 1.526 1.476 N 3 A A C8 N9 G G 3 3 -0.058 0.007 1.374 1.316 N 3 A A C2' C1' G G 5 5 -0.056 0.008 1.526 1.470 N 3 A A C8 N9 G G 5 5 -0.069 0.007 1.374 1.305 N 3 A A C8 N9 G G 17 17 -0.049 0.007 1.374 1.325 N 4 A A C2' C1' C C 1 1 -0.056 0.008 1.526 1.470 N 4 A A C2' C1' G G 3 3 -0.054 0.008 1.526 1.472 N 4 A A C8 N9 G G 3 3 -0.058 0.007 1.374 1.316 N 4 A A C2' C1' G G 5 5 -0.052 0.008 1.526 1.474 N 4 A A C8 N9 G G 5 5 -0.074 0.007 1.374 1.300 N 4 A A C8 N9 G G 17 17 -0.058 0.007 1.374 1.316 N 5 A A C2' C1' C C 1 1 -0.064 0.008 1.526 1.462 N 5 A A C2' C1' G G 3 3 -0.064 0.008 1.526 1.462 N 5 A A C8 N9 G G 3 3 -0.054 0.007 1.374 1.320 N 5 A A C2' C1' G G 5 5 -0.058 0.008 1.526 1.468 N 5 A A C8 N9 G G 5 5 -0.077 0.007 1.374 1.297 N 5 A A N1 C6 C C 15 15 -0.039 0.006 1.367 1.328 N 5 A A C8 N9 G G 17 17 -0.049 0.007 1.374 1.325 N 6 A A C2' C1' C C 1 1 -0.067 0.008 1.526 1.459 N 6 A A C8 N9 G G 3 3 -0.061 0.007 1.374 1.313 N 6 A A C2' C1' G G 5 5 -0.059 0.008 1.526 1.467 N 6 A A C8 N9 G G 5 5 -0.078 0.007 1.374 1.296 N 6 A A C8 N9 G G 17 17 -0.043 0.007 1.374 1.331 N 7 A A C2' C1' C C 1 1 -0.069 0.008 1.526 1.457 N 7 A A C2' C1' G G 3 3 -0.050 0.008 1.526 1.476 N 7 A A C8 N9 G G 3 3 -0.054 0.007 1.374 1.320 N 7 A A C8 N9 G G 5 5 -0.078 0.007 1.374 1.296 N 7 A A C3' C2' C C 8 8 -0.068 0.011 1.523 1.455 N 7 A A N1 C6 C C 13 13 -0.041 0.006 1.367 1.326 N 7 A A N1 C6 C C 15 15 -0.036 0.006 1.367 1.331 N 7 A A C8 N9 G G 17 17 -0.048 0.007 1.374 1.326 N 8 A A C2' C1' C C 1 1 -0.061 0.008 1.526 1.465 N 8 A A C8 N9 G G 3 3 -0.059 0.007 1.374 1.315 N 8 A A C2' C1' G G 5 5 -0.048 0.008 1.526 1.478 N 8 A A C8 N9 G G 5 5 -0.079 0.007 1.374 1.295 N 8 A A C8 N9 G G 17 17 -0.049 0.007 1.374 1.325 N SOLUTION NMR STRUCTURE OF AN ANALOG OF THE YEAST TRNA PHE T STEM LOOP CONTAINING RIBOTHYMIDINE AT ITS NATURALLY OCCURRING POSITION 1 N N covale 1.608 both A G 5 A O3' G 5 1_555 A 5MU 6 A P 5MU 6 1_555 covale 1.632 both A 5MU 6 A O3' 5MU 6 1_555 A U 7 A P U 7 1_555 covale 1.613 both A U 11 A O3' U 11 1_555 A CH 12 A P CH 12 1_555 covale 1.615 both A CH 12 A O3' CH 12 1_555 A C 13 A P C 13 1_555 hydrog WATSON-CRICK A C 1 A N3 C 1 1_555 A G 17 A N1 G 17 1_555 hydrog WATSON-CRICK A C 1 A N4 C 1 1_555 A G 17 A O6 G 17 1_555 hydrog WATSON-CRICK A C 1 A O2 C 1 1_555 A G 17 A N2 G 17 1_555 hydrog WATSON-CRICK A U 2 A N3 U 2 1_555 A A 16 A N1 A 16 1_555 hydrog WATSON-CRICK A U 2 A O4 U 2 1_555 A A 16 A N6 A 16 1_555 hydrog G-CH PAIR A G 3 A N7 G 3 1_555 A CH 12 A N4 CH 12 1_555 hydrog WATSON-CRICK A G 3 A N1 G 3 1_555 A C 15 A N3 C 15 1_555 hydrog WATSON-CRICK A G 3 A N2 G 3 1_555 A C 15 A O2 C 15 1_555 hydrog WATSON-CRICK A G 3 A O6 G 3 1_555 A C 15 A N4 C 15 1_555 hydrog WATSON-CRICK A U 4 A N3 U 4 1_555 A A 14 A N1 A 14 1_555 hydrog WATSON-CRICK A U 4 A O4 U 4 1_555 A A 14 A N6 A 14 1_555 hydrog WATSON-CRICK A G 5 A N1 G 5 1_555 A C 13 A N3 C 13 1_555 hydrog WATSON-CRICK A G 5 A N2 G 5 1_555 A C 13 A O2 C 13 1_555 hydrog WATSON-CRICK A G 5 A O6 G 5 1_555 A C 13 A N4 C 13 1_555 RNA TRNA, T STEM LOOP, TRNA DOMAIN, RNA HAIRPIN, RNA FOLDING, RNA 1KOS PDB 1 1KOS 1 17 1KOS 1 17 1KOS A 1 1 17 1 P 1