1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kang, H.
Tinoco Junior, I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
25
1943
1949
10.1093/nar/25.10.1943
9115361
A mutant RNA pseudoknot that promotes ribosomal frameshifting in mouse mammary tumor virus.
1997
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
259
135
Conformation of a Non-Frameshifting RNA Pseudoknot from Mouse Mammary Tumor Virus
1996
10.2210/pdb1kpd/pdb
pdb_00001kpd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
10348.243
RNA PSEUDOKNOT APKA27G
1
syn
polymer
no
no
GGCGCAGUGGGCUAGCGCCACUCAAAGGCCCG
GGCGCAGUGGGCUAGCGCCACUCAAAGGCCCG
A
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
-39.210
1
19
A
1
A
19
-2.607
A_G1:C19_A
1
-14.839
-0.515
-1.181
-0.262
-22.020
1
19
A
2
A
18
-3.691
A_G2:C18_A
2
3.252
-0.389
-0.164
-0.307
-7.844
1
19
A
3
A
17
-4.319
A_C3:G17_A
3
-0.600
0.425
-0.072
-0.363
0.705
1
19
A
4
A
16
-2.405
A_G4:C16_A
4
-4.075
-0.424
-0.550
-0.400
31.459
1
19
A
5
A
15
-4.856
A_C5:G15_A
5
-0.677
0.406
-0.929
-0.256
-31.383
1
19
A
9
A
31
-2.913
A_G9:C31_A
6
-13.356
-0.507
-0.991
-0.318
-21.136
1
19
A
10
A
30
-4.397
A_G10:C30_A
7
-7.171
-0.420
-0.553
-0.311
-11.826
1
19
A
11
A
29
-2.992
A_G11:C29_A
8
-13.653
-0.467
-0.349
-0.348
-3.390
1
19
A
12
A
28
1.371
A_C12:G28_A
9
19.238
0.624
0.214
-0.386
28.640
1
28
A
13
A
27
6.526
A_U13:G27_A
10
14.337
2.297
-0.821
-0.363
3.453
33.583
A
A
1
2
-15.155
A
A
19
18
3.156
-8.612
-0.870
-1.171
AA_G1G2:C18C19_AA
1
-6.355
11.183
31.878
-0.562
0.425
2.628
37.603
A
A
2
3
19.932
A
A
18
17
3.065
12.613
-0.293
-0.859
AA_G2C3:G17C18_AA
2
-1.282
2.026
35.474
-2.807
0.304
3.780
25.078
A
A
3
4
-10.462
A
A
17
16
3.620
-4.508
0.116
-1.287
AA_C3G4:C16G17_AA
3
2.948
-6.840
24.501
-1.439
0.730
2.501
33.413
A
A
4
5
9.800
A
A
16
15
2.638
5.609
-0.078
-0.611
AA_G4C5:G15C16_AA
4
0.726
-1.269
32.944
-1.798
0.231
2.883
32.151
A
A
9
10
9.732
A
A
31
30
3.102
5.353
-0.186
-1.098
AA_G9G10:C30C31_AA
5
-3.873
7.042
31.482
-2.869
-0.305
3.063
31.554
A
A
10
11
5.488
A
A
30
29
3.203
2.978
0.306
-1.135
AA_G10G11:C29C30_AA
6
-1.767
3.256
31.368
-2.619
-0.879
3.572
34.203
A
A
11
12
-2.796
A
A
29
28
3.617
-1.636
0.335
-1.443
AA_G11C12:G28C29_AA
7
-5.934
10.142
33.661
-2.167
-1.606
2.815
28.445
A
A
12
13
-3.931
A
A
28
27
2.699
-1.915
0.461
-1.300
AA_C12U13:G27G28_AA
8
6.323
-12.981
27.683
-2.270
0.302
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1997-04-01
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1997-01-02
REL
REL
1
G
1
n
1
G
1
A
G
2
n
2
G
2
A
C
3
n
3
C
3
A
G
4
n
4
G
4
A
C
5
n
5
C
5
A
A
6
n
6
A
6
A
G
7
n
7
G
7
A
U
8
n
8
U
8
A
G
9
n
9
G
9
A
G
10
n
10
G
10
A
G
11
n
11
G
11
A
C
12
n
12
C
12
A
U
13
n
13
U
13
A
A
14
n
14
A
14
A
G
15
n
15
G
15
A
C
16
n
16
C
16
A
G
17
n
17
G
17
A
C
18
n
18
C
18
A
C
19
n
19
C
19
A
A
20
n
20
A
20
A
C
21
n
21
C
21
A
U
22
n
22
U
22
A
C
23
n
23
C
23
A
A
24
n
24
A
24
A
A
25
n
25
A
25
A
A
26
n
26
A
26
A
G
27
n
27
G
27
A
G
28
n
28
G
28
A
C
29
n
29
C
29
A
C
30
n
30
C
30
A
C
31
n
31
C
31
A
G
32
n
32
G
32
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O2'
HO2'
C
A
5
26
1.44
1
A
A
HO2'
O4'
C
A
19
20
1.48
1
A
A
H41
O6
C
G
3
17
1.60
A MUTANT RNA PSEUDOKNOT THAT PROMOTES RIBOSOMAL FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE
1
N
N
hydrog
WATSON-CRICK
A
G
1
A
N1
G
1
1_555
A
C
19
A
N3
C
19
1_555
hydrog
WATSON-CRICK
A
G
1
A
N2
G
1
1_555
A
C
19
A
O2
C
19
1_555
hydrog
WATSON-CRICK
A
G
1
A
O6
G
1
1_555
A
C
19
A
N4
C
19
1_555
hydrog
WATSON-CRICK
A
G
2
A
N1
G
2
1_555
A
C
18
A
N3
C
18
1_555
hydrog
WATSON-CRICK
A
G
2
A
N2
G
2
1_555
A
C
18
A
O2
C
18
1_555
hydrog
WATSON-CRICK
A
G
2
A
O6
G
2
1_555
A
C
18
A
N4
C
18
1_555
hydrog
WATSON-CRICK
A
C
3
A
N3
C
3
1_555
A
G
17
A
N1
G
17
1_555
hydrog
WATSON-CRICK
A
C
3
A
N4
C
3
1_555
A
G
17
A
O6
G
17
1_555
hydrog
WATSON-CRICK
A
C
3
A
O2
C
3
1_555
A
G
17
A
N2
G
17
1_555
hydrog
WATSON-CRICK
A
G
4
A
N1
G
4
1_555
A
C
16
A
N3
C
16
1_555
hydrog
WATSON-CRICK
A
G
4
A
N2
G
4
1_555
A
C
16
A
O2
C
16
1_555
hydrog
WATSON-CRICK
A
G
4
A
O6
G
4
1_555
A
C
16
A
N4
C
16
1_555
hydrog
WATSON-CRICK
A
C
5
A
N3
C
5
1_555
A
G
15
A
N1
G
15
1_555
hydrog
WATSON-CRICK
A
C
5
A
N4
C
5
1_555
A
G
15
A
O6
G
15
1_555
hydrog
WATSON-CRICK
A
C
5
A
O2
C
5
1_555
A
G
15
A
N2
G
15
1_555
hydrog
WATSON-CRICK
A
G
9
A
N1
G
9
1_555
A
C
31
A
N3
C
31
1_555
hydrog
WATSON-CRICK
A
G
9
A
N2
G
9
1_555
A
C
31
A
O2
C
31
1_555
hydrog
WATSON-CRICK
A
G
9
A
O6
G
9
1_555
A
C
31
A
N4
C
31
1_555
hydrog
WATSON-CRICK
A
G
10
A
N1
G
10
1_555
A
C
30
A
N3
C
30
1_555
hydrog
WATSON-CRICK
A
G
10
A
N2
G
10
1_555
A
C
30
A
O2
C
30
1_555
hydrog
WATSON-CRICK
A
G
10
A
O6
G
10
1_555
A
C
30
A
N4
C
30
1_555
hydrog
G-C PAIR
A
G
10
A
N1
G
10
1_555
A
C
31
A
O2
C
31
1_555
hydrog
WATSON-CRICK
A
G
11
A
N1
G
11
1_555
A
C
29
A
N3
C
29
1_555
hydrog
WATSON-CRICK
A
G
11
A
N2
G
11
1_555
A
C
29
A
O2
C
29
1_555
hydrog
WATSON-CRICK
A
G
11
A
O6
G
11
1_555
A
C
29
A
N4
C
29
1_555
hydrog
WATSON-CRICK
A
C
12
A
N3
C
12
1_555
A
G
28
A
N1
G
28
1_555
hydrog
WATSON-CRICK
A
C
12
A
N4
C
12
1_555
A
G
28
A
O6
G
28
1_555
hydrog
WATSON-CRICK
A
C
12
A
O2
C
12
1_555
A
G
28
A
N2
G
28
1_555
hydrog
TYPE_28_PAIR
A
U
13
A
N3
U
13
1_555
A
G
27
A
O6
G
27
1_555
hydrog
TYPE_28_PAIR
A
U
13
A
O2
U
13
1_555
A
G
27
A
N1
G
27
1_555
RNA
RIBONUCLEIC ACID, RNA PSEUDOKNOT, RNA
1KPD
PDB
1
1KPD
1
32
1KPD
1
32
1KPD
A
1
1
32
1
P 1