1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Iwahara, J. Iwahara, M. Daughdrill, G.W. Ford, J. Clubb, R.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK EMBO J. EMJODG 0897 0261-4189 21 1197 1209 10.1093/emboj/21.5.1197 11867548 The structure of the Dead ringer-DNA complex reveals how AT-rich interaction domains (ARIDs) recognize DNA. 2002 10.2210/pdb1kqq/pdb pdb_00001kqq 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 4631.005 5'-D(*CP*CP*TP*GP*TP*AP*TP*TP*GP*AP*TP*GP*TP*GP*G)-3' 1 syn polymer 4546.990 5'-D(*CP*CP*AP*CP*AP*TP*CP*AP*AP*TP*AP*CP*AP*GP*G)-3' 1 syn polymer 16145.514 DEAD RINGER PROTEIN A/T Rich Interaction Domain F355L 1 man polymer no no (DC)(DC)(DT)(DG)(DT)(DA)(DT)(DT)(DG)(DA)(DT)(DG)(DT)(DG)(DG) CCTGTATTGATGTGG B polydeoxyribonucleotide no no (DC)(DC)(DA)(DC)(DA)(DT)(DC)(DA)(DA)(DT)(DA)(DC)(DA)(DG)(DG) CCACATCAATACAGG C polydeoxyribonucleotide no no GSGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQE IIKGLHLPSSITSAALTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYG GSGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQE IIKGLHLPSSITSAALTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n fruit fly Drosophila Escherichia Escherichia coli sample dri 7227 Drosophila melanogaster 511693 Escherichia coli BL21 BL21 PLASMID pGEX-4T-1 7.344 1 19 B 401 C 430 -1.337 B_DC401:DG430_C 1 -0.357 0.170 -0.037 -0.178 4.110 1 19 B 402 C 429 -2.639 B_DC402:DG429_C 2 -1.840 0.140 -0.186 -0.172 2.157 1 20 B 403 C 428 -2.614 B_DT403:DA428_C 3 -7.529 -0.031 -0.042 -0.089 -0.040 1 19 B 404 C 427 -2.082 B_DG404:DC427_C 4 -7.903 -0.161 0.088 -0.183 -1.373 1 20 B 405 C 426 -3.168 B_DT405:DA426_C 5 -6.283 -0.034 0.133 -0.085 -6.237 1 20 B 406 C 425 -0.014 B_DA406:DT425_C 6 -16.188 -0.041 -0.519 -0.136 3.255 1 20 B 407 C 424 -2.347 B_DT407:DA424_C 7 -4.102 -0.025 -0.517 -0.126 -15.752 1 20 B 408 C 423 -1.237 B_DT408:DA423_C 8 -7.240 -0.041 -0.112 -0.074 0.439 1 19 B 409 C 422 -1.716 B_DG409:DC422_C 9 -3.803 -0.158 -0.114 -0.181 15.366 1 20 B 410 C 421 -3.194 B_DA410:DT421_C 10 -10.839 0.071 0.243 -0.069 -0.266 1 20 B 411 C 420 -2.643 B_DT411:DA420_C 11 -6.421 -0.017 -0.080 -0.088 -4.588 1 19 B 412 C 419 2.870 B_DG412:DC419_C 12 -16.427 -0.228 -0.774 -0.300 -0.831 1 20 B 413 C 418 -6.280 B_DT413:DA418_C 13 -14.097 -0.091 0.782 -0.207 -1.450 1 19 B 414 C 417 -1.994 B_DG414:DC417_C 14 -6.589 -0.164 0.096 -0.184 -11.132 1 19 B 415 C 416 -1.719 B_DG415:DC416_C 15 -1.180 -0.148 -0.531 -0.187 2.973 33.444 B B 401 402 24.373 C C 430 429 3.728 13.543 -0.777 -0.549 BB_DC401DC402:DG429DG430_CC 1 6.757 -12.161 29.911 -3.384 2.563 3.998 34.207 B B 402 403 8.974 C C 429 428 4.010 5.258 0.098 0.216 BB_DC402DT403:DA428DG429_CC 2 0.874 -1.491 33.801 -0.655 0.003 3.713 36.135 B B 403 404 18.243 C C 428 427 3.783 11.140 -0.222 0.325 BB_DT403DG404:DC427DA428_CC 3 -1.581 2.589 34.394 -1.326 0.095 3.516 33.868 B B 404 405 16.349 C C 427 426 3.558 9.406 -0.229 0.325 BB_DG404DT405:DA426DC427_CC 4 -0.436 0.758 32.570 -1.114 0.315 3.883 39.221 B B 405 406 14.090 C C 426 425 3.811 9.361 0.262 0.721 BB_DT405DA406:DT425DA426_CC 5 3.605 -5.426 37.966 -0.264 0.125 3.296 33.261 B B 406 407 -4.320 C C 425 424 3.310 -2.470 0.158 0.083 BB_DA406DT407:DA424DT425_CC 6 0.055 -0.096 33.172 0.563 -0.267 4.666 41.614 B B 407 408 5.698 C C 424 423 4.633 4.042 0.416 0.454 BB_DT407DT408:DA423DA424_CC 7 1.405 -1.980 41.403 0.030 -0.373 3.069 31.206 B B 408 409 5.123 C C 423 422 3.077 2.752 0.164 0.113 BB_DT408DG409:DC422DA423_CC 8 -0.938 1.745 31.074 -0.281 -0.473 2.916 39.210 B B 409 410 9.719 C C 422 421 2.820 6.489 -0.862 0.483 BB_DG409DA410:DT421DC422_CC 9 -2.954 4.425 38.582 0.035 0.972 4.476 34.396 B B 410 411 11.344 C C 421 420 4.485 6.668 0.156 0.365 BB_DA410DT411:DA420DT421_CC 10 0.596 -1.014 33.758 -0.822 -0.135 3.787 37.708 B B 411 412 13.166 C C 420 419 3.738 8.431 0.219 0.615 BB_DT411DG412:DC419DA420_CC 11 3.455 -5.396 36.629 -0.323 0.184 3.311 37.265 B B 412 413 6.829 C C 419 418 3.179 4.322 -0.900 0.304 BB_DG412DT413:DA418DC419_CC 12 -8.102 12.802 36.155 -0.102 0.325 3.842 35.285 B B 413 414 17.689 C C 418 417 3.702 10.542 0.480 0.930 BB_DT413DG414:DC417DA418_CC 13 4.324 -7.255 33.450 -0.318 -0.032 4.695 36.288 B B 414 415 17.980 C C 417 416 4.569 11.019 0.240 1.106 BB_DG414DG415:DC416DC417_CC 14 3.103 -5.063 34.493 -0.467 0.246 database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2002-03-06 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-10-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_ref_seq_dif.details RCSB Y RCSB 2002-01-07 REL The structure was determined using triple-resonance NMR methods along with various isotope-filtered techniques. Residues 1-2 and 134-139 are disordered in solution. structures with the lowest energy 50 20 3D_13C-separated_NOESY 3D_15N-separated_NOESY HNHA 3D_13C-separated_NOESY 2D_F1F2_13C-filtered_NOESY 3D_F1_13C15N-filtered_F2_13C-edited_NOESY 3D_F1_13C15N-filtered_F2_15N-edited_NOESY 2D_F2_13C-filtered_NOESY 2D_F1_13C-filtered_JUNSY 3D HNHB 0 6.7 ambient 310 K The structures are based on a total of 3402 restraints simulated annealing 1 lowest energy 2.0mM Dead ringer-DNA complex (protein U-13C,15N, DNA NA) 20mM Tris U-2H, 0.01% NaN3 NA, 0.5mM EDTA NA, 5mM DTT U-2H 93% H2O/7% D2O 1.4mM Dead ringer-DNA complex (protein U-13C,15N, DNA NA) 20mM Tris U-2H, 0.01% NaN3 NA, 0.5mM EDTA NA, 5mM DTT U-2H 100% D2O Bruker collection XwinNMR 2.6 Delaglio processing NMRPipe 2.0 Johnson data analysis NMRView 4.3 Brunger structure solution X-PLOR 3.851 Brunger refinement X-PLOR 3.851 500 Bruker DRX 600 Bruker DRX 750 Varian UNITYPLUS CYT 401 n 1 DC 401 B CYT 402 n 2 DC 402 B THY 403 n 3 DT 403 B GUA 404 n 4 DG 404 B THY 405 n 5 DT 405 B ADE 406 n 6 DA 406 B THY 407 n 7 DT 407 B THY 408 n 8 DT 408 B GUA 409 n 9 DG 409 B ADE 410 n 10 DA 410 B THY 411 n 11 DT 411 B GUA 412 n 12 DG 412 B THY 413 n 13 DT 413 B GUA 414 n 14 DG 414 B GUA 415 n 15 DG 415 B CYT 416 n 1 DC 416 C CYT 417 n 2 DC 417 C ADE 418 n 3 DA 418 C CYT 419 n 4 DC 419 C ADE 420 n 5 DA 420 C THY 421 n 6 DT 421 C CYT 422 n 7 DC 422 C ADE 423 n 8 DA 423 C ADE 424 n 9 DA 424 C THY 425 n 10 DT 425 C ADE 426 n 11 DA 426 C CYT 427 n 12 DC 427 C ADE 428 n 13 DA 428 C GUA 429 n 14 DG 429 C GUA 430 n 15 DG 430 C n 1 1 A n 2 2 A GLY 3 n 3 GLY 3 A TRP 4 n 4 TRP 4 A SER 5 n 5 SER 5 A PHE 6 n 6 PHE 6 A GLU 7 n 7 GLU 7 A GLU 8 n 8 GLU 8 A GLN 9 n 9 GLN 9 A PHE 10 n 10 PHE 10 A LYS 11 n 11 LYS 11 A GLN 12 n 12 GLN 12 A VAL 13 n 13 VAL 13 A ARG 14 n 14 ARG 14 A GLN 15 n 15 GLN 15 A LEU 16 n 16 LEU 16 A TYR 17 n 17 TYR 17 A GLU 18 n 18 GLU 18 A ILE 19 n 19 ILE 19 A ASN 20 n 20 ASN 20 A ASP 21 n 21 ASP 21 A ASP 22 n 22 ASP 22 A PRO 23 n 23 PRO 23 A LYS 24 n 24 LYS 24 A ARG 25 n 25 ARG 25 A LYS 26 n 26 LYS 26 A GLU 27 n 27 GLU 27 A PHE 28 n 28 PHE 28 A LEU 29 n 29 LEU 29 A ASP 30 n 30 ASP 30 A ASP 31 n 31 ASP 31 A LEU 32 n 32 LEU 32 A PHE 33 n 33 PHE 33 A SER 34 n 34 SER 34 A PHE 35 n 35 PHE 35 A MET 36 n 36 MET 36 A GLN 37 n 37 GLN 37 A LYS 38 n 38 LYS 38 A ARG 39 n 39 ARG 39 A GLY 40 n 40 GLY 40 A THR 41 n 41 THR 41 A PRO 42 n 42 PRO 42 A ILE 43 n 43 ILE 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A LEU 46 n 46 LEU 46 A PRO 47 n 47 PRO 47 A ILE 48 n 48 ILE 48 A MET 49 n 49 MET 49 A ALA 50 n 50 ALA 50 A LYS 51 n 51 LYS 51 A SER 52 n 52 SER 52 A VAL 53 n 53 VAL 53 A LEU 54 n 54 LEU 54 A ASP 55 n 55 ASP 55 A LEU 56 n 56 LEU 56 A TYR 57 n 57 TYR 57 A GLU 58 n 58 GLU 58 A LEU 59 n 59 LEU 59 A TYR 60 n 60 TYR 60 A ASN 61 n 61 ASN 61 A LEU 62 n 62 LEU 62 A VAL 63 n 63 VAL 63 A ILE 64 n 64 ILE 64 A ALA 65 n 65 ALA 65 A ARG 66 n 66 ARG 66 A GLY 67 n 67 GLY 67 A GLY 68 n 68 GLY 68 A LEU 69 n 69 LEU 69 A VAL 70 n 70 VAL 70 A ASP 71 n 71 ASP 71 A VAL 72 n 72 VAL 72 A ILE 73 n 73 ILE 73 A ASN 74 n 74 ASN 74 A LYS 75 n 75 LYS 75 A LYS 76 n 76 LYS 76 A LEU 77 n 77 LEU 77 A TRP 78 n 78 TRP 78 A GLN 79 n 79 GLN 79 A GLU 80 n 80 GLU 80 A ILE 81 n 81 ILE 81 A ILE 82 n 82 ILE 82 A LYS 83 n 83 LYS 83 A GLY 84 n 84 GLY 84 A LEU 85 n 85 LEU 85 A HIS 86 n 86 HIS 86 A LEU 87 n 87 LEU 87 A PRO 88 n 88 PRO 88 A SER 89 n 89 SER 89 A SER 90 n 90 SER 90 A ILE 91 n 91 ILE 91 A THR 92 n 92 THR 92 A SER 93 n 93 SER 93 A ALA 94 n 94 ALA 94 A ALA 95 n 95 ALA 95 A LEU 96 n 96 LEU 96 A THR 97 n 97 THR 97 A LEU 98 n 98 LEU 98 A ARG 99 n 99 ARG 99 A THR 100 n 100 THR 100 A GLN 101 n 101 GLN 101 A TYR 102 n 102 TYR 102 A MET 103 n 103 MET 103 A LYS 104 n 104 LYS 104 A TYR 105 n 105 TYR 105 A LEU 106 n 106 LEU 106 A TYR 107 n 107 TYR 107 A PRO 108 n 108 PRO 108 A TYR 109 n 109 TYR 109 A GLU 110 n 110 GLU 110 A CYS 111 n 111 CYS 111 A GLU 112 n 112 GLU 112 A LYS 113 n 113 LYS 113 A LYS 114 n 114 LYS 114 A ASN 115 n 115 ASN 115 A LEU 116 n 116 LEU 116 A SER 117 n 117 SER 117 A THR 118 n 118 THR 118 A PRO 119 n 119 PRO 119 A ALA 120 n 120 ALA 120 A GLU 121 n 121 GLU 121 A LEU 122 n 122 LEU 122 A GLN 123 n 123 GLN 123 A ALA 124 n 124 ALA 124 A ALA 125 n 125 ALA 125 A ILE 126 n 126 ILE 126 A ASP 127 n 127 ASP 127 A GLY 128 n 128 GLY 128 A ASN 129 n 129 ASN 129 A ARG 130 n 130 ARG 130 A ARG 131 n 131 ARG 131 A GLU 132 n 132 GLU 132 A GLY 133 n 133 GLY 133 A n 134 134 A n 135 135 A n 136 136 A n 137 137 A n 138 138 A n 139 139 A author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 48 C O ILE 48 A N VAL 53 C N VAL 53 1 A GLY 1 C GLY 1 1 Y 1 A SER 2 C SER 2 1 Y 1 A ARG 134 C ARG 134 1 Y 1 A ARG 135 C ARG 135 1 Y 1 A SER 136 C SER 136 1 Y 1 A SER 137 C SER 137 1 Y 1 A TYR 138 C TYR 138 1 Y 1 A GLY 139 C GLY 139 1 Y 2 A GLY 1 C GLY 1 1 Y 2 A SER 2 C SER 2 1 Y 2 A ARG 134 C ARG 134 1 Y 2 A ARG 135 C ARG 135 1 Y 2 A SER 136 C SER 136 1 Y 2 A SER 137 C SER 137 1 Y 2 A TYR 138 C TYR 138 1 Y 2 A GLY 139 C GLY 139 1 Y 3 A GLY 1 C GLY 1 1 Y 3 A SER 2 C SER 2 1 Y 3 A ARG 134 C ARG 134 1 Y 3 A ARG 135 C ARG 135 1 Y 3 A SER 136 C SER 136 1 Y 3 A SER 137 C SER 137 1 Y 3 A TYR 138 C TYR 138 1 Y 3 A GLY 139 C GLY 139 1 Y 4 A GLY 1 C GLY 1 1 Y 4 A SER 2 C SER 2 1 Y 4 A ARG 134 C ARG 134 1 Y 4 A ARG 135 C ARG 135 1 Y 4 A SER 136 C SER 136 1 Y 4 A SER 137 C SER 137 1 Y 4 A TYR 138 C TYR 138 1 Y 4 A GLY 139 C GLY 139 1 Y 5 A GLY 1 C GLY 1 1 Y 5 A SER 2 C SER 2 1 Y 5 A ARG 134 C ARG 134 1 Y 5 A ARG 135 C ARG 135 1 Y 5 A SER 136 C SER 136 1 Y 5 A SER 137 C SER 137 1 Y 5 A TYR 138 C TYR 138 1 Y 5 A GLY 139 C GLY 139 1 Y 6 A GLY 1 C GLY 1 1 Y 6 A SER 2 C SER 2 1 Y 6 A ARG 134 C ARG 134 1 Y 6 A ARG 135 C ARG 135 1 Y 6 A SER 136 C SER 136 1 Y 6 A SER 137 C SER 137 1 Y 6 A TYR 138 C TYR 138 1 Y 6 A GLY 139 C GLY 139 1 Y 7 A GLY 1 C GLY 1 1 Y 7 A SER 2 C SER 2 1 Y 7 A ARG 134 C ARG 134 1 Y 7 A ARG 135 C ARG 135 1 Y 7 A SER 136 C SER 136 1 Y 7 A SER 137 C SER 137 1 Y 7 A TYR 138 C TYR 138 1 Y 7 A GLY 139 C GLY 139 1 Y 8 A GLY 1 C GLY 1 1 Y 8 A SER 2 C SER 2 1 Y 8 A ARG 134 C ARG 134 1 Y 8 A ARG 135 C ARG 135 1 Y 8 A SER 136 C SER 136 1 Y 8 A SER 137 C SER 137 1 Y 8 A TYR 138 C TYR 138 1 Y 8 A GLY 139 C GLY 139 1 Y 9 A GLY 1 C GLY 1 1 Y 9 A SER 2 C SER 2 1 Y 9 A ARG 134 C ARG 134 1 Y 9 A ARG 135 C ARG 135 1 Y 9 A SER 136 C SER 136 1 Y 9 A SER 137 C SER 137 1 Y 9 A TYR 138 C TYR 138 1 Y 9 A GLY 139 C GLY 139 1 Y 10 A GLY 1 C GLY 1 1 Y 10 A SER 2 C SER 2 1 Y 10 A ARG 134 C ARG 134 1 Y 10 A ARG 135 C ARG 135 1 Y 10 A SER 136 C SER 136 1 Y 10 A SER 137 C SER 137 1 Y 10 A TYR 138 C TYR 138 1 Y 10 A GLY 139 C GLY 139 1 Y 11 A GLY 1 C GLY 1 1 Y 11 A SER 2 C SER 2 1 Y 11 A ARG 134 C ARG 134 1 Y 11 A ARG 135 C ARG 135 1 Y 11 A SER 136 C SER 136 1 Y 11 A SER 137 C SER 137 1 Y 11 A TYR 138 C TYR 138 1 Y 11 A GLY 139 C GLY 139 1 Y 12 A GLY 1 C GLY 1 1 Y 12 A SER 2 C SER 2 1 Y 12 A ARG 134 C ARG 134 1 Y 12 A ARG 135 C ARG 135 1 Y 12 A SER 136 C SER 136 1 Y 12 A SER 137 C SER 137 1 Y 12 A TYR 138 C TYR 138 1 Y 12 A GLY 139 C GLY 139 1 Y 13 A GLY 1 C GLY 1 1 Y 13 A SER 2 C SER 2 1 Y 13 A ARG 134 C ARG 134 1 Y 13 A ARG 135 C ARG 135 1 Y 13 A SER 136 C SER 136 1 Y 13 A SER 137 C SER 137 1 Y 13 A TYR 138 C TYR 138 1 Y 13 A GLY 139 C GLY 139 1 Y 14 A GLY 1 C GLY 1 1 Y 14 A SER 2 C SER 2 1 Y 14 A ARG 134 C ARG 134 1 Y 14 A ARG 135 C ARG 135 1 Y 14 A SER 136 C SER 136 1 Y 14 A SER 137 C SER 137 1 Y 14 A TYR 138 C TYR 138 1 Y 14 A GLY 139 C GLY 139 1 Y 15 A GLY 1 C GLY 1 1 Y 15 A SER 2 C SER 2 1 Y 15 A ARG 134 C ARG 134 1 Y 15 A ARG 135 C ARG 135 1 Y 15 A SER 136 C SER 136 1 Y 15 A SER 137 C SER 137 1 Y 15 A TYR 138 C TYR 138 1 Y 15 A GLY 139 C GLY 139 1 Y 16 A GLY 1 C GLY 1 1 Y 16 A SER 2 C SER 2 1 Y 16 A ARG 134 C ARG 134 1 Y 16 A ARG 135 C ARG 135 1 Y 16 A SER 136 C SER 136 1 Y 16 A SER 137 C SER 137 1 Y 16 A TYR 138 C TYR 138 1 Y 16 A GLY 139 C GLY 139 1 Y 17 A GLY 1 C GLY 1 1 Y 17 A SER 2 C SER 2 1 Y 17 A ARG 134 C ARG 134 1 Y 17 A ARG 135 C ARG 135 1 Y 17 A SER 136 C SER 136 1 Y 17 A SER 137 C SER 137 1 Y 17 A TYR 138 C TYR 138 1 Y 17 A GLY 139 C GLY 139 1 Y 18 A GLY 1 C GLY 1 1 Y 18 A SER 2 C SER 2 1 Y 18 A ARG 134 C ARG 134 1 Y 18 A ARG 135 C ARG 135 1 Y 18 A SER 136 C SER 136 1 Y 18 A SER 137 C SER 137 1 Y 18 A TYR 138 C TYR 138 1 Y 18 A GLY 139 C GLY 139 1 Y 19 A GLY 1 C GLY 1 1 Y 19 A SER 2 C SER 2 1 Y 19 A ARG 134 C ARG 134 1 Y 19 A ARG 135 C ARG 135 1 Y 19 A SER 136 C SER 136 1 Y 19 A SER 137 C SER 137 1 Y 19 A TYR 138 C TYR 138 1 Y 19 A GLY 139 C GLY 139 1 Y 20 A GLY 1 C GLY 1 1 Y 20 A SER 2 C SER 2 1 Y 20 A ARG 134 C ARG 134 1 Y 20 A ARG 135 C ARG 135 1 Y 20 A SER 136 C SER 136 1 Y 20 A SER 137 C SER 137 1 Y 20 A TYR 138 C TYR 138 1 Y 20 A GLY 139 C GLY 139 1 Y 1 A A HG H SER THR 117 118 1.25 1 A A O H ASP PHE 31 35 1.43 1 A A O H TRP ILE 78 82 1.48 1 A A O HG MET SER 49 52 1.48 1 A A O H PHE LEU 28 32 1.48 1 A A O H PRO GLN 119 123 1.49 1 A A OD1 H ASP ARG 22 25 1.52 1 A A H O MET SER 49 52 1.53 1 A A O H PRO GLU 108 112 1.57 2 A A O H TRP ILE 78 82 1.41 2 A A O H PRO GLN 119 123 1.47 2 A A O H ASP PHE 31 35 1.54 2 A A O HG1 LEU THR 96 100 1.58 2 A A O H PHE LEU 28 32 1.58 3 A A HH12 HD22 ARG ASN 99 129 1.23 3 A A O H TRP ILE 78 82 1.43 3 A A O H PRO GLN 119 123 1.47 3 A A O H PHE LEU 28 32 1.51 3 A A O H ASP PHE 31 35 1.53 3 A A O H PRO GLU 108 112 1.55 4 A A O H TRP ILE 78 82 1.47 4 A A O H ASP PHE 31 35 1.50 4 A A O H PRO GLU 108 112 1.51 4 A A O H PRO GLN 119 123 1.54 4 A A O H ALA ARG 95 99 1.56 4 A A HG OE1 SER GLU 117 121 1.57 4 A A O HH11 LEU ARG 62 66 1.57 5 A A O H ASP PHE 31 35 1.47 5 A A O H TRP ILE 78 82 1.48 5 A A O H PRO GLN 119 123 1.48 5 A A O H PHE LEU 28 32 1.50 5 A A HZ2 OD2 LYS ASP 26 30 1.51 5 A A O H ILE GLY 64 67 1.60 6 A A HG H SER THR 117 118 1.27 6 A A O H TRP ILE 78 82 1.49 6 A A O H ASP PHE 31 35 1.49 6 A A HG OE1 SER GLU 5 7 1.51 6 A A O H PHE LEU 28 32 1.51 6 A A H OE2 LEU GLU 69 110 1.52 6 A A O H PRO GLU 108 112 1.54 6 A A HG OE1 SER GLU 117 121 1.54 6 A A O H PRO GLN 119 123 1.56 6 A A HH21 OE1 ARG GLU 66 80 1.56 6 A A HE OE1 ARG GLU 66 80 1.58 7 A A HG H SER GLU 5 8 1.28 7 A A HH OD1 TYR ASP 17 30 1.34 7 A A O H PRO GLN 119 123 1.46 7 A A O H TRP ILE 78 82 1.49 7 A A H O MET SER 49 52 1.51 7 A A O H PHE LEU 28 32 1.53 8 A A O H TRP ILE 78 82 1.46 8 A A O H PHE LEU 28 32 1.49 8 A A O H PRO GLN 119 123 1.53 8 A A O H PRO GLU 108 112 1.54 8 A A O H ASP PHE 31 35 1.56 8 A A O H GLN VAL 9 13 1.59 9 A A O H TRP ILE 78 82 1.44 9 A A O H PRO GLN 119 123 1.48 9 A A O H ASP PHE 31 35 1.49 9 A A O H PHE LEU 28 32 1.52 9 A A H O MET SER 49 52 1.53 10 A A HG H SER THR 117 118 1.26 10 A A HE1 HH12 TRP ARG 78 99 1.30 10 A A O H TRP ILE 78 82 1.47 10 A A O H PRO GLN 119 123 1.55 10 A A O H PRO GLU 108 112 1.57 10 A A O H ALA ARG 95 99 1.59 10 A A O H ASP PHE 31 35 1.59 11 A A O H TRP ILE 78 82 1.49 11 A A O H PRO GLN 119 123 1.49 11 A A H O MET SER 49 52 1.51 11 A A OD1 H ASP ASP 30 31 1.57 11 A A HE21 O GLN ASN 9 44 1.59 12 A A O H TRP ILE 78 82 1.44 12 A A O H PRO GLN 119 123 1.48 12 A A HG OE1 SER GLU 117 121 1.48 12 A A O H ASP PHE 31 35 1.50 12 A A O H PRO GLU 108 112 1.54 12 A A H O MET SER 49 52 1.55 12 A A O H PHE LEU 28 32 1.56 12 A A O H SER THR 93 97 1.60 13 A A HG H SER GLU 5 8 1.28 13 A A HG H SER THR 117 118 1.33 13 A A O H TRP ILE 78 82 1.44 13 A A HG OE1 SER GLU 117 121 1.50 13 A A O H PRO GLN 119 123 1.54 13 A A O H PRO GLU 108 112 1.59 13 A A H O MET SER 49 52 1.60 14 A A HH OD1 TYR ASP 17 30 1.40 14 A A O H TRP ILE 78 82 1.43 14 A A O H PRO GLN 119 123 1.52 14 A A O H PHE LEU 28 32 1.52 14 A A O H ASP PHE 31 35 1.54 14 A A O H PRO GLU 108 112 1.54 15 A A HD22 HH11 ASN ARG 20 25 1.17 15 A A O H PRO GLN 119 123 1.47 15 A A O H TRP ILE 78 82 1.54 15 A A O H PRO GLU 108 112 1.56 16 A A O H PRO GLN 119 123 1.51 16 A A O H TRP ILE 78 82 1.51 16 A A H O MET SER 49 52 1.56 16 A A O H SER THR 93 97 1.59 17 A A O H TRP ILE 78 82 1.44 17 A A O H ASP PHE 31 35 1.48 17 A A O H PRO GLN 119 123 1.52 17 A A O H PHE LEU 28 32 1.53 17 A A O H PRO GLU 108 112 1.56 17 A A O H GLU GLY 80 84 1.58 17 A A H O MET SER 49 52 1.59 18 A A HH21 HH ARG TYR 45 105 1.34 18 A A O H TRP ILE 78 82 1.46 18 A A O H ASP PHE 31 35 1.50 18 A A O H PRO GLN 119 123 1.50 18 A A O H PRO GLU 108 112 1.57 19 A A O H PRO GLN 119 123 1.47 19 A A O H TRP ILE 78 82 1.47 19 A A O HD21 TYR ASN 57 61 1.51 19 A A H O MET SER 49 52 1.52 19 A A O HG MET SER 49 52 1.58 19 A A O H PRO GLU 108 112 1.60 20 A A HH OD1 TYR ASP 17 30 1.31 20 A A O H TRP ILE 78 82 1.47 20 A A O H PRO GLN 119 123 1.49 20 A A H O MET SER 49 52 1.55 1 -3.86 0.60 122.90 119.04 C C C C6 C5 C7 DT DT DT 421 421 421 N 2 -3.65 0.60 122.90 119.25 C C C C6 C5 C7 DT DT DT 421 421 421 N 3 -3.73 0.60 122.90 119.17 C C C C6 C5 C7 DT DT DT 421 421 421 N 4 -3.82 0.60 122.90 119.08 C C C C6 C5 C7 DT DT DT 421 421 421 N 5 -3.78 0.60 122.90 119.12 C C C C6 C5 C7 DT DT DT 421 421 421 N 6 -3.81 0.60 122.90 119.09 C C C C6 C5 C7 DT DT DT 421 421 421 N 9 -3.70 0.60 122.90 119.20 B B B C6 C5 C7 DT DT DT 407 407 407 N 9 -3.72 0.60 122.90 119.18 C C C C6 C5 C7 DT DT DT 421 421 421 N 11 3.64 0.60 118.00 121.64 C C C C4 C5 C6 DT DT DT 421 421 421 N 11 -3.66 0.60 122.90 119.24 C C C C6 C5 C7 DT DT DT 421 421 421 N 12 -3.80 0.60 122.90 119.10 C C C C6 C5 C7 DT DT DT 421 421 421 N 13 -3.87 0.60 122.90 119.03 C C C C6 C5 C7 DT DT DT 421 421 421 N 14 -3.83 0.60 122.90 119.07 C C C C6 C5 C7 DT DT DT 421 421 421 N 15 -3.81 0.60 122.90 119.09 C C C C6 C5 C7 DT DT DT 421 421 421 N 16 -3.64 0.60 122.90 119.26 B B B C6 C5 C7 DT DT DT 407 407 407 N 16 -3.66 0.60 122.90 119.24 B B B C6 C5 C7 DT DT DT 408 408 408 N 17 -3.90 0.60 122.90 119.00 C C C C6 C5 C7 DT DT DT 421 421 421 N 18 -3.65 0.60 122.90 119.25 C C C C6 C5 C7 DT DT DT 421 421 421 N 19 -3.86 0.60 122.90 119.04 C C C C6 C5 C7 DT DT DT 421 421 421 N 20 -3.83 0.60 122.90 119.07 C C C C6 C5 C7 DT DT DT 421 421 421 N 1 A ASP 55 -66.31 90.33 1 A SER 93 -96.05 34.64 2 A ILE 19 -37.56 -38.66 2 A ASP 55 -63.05 92.38 2 A SER 89 -55.94 0.61 2 A SER 93 -95.33 35.02 3 A ASP 55 -56.41 105.28 3 A SER 89 -58.19 0.66 3 A SER 93 -102.46 47.77 3 A ARG 131 -56.63 171.34 3 A GLU 132 -110.74 -156.59 4 A ILE 19 -35.28 -39.26 4 A ASP 55 -65.17 89.43 4 A SER 89 -55.61 -1.24 4 A SER 93 -104.25 43.37 5 A TRP 4 -37.86 90.61 5 A ILE 19 -37.79 -39.55 5 A ALA 50 73.15 37.98 5 A ASP 55 -62.89 88.51 5 A TYR 60 -56.36 -73.66 5 A SER 89 -57.57 -0.35 5 A SER 93 -101.88 41.77 6 A ASP 55 -63.73 88.59 6 A SER 89 -61.37 1.16 6 A SER 93 -95.49 34.29 7 A ARG 45 -176.45 123.20 7 A ASP 55 -61.86 91.57 7 A SER 89 -56.38 -0.50 7 A SER 93 -92.04 30.51 8 A ASP 55 -62.27 93.26 8 A TYR 60 -61.28 -70.64 8 A SER 89 -55.73 0.01 8 A SER 93 -96.32 40.07 9 A TRP 4 -114.23 75.88 9 A ASP 55 -59.56 99.96 9 A GLU 132 -108.43 -153.60 10 A TRP 4 -113.90 78.93 10 A ILE 19 -38.02 -37.08 10 A ARG 45 -171.79 120.23 10 A ASP 55 -63.05 91.80 10 A SER 89 -63.44 0.87 10 A SER 93 -90.50 30.54 11 A TRP 4 -39.45 91.19 11 A ASN 20 -178.04 123.04 11 A ASP 55 -68.35 89.60 11 A SER 89 -55.83 -0.75 11 A SER 93 -94.20 37.82 12 A ASP 55 -65.74 90.68 12 A SER 89 -58.06 1.42 12 A SER 93 -90.26 30.95 13 A ILE 19 -35.74 -38.27 13 A ASP 55 -63.41 92.94 13 A SER 89 -55.82 1.26 14 A ALA 50 72.05 39.76 14 A ASP 55 -63.17 98.41 14 A SER 89 -60.23 1.28 14 A SER 93 -93.88 32.36 15 A ASN 20 179.98 125.46 15 A ASP 55 -65.49 88.66 15 A SER 93 -97.50 45.19 15 A GLU 132 -111.17 -152.66 16 A ILE 19 -38.13 -39.01 16 A ASP 55 -62.04 97.16 16 A SER 89 -59.58 -1.61 16 A GLU 132 -132.55 -152.76 17 A ASN 44 -63.54 -74.51 17 A ALA 50 71.80 39.13 17 A ASP 55 -65.04 93.43 17 A TYR 60 -58.81 -70.09 17 A SER 89 -56.49 0.99 17 A SER 93 -91.23 32.67 18 A ILE 19 -38.96 -39.72 18 A ARG 45 -170.40 124.45 18 A ASP 55 -65.84 90.96 18 A SER 89 -56.10 -0.56 18 A SER 93 -89.56 30.05 19 A ASP 55 -66.28 90.94 19 A SER 93 -101.55 40.67 20 A ILE 19 -37.82 -39.94 20 A ASP 55 -65.17 91.64 20 A SER 89 -60.84 0.91 20 A SER 93 -94.79 39.96 Solution Structure of the Dead ringer ARID-DNA Complex 1 N N 2 N N 3 N N A PHE 6 C PHE 6 HELX_P A GLU 18 C GLU 18 1 1 13 A PRO 23 C PRO 23 HELX_P A ARG 39 C ARG 39 1 2 17 A LEU 56 C LEU 56 HELX_P A ALA 65 C ALA 65 1 3 10 A LEU 69 C LEU 69 HELX_P A LYS 75 C LYS 75 1 4 7 A TRP 78 C TRP 78 HELX_P A GLY 84 C GLY 84 1 5 7 A ALA 94 C ALA 94 HELX_P A TYR 105 C TYR 105 1 6 12 A TYR 107 C TYR 107 HELX_P A LYS 113 C LYS 113 1 7 7 A PRO 119 C PRO 119 HELX_P A ASN 129 C ASN 129 1 8 11 hydrog WATSON-CRICK B DC 401 A N3 DC 1 1_555 C DG 430 B N1 DG 15 1_555 hydrog WATSON-CRICK B DC 401 A N4 DC 1 1_555 C DG 430 B O6 DG 15 1_555 hydrog WATSON-CRICK B DC 401 A O2 DC 1 1_555 C DG 430 B N2 DG 15 1_555 hydrog WATSON-CRICK B DC 402 A N3 DC 2 1_555 C DG 429 B N1 DG 14 1_555 hydrog WATSON-CRICK B DC 402 A N4 DC 2 1_555 C DG 429 B O6 DG 14 1_555 hydrog WATSON-CRICK B DC 402 A O2 DC 2 1_555 C DG 429 B N2 DG 14 1_555 hydrog WATSON-CRICK B DT 403 A N3 DT 3 1_555 C DA 428 B N1 DA 13 1_555 hydrog WATSON-CRICK B DT 403 A O4 DT 3 1_555 C DA 428 B N6 DA 13 1_555 hydrog WATSON-CRICK B DG 404 A N1 DG 4 1_555 C DC 427 B N3 DC 12 1_555 hydrog WATSON-CRICK B DG 404 A N2 DG 4 1_555 C DC 427 B O2 DC 12 1_555 hydrog WATSON-CRICK B DG 404 A O6 DG 4 1_555 C DC 427 B N4 DC 12 1_555 hydrog WATSON-CRICK B DT 405 A N3 DT 5 1_555 C DA 426 B N1 DA 11 1_555 hydrog WATSON-CRICK B DT 405 A O4 DT 5 1_555 C DA 426 B N6 DA 11 1_555 hydrog WATSON-CRICK B DA 406 A N1 DA 6 1_555 C DT 425 B N3 DT 10 1_555 hydrog WATSON-CRICK B DA 406 A N6 DA 6 1_555 C DT 425 B O4 DT 10 1_555 hydrog WATSON-CRICK B DT 407 A N3 DT 7 1_555 C DA 424 B N1 DA 9 1_555 hydrog WATSON-CRICK B DT 407 A O4 DT 7 1_555 C DA 424 B N6 DA 9 1_555 hydrog WATSON-CRICK B DT 408 A N3 DT 8 1_555 C DA 423 B N1 DA 8 1_555 hydrog WATSON-CRICK B DT 408 A O4 DT 8 1_555 C DA 423 B N6 DA 8 1_555 hydrog WATSON-CRICK B DG 409 A N1 DG 9 1_555 C DC 422 B N3 DC 7 1_555 hydrog WATSON-CRICK B DG 409 A N2 DG 9 1_555 C DC 422 B O2 DC 7 1_555 hydrog WATSON-CRICK B DG 409 A O6 DG 9 1_555 C DC 422 B N4 DC 7 1_555 hydrog WATSON-CRICK B DA 410 A N1 DA 10 1_555 C DT 421 B N3 DT 6 1_555 hydrog WATSON-CRICK B DA 410 A N6 DA 10 1_555 C DT 421 B O4 DT 6 1_555 hydrog WATSON-CRICK B DT 411 A N3 DT 11 1_555 C DA 420 B N1 DA 5 1_555 hydrog WATSON-CRICK B DT 411 A O4 DT 11 1_555 C DA 420 B N6 DA 5 1_555 hydrog WATSON-CRICK B DG 412 A N1 DG 12 1_555 C DC 419 B N3 DC 4 1_555 hydrog WATSON-CRICK B DG 412 A N2 DG 12 1_555 C DC 419 B O2 DC 4 1_555 hydrog WATSON-CRICK B DG 412 A O6 DG 12 1_555 C DC 419 B N4 DC 4 1_555 hydrog WATSON-CRICK B DT 413 A N3 DT 13 1_555 C DA 418 B N1 DA 3 1_555 hydrog WATSON-CRICK B DT 413 A O4 DT 13 1_555 C DA 418 B N6 DA 3 1_555 hydrog WATSON-CRICK B DG 414 A N1 DG 14 1_555 C DC 417 B N3 DC 2 1_555 hydrog WATSON-CRICK B DG 414 A N2 DG 14 1_555 C DC 417 B O2 DC 2 1_555 hydrog WATSON-CRICK B DG 414 A O6 DG 14 1_555 C DC 417 B N4 DC 2 1_555 hydrog WATSON-CRICK B DG 415 A N1 DG 15 1_555 C DC 416 B N3 DC 1 1_555 hydrog WATSON-CRICK B DG 415 A N2 DG 15 1_555 C DC 416 B O2 DC 1 1_555 hydrog WATSON-CRICK B DG 415 A O6 DG 15 1_555 C DC 416 B N4 DC 1 1_555 TRANSCRIPTION/DNA ARID, PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX DRI_DROME UNP 3 262 Q24573 GWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEII KGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYG 1KQQ PDB 1 1KQQ 1KQQ PDB 2 1KQQ 262 398 1KQQ 3 139 Q24573 A 1 3 139 401 415 1KQQ 401 415 1KQQ B 2 1 15 416 430 1KQQ 416 430 1KQQ C 3 1 15 1 cloning artifact GLY 1 1KQQ A Q24573 UNP 1 1 cloning artifact SER 2 1KQQ A Q24573 UNP 2 1 PHE engineered mutation LEU 96 1KQQ A Q24573 UNP 355 96 2 anti-parallel A ILE 48 C ILE 48 A MET 49 C MET 49 A SER 52 C SER 52 A VAL 53 C VAL 53