0.019144 0.011053 0.000000 0.000000 0.022105 0.000000 0.000000 0.000000 0.029546 0.00000 0.00000 0.00000 Savchenko, A. Zhang, R. Joachimiak, A. Edwards, A. Akarina, T. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 3 90.00 90.00 120.00 52.237 52.237 33.846 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proteins PSFGEY 0867 0887-3585 54 162 165 10.1002/prot.10585 14705033 X-ray crystal structure of CutA from Thermotoga maritima at 1.4 A resolution. 2004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2001-11-20 SBC-2 Si 111 channel MAD M x-ray 1 0.9793 1.0 0.9791 1.0 0.95200 1.0 19-ID APS 0.9793,0.9791,0.95200 SYNCHROTRON APS BEAMLINE 19-ID 15021.697 Protein TM1056, cutA 1 man polymer 18.015 water 125 nat water no yes MGSSHHHHHHSSGREALYF(MSE)GH(MSE)ILVYSTFPNEEKALEIGRKLLEKRLIACFNAFEIRSGYWWKGEIVQDKE WAAIFKTTEEKEKELYEELRKLHPYETPAIFTLKVENILTEY(MSE)NWLRESVLGS MGSSHHHHHHSSGREALYFMGHMILVYSTFPNEEKALEIGRKLLEKRLIACFNAFEIRSGYWWKGEIVQDKEWAAIFKTT EEKEKELYEELRKLHPYETPAIFTLKVENILTEYMNWLRESVLGS A APC012 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermotoga Escherichia Escherichia coli sample 2336 Thermotoga maritima 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID Protein was expressed as fusion with N-terminal tag MGSSHHHHHHSSGRENLYFQGHM and C-terminal fusion of GS modified peT15b 1 1.77 30.70 VAPOR DIFFUSION, HANGING DROP VAPOR DIFFUSION, HANGING DROP Midwest Center for Structural Genomics MCSG PSI, Protein Structure Initiative software repository Initial release Version format compliance Derived calculations Version format compliance Refinement description 1 0 2002-08-14 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-11 _software.classification _software.name SEQUENCE The assignement of Ile94 was based on high resolution electron density maps Y RCSB Y RCSB 2002-01-08 REL HOH water TIP 200 2 HOH HOH 200 A TIP 201 2 HOH HOH 201 A TIP 202 2 HOH HOH 202 A TIP 203 2 HOH HOH 203 A TIP 204 2 HOH HOH 204 A TIP 205 2 HOH HOH 205 A TIP 206 2 HOH HOH 206 A TIP 207 2 HOH HOH 207 A TIP 208 2 HOH HOH 208 A TIP 209 2 HOH HOH 209 A TIP 210 2 HOH HOH 210 A TIP 211 2 HOH HOH 211 A TIP 212 2 HOH HOH 212 A TIP 213 2 HOH HOH 213 A TIP 214 2 HOH HOH 214 A TIP 215 2 HOH HOH 215 A TIP 216 2 HOH HOH 216 A TIP 217 2 HOH HOH 217 A TIP 218 2 HOH HOH 218 A TIP 219 2 HOH HOH 219 A TIP 220 2 HOH HOH 220 A TIP 221 2 HOH HOH 221 A TIP 222 2 HOH HOH 222 A TIP 223 2 HOH HOH 223 A TIP 224 2 HOH HOH 224 A TIP 225 2 HOH HOH 225 A TIP 226 2 HOH HOH 226 A TIP 227 2 HOH HOH 227 A TIP 228 2 HOH HOH 228 A TIP 229 2 HOH HOH 229 A TIP 230 2 HOH HOH 230 A TIP 231 2 HOH HOH 231 A TIP 232 2 HOH HOH 232 A TIP 233 2 HOH HOH 233 A TIP 234 2 HOH HOH 234 A TIP 235 2 HOH HOH 235 A TIP 236 2 HOH HOH 236 A TIP 237 2 HOH HOH 237 A TIP 238 2 HOH HOH 238 A TIP 239 2 HOH HOH 239 A TIP 240 2 HOH HOH 240 A TIP 241 2 HOH HOH 241 A TIP 242 2 HOH HOH 242 A TIP 243 2 HOH HOH 243 A TIP 244 2 HOH HOH 244 A TIP 245 2 HOH HOH 245 A TIP 246 2 HOH HOH 246 A TIP 247 2 HOH HOH 247 A TIP 248 2 HOH HOH 248 A TIP 249 2 HOH HOH 249 A TIP 250 2 HOH HOH 250 A TIP 251 2 HOH HOH 251 A TIP 252 2 HOH HOH 252 A TIP 253 2 HOH HOH 253 A TIP 254 2 HOH HOH 254 A TIP 255 2 HOH HOH 255 A TIP 256 2 HOH HOH 256 A TIP 257 2 HOH HOH 257 A TIP 258 2 HOH HOH 258 A TIP 259 2 HOH HOH 259 A TIP 260 2 HOH HOH 260 A TIP 261 2 HOH HOH 261 A TIP 262 2 HOH HOH 262 A TIP 263 2 HOH HOH 263 A TIP 264 2 HOH HOH 264 A TIP 265 2 HOH HOH 265 A TIP 266 2 HOH HOH 266 A TIP 267 2 HOH HOH 267 A TIP 268 2 HOH HOH 268 A TIP 269 2 HOH HOH 269 A TIP 270 2 HOH HOH 270 A TIP 271 2 HOH HOH 271 A TIP 272 2 HOH HOH 272 A TIP 273 2 HOH HOH 273 A TIP 274 2 HOH HOH 274 A TIP 275 2 HOH HOH 275 A TIP 276 2 HOH HOH 276 A TIP 277 2 HOH HOH 277 A TIP 278 2 HOH HOH 278 A TIP 279 2 HOH HOH 279 A TIP 280 2 HOH HOH 280 A TIP 281 2 HOH HOH 281 A TIP 282 2 HOH HOH 282 A TIP 283 2 HOH HOH 283 A TIP 284 2 HOH HOH 284 A TIP 285 2 HOH HOH 285 A TIP 286 2 HOH HOH 286 A TIP 287 2 HOH HOH 287 A TIP 288 2 HOH HOH 288 A TIP 289 2 HOH HOH 289 A TIP 290 2 HOH HOH 290 A TIP 291 2 HOH HOH 291 A TIP 292 2 HOH HOH 292 A TIP 293 2 HOH HOH 293 A TIP 294 2 HOH HOH 294 A TIP 295 2 HOH HOH 295 A TIP 296 2 HOH HOH 296 A TIP 297 2 HOH HOH 297 A TIP 298 2 HOH HOH 298 A TIP 299 2 HOH HOH 299 A TIP 300 2 HOH HOH 300 A TIP 301 2 HOH HOH 301 A TIP 302 2 HOH HOH 302 A TIP 303 2 HOH HOH 303 A TIP 304 2 HOH HOH 304 A TIP 305 2 HOH HOH 305 A TIP 306 2 HOH HOH 306 A TIP 307 2 HOH HOH 307 A TIP 308 2 HOH HOH 308 A TIP 309 2 HOH HOH 309 A TIP 310 2 HOH HOH 310 A TIP 311 2 HOH HOH 311 A TIP 312 2 HOH HOH 312 A TIP 313 2 HOH HOH 313 A TIP 314 2 HOH HOH 314 A TIP 315 2 HOH HOH 315 A TIP 316 2 HOH HOH 316 A TIP 317 2 HOH HOH 317 A TIP 318 2 HOH HOH 318 A TIP 319 2 HOH HOH 319 A TIP 320 2 HOH HOH 320 A TIP 321 2 HOH HOH 321 A TIP 322 2 HOH HOH 322 A TIP 323 2 HOH HOH 323 A TIP 324 2 HOH HOH 324 A n 1 -15 A n 2 -14 A n 3 -13 A n 4 -12 A n 5 -11 A n 6 -10 A n 7 -9 A n 8 -8 A n 9 -7 A n 10 -6 A n 11 -5 A n 12 -4 A n 13 -3 A n 14 -2 A n 15 -1 A ALA 0 n 16 ALA 0 A LEU 1 n 17 LEU 1 A TYR 2 n 18 TYR 2 A PHE 3 n 19 PHE 3 A MSE 4 n 20 MSE 4 A GLY 5 n 21 GLY 5 A HIS 6 n 22 HIS 6 A MSE 7 n 23 MSE 7 A ILE 8 n 24 ILE 8 A LEU 9 n 25 LEU 9 A VAL 10 n 26 VAL 10 A TYR 11 n 27 TYR 11 A SER 12 n 28 SER 12 A THR 13 n 29 THR 13 A PHE 14 n 30 PHE 14 A PRO 15 n 31 PRO 15 A ASN 16 n 32 ASN 16 A GLU 17 n 33 GLU 17 A GLU 18 n 34 GLU 18 A LYS 19 n 35 LYS 19 A ALA 20 n 36 ALA 20 A LEU 21 n 37 LEU 21 A GLU 22 n 38 GLU 22 A ILE 23 n 39 ILE 23 A GLY 24 n 40 GLY 24 A ARG 25 n 41 ARG 25 A LYS 26 n 42 LYS 26 A LEU 27 n 43 LEU 27 A LEU 28 n 44 LEU 28 A GLU 29 n 45 GLU 29 A LYS 30 n 46 LYS 30 A ARG 31 n 47 ARG 31 A LEU 32 n 48 LEU 32 A ILE 33 n 49 ILE 33 A ALA 34 n 50 ALA 34 A CYS 35 n 51 CYS 35 A PHE 36 n 52 PHE 36 A ASN 37 n 53 ASN 37 A ALA 38 n 54 ALA 38 A PHE 39 n 55 PHE 39 A GLU 40 n 56 GLU 40 A ILE 41 n 57 ILE 41 A ARG 42 n 58 ARG 42 A SER 43 n 59 SER 43 A GLY 44 n 60 GLY 44 A TYR 45 n 61 TYR 45 A TRP 46 n 62 TRP 46 A TRP 47 n 63 TRP 47 A LYS 48 n 64 LYS 48 A GLY 49 n 65 GLY 49 A GLU 50 n 66 GLU 50 A ILE 51 n 67 ILE 51 A VAL 52 n 68 VAL 52 A GLN 53 n 69 GLN 53 A ASP 54 n 70 ASP 54 A LYS 55 n 71 LYS 55 A GLU 56 n 72 GLU 56 A TRP 57 n 73 TRP 57 A ALA 58 n 74 ALA 58 A ALA 59 n 75 ALA 59 A ILE 60 n 76 ILE 60 A PHE 61 n 77 PHE 61 A LYS 62 n 78 LYS 62 A THR 63 n 79 THR 63 A THR 64 n 80 THR 64 A GLU 65 n 81 GLU 65 A GLU 66 n 82 GLU 66 A LYS 67 n 83 LYS 67 A GLU 68 n 84 GLU 68 A LYS 69 n 85 LYS 69 A GLU 70 n 86 GLU 70 A LEU 71 n 87 LEU 71 A TYR 72 n 88 TYR 72 A GLU 73 n 89 GLU 73 A GLU 74 n 90 GLU 74 A LEU 75 n 91 LEU 75 A ARG 76 n 92 ARG 76 A LYS 77 n 93 LYS 77 A LEU 78 n 94 LEU 78 A HIS 79 n 95 HIS 79 A PRO 80 n 96 PRO 80 A TYR 81 n 97 TYR 81 A GLU 82 n 98 GLU 82 A THR 83 n 99 THR 83 A PRO 84 n 100 PRO 84 A ALA 85 n 101 ALA 85 A ILE 86 n 102 ILE 86 A PHE 87 n 103 PHE 87 A THR 88 n 104 THR 88 A LEU 89 n 105 LEU 89 A LYS 90 n 106 LYS 90 A VAL 91 n 107 VAL 91 A GLU 92 n 108 GLU 92 A ASN 93 n 109 ASN 93 A ILE 94 n 110 ILE 94 A LEU 95 n 111 LEU 95 A THR 96 n 112 THR 96 A GLU 97 n 113 GLU 97 A TYR 98 n 114 TYR 98 A MSE 99 n 115 MSE 99 A ASN 100 n 116 ASN 100 A TRP 101 n 117 TRP 101 A LEU 102 n 118 LEU 102 A ARG 103 n 119 ARG 103 A GLU 104 n 120 GLU 104 A SER 105 n 121 SER 105 A VAL 106 n 122 VAL 106 A LEU 107 n 123 LEU 107 A GLY 108 n 124 GLY 108 A SER 109 n 125 SER 109 A author_and_software_defined_assembly PQS 3 trimeric A MSE 4 SELENOMETHIONINE A MSE 20 MET A MSE 7 SELENOMETHIONINE A MSE 23 MET A MSE 99 SELENOMETHIONINE A MSE 115 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_775 -y+2,x-y+2,z crystal symmetry operation 52.2370000000 90.4771380350 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_575 -x+y,-x+2,z crystal symmetry operation -52.2370000000 90.4771380350 0.0000000000 A N PHE 3 A N PHE 19 A O ILE 94 A O ILE 110 A N PHE 39 A N PHE 55 A O ALA 58 A O ALA 74 A O PHE 61 A O PHE 77 A N VAL 10 A N VAL 26 A N TYR 11 A N TYR 27 A O PHE 87 A O PHE 103 1 A MET -15 A MET 1 1 Y 1 A GLY -14 A GLY 2 1 Y 1 A SER -13 A SER 3 1 Y 1 A SER -12 A SER 4 1 Y 1 A HIS -11 A HIS 5 1 Y 1 A HIS -10 A HIS 6 1 Y 1 A HIS -9 A HIS 7 1 Y 1 A HIS -8 A HIS 8 1 Y 1 A HIS -7 A HIS 9 1 Y 1 A HIS -6 A HIS 10 1 Y 1 A SER -5 A SER 11 1 Y 1 A SER -4 A SER 12 1 Y 1 A GLY -3 A GLY 13 1 Y 1 A ARG -2 A ARG 14 1 Y 1 A GLU -1 A GLU 15 1 Y 1 A A O O HOH HOH 276 276 1.83 1_555 2_675 1 A HIS 6 -140.27 45.00 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM 15.3 -0.67 0.00 0.00 -0.67 0.00 1.34 0.241 0.006 0.218 0.218 1.40 20.68 1571 20453 19451 5.2 74.1 RANDOM 485887.96 485887.96 0.000000 1 RESTRAINED THROUGHOUT 2.0 MAD FLAT MODEL 49.9317 0.389531 0.19 0.17 5.00 0.10 1.40 20.68 125 1055 0 0 930 0.006 1.2 21.8 0.66 0.232 0.018 0.22 1.49 145 2482 6 5.5 38.5 12.6 1.4 50 1KR4 20453 19451 4.0 2.0 0.056 1 24.25 5.49 95.1 0.416 1.40 1.45 1.66 1829 1 4.875 87.7 data scaling d*TREK data reduction HKL-2000 refinement CNS data reduction d*TREK data scaling HKL-2000 phasing CNS Protein of TM1056 from Thermotoga maritima, cutA Structure Genomics, Protein TM1056, cutA 1 N N 2 N N A ASN 16 A ASN 32 HELX_P A LYS 30 A LYS 46 1 1 15 A LYS 67 A LYS 83 HELX_P A HIS 79 A HIS 95 1 2 13 A THR 96 A THR 112 HELX_P A VAL 106 A VAL 122 1 3 11 covale 1.329 A PHE 3 A C PHE 19 1_555 A MSE 4 A N MSE 20 1_555 covale 1.329 A MSE 4 A C MSE 20 1_555 A GLY 5 A N GLY 21 1_555 covale 1.329 A HIS 6 A C HIS 22 1_555 A MSE 7 A N MSE 23 1_555 covale 1.325 A MSE 7 A C MSE 23 1_555 A ILE 8 A N ILE 24 1_555 covale 1.332 A TYR 98 A C TYR 114 1_555 A MSE 99 A N MSE 115 1_555 covale 1.329 A MSE 99 A C MSE 115 1_555 A ASN 100 A N ASN 116 1_555 STRUCTURAL GENOMICS, UNKNOWN FUNCTION cutA, structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION CUTA_THEMA UNP 1 1 Q9X0E6 MILVYSTFPNEEKALEIGRKLLEKRLIACFNAFEIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPAI FTLKVENVLTEYMNWLRESVL 1 101 1KR4 7 107 Q9X0E6 A 1 23 123 1 EXPRESSION TAG MET -15 1KR4 A Q9X0E6 UNP 1 1 EXPRESSION TAG GLY -14 1KR4 A Q9X0E6 UNP 2 1 EXPRESSION TAG SER -13 1KR4 A Q9X0E6 UNP 3 1 EXPRESSION TAG SER -12 1KR4 A Q9X0E6 UNP 4 1 EXPRESSION TAG HIS -11 1KR4 A Q9X0E6 UNP 5 1 EXPRESSION TAG HIS -10 1KR4 A Q9X0E6 UNP 6 1 EXPRESSION TAG HIS -9 1KR4 A Q9X0E6 UNP 7 1 EXPRESSION TAG HIS -8 1KR4 A Q9X0E6 UNP 8 1 EXPRESSION TAG HIS -7 1KR4 A Q9X0E6 UNP 9 1 EXPRESSION TAG HIS -6 1KR4 A Q9X0E6 UNP 10 1 EXPRESSION TAG SER -5 1KR4 A Q9X0E6 UNP 11 1 EXPRESSION TAG SER -4 1KR4 A Q9X0E6 UNP 12 1 EXPRESSION TAG GLY -3 1KR4 A Q9X0E6 UNP 13 1 EXPRESSION TAG ARG -2 1KR4 A Q9X0E6 UNP 14 1 EXPRESSION TAG GLU -1 1KR4 A Q9X0E6 UNP 15 1 EXPRESSION TAG ALA 0 1KR4 A Q9X0E6 UNP 16 1 EXPRESSION TAG LEU 1 1KR4 A Q9X0E6 UNP 17 1 EXPRESSION TAG TYR 2 1KR4 A Q9X0E6 UNP 18 1 EXPRESSION TAG PHE 3 1KR4 A Q9X0E6 UNP 19 1 EXPRESSION TAG MSE 4 1KR4 A Q9X0E6 UNP 20 1 EXPRESSION TAG GLY 5 1KR4 A Q9X0E6 UNP 21 1 EXPRESSION TAG HIS 6 1KR4 A Q9X0E6 UNP 22 1 MET MODIFIED RESIDUE MSE 7 1KR4 A Q9X0E6 UNP 1 23 1 VAL SEE REMARK 999 ILE 94 1KR4 A Q9X0E6 UNP 88 110 1 MET MODIFIED RESIDUE MSE 99 1KR4 A Q9X0E6 UNP 93 115 1 CLONING ARTIFACT GLY 108 1KR4 A Q9X0E6 UNP 124 1 CLONING ARTIFACT SER 109 1KR4 A Q9X0E6 UNP 125 2 4 anti-parallel anti-parallel anti-parallel anti-parallel A TYR 2 A TYR 18 A PHE 3 A PHE 19 A ILE 94 A ILE 110 A LEU 95 A LEU 111 A CYS 35 A CYS 51 A TRP 47 A TRP 63 A GLU 50 A GLU 66 A THR 64 A THR 80 A MSE 7 A MSE 23 A PHE 14 A PHE 30 A ILE 86 A ILE 102 A LEU 89 A LEU 105 143 P 3