1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Bertini, I.
Donaire, A.
Luchinat, C.
Piccioli, M.
Poggi, L.
Parigi, G.
Jimenez, B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
La 3
138.905
LANTHANUM (III) ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
J.Biomol.NMR
JBNME9
0800
0925-2738
21
85
98
10.1023/A:1012422402545
11727989
Paramagnetism-based versus classical constraints: an analysis of the solution structure of Ca Ln calbindin D9k.
2001
10.2210/pdb1ksm/pdb
pdb_00001ksm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8963.168
VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN
P43M
1
man
polymer
138.905
LANTHANUM (III) ION
1
syn
non-polymer
CABP, CALBINDIN D9K
no
no
MSAKKSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ
MSAKKSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
Escherichia
sample
9913
Bos taurus
562
Escherichia coli
database_2
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-01-23
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
2002-01-23
SPRSDE
1kqv is the Family of 30 NMR structures.
RCSB
Y
RCSB
2002-01-14
REL
REL
LA
LANTHANUM (III) ION
minimized average structure
30
1
3D_15N-SEPARATED_NOESY
HNHA
RELAXATION RATES
J -MODULATED HSQC
HNCO
HNCA
HCCH-TOCSY
WATER SOLUTION
6.00
AMBIENT
300.00
K
SIMULATED ANNEALING TORSION ANGLE DYNAMICS
1
minimized average structure
1.5 MM [15N, 13C] - CA LN CALBINDIN, PH 6.0
H20:D2O 90:10
Guentert, P., Mumenthaler, C. and Wuethrich, K
structure solution
DYANA
1.5
Banci, L., Bertini, I., Cremonini, M.A., Gori Savellini, G., Luchinat, C., Wuthrich, K. and Guntert, P.
structure solution
PSEUDYANA
1.5
Banci, L., Bertini, I., Cremonini, M.A., Gori Savellini, G., Luchinat, C., Wuthrich, K. and Guntert, P.
refinement
PSEUDYANA
3.1
500
Bruker
DMX
600
Bruker
AVANCE
800
Bruker
AVANCE
LN
105
2
LA
LA
105
A
n
1
-3
A
n
2
-2
A
n
3
-1
A
n
4
0
A
LYS
1
n
5
LYS
1
A
SER
2
n
6
SER
2
A
PRO
3
n
7
PRO
3
A
GLU
4
n
8
GLU
4
A
GLU
5
n
9
GLU
5
A
LEU
6
n
10
LEU
6
A
LYS
7
n
11
LYS
7
A
GLY
8
n
12
GLY
8
A
ILE
9
n
13
ILE
9
A
PHE
10
n
14
PHE
10
A
GLU
11
n
15
GLU
11
A
LYS
12
n
16
LYS
12
A
TYR
13
n
17
TYR
13
A
ALA
14
n
18
ALA
14
A
ALA
15
n
19
ALA
15
A
LYS
16
n
20
LYS
16
A
GLU
17
n
21
GLU
17
A
GLY
18
n
22
GLY
18
A
ASP
19
n
23
ASP
19
A
PRO
20
n
24
PRO
20
A
ASN
21
n
25
ASN
21
A
GLN
22
n
26
GLN
22
A
LEU
23
n
27
LEU
23
A
SER
24
n
28
SER
24
A
LYS
25
n
29
LYS
25
A
GLU
26
n
30
GLU
26
A
GLU
27
n
31
GLU
27
A
LEU
28
n
32
LEU
28
A
LYS
29
n
33
LYS
29
A
LEU
30
n
34
LEU
30
A
LEU
31
n
35
LEU
31
A
LEU
32
n
36
LEU
32
A
GLN
33
n
37
GLN
33
A
THR
34
n
38
THR
34
A
GLU
35
n
39
GLU
35
A
PHE
36
n
40
PHE
36
A
PRO
37
n
41
PRO
37
A
SER
38
n
42
SER
38
A
LEU
39
n
43
LEU
39
A
LEU
40
n
44
LEU
40
A
LYS
41
n
45
LYS
41
A
GLY
42
n
46
GLY
42
A
MET
43
n
47
MET
43
A
SER
44
n
48
SER
44
A
THR
45
n
49
THR
45
A
LEU
46
n
50
LEU
46
A
ASP
47
n
51
ASP
47
A
GLU
48
n
52
GLU
48
A
LEU
49
n
53
LEU
49
A
PHE
50
n
54
PHE
50
A
GLU
51
n
55
GLU
51
A
GLU
52
n
56
GLU
52
A
LEU
53
n
57
LEU
53
A
ASP
54
n
58
ASP
54
A
LYS
55
n
59
LYS
55
A
ASN
56
n
60
ASN
56
A
GLY
57
n
61
GLY
57
A
ASP
58
n
62
ASP
58
A
GLY
59
n
63
GLY
59
A
GLU
60
n
64
GLU
60
A
VAL
61
n
65
VAL
61
A
SER
62
n
66
SER
62
A
PHE
63
n
67
PHE
63
A
GLU
64
n
68
GLU
64
A
GLU
65
n
69
GLU
65
A
PHE
66
n
70
PHE
66
A
GLN
67
n
71
GLN
67
A
VAL
68
n
72
VAL
68
A
LEU
69
n
73
LEU
69
A
VAL
70
n
74
VAL
70
A
LYS
71
n
75
LYS
71
A
LYS
72
n
76
LYS
72
A
ILE
73
n
77
ILE
73
A
SER
74
n
78
SER
74
A
GLN
75
n
79
GLN
75
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
MET
-3
A
MET
1
1
Y
1
A
SER
-2
A
SER
2
1
Y
1
A
ALA
-1
A
ALA
3
1
Y
1
A
LYS
0
A
LYS
4
1
Y
1
A
A
OD1
HD21
ASP
ASN
19
21
1.52
1
A
A
O
H
SER
LEU
24
28
1.55
1
A
A
O
H
LEU
LEU
49
53
1.59
1
A
PHE
36
-151.48
89.37
1
A
VAL
61
-95.37
55.73
1
A
SER
62
-47.46
162.22
minimized average
AVERAGE NMR SOLUTION STRUCTURE OF CA LN CALBINDIN D9K
1
N
N
2
N
N
A
SER
2
A
SER
6
HELX_P
A
ALA
15
A
ALA
19
1
1
14
A
SER
24
A
SER
28
HELX_P
A
GLU
35
A
GLU
39
1
2
12
A
PRO
37
A
PRO
41
HELX_P
A
GLY
42
A
GLY
46
1
3
6
A
THR
45
A
THR
49
HELX_P
A
ASP
54
A
ASP
58
1
4
10
A
SER
62
A
SER
66
HELX_P
A
GLN
67
A
GLN
71
1
5
6
A
VAL
68
A
VAL
72
HELX_P
A
ILE
73
A
ILE
77
1
6
6
METAL BINDING PROTEIN
LANTHANIDE IONS, CALCIUM-BINDING PROTEIN, PARAMAGNETIC NMR, PSEUDOCONTACT SHIFTS, RESIDUAL DIPOLAR COUPLINGS, METAL BINDING PROTEIN
S100G_BOVIN
UNP
1
0
P02633
MSAKKSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGPSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ
0
78
1KSM
-3
75
P02633
A
1
1
79
1
PRO
engineered mutation
MET
43
1KSM
A
P02633
UNP
46
47
BINDING SITE FOR RESIDUE LA A 105
A
LA
105
Software
5
A
ASP
54
A
ASP
58
5
1_555
A
ASN
56
A
ASN
60
5
1_555
A
ASP
58
A
ASP
62
5
1_555
A
GLU
60
A
GLU
64
5
1_555
A
GLU
65
A
GLU
69
5
1_555
1
P 1