1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Sorimachi, K. Jacks, A.J. Le Gal-Coeffet, M.-F. Williamson, G. Archer, D.B. Williamson, M.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 259 970 987 10.1006/jmbi.1996.0374 8683599 Solution structure of the granular starch binding domain of glucoamylase from Aspergillus niger by nuclear magnetic resonance spectroscopy. 1996 IX Eur.J.Biochem. EJBCAI 0262 0014-2956 233 568 1H and 15N Assignments and Secondary Structure of the Starch-Binding Domain of Glucoamylase from Aspergillus Niger 1995 10.2210/pdb1kul/pdb pdb_00001kul 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 PH 5.2, 313 K 11884.820 GLUCOAMYLASE 3.2.1.3 BINDING DOMAIN, RESIDUES 509 - 616 1 man polymer 1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE no no CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSV EWESDPNREYTVPQACGTSTATVTDTWR CTTPTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSV EWESDPNREYTVPQACGTSTATVTDTWR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Aspergillus AB4.1 Aspergillus sample A. NIGER GLAA 5061 Aspergillus niger A. NIGER GLAA 5061 Aspergillus niger PIGF database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1996-07-11 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1996-01-12 REL REL 100 5 5.2 313 K BRUNGER refinement X-PLOR 3.1 CYS 509 n 1 CYS 509 A THR 510 n 2 THR 510 A THR 511 n 3 THR 511 A PRO 512 n 4 PRO 512 A THR 513 n 5 THR 513 A ALA 514 n 6 ALA 514 A VAL 515 n 7 VAL 515 A ALA 516 n 8 ALA 516 A VAL 517 n 9 VAL 517 A THR 518 n 10 THR 518 A PHE 519 n 11 PHE 519 A ASP 520 n 12 ASP 520 A LEU 521 n 13 LEU 521 A THR 522 n 14 THR 522 A ALA 523 n 15 ALA 523 A THR 524 n 16 THR 524 A THR 525 n 17 THR 525 A THR 526 n 18 THR 526 A TYR 527 n 19 TYR 527 A GLY 528 n 20 GLY 528 A GLU 529 n 21 GLU 529 A ASN 530 n 22 ASN 530 A ILE 531 n 23 ILE 531 A TYR 532 n 24 TYR 532 A LEU 533 n 25 LEU 533 A VAL 534 n 26 VAL 534 A GLY 535 n 27 GLY 535 A SER 536 n 28 SER 536 A ILE 537 n 29 ILE 537 A SER 538 n 30 SER 538 A GLN 539 n 31 GLN 539 A LEU 540 n 32 LEU 540 A GLY 541 n 33 GLY 541 A ASP 542 n 34 ASP 542 A TRP 543 n 35 TRP 543 A GLU 544 n 36 GLU 544 A THR 545 n 37 THR 545 A SER 546 n 38 SER 546 A ASP 547 n 39 ASP 547 A GLY 548 n 40 GLY 548 A ILE 549 n 41 ILE 549 A ALA 550 n 42 ALA 550 A LEU 551 n 43 LEU 551 A SER 552 n 44 SER 552 A ALA 553 n 45 ALA 553 A ASP 554 n 46 ASP 554 A LYS 555 n 47 LYS 555 A TYR 556 n 48 TYR 556 A THR 557 n 49 THR 557 A SER 558 n 50 SER 558 A SER 559 n 51 SER 559 A ASP 560 n 52 ASP 560 A PRO 561 n 53 PRO 561 A LEU 562 n 54 LEU 562 A TRP 563 n 55 TRP 563 A TYR 564 n 56 TYR 564 A VAL 565 n 57 VAL 565 A THR 566 n 58 THR 566 A VAL 567 n 59 VAL 567 A THR 568 n 60 THR 568 A LEU 569 n 61 LEU 569 A PRO 570 n 62 PRO 570 A ALA 571 n 63 ALA 571 A GLY 572 n 64 GLY 572 A GLU 573 n 65 GLU 573 A SER 574 n 66 SER 574 A PHE 575 n 67 PHE 575 A GLU 576 n 68 GLU 576 A TYR 577 n 69 TYR 577 A LYS 578 n 70 LYS 578 A PHE 579 n 71 PHE 579 A ILE 580 n 72 ILE 580 A ARG 581 n 73 ARG 581 A ILE 582 n 74 ILE 582 A GLU 583 n 75 GLU 583 A SER 584 n 76 SER 584 A ASP 585 n 77 ASP 585 A ASP 586 n 78 ASP 586 A SER 587 n 79 SER 587 A VAL 588 n 80 VAL 588 A GLU 589 n 81 GLU 589 A TRP 590 n 82 TRP 590 A GLU 591 n 83 GLU 591 A SER 592 n 84 SER 592 A ASP 593 n 85 ASP 593 A PRO 594 n 86 PRO 594 A ASN 595 n 87 ASN 595 A ARG 596 n 88 ARG 596 A GLU 597 n 89 GLU 597 A TYR 598 n 90 TYR 598 A THR 599 n 91 THR 599 A VAL 600 n 92 VAL 600 A PRO 601 n 93 PRO 601 A GLN 602 n 94 GLN 602 A ALA 603 n 95 ALA 603 A CYS 604 n 96 CYS 604 A GLY 605 n 97 GLY 605 A THR 606 n 98 THR 606 A SER 607 n 99 SER 607 A THR 608 n 100 THR 608 A ALA 609 n 101 ALA 609 A THR 610 n 102 THR 610 A VAL 611 n 103 VAL 611 A THR 612 n 104 THR 612 A ASP 613 n 105 ASP 613 A THR 614 n 106 THR 614 A TRP 615 n 107 TRP 615 A ARG 616 n 108 ARG 616 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ALA 609 A O ALA 101 A N THR 518 A N THR 10 A O VAL 517 A O VAL 9 A N VAL 567 A N VAL 59 A O TYR 564 A O TYR 56 A N SER 552 A N SER 44 A O ILE 549 A O ILE 41 A N LEU 533 A N LEU 25 A O VAL 534 A O VAL 26 A N LYS 578 A N LYS 70 A O ARG 581 A O ARG 73 A N GLU 589 A N GLU 81 A O ALA 609 A O ALA 101 A N THR 518 A N THR 10 A O VAL 517 A O VAL 9 A N VAL 567 A N VAL 59 A O TYR 564 A O TYR 56 A N SER 552 A N SER 44 A O ILE 549 A O ILE 41 A N LEU 533 A N LEU 25 A O VAL 534 A O VAL 26 A N LYS 578 A N LYS 70 A O PHE 575 A O PHE 67 A N TYR 598 A N TYR 90 1 A ARG 581 0.189 SIDE CHAIN 1 A ARG 596 0.252 SIDE CHAIN 1 A ARG 616 0.217 SIDE CHAIN 2 A ARG 581 0.310 SIDE CHAIN 2 A ARG 596 0.292 SIDE CHAIN 2 A ARG 616 0.089 SIDE CHAIN 3 A ARG 581 0.080 SIDE CHAIN 3 A ARG 596 0.256 SIDE CHAIN 3 A ARG 616 0.246 SIDE CHAIN 4 A ARG 581 0.271 SIDE CHAIN 4 A ARG 596 0.116 SIDE CHAIN 4 A ARG 616 0.305 SIDE CHAIN 5 A ARG 581 0.216 SIDE CHAIN 5 A ARG 596 0.313 SIDE CHAIN 5 A ARG 616 0.276 SIDE CHAIN 1 A THR 511 46.60 -169.07 1 A THR 513 -33.49 83.41 1 A LEU 521 -68.42 -177.19 1 A ALA 523 -161.45 119.11 1 A THR 524 -88.98 43.82 1 A THR 526 -143.23 32.80 1 A TYR 527 -82.65 45.64 1 A LEU 540 -89.63 33.03 1 A ASP 542 75.95 -62.68 1 A TRP 543 -175.78 44.17 1 A LEU 551 -103.08 -167.42 1 A ALA 553 -142.51 56.85 1 A THR 557 -143.34 -77.87 1 A SER 558 -133.87 -44.91 1 A SER 559 -69.56 -80.36 1 A TRP 563 -74.10 -168.90 1 A LEU 569 -160.34 78.61 1 A ALA 571 71.61 80.49 1 A GLU 573 -178.04 148.24 1 A PHE 575 -36.45 160.88 1 A GLU 583 -69.85 -172.03 1 A ASP 585 -113.22 -167.42 1 A GLU 591 -25.91 134.17 1 A SER 592 -69.75 -134.79 1 A ASP 593 -91.76 -65.30 1 A ASN 595 -65.21 -150.35 1 A CYS 604 179.40 -150.64 1 A THR 606 -103.62 -143.40 1 A ALA 609 -169.59 -167.26 1 A VAL 611 -171.65 98.19 2 A ALA 523 -161.19 109.19 2 A THR 524 -86.72 43.43 2 A LEU 540 -94.05 34.28 2 A ASP 542 82.20 -65.86 2 A TRP 543 -175.29 45.27 2 A ALA 553 -143.20 58.96 2 A THR 557 -154.11 -55.70 2 A SER 558 -147.27 -51.76 2 A SER 559 -69.44 -81.26 2 A TRP 563 -69.51 -170.50 2 A LEU 569 -156.65 76.77 2 A GLU 573 172.69 145.80 2 A PHE 575 -39.02 170.50 2 A ASP 585 -112.63 -168.08 2 A GLU 591 -28.98 141.65 2 A SER 592 -68.39 -145.29 2 A PRO 601 -76.34 -157.74 2 A GLN 602 -147.28 55.29 2 A CYS 604 -94.79 -72.64 2 A VAL 611 -177.20 109.91 3 A THR 510 -97.35 -135.21 3 A THR 511 -56.92 -171.32 3 A THR 513 -35.66 83.80 3 A THR 524 -90.77 42.16 3 A LEU 533 -169.32 119.25 3 A ASP 542 83.35 -63.15 3 A TRP 543 -174.51 45.07 3 A THR 557 -158.46 53.24 3 A SER 558 82.21 -59.59 3 A TYR 564 154.56 149.59 3 A ALA 571 85.39 6.62 3 A GLU 573 172.20 151.28 3 A PHE 575 -37.18 163.87 3 A ASP 585 -109.34 -167.24 3 A TRP 590 -120.60 -158.74 3 A GLU 591 -15.80 146.71 3 A SER 592 -69.94 -130.95 3 A ASN 595 -67.63 -176.57 3 A SER 607 -156.50 82.51 3 A VAL 611 -169.70 96.55 4 A THR 510 -79.35 -146.73 4 A THR 524 -90.74 42.12 4 A THR 526 -143.81 29.41 4 A TYR 527 -83.14 45.47 4 A SER 538 -38.64 -30.73 4 A LEU 540 -99.77 41.65 4 A ASP 542 82.56 -63.93 4 A TRP 543 -174.86 40.06 4 A THR 557 -142.84 -92.61 4 A SER 559 -69.75 -80.81 4 A TYR 564 158.94 165.24 4 A PRO 570 -65.50 -168.96 4 A PHE 575 -43.10 177.91 4 A GLU 583 -69.88 -172.69 4 A ASP 585 -112.34 -166.57 4 A GLU 591 -32.72 137.47 4 A SER 592 -69.14 -142.45 4 A ASP 593 -91.84 -63.92 4 A ASN 595 -66.10 -159.59 4 A PRO 601 -75.20 -156.54 4 A CYS 604 -132.06 -145.07 4 A THR 606 -88.98 37.26 5 A THR 513 -91.12 43.51 5 A THR 524 -90.90 38.50 5 A THR 525 -59.18 -173.27 5 A LEU 540 -93.06 35.26 5 A ASP 542 82.27 -66.56 5 A TRP 543 -174.95 40.43 5 A LEU 551 -105.87 -168.25 5 A ALA 553 -146.32 58.99 5 A THR 557 -162.55 -52.43 5 A SER 558 -96.41 -140.47 5 A LEU 569 -155.99 83.78 5 A ALA 571 70.24 99.38 5 A GLU 573 171.45 148.21 5 A PHE 575 -50.42 -169.25 5 A ASP 585 -113.14 -162.02 5 A SER 592 -69.54 -142.02 5 A PRO 601 -77.84 -80.76 5 A GLN 602 -160.30 -167.90 5 A CYS 604 57.62 111.92 5 A THR 606 -159.84 58.02 model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 GLUCOAMYLASE, GRANULAR STARCH-BINDING DOMAIN, NMR, 5 STRUCTURES 1 Y N A SER 538 A SER 30 HELX_P A LEU 540 A LEU 32 5 1 3 disulf 2.021 A CYS 509 A SG CYS 1 1_555 A CYS 604 A SG CYS 96 1_555 HYDROLASE HYDROLASE, STARCH BINDING DOMAIN AMYG_ASPNG UNP 1 1 P69328 MSFRSLLALSGLVCTGLANVISKRATLDSWLSNEATVARTAILNNIGADGAWVSGADSGIVVASPSTDNPDYFYTWTRDS GLVLKTLVDLFRNGDTSLLSTIENYISAQAIVQGISNPSGDLSSGAGLGEPKFNVDETAYTGSWGRPQRDGPALRATAMI GFGQWLLDNGYTSTATDIVWPLVRNDLSYVAQYWNQTGYDLWEEVNGSSFFTIAVQHRALVEGSAFATAVGSSCSWCDSQ APEILCYLQSFWTGSFILANFDSSRSGKDANTLLGSIHTFDPEAACDDSTFQPCSPRALANHKEVVDSFRSIYTLNDGLS DSEAVAVGRYPEDTYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEVTDVSLDFFKALYSDAATGTYSSSSSTYSSIVDA VKTFADGFVSIVETHAASNGSMSEQYDKSDGEQLSARDLTWSYAALLTANNRRNSVVPASWGETSASSVPGTCAATSAIG TYSSVTVTSWPSIVATGGTTTTATPTGSGSVTSTSKTTATASKTSTSTSSTSCTTPTAVAVTFDLTATTTYGENIYLVGS ISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESDPNREYTVPQACGTSTATVTDTWR 533 640 1KUL 509 616 P69328 A 1 1 108 7 7 parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 607 A SER 99 A TRP 615 A TRP 107 A THR 513 A THR 5 A ALA 523 A ALA 15 A PRO 561 A PRO 53 A ALA 571 A ALA 63 A ILE 549 A ILE 41 A SER 552 A SER 44 A ASN 530 A ASN 22 A SER 536 A SER 28 A GLU 573 A GLU 65 A ILE 582 A ILE 74 A GLU 589 A GLU 81 A GLU 591 A GLU 83 A SER 607 A SER 99 A TRP 615 A TRP 107 A THR 513 A THR 5 A ALA 523 A ALA 15 A PRO 561 A PRO 53 A ALA 571 A ALA 63 A ILE 549 A ILE 41 A SER 552 A SER 44 A ASN 530 A ASN 22 A SER 536 A SER 28 A GLU 573 A GLU 65 A ILE 582 A ILE 74 A ARG 596 A ARG 88 A VAL 600 A VAL 92 1 P 1