0.019470 0.011241 0.000000 0.000000 0.022482 0.000000 0.000000 0.000000 0.007481 0.00000 0.00000 0.00000 Sanchez, J.F. Hoh, F. Strub, M.P. Aumelas, A. Dumas, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 51.360 51.360 133.677 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 10 1363 1370 10.1016/S0969-2126(02)00859-6 12377122 Structure of the cathelicidin motif of protegrin-3 precursor: structural insights into the activation mechanism of an antimicrobial protein. 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 1 mirrors CCD 2001-09-16 MARRESEARCH mirrors CCD 2001-03-29 MARRESEARCH mirrors MAD M x-ray 1 mirrors SINGLE WAVELENGTH M x-ray 1 0.9791 1.0 0.9793 1.0 0.9717 1.0 0.9881 1.0 BM14 ESRF 0.9791, 0.9793, 0.9717 SYNCHROTRON ESRF BEAMLINE BM14 BM30A ESRF 0.9881 SYNCHROTRON ESRF BEAMLINE BM30A 11322.741 Protegrin-3 Precursor RESIDUES 30-130 1 man polymer 18.015 water 73 nat water no no QALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVG TVTLDQIKDPLDITCNEVQGV QALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVG TVTLDQIKDPLDITCNEVQGV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n pig Sus Escherichia Escherichia coli sample pg3 9823 Sus scrofa 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid pET15B 1 2.25 40.0 VAPOR DIFFUSION, HANGING DROP 3.8 ammonium sulfate, sodium acetate, pH 3.8, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 repository Initial release Version format compliance Version format compliance 1 0 2002-10-09 1 1 2008-04-27 1 2 2011-07-13 RCSB Y RCSB 2002-01-29 REL REL HOH water TIP 300 2 HOH HOH 300 A TIP 301 2 HOH HOH 301 A TIP 302 2 HOH HOH 302 A TIP 303 2 HOH HOH 303 A TIP 304 2 HOH HOH 304 A TIP 305 2 HOH HOH 305 A TIP 306 2 HOH HOH 306 A TIP 307 2 HOH HOH 307 A TIP 308 2 HOH HOH 308 A TIP 309 2 HOH HOH 309 A TIP 310 2 HOH HOH 310 A TIP 311 2 HOH HOH 311 A TIP 312 2 HOH HOH 312 A TIP 313 2 HOH HOH 313 A TIP 314 2 HOH HOH 314 A TIP 315 2 HOH HOH 315 A TIP 316 2 HOH HOH 316 A TIP 318 2 HOH HOH 318 A TIP 319 2 HOH HOH 319 A TIP 320 2 HOH HOH 320 A TIP 321 2 HOH HOH 321 A TIP 322 2 HOH HOH 322 A TIP 323 2 HOH HOH 323 A TIP 324 2 HOH HOH 324 A TIP 325 2 HOH HOH 325 A TIP 326 2 HOH HOH 326 A TIP 327 2 HOH HOH 327 A TIP 328 2 HOH HOH 328 A TIP 329 2 HOH HOH 329 A TIP 330 2 HOH HOH 330 A TIP 331 2 HOH HOH 331 A TIP 332 2 HOH HOH 332 A TIP 333 2 HOH HOH 333 A TIP 334 2 HOH HOH 334 A TIP 335 2 HOH HOH 335 A TIP 336 2 HOH HOH 336 A TIP 337 2 HOH HOH 337 A TIP 338 2 HOH HOH 338 A TIP 339 2 HOH HOH 339 A TIP 340 2 HOH HOH 340 A TIP 341 2 HOH HOH 341 A TIP 342 2 HOH HOH 342 A TIP 344 2 HOH HOH 344 A TIP 345 2 HOH HOH 345 A TIP 347 2 HOH HOH 347 A TIP 348 2 HOH HOH 348 A TIP 349 2 HOH HOH 349 A TIP 350 2 HOH HOH 350 A TIP 351 2 HOH HOH 351 A TIP 352 2 HOH HOH 352 A TIP 353 2 HOH HOH 353 A TIP 354 2 HOH HOH 354 A TIP 355 2 HOH HOH 355 A TIP 356 2 HOH HOH 356 A TIP 357 2 HOH HOH 357 A TIP 358 2 HOH HOH 358 A TIP 359 2 HOH HOH 359 A TIP 360 2 HOH HOH 360 A TIP 361 2 HOH HOH 361 A TIP 362 2 HOH HOH 362 A TIP 363 2 HOH HOH 363 A TIP 364 2 HOH HOH 364 A TIP 365 2 HOH HOH 365 A TIP 366 2 HOH HOH 366 A TIP 367 2 HOH HOH 367 A TIP 368 2 HOH HOH 368 A TIP 369 2 HOH HOH 369 A TIP 370 2 HOH HOH 370 A TIP 371 2 HOH HOH 371 A TIP 372 2 HOH HOH 372 A TIP 375 2 HOH HOH 375 A TIP 376 2 HOH HOH 376 A TIP 377 2 HOH HOH 377 A n 1 30 A ALA 31 n 2 ALA 31 A LEU 32 n 3 LEU 32 A SER 33 n 4 SER 33 A TYR 34 n 5 TYR 34 A ARG 35 n 6 ARG 35 A GLU 36 n 7 GLU 36 A ALA 37 n 8 ALA 37 A VAL 38 n 9 VAL 38 A LEU 39 n 10 LEU 39 A ARG 40 n 11 ARG 40 A ALA 41 n 12 ALA 41 A VAL 42 n 13 VAL 42 A ASP 43 n 14 ASP 43 A ARG 44 n 15 ARG 44 A LEU 45 n 16 LEU 45 A ASN 46 n 17 ASN 46 A GLU 47 n 18 GLU 47 A GLN 48 n 19 GLN 48 A SER 49 n 20 SER 49 A SER 50 n 21 SER 50 A GLU 51 n 22 GLU 51 A ALA 52 n 23 ALA 52 A ASN 53 n 24 ASN 53 A LEU 54 n 25 LEU 54 A TYR 55 n 26 TYR 55 A ARG 56 n 27 ARG 56 A LEU 57 n 28 LEU 57 A LEU 58 n 29 LEU 58 A GLU 59 n 30 GLU 59 A LEU 60 n 31 LEU 60 A ASP 61 n 32 ASP 61 A n 33 62 A n 34 63 A n 35 64 A n 36 65 A n 37 66 A n 38 67 A n 39 68 A n 40 69 A n 41 70 A GLY 71 n 42 GLY 71 A THR 72 n 43 THR 72 A PRO 73 n 44 PRO 73 A LYS 74 n 45 LYS 74 A PRO 75 n 46 PRO 75 A VAL 76 n 47 VAL 76 A SER 77 n 48 SER 77 A PHE 78 n 49 PHE 78 A THR 79 n 50 THR 79 A VAL 80 n 51 VAL 80 A LYS 81 n 52 LYS 81 A GLU 82 n 53 GLU 82 A THR 83 n 54 THR 83 A VAL 84 n 55 VAL 84 A CYS 85 n 56 CYS 85 A PRO 86 n 57 PRO 86 A ARG 87 n 58 ARG 87 A PRO 88 n 59 PRO 88 A THR 89 n 60 THR 89 A ARG 90 n 61 ARG 90 A GLN 91 n 62 GLN 91 A PRO 92 n 63 PRO 92 A PRO 93 n 64 PRO 93 A GLU 94 n 65 GLU 94 A LEU 95 n 66 LEU 95 A CYS 96 n 67 CYS 96 A ASP 97 n 68 ASP 97 A PHE 98 n 69 PHE 98 A LYS 99 n 70 LYS 99 A GLU 100 n 71 GLU 100 A ASN 101 n 72 ASN 101 A GLY 102 n 73 GLY 102 A ARG 103 n 74 ARG 103 A VAL 104 n 75 VAL 104 A LYS 105 n 76 LYS 105 A GLN 106 n 77 GLN 106 A CYS 107 n 78 CYS 107 A VAL 108 n 79 VAL 108 A GLY 109 n 80 GLY 109 A THR 110 n 81 THR 110 A VAL 111 n 82 VAL 111 A THR 112 n 83 THR 112 A LEU 113 n 84 LEU 113 A ASP 114 n 85 ASP 114 A n 86 115 A n 87 116 A n 88 117 A n 89 118 A PRO 119 n 90 PRO 119 A LEU 120 n 91 LEU 120 A ASP 121 n 92 ASP 121 A ILE 122 n 93 ILE 122 A THR 123 n 94 THR 123 A CYS 124 n 95 CYS 124 A ASN 125 n 96 ASN 125 A GLU 126 n 97 GLU 126 A VAL 127 n 98 VAL 127 A GLN 128 n 99 GLN 128 A n 100 129 A n 101 130 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 56 A N ARG 27 A O LYS 81 A O LYS 52 A N PHE 78 A N PHE 49 A O CYS 107 A O CYS 78 A N THR 110 A N THR 81 A O ASP 121 A O ASP 92 1 A GLN 30 A GLN 1 1 Y 1 A GLN 62 A GLN 33 1 Y 1 A PRO 63 A PRO 34 1 Y 1 A PRO 64 A PRO 35 1 Y 1 A LYS 65 A LYS 36 1 Y 1 A ALA 66 A ALA 37 1 Y 1 A ASP 67 A ASP 38 1 Y 1 A GLU 68 A GLU 39 1 Y 1 A ASP 69 A ASP 40 1 Y 1 A PRO 70 A PRO 41 1 Y 1 A GLN 115 A GLN 86 1 Y 1 A ILE 116 A ILE 87 1 Y 1 A LYS 117 A LYS 88 1 Y 1 A ASP 118 A ASP 89 1 Y 1 A GLY 129 A GLY 100 1 Y 1 A VAL 130 A VAL 101 1 Y 1 A ARG 90 -85.28 46.60 1 A LEU 113 -58.74 -0.02 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 37.8 2.09 2.65 0.00 2.09 0.00 -4.18 0.291 0.012 0.229 0.248 0.229 2.19 23.97 568 5360 5360 10.6 91.1 RANDOM 1501596.00 0.000000 1 RESTRAINED THROUGHOUT 0.0 MAD Engh & Huber FLAT MODEL 85.8159 0.415484 0.41 0.27 5.00 0.28 0.16 2.19 23.97 73 741 0 0 668 0.012 1.6 24.3 1.04 0.313 0.031 0.231 2.33 99 790 6 11.1 93.8 31.9 2.19 24.0 1KWI 5386 5360 1.0 0.045 0.045 1,2 12.2 7.60 91.1 2.19 2.29 94.3 data reduction DENZO data scaling SCALEPACK phasing SOLVE model building RESOLVE refinement CNS 1.0 phasing RESOLVE Protegrin-3 Crystal Structure Analysis of the Cathelicidin Motif of Protegrins 1 N N 2 N N A ALA 31 A ALA 2 HELX_P A SER 49 A SER 20 1 1 19 A PRO 92 A PRO 63 HELX_P A CYS 96 A CYS 67 5 2 5 disulf 2.043 A CYS 85 A SG CYS 56 1_555 A CYS 96 A SG CYS 67 1_555 disulf 2.029 A CYS 107 A SG CYS 78 1_555 A CYS 124 A SG CYS 95 1_555 ANTIMICROBIAL PROTEIN protegrin, cathelicidin motif, disulfide, MAD, selenocystine, ANTIMICROBIAL PROTEIN PG3_PIG UNP 1 30 P32196 QALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVG TVTLDQIKDPLDITCNEVQGV 30 130 1KWI 30 130 P32196 A 1 1 101 4 anti-parallel anti-parallel anti-parallel A ASN 53 A ASN 24 A LEU 60 A LEU 31 A LYS 74 A LYS 45 A PRO 86 A PRO 57 A VAL 104 A VAL 75 A VAL 111 A VAL 82 A ASP 121 A ASP 92 A GLU 126 A GLU 97 179 P 65 2 2