0.017544
0.000000
0.000000
0.000000
0.017544
0.000000
0.000000
0.000000
0.009099
0.00000
0.00000
0.00000
Choi, H.-K.
Rossmann, M.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
57.000
57.000
109.900
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
S
C
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
N
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
S
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
O
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
R
C
N
292
N
O
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
N
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
Y
233
N
doub
Y
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
doub
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
doub
Y
303
N
sing
Y
304
N
sing
N
305
N
sing
Y
306
N
doub
Y
307
N
sing
Y
308
N
sing
N
309
N
sing
Y
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
262
151
167
10.1006/jmbi.1996.0505
8831786
Structural analysis of Sindbis virus capsid mutants involving assembly and catalysis.
1996
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
230
228
Refined Structure of Sindbis Virus Core Protein and Comparison with Other Chymotrypsin-Like Serine Proteinase Structures
1993
DK
Acta Crystallogr.,Sect.A
ACACEQ
0621
0108-7673
48
430
The Structure Determination of Sindbis Virus Core Protein Using Isomorphous Replacement and Molecular Replacement Averaging between Two Crystal Forms
1992
UK
Nature
NATUAS
0006
0028-0836
354
37
Structure of Sindbis Virus Core Protein Reveals a Chymotrypsin-Like Serine Proteinase and the Organization of the Virion
1991
10.2210/pdb1kxb/pdb
pdb_00001kxb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
1994-09-23
SIEMENS
M
x-ray
1
1.5418
1.0
1.5418
17402.680
SINDBIS VIRUS CAPSID PROTEIN
3.4.21.-
MET 106 - ALA 264 OF THE NATIVE SINDBIS CAPSID
S215A
1
man
polymer
no
no
MALKLEADRLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHP
EGFYNWHHGAVQYSGGRFTIPRGVGGRGDAGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW
MALKLEADRLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHP
EGFYNWHHGAVQYSGGRFTIPRGVGGRGDAGRPIMDNSGRVVAIVLGGADEGTRTALSVVTWNSKGKTIKTTPEGTEEW
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Alphavirus
Escherichia
sample
T7 RNA POLYMERASE
SINDBIS VIRUS CAPSID PROTEIN
11034
Sindbis virus
SINDBIS VIRUS CAPSID PROTEIN
562
Escherichia coli
T7
PET11A
2.56
53.
database_2
pdbx_database_status
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Other
Data collection
1
0
1996-11-08
1
1
2008-03-24
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
Y
BNL
1996-05-05
REL
REL
n
1
106
A
ALA
107
n
2
ALA
107
A
LEU
108
n
3
LEU
108
A
LYS
109
n
4
LYS
109
A
LEU
110
n
5
LEU
110
A
GLU
111
n
6
GLU
111
A
ALA
112
n
7
ALA
112
A
ASP
113
n
8
ASP
113
A
ARG
114
n
9
ARG
114
A
LEU
115
n
10
LEU
115
A
PHE
116
n
11
PHE
116
A
ASP
117
n
12
ASP
117
A
VAL
118
n
13
VAL
118
A
LYS
119
n
14
LYS
119
A
ASN
120
n
15
ASN
120
A
GLU
121
n
16
GLU
121
A
ASP
122
n
17
ASP
122
A
GLY
123
n
18
GLY
123
A
ASP
124
n
19
ASP
124
A
VAL
125
n
20
VAL
125
A
ILE
126
n
21
ILE
126
A
GLY
127
n
22
GLY
127
A
HIS
128
n
23
HIS
128
A
ALA
129
n
24
ALA
129
A
LEU
130
n
25
LEU
130
A
ALA
131
n
26
ALA
131
A
MET
132
n
27
MET
132
A
GLU
133
n
28
GLU
133
A
GLY
134
n
29
GLY
134
A
LYS
135
n
30
LYS
135
A
VAL
136
n
31
VAL
136
A
MET
137
n
32
MET
137
A
LYS
138
n
33
LYS
138
A
PRO
139
n
34
PRO
139
A
LEU
140
n
35
LEU
140
A
HIS
141
n
36
HIS
141
A
VAL
142
n
37
VAL
142
A
LYS
143
n
38
LYS
143
A
GLY
144
n
39
GLY
144
A
THR
145
n
40
THR
145
A
ILE
146
n
41
ILE
146
A
ASP
147
n
42
ASP
147
A
HIS
148
n
43
HIS
148
A
PRO
149
n
44
PRO
149
A
VAL
150
n
45
VAL
150
A
LEU
151
n
46
LEU
151
A
SER
152
n
47
SER
152
A
LYS
153
n
48
LYS
153
A
LEU
154
n
49
LEU
154
A
LYS
155
n
50
LYS
155
A
PHE
156
n
51
PHE
156
A
THR
157
n
52
THR
157
A
LYS
158
n
53
LYS
158
A
SER
159
n
54
SER
159
A
SER
160
n
55
SER
160
A
ALA
161
n
56
ALA
161
A
TYR
162
n
57
TYR
162
A
ASP
163
n
58
ASP
163
A
MET
164
n
59
MET
164
A
GLU
165
n
60
GLU
165
A
PHE
166
n
61
PHE
166
A
ALA
167
n
62
ALA
167
A
GLN
168
n
63
GLN
168
A
LEU
169
n
64
LEU
169
A
PRO
170
n
65
PRO
170
A
VAL
171
n
66
VAL
171
A
ASN
172
n
67
ASN
172
A
MET
173
n
68
MET
173
A
ARG
174
n
69
ARG
174
A
SER
175
n
70
SER
175
A
GLU
176
n
71
GLU
176
A
ALA
177
n
72
ALA
177
A
PHE
178
n
73
PHE
178
A
THR
179
n
74
THR
179
A
TYR
180
n
75
TYR
180
A
THR
181
n
76
THR
181
A
SER
182
n
77
SER
182
A
GLU
183
n
78
GLU
183
A
HIS
184
n
79
HIS
184
A
PRO
185
n
80
PRO
185
A
GLU
186
n
81
GLU
186
A
GLY
187
n
82
GLY
187
A
PHE
188
n
83
PHE
188
A
TYR
189
n
84
TYR
189
A
ASN
190
n
85
ASN
190
A
TRP
191
n
86
TRP
191
A
HIS
192
n
87
HIS
192
A
HIS
193
n
88
HIS
193
A
GLY
194
n
89
GLY
194
A
ALA
195
n
90
ALA
195
A
VAL
196
n
91
VAL
196
A
GLN
197
n
92
GLN
197
A
TYR
198
n
93
TYR
198
A
SER
199
n
94
SER
199
A
GLY
200
n
95
GLY
200
A
GLY
201
n
96
GLY
201
A
ARG
202
n
97
ARG
202
A
PHE
203
n
98
PHE
203
A
THR
204
n
99
THR
204
A
ILE
205
n
100
ILE
205
A
PRO
206
n
101
PRO
206
A
ARG
207
n
102
ARG
207
A
GLY
208
n
103
GLY
208
A
VAL
209
n
104
VAL
209
A
GLY
210
n
105
GLY
210
A
GLY
211
n
106
GLY
211
A
ARG
212
n
107
ARG
212
A
GLY
213
n
108
GLY
213
A
ASP
214
n
109
ASP
214
A
ALA
215
n
110
ALA
215
A
GLY
216
n
111
GLY
216
A
ARG
217
n
112
ARG
217
A
PRO
218
n
113
PRO
218
A
ILE
219
n
114
ILE
219
A
MET
220
n
115
MET
220
A
ASP
221
n
116
ASP
221
A
ASN
222
n
117
ASN
222
A
SER
223
n
118
SER
223
A
GLY
224
n
119
GLY
224
A
ARG
225
n
120
ARG
225
A
VAL
226
n
121
VAL
226
A
VAL
227
n
122
VAL
227
A
ALA
228
n
123
ALA
228
A
ILE
229
n
124
ILE
229
A
VAL
230
n
125
VAL
230
A
LEU
231
n
126
LEU
231
A
GLY
232
n
127
GLY
232
A
GLY
233
n
128
GLY
233
A
ALA
234
n
129
ALA
234
A
ASP
235
n
130
ASP
235
A
GLU
236
n
131
GLU
236
A
GLY
237
n
132
GLY
237
A
THR
238
n
133
THR
238
A
ARG
239
n
134
ARG
239
A
THR
240
n
135
THR
240
A
ALA
241
n
136
ALA
241
A
LEU
242
n
137
LEU
242
A
SER
243
n
138
SER
243
A
VAL
244
n
139
VAL
244
A
VAL
245
n
140
VAL
245
A
THR
246
n
141
THR
246
A
TRP
247
n
142
TRP
247
A
ASN
248
n
143
ASN
248
A
SER
249
n
144
SER
249
A
LYS
250
n
145
LYS
250
A
GLY
251
n
146
GLY
251
A
LYS
252
n
147
LYS
252
A
THR
253
n
148
THR
253
A
ILE
254
n
149
ILE
254
A
LYS
255
n
150
LYS
255
A
THR
256
n
151
THR
256
A
THR
257
n
152
THR
257
A
PRO
258
n
153
PRO
258
A
GLU
259
n
154
GLU
259
A
GLY
260
n
155
GLY
260
A
THR
261
n
156
THR
261
A
GLU
262
n
157
GLU
262
A
GLU
263
n
158
GLU
263
A
TRP
264
n
159
TRP
264
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
MET
106
A
MET
1
1
Y
1
A
ASP
147
-67.44
67.57
21.6
0.1840000
0.1840000
2.9
6.0
3462
1
1.0
2.9
6.0
0
1215
0
0
1215
0.010
1.7
1KXB
4335
1.
0.0480000
1
2.66
91.9
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
XDS
phasing
X-PLOR
3.1
SINDBIS VIRUS CAPSID (S215A MUTANT), TETRAGONAL CRYSTAL FORM
1
N
N
A
LEU
151
A
LEU
46
HELX_P
A
LYS
153
A
LYS
48
5
1
3
VIRAL PROTEIN
SINDBIS VIRUS CAPSID PROTEIN, CHYMOTRYPSIN-LIKE SERINE PROTEINASE, WILD TYPE, COAT PROTEIN, Viral protein
POLS_SINDV
UNP
1
1
P03316
MNRGFFNMLGRRPFPAPTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQPPRPRPPPRQKKQAPKQPP
KPKKPKTQEKKKKQPAKPKPGKRQRMALKLEADRLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSKLKFTKSS
AYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHHGAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGGADEGTRT
ALSVVTWNSKGKTIKTTPEGTEEWSAAPLVTAMCLLGNVSFPCDRPPTCYTREPSRALDILEENVNHEAYDTLLNAILRC
GSSGRSKRSVIDDFTLTSPYLGTCSYCHHTVPCFSPVKIEQVWDEADDNTIRIQTSAQFGYDQSGAASANKYRYMSLKQD
HTVKEGTMDDIKISTSGPCRRLSYKGYFLLAKCPPGDSVTVSIVSSNSATSCTLARKIKPKFVGREKYDLPPVHGKKIPC
TVYDRLKETTAGYITMHRPRPHAYTSYLEESSGKVYAKPPSGKNITYECKCGDYKTGTVSTRTEITGCTAIKQCVAYKSD
QTKWVFNSPDLIRHDDHTAQGKLHLPFKLIPSTCMVPVAHAPNVIHGFKHISLQLDTDHLTLLTTRRLGANPEPTTEWIV
GKTVRNFTVDRDGLEYIWGNHEPVRVYAQESAPGDPHGWPHEIVQHYYHRHPVYTILAVASATVAMMIGVTVAVLCACKA
RRECLTPYALAPNAVIPTSLALLCCVRSANAETFTETMSYLWSNSQPFFWVQLCIPLAAFIVLMRCCSCCLPFLVVAGAY
LAKVDAYEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLPSTNQEYITCKFTTVVPSPKIKCCGSLECQPAAHA
DYTCKVFGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQAIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPG
TSKDLKVIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAFGDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYT
QASSGFEMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISIDIPNAAFIRTSDAPLVSTVKCEVSECTYSADFGG
MATLQYVSDREGQCPVHSHSSTATLQESTVHVLEKGAVTVHFSTASPQANFIVSLCGKKTTCNAECKPPADHIVSTPHKN
DQEFQAAISKTSWSWLFALFGGASSLLIIGLMIFACSMMLTSTRR
106
264
1KXB
106
264
P03316
A
1
1
159
1
SER
engineered mutation
ALA
215
1KXB
A
P03316
UNP
215
110
6
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
115
A
LEU
10
A
LYS
119
A
LYS
14
A
VAL
125
A
VAL
20
A
MET
132
A
MET
27
A
LYS
135
A
LYS
30
A
PRO
139
A
PRO
34
A
THR
145
A
THR
40
A
ILE
146
A
ILE
41
A
THR
157
A
THR
52
A
SER
159
A
SER
54
A
MET
164
A
MET
59
A
GLN
168
A
GLN
63
A
GLY
187
A
GLY
82
A
TRP
191
A
TRP
86
A
GLY
194
A
GLY
89
A
SER
199
A
SER
94
A
ARG
202
A
ARG
97
A
PRO
206
A
PRO
101
A
PRO
218
A
PRO
113
A
MET
220
A
MET
115
A
VAL
226
A
VAL
121
A
GLU
236
A
GLU
131
A
ARG
239
A
ARG
134
A
TRP
247
A
TRP
142
A
THR
253
A
THR
148
A
THR
256
A
THR
151
A
GLU
262
A
GLU
157
A
GLU
263
A
GLU
158
SINDBIS CAPSID PROTEIN HAS THE CATALYTIC TRIAD OF THE SERINE PROTEINASE. THE RESIDUES ARE SER 215, HIS 141, AND ASP 163 IN THE WILD-TYPE. IN THIS MUTANT STRUCTURE, THE ACTIVE SITE SER 215 WAS MUTATED TO ALA TO PREVENT AUTO-CATALYTIC CLEAVAGE BETWEEN TRP 264 AND SER 265.
Unknown
3
A
ALA
215
A
ALA
110
3
1_555
A
HIS
141
A
HIS
36
3
1_555
A
ASP
163
A
ASP
58
3
1_555
96
P 43 21 2