1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Katragadda, M.
Alderfer, J.L.
Yeagle, P.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
S
C
N
128
N
C
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
N
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
S
N
199
N
C
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
C
Y
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
O
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
R
C
N
271
N
O
N
272
N
C
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
N
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
N
339
N
C
N
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
Y
212
N
doub
Y
213
N
sing
Y
214
N
sing
N
215
N
sing
Y
216
N
doub
N
217
N
sing
Y
218
N
doub
N
219
N
sing
Y
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
Y
281
N
doub
Y
282
N
sing
Y
283
N
sing
N
284
N
sing
Y
285
N
doub
Y
286
N
sing
Y
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
N
291
N
sing
Y
292
N
doub
N
293
N
sing
Y
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
Y
309
N
doub
Y
310
N
sing
Y
311
N
sing
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
US
Biophys.J.
BIOJAU
0030
0006-3495
81
1029
1036
11463644
Assembly of a polytopic membrane protein structure from the solution structures of overlapping peptide fragments of bacteriorhodopsin.
2001
10.2210/pdb1l0m/pdb
pdb_00001l0m
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
23256.477
Bacteriorhodopsin
part of helix G absent
1
syn
polymer
no
no
RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADW
LFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPE
VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVG
RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADW
LFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPE
VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Data collection
1
0
2002-03-27
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
1
4
2024-05-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
RCSB
Y
RCSB
2002-02-11
REL
REL
The peptide, corresponding to different secondary structure elements, was chemically synthesized. The sequence of this peptide is naturally found in Halobacterium halobium.
sample
1
2D NOESY
DQF-COSY
TOCSY
6
1
atm
293
K
simulated annealing
refined using molecular dynamics
chmeically synthesized peptides
DMSO
data analysis
Felix
97.1
processing
DIANA
structure solution
SYBYL
6.6
refinement
SYBYL
6.6
600
Bruker
AMX
ARG
7
n
1
ARG
7
A
PRO
8
n
2
PRO
8
A
GLU
9
n
3
GLU
9
A
TRP
10
n
4
TRP
10
A
ILE
11
n
5
ILE
11
A
TRP
12
n
6
TRP
12
A
LEU
13
n
7
LEU
13
A
ALA
14
n
8
ALA
14
A
LEU
15
n
9
LEU
15
A
GLY
16
n
10
GLY
16
A
THR
17
n
11
THR
17
A
ALA
18
n
12
ALA
18
A
LEU
19
n
13
LEU
19
A
MET
20
n
14
MET
20
A
GLY
21
n
15
GLY
21
A
LEU
22
n
16
LEU
22
A
GLY
23
n
17
GLY
23
A
THR
24
n
18
THR
24
A
LEU
25
n
19
LEU
25
A
TYR
26
n
20
TYR
26
A
PHE
27
n
21
PHE
27
A
LEU
28
n
22
LEU
28
A
VAL
29
n
23
VAL
29
A
LYS
30
n
24
LYS
30
A
GLY
31
n
25
GLY
31
A
MET
32
n
26
MET
32
A
GLY
33
n
27
GLY
33
A
VAL
34
n
28
VAL
34
A
SER
35
n
29
SER
35
A
ASP
36
n
30
ASP
36
A
PRO
37
n
31
PRO
37
A
ASP
38
n
32
ASP
38
A
ALA
39
n
33
ALA
39
A
LYS
40
n
34
LYS
40
A
LYS
41
n
35
LYS
41
A
PHE
42
n
36
PHE
42
A
TYR
43
n
37
TYR
43
A
ALA
44
n
38
ALA
44
A
ILE
45
n
39
ILE
45
A
THR
46
n
40
THR
46
A
THR
47
n
41
THR
47
A
LEU
48
n
42
LEU
48
A
VAL
49
n
43
VAL
49
A
PRO
50
n
44
PRO
50
A
ALA
51
n
45
ALA
51
A
ILE
52
n
46
ILE
52
A
ALA
53
n
47
ALA
53
A
PHE
54
n
48
PHE
54
A
THR
55
n
49
THR
55
A
MET
56
n
50
MET
56
A
TYR
57
n
51
TYR
57
A
LEU
58
n
52
LEU
58
A
SER
59
n
53
SER
59
A
MET
60
n
54
MET
60
A
LEU
61
n
55
LEU
61
A
LEU
62
n
56
LEU
62
A
GLY
63
n
57
GLY
63
A
TYR
64
n
58
TYR
64
A
GLY
65
n
59
GLY
65
A
LEU
66
n
60
LEU
66
A
THR
67
n
61
THR
67
A
MET
68
n
62
MET
68
A
VAL
69
n
63
VAL
69
A
PRO
70
n
64
PRO
70
A
PHE
71
n
65
PHE
71
A
GLY
72
n
66
GLY
72
A
GLY
73
n
67
GLY
73
A
GLU
74
n
68
GLU
74
A
GLN
75
n
69
GLN
75
A
ASN
76
n
70
ASN
76
A
PRO
77
n
71
PRO
77
A
ILE
78
n
72
ILE
78
A
TYR
79
n
73
TYR
79
A
TRP
80
n
74
TRP
80
A
ALA
81
n
75
ALA
81
A
ARG
82
n
76
ARG
82
A
TYR
83
n
77
TYR
83
A
ALA
84
n
78
ALA
84
A
ASP
85
n
79
ASP
85
A
TRP
86
n
80
TRP
86
A
LEU
87
n
81
LEU
87
A
PHE
88
n
82
PHE
88
A
THR
89
n
83
THR
89
A
THR
90
n
84
THR
90
A
PRO
91
n
85
PRO
91
A
LEU
92
n
86
LEU
92
A
LEU
93
n
87
LEU
93
A
LEU
94
n
88
LEU
94
A
LEU
95
n
89
LEU
95
A
ASP
96
n
90
ASP
96
A
LEU
97
n
91
LEU
97
A
ALA
98
n
92
ALA
98
A
LEU
99
n
93
LEU
99
A
LEU
100
n
94
LEU
100
A
VAL
101
n
95
VAL
101
A
ASP
102
n
96
ASP
102
A
ALA
103
n
97
ALA
103
A
ASP
104
n
98
ASP
104
A
GLN
105
n
99
GLN
105
A
GLY
106
n
100
GLY
106
A
THR
107
n
101
THR
107
A
ILE
108
n
102
ILE
108
A
LEU
109
n
103
LEU
109
A
ALA
110
n
104
ALA
110
A
LEU
111
n
105
LEU
111
A
VAL
112
n
106
VAL
112
A
GLY
113
n
107
GLY
113
A
ALA
114
n
108
ALA
114
A
ASP
115
n
109
ASP
115
A
GLY
116
n
110
GLY
116
A
ILE
117
n
111
ILE
117
A
MET
118
n
112
MET
118
A
ILE
119
n
113
ILE
119
A
GLY
120
n
114
GLY
120
A
THR
121
n
115
THR
121
A
GLY
122
n
116
GLY
122
A
LEU
123
n
117
LEU
123
A
VAL
124
n
118
VAL
124
A
GLY
125
n
119
GLY
125
A
ALA
126
n
120
ALA
126
A
LEU
127
n
121
LEU
127
A
THR
128
n
122
THR
128
A
LYS
129
n
123
LYS
129
A
VAL
130
n
124
VAL
130
A
TYR
131
n
125
TYR
131
A
SER
132
n
126
SER
132
A
TYR
133
n
127
TYR
133
A
ARG
134
n
128
ARG
134
A
PHE
135
n
129
PHE
135
A
VAL
136
n
130
VAL
136
A
TRP
137
n
131
TRP
137
A
TRP
138
n
132
TRP
138
A
ALA
139
n
133
ALA
139
A
ILE
140
n
134
ILE
140
A
SER
141
n
135
SER
141
A
THR
142
n
136
THR
142
A
ALA
143
n
137
ALA
143
A
ALA
144
n
138
ALA
144
A
MET
145
n
139
MET
145
A
LEU
146
n
140
LEU
146
A
TYR
147
n
141
TYR
147
A
ILE
148
n
142
ILE
148
A
LEU
149
n
143
LEU
149
A
TYR
150
n
144
TYR
150
A
VAL
151
n
145
VAL
151
A
LEU
152
n
146
LEU
152
A
PHE
153
n
147
PHE
153
A
PHE
154
n
148
PHE
154
A
GLY
155
n
149
GLY
155
A
PHE
156
n
150
PHE
156
A
THR
157
n
151
THR
157
A
SER
158
n
152
SER
158
A
LYS
159
n
153
LYS
159
A
ALA
160
n
154
ALA
160
A
GLU
161
n
155
GLU
161
A
SER
162
n
156
SER
162
A
MET
163
n
157
MET
163
A
ARG
164
n
158
ARG
164
A
PRO
165
n
159
PRO
165
A
GLU
166
n
160
GLU
166
A
VAL
167
n
161
VAL
167
A
ALA
168
n
162
ALA
168
A
SER
169
n
163
SER
169
A
THR
170
n
164
THR
170
A
PHE
171
n
165
PHE
171
A
LYS
172
n
166
LYS
172
A
VAL
173
n
167
VAL
173
A
LEU
174
n
168
LEU
174
A
ARG
175
n
169
ARG
175
A
ASN
176
n
170
ASN
176
A
VAL
177
n
171
VAL
177
A
THR
178
n
172
THR
178
A
VAL
179
n
173
VAL
179
A
VAL
180
n
174
VAL
180
A
LEU
181
n
175
LEU
181
A
TRP
182
n
176
TRP
182
A
SER
183
n
177
SER
183
A
ALA
184
n
178
ALA
184
A
TYR
185
n
179
TYR
185
A
PRO
186
n
180
PRO
186
A
VAL
187
n
181
VAL
187
A
VAL
188
n
182
VAL
188
A
TRP
189
n
183
TRP
189
A
LEU
190
n
184
LEU
190
A
ILE
191
n
185
ILE
191
A
GLY
192
n
186
GLY
192
A
SER
193
n
187
SER
193
A
GLU
194
n
188
GLU
194
A
GLY
195
n
189
GLY
195
A
ALA
196
n
190
ALA
196
A
GLY
197
n
191
GLY
197
A
ILE
198
n
192
ILE
198
A
VAL
199
n
193
VAL
199
A
PRO
200
n
194
PRO
200
A
LEU
201
n
195
LEU
201
A
ASN
202
n
196
ASN
202
A
ILE
203
n
197
ILE
203
A
GLU
204
n
198
GLU
204
A
THR
205
n
199
THR
205
A
LEU
206
n
200
LEU
206
A
LEU
207
n
201
LEU
207
A
PHE
208
n
202
PHE
208
A
MET
209
n
203
MET
209
A
VAL
210
n
204
VAL
210
A
LEU
211
n
205
LEU
211
A
ASP
212
n
206
ASP
212
A
VAL
213
n
207
VAL
213
A
SER
214
n
208
SER
214
A
ALA
215
n
209
ALA
215
A
LYS
216
n
210
LYS
216
A
VAL
217
n
211
VAL
217
A
GLY
218
n
212
GLY
218
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
NE1
CD2
TRP
TYR
182
185
2.19
1
A
A
LEU
GLY
15
16
-148.88
1
A
A
MET
GLY
20
21
136.68
1
A
A
LEU
GLY
22
23
139.66
1
A
A
THR
LEU
24
25
147.74
1
A
A
PHE
LEU
27
28
30.70
1
A
A
LEU
VAL
28
29
131.84
1
A
A
VAL
LYS
29
30
138.37
1
A
A
LYS
GLY
30
31
135.05
1
A
A
PRO
ASP
37
38
133.46
1
A
A
LYS
LYS
40
41
-123.43
1
A
A
TYR
ALA
43
44
-97.11
1
A
A
ILE
THR
45
46
-126.46
1
A
A
THR
THR
46
47
59.54
1
A
A
MET
TYR
56
57
-138.53
1
A
A
MET
LEU
60
61
148.60
1
A
A
LEU
GLY
62
63
-38.78
1
A
A
PRO
ILE
77
78
142.80
1
A
A
TYR
TRP
79
80
129.74
1
A
A
ALA
ARG
81
82
-50.17
1
A
A
THR
THR
89
90
79.54
1
A
A
PRO
LEU
91
92
149.16
1
A
A
ASP
LEU
96
97
97.72
1
A
A
ALA
LEU
98
99
132.74
1
A
A
LEU
VAL
100
101
50.23
1
A
A
ASP
GLN
104
105
147.52
1
A
A
GLY
THR
106
107
-139.30
1
A
A
THR
ILE
107
108
143.31
1
A
A
VAL
GLY
124
125
-143.28
1
A
A
VAL
TYR
130
131
-91.92
1
A
A
SER
TYR
132
133
-63.61
1
A
A
VAL
TRP
136
137
141.01
1
A
A
THR
ALA
142
143
141.07
1
A
A
TYR
VAL
150
151
147.51
1
A
A
PHE
PHE
153
154
148.81
1
A
A
PHE
GLY
154
155
146.65
1
A
A
GLY
PHE
155
156
-48.35
1
A
A
PHE
THR
156
157
141.95
1
A
A
ARG
PRO
164
165
144.89
1
A
A
GLU
VAL
166
167
-121.71
1
A
A
TRP
SER
182
183
133.08
1
A
A
TRP
LEU
189
190
135.87
1
A
A
ILE
VAL
198
199
-135.71
1
A
A
ILE
GLU
203
204
136.19
1
A
TYR
26
0.196
SIDE CHAIN
1
A
PHE
27
0.174
SIDE CHAIN
1
A
PHE
42
0.159
SIDE CHAIN
1
A
TYR
43
0.092
SIDE CHAIN
1
A
TYR
64
0.082
SIDE CHAIN
1
A
TYR
79
0.101
SIDE CHAIN
1
A
ARG
82
0.131
SIDE CHAIN
1
A
PHE
88
0.122
SIDE CHAIN
1
A
TYR
131
0.157
SIDE CHAIN
1
A
TYR
133
0.098
SIDE CHAIN
1
A
TYR
150
0.071
SIDE CHAIN
1
A
PHE
156
0.144
SIDE CHAIN
1
A
ARG
164
0.089
SIDE CHAIN
1
A
TYR
185
0.262
SIDE CHAIN
1
A
PHE
208
0.147
SIDE CHAIN
1
12.30
1.70
111.00
123.30
A
A
A
CB
CG
CD1
LEU
LEU
LEU
28
28
28
N
1
12.26
1.50
110.10
122.36
A
A
A
CB
CA
C
ALA
ALA
ALA
39
39
39
N
1
12.57
2.00
110.90
123.47
A
A
A
CA
CB
CG2
ILE
ILE
ILE
52
52
52
N
1
-3.16
0.50
120.30
117.14
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
82
82
82
N
1
16.15
2.50
121.70
137.85
A
A
A
C
N
CA
LEU
PHE
PHE
87
88
88
Y
1
-13.05
2.10
128.40
115.35
A
A
A
C
N
CD
THR
PRO
PRO
90
91
91
Y
1
18.61
2.50
121.70
140.31
A
A
A
C
N
CA
LEU
ASP
ASP
95
96
96
Y
1
11.23
1.50
110.90
122.13
A
A
A
CA
CB
CG1
VAL
VAL
VAL
124
124
124
N
1
-4.39
0.60
121.00
116.61
A
A
A
CB
CG
CD2
TYR
TYR
TYR
131
131
131
N
1
14.62
1.90
110.10
124.72
A
A
A
CB
CA
C
SER
SER
SER
132
132
132
N
1
14.27
2.00
110.40
124.67
A
A
A
CB
CA
C
TYR
TYR
TYR
133
133
133
N
1
14.77
1.90
113.40
128.17
A
A
A
CA
CB
CG
TYR
TYR
TYR
133
133
133
N
1
20.39
2.50
121.70
142.09
A
A
A
C
N
CA
ARG
PHE
PHE
134
135
135
Y
1
-7.19
0.70
120.80
113.61
A
A
A
CB
CG
CD2
PHE
PHE
PHE
156
156
156
N
1
7.40
1.10
130.40
137.80
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
182
182
182
N
1
-7.56
1.20
122.30
114.74
A
A
A
CD2
CE2
CZ2
TRP
TRP
TRP
182
182
182
N
1
16.79
1.90
113.40
130.19
A
A
A
CA
CB
CG
TYR
TYR
TYR
185
185
185
N
1
5.09
0.60
121.00
126.09
A
A
A
CB
CG
CD2
TYR
TYR
TYR
185
185
185
N
1
-8.22
0.60
121.00
112.78
A
A
A
CB
CG
CD1
TYR
TYR
TYR
185
185
185
N
1
-19.68
0.80
121.30
101.62
A
A
A
CG
CD2
CE2
TYR
TYR
TYR
185
185
185
N
1
-6.57
0.70
120.80
114.23
A
A
A
CB
CG
CD2
PHE
PHE
PHE
208
208
208
N
1
A
A
CG
CD2
TRP
TRP
182
182
0.523
0.017
1.432
1.955
N
1
A
A
CG
CD1
TRP
TRP
182
182
0.366
0.014
1.363
1.729
N
1
A
A
CD1
NE1
TRP
TRP
182
182
0.526
0.017
1.375
1.901
N
1
A
A
NE1
CE2
TRP
TRP
182
182
0.569
0.013
1.371
1.940
N
1
A
A
CE2
CD2
TRP
TRP
182
182
0.448
0.012
1.409
1.857
N
1
A
A
CG
CD2
TYR
TYR
185
185
0.080
0.013
1.387
1.467
N
1
A
PRO
8
-39.91
130.58
1
A
ILE
11
-142.44
-38.09
1
A
ALA
14
-162.93
-68.91
1
A
THR
17
-10.33
-60.11
1
A
LEU
19
-130.25
-42.22
1
A
LEU
22
114.26
-43.42
1
A
THR
24
-77.06
39.88
1
A
PHE
27
-109.05
61.97
1
A
MET
32
-13.64
-81.46
1
A
ALA
39
26.38
-102.33
1
A
LYS
40
-168.01
-44.99
1
A
LYS
41
-10.26
13.57
1
A
LEU
48
-132.63
-56.58
1
A
PRO
50
-50.39
-9.93
1
A
ILE
52
-67.29
57.47
1
A
ALA
53
-178.88
-30.10
1
A
LEU
58
-146.49
-71.78
1
A
LEU
62
-119.53
58.67
1
A
TYR
64
-141.15
-4.11
1
A
LEU
66
91.72
-97.81
1
A
MET
68
-146.43
-64.50
1
A
ASN
76
128.02
-51.73
1
A
PRO
77
-63.26
86.89
1
A
ILE
78
-126.47
-51.17
1
A
TRP
80
-60.36
98.18
1
A
ALA
84
-169.79
52.80
1
A
ASP
85
-157.49
-41.61
1
A
TRP
86
-117.00
54.05
1
A
PHE
88
71.54
81.15
1
A
THR
89
-98.89
-81.85
1
A
THR
90
74.97
-68.93
1
A
LEU
95
-169.64
-54.80
1
A
ASP
96
33.46
157.77
1
A
ALA
98
-119.43
58.12
1
A
LEU
100
-163.63
50.64
1
A
VAL
101
-7.69
72.60
1
A
GLN
105
48.21
4.85
1
A
THR
107
135.48
-113.26
1
A
ILE
108
58.92
-131.52
1
A
ASP
115
-81.09
-106.53
1
A
ILE
117
-69.72
-93.53
1
A
MET
118
-99.89
30.64
1
A
LYS
129
-86.63
43.83
1
A
VAL
130
-142.71
-62.53
1
A
TYR
131
-103.65
-79.77
1
A
SER
132
49.59
-158.60
1
A
TYR
133
-86.69
39.08
1
A
PHE
135
125.67
-176.58
1
A
VAL
136
-67.36
58.11
1
A
THR
142
-90.13
37.34
1
A
MET
145
-79.39
49.51
1
A
LEU
146
-164.48
-53.29
1
A
TYR
150
-78.57
33.55
1
A
PHE
156
-71.62
23.27
1
A
THR
157
-69.22
41.97
1
A
SER
158
-178.53
46.70
1
A
ALA
160
-78.86
42.35
1
A
GLU
161
-170.71
41.49
1
A
SER
162
-167.40
-161.86
1
A
PRO
165
-65.21
92.91
1
A
GLU
166
-55.83
12.71
1
A
VAL
167
-64.97
-85.20
1
A
THR
170
-150.50
-41.77
1
A
VAL
173
-59.66
-78.86
1
A
VAL
180
-164.01
-59.31
1
A
VAL
188
-75.99
45.83
1
A
ILE
191
-83.33
37.06
1
A
SER
193
58.60
89.09
1
A
GLU
194
-36.41
-33.26
1
A
ALA
196
-106.51
-78.35
1
A
ILE
198
-177.25
124.05
1
A
VAL
199
-72.47
-85.75
1
A
ASN
202
-149.84
-49.57
1
A
ILE
203
-50.65
-70.49
1
A
GLU
204
35.56
-84.88
1
A
THR
205
-151.19
-35.98
1
A
LEU
207
-69.94
-70.46
1
A
PHE
208
-21.10
-57.33
Solution structure of Bacteriorhodopsin
1
N
N
A
LEU
19
A
LEU
13
HELX_P
A
THR
24
A
THR
18
1
1
6
A
LEU
58
A
LEU
52
HELX_P
A
LEU
62
A
LEU
56
5
2
5
A
MET
68
A
MET
62
HELX_P
A
GLY
73
A
GLY
67
1
3
6
A
THR
107
A
THR
101
HELX_P
A
VAL
112
A
VAL
106
1
4
6
A
ILE
119
A
ILE
113
HELX_P
A
LEU
123
A
LEU
117
5
5
5
A
TRP
137
A
TRP
131
HELX_P
A
THR
142
A
THR
136
1
6
6
A
ILE
148
A
ILE
142
HELX_P
A
PHE
153
A
PHE
147
1
7
6
A
GLU
166
A
GLU
160
HELX_P
A
TRP
182
A
TRP
176
1
8
17
A
PHE
208
A
PHE
202
HELX_P
A
VAL
217
A
VAL
211
1
9
10
PROTON TRANSPORT
Bacteriorhodopsin, alternative method for structure determination, PROTON TRANSPORT
A
PRO
8
A
PRO
2
1
A
GLU
9
A
GLU
3
6.85
A
LEU
25
A
LEU
19
1
A
TYR
26
A
TYR
20
-13.49
A
VAL
34
A
VAL
28
1
A
SER
35
A
SER
29
4.20
A
ALA
39
A
ALA
33
1
A
LYS
40
A
LYS
34
-24.37
A
PHE
42
A
PHE
36
1
A
TYR
43
A
TYR
37
28.88
A
ALA
44
A
ALA
38
1
A
ILE
45
A
ILE
39
-18.44
A
LEU
87
A
LEU
81
1
A
PHE
88
A
PHE
82
-14.04
A
PHE
88
A
PHE
82
1
A
THR
89
A
THR
83
21.26
A
LEU
95
A
LEU
89
1
A
ASP
96
A
ASP
90
-23.22
A
LEU
127
A
LEU
121
1
A
THR
128
A
THR
122
16.77
A
TYR
131
A
TYR
125
1
A
SER
132
A
SER
126
-3.54
A
ARG
134
A
ARG
128
1
A
PHE
135
A
PHE
129
-8.59
A
GLU
194
A
GLU
188
1
A
GLY
195
A
GLY
189
-9.46
A
GLY
197
A
GLY
191
1
A
ILE
198
A
ILE
192
0.59
A
PRO
200
A
PRO
194
1
A
LEU
201
A
LEU
195
1.08
BACR_HALN1
UNP
1
20
P02945
RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADW
LFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPE
VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVG
20
231
1L0M
7
218
P02945
A
1
1
212