1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Katragadda, M. Alderfer, J.L. Yeagle, P.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 S C N 128 N C N 129 N C N 130 N C N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N C N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N N N 168 S C N 169 N C N 170 N O N 171 N C N 172 N C N 173 N C N 174 N C N 175 N N N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N S N 199 N C N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 S C N 214 N C N 215 N O N 216 N C Y 217 N C Y 218 N C Y 219 N C Y 220 N C Y 221 N C Y 222 N C N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N N N 236 S C N 237 N C N 238 N O N 239 N C N 240 N C N 241 N C N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N O N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 R C N 271 N O N 272 N C N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N N Y 292 N C Y 293 N C Y 294 N C Y 295 N C Y 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N C N 340 N C N 341 N O N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing Y 212 N doub Y 213 N sing Y 214 N sing N 215 N sing Y 216 N doub N 217 N sing Y 218 N doub N 219 N sing Y 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing Y 281 N doub Y 282 N sing Y 283 N sing N 284 N sing Y 285 N doub Y 286 N sing Y 287 N sing N 288 N sing Y 289 N sing Y 290 N doub N 291 N sing Y 292 N doub N 293 N sing Y 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing Y 309 N doub Y 310 N sing Y 311 N sing N 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing US Biophys.J. BIOJAU 0030 0006-3495 81 1029 1036 11463644 Assembly of a polytopic membrane protein structure from the solution structures of overlapping peptide fragments of bacteriorhodopsin. 2001 10.2210/pdb1l0m/pdb pdb_00001l0m 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 23256.477 Bacteriorhodopsin part of helix G absent 1 syn polymer no no RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADW LFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPE VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVG RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADW LFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPE VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Data collection 1 0 2002-03-27 1 1 2008-04-28 1 2 2011-07-13 1 3 2022-02-23 1 4 2024-05-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name RCSB Y RCSB 2002-02-11 REL REL The peptide, corresponding to different secondary structure elements, was chemically synthesized. The sequence of this peptide is naturally found in Halobacterium halobium. sample 1 2D NOESY DQF-COSY TOCSY 6 1 atm 293 K simulated annealing refined using molecular dynamics chmeically synthesized peptides DMSO data analysis Felix 97.1 processing DIANA structure solution SYBYL 6.6 refinement SYBYL 6.6 600 Bruker AMX ARG 7 n 1 ARG 7 A PRO 8 n 2 PRO 8 A GLU 9 n 3 GLU 9 A TRP 10 n 4 TRP 10 A ILE 11 n 5 ILE 11 A TRP 12 n 6 TRP 12 A LEU 13 n 7 LEU 13 A ALA 14 n 8 ALA 14 A LEU 15 n 9 LEU 15 A GLY 16 n 10 GLY 16 A THR 17 n 11 THR 17 A ALA 18 n 12 ALA 18 A LEU 19 n 13 LEU 19 A MET 20 n 14 MET 20 A GLY 21 n 15 GLY 21 A LEU 22 n 16 LEU 22 A GLY 23 n 17 GLY 23 A THR 24 n 18 THR 24 A LEU 25 n 19 LEU 25 A TYR 26 n 20 TYR 26 A PHE 27 n 21 PHE 27 A LEU 28 n 22 LEU 28 A VAL 29 n 23 VAL 29 A LYS 30 n 24 LYS 30 A GLY 31 n 25 GLY 31 A MET 32 n 26 MET 32 A GLY 33 n 27 GLY 33 A VAL 34 n 28 VAL 34 A SER 35 n 29 SER 35 A ASP 36 n 30 ASP 36 A PRO 37 n 31 PRO 37 A ASP 38 n 32 ASP 38 A ALA 39 n 33 ALA 39 A LYS 40 n 34 LYS 40 A LYS 41 n 35 LYS 41 A PHE 42 n 36 PHE 42 A TYR 43 n 37 TYR 43 A ALA 44 n 38 ALA 44 A ILE 45 n 39 ILE 45 A THR 46 n 40 THR 46 A THR 47 n 41 THR 47 A LEU 48 n 42 LEU 48 A VAL 49 n 43 VAL 49 A PRO 50 n 44 PRO 50 A ALA 51 n 45 ALA 51 A ILE 52 n 46 ILE 52 A ALA 53 n 47 ALA 53 A PHE 54 n 48 PHE 54 A THR 55 n 49 THR 55 A MET 56 n 50 MET 56 A TYR 57 n 51 TYR 57 A LEU 58 n 52 LEU 58 A SER 59 n 53 SER 59 A MET 60 n 54 MET 60 A LEU 61 n 55 LEU 61 A LEU 62 n 56 LEU 62 A GLY 63 n 57 GLY 63 A TYR 64 n 58 TYR 64 A GLY 65 n 59 GLY 65 A LEU 66 n 60 LEU 66 A THR 67 n 61 THR 67 A MET 68 n 62 MET 68 A VAL 69 n 63 VAL 69 A PRO 70 n 64 PRO 70 A PHE 71 n 65 PHE 71 A GLY 72 n 66 GLY 72 A GLY 73 n 67 GLY 73 A GLU 74 n 68 GLU 74 A GLN 75 n 69 GLN 75 A ASN 76 n 70 ASN 76 A PRO 77 n 71 PRO 77 A ILE 78 n 72 ILE 78 A TYR 79 n 73 TYR 79 A TRP 80 n 74 TRP 80 A ALA 81 n 75 ALA 81 A ARG 82 n 76 ARG 82 A TYR 83 n 77 TYR 83 A ALA 84 n 78 ALA 84 A ASP 85 n 79 ASP 85 A TRP 86 n 80 TRP 86 A LEU 87 n 81 LEU 87 A PHE 88 n 82 PHE 88 A THR 89 n 83 THR 89 A THR 90 n 84 THR 90 A PRO 91 n 85 PRO 91 A LEU 92 n 86 LEU 92 A LEU 93 n 87 LEU 93 A LEU 94 n 88 LEU 94 A LEU 95 n 89 LEU 95 A ASP 96 n 90 ASP 96 A LEU 97 n 91 LEU 97 A ALA 98 n 92 ALA 98 A LEU 99 n 93 LEU 99 A LEU 100 n 94 LEU 100 A VAL 101 n 95 VAL 101 A ASP 102 n 96 ASP 102 A ALA 103 n 97 ALA 103 A ASP 104 n 98 ASP 104 A GLN 105 n 99 GLN 105 A GLY 106 n 100 GLY 106 A THR 107 n 101 THR 107 A ILE 108 n 102 ILE 108 A LEU 109 n 103 LEU 109 A ALA 110 n 104 ALA 110 A LEU 111 n 105 LEU 111 A VAL 112 n 106 VAL 112 A GLY 113 n 107 GLY 113 A ALA 114 n 108 ALA 114 A ASP 115 n 109 ASP 115 A GLY 116 n 110 GLY 116 A ILE 117 n 111 ILE 117 A MET 118 n 112 MET 118 A ILE 119 n 113 ILE 119 A GLY 120 n 114 GLY 120 A THR 121 n 115 THR 121 A GLY 122 n 116 GLY 122 A LEU 123 n 117 LEU 123 A VAL 124 n 118 VAL 124 A GLY 125 n 119 GLY 125 A ALA 126 n 120 ALA 126 A LEU 127 n 121 LEU 127 A THR 128 n 122 THR 128 A LYS 129 n 123 LYS 129 A VAL 130 n 124 VAL 130 A TYR 131 n 125 TYR 131 A SER 132 n 126 SER 132 A TYR 133 n 127 TYR 133 A ARG 134 n 128 ARG 134 A PHE 135 n 129 PHE 135 A VAL 136 n 130 VAL 136 A TRP 137 n 131 TRP 137 A TRP 138 n 132 TRP 138 A ALA 139 n 133 ALA 139 A ILE 140 n 134 ILE 140 A SER 141 n 135 SER 141 A THR 142 n 136 THR 142 A ALA 143 n 137 ALA 143 A ALA 144 n 138 ALA 144 A MET 145 n 139 MET 145 A LEU 146 n 140 LEU 146 A TYR 147 n 141 TYR 147 A ILE 148 n 142 ILE 148 A LEU 149 n 143 LEU 149 A TYR 150 n 144 TYR 150 A VAL 151 n 145 VAL 151 A LEU 152 n 146 LEU 152 A PHE 153 n 147 PHE 153 A PHE 154 n 148 PHE 154 A GLY 155 n 149 GLY 155 A PHE 156 n 150 PHE 156 A THR 157 n 151 THR 157 A SER 158 n 152 SER 158 A LYS 159 n 153 LYS 159 A ALA 160 n 154 ALA 160 A GLU 161 n 155 GLU 161 A SER 162 n 156 SER 162 A MET 163 n 157 MET 163 A ARG 164 n 158 ARG 164 A PRO 165 n 159 PRO 165 A GLU 166 n 160 GLU 166 A VAL 167 n 161 VAL 167 A ALA 168 n 162 ALA 168 A SER 169 n 163 SER 169 A THR 170 n 164 THR 170 A PHE 171 n 165 PHE 171 A LYS 172 n 166 LYS 172 A VAL 173 n 167 VAL 173 A LEU 174 n 168 LEU 174 A ARG 175 n 169 ARG 175 A ASN 176 n 170 ASN 176 A VAL 177 n 171 VAL 177 A THR 178 n 172 THR 178 A VAL 179 n 173 VAL 179 A VAL 180 n 174 VAL 180 A LEU 181 n 175 LEU 181 A TRP 182 n 176 TRP 182 A SER 183 n 177 SER 183 A ALA 184 n 178 ALA 184 A TYR 185 n 179 TYR 185 A PRO 186 n 180 PRO 186 A VAL 187 n 181 VAL 187 A VAL 188 n 182 VAL 188 A TRP 189 n 183 TRP 189 A LEU 190 n 184 LEU 190 A ILE 191 n 185 ILE 191 A GLY 192 n 186 GLY 192 A SER 193 n 187 SER 193 A GLU 194 n 188 GLU 194 A GLY 195 n 189 GLY 195 A ALA 196 n 190 ALA 196 A GLY 197 n 191 GLY 197 A ILE 198 n 192 ILE 198 A VAL 199 n 193 VAL 199 A PRO 200 n 194 PRO 200 A LEU 201 n 195 LEU 201 A ASN 202 n 196 ASN 202 A ILE 203 n 197 ILE 203 A GLU 204 n 198 GLU 204 A THR 205 n 199 THR 205 A LEU 206 n 200 LEU 206 A LEU 207 n 201 LEU 207 A PHE 208 n 202 PHE 208 A MET 209 n 203 MET 209 A VAL 210 n 204 VAL 210 A LEU 211 n 205 LEU 211 A ASP 212 n 206 ASP 212 A VAL 213 n 207 VAL 213 A SER 214 n 208 SER 214 A ALA 215 n 209 ALA 215 A LYS 216 n 210 LYS 216 A VAL 217 n 211 VAL 217 A GLY 218 n 212 GLY 218 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A NE1 CD2 TRP TYR 182 185 2.19 1 A A LEU GLY 15 16 -148.88 1 A A MET GLY 20 21 136.68 1 A A LEU GLY 22 23 139.66 1 A A THR LEU 24 25 147.74 1 A A PHE LEU 27 28 30.70 1 A A LEU VAL 28 29 131.84 1 A A VAL LYS 29 30 138.37 1 A A LYS GLY 30 31 135.05 1 A A PRO ASP 37 38 133.46 1 A A LYS LYS 40 41 -123.43 1 A A TYR ALA 43 44 -97.11 1 A A ILE THR 45 46 -126.46 1 A A THR THR 46 47 59.54 1 A A MET TYR 56 57 -138.53 1 A A MET LEU 60 61 148.60 1 A A LEU GLY 62 63 -38.78 1 A A PRO ILE 77 78 142.80 1 A A TYR TRP 79 80 129.74 1 A A ALA ARG 81 82 -50.17 1 A A THR THR 89 90 79.54 1 A A PRO LEU 91 92 149.16 1 A A ASP LEU 96 97 97.72 1 A A ALA LEU 98 99 132.74 1 A A LEU VAL 100 101 50.23 1 A A ASP GLN 104 105 147.52 1 A A GLY THR 106 107 -139.30 1 A A THR ILE 107 108 143.31 1 A A VAL GLY 124 125 -143.28 1 A A VAL TYR 130 131 -91.92 1 A A SER TYR 132 133 -63.61 1 A A VAL TRP 136 137 141.01 1 A A THR ALA 142 143 141.07 1 A A TYR VAL 150 151 147.51 1 A A PHE PHE 153 154 148.81 1 A A PHE GLY 154 155 146.65 1 A A GLY PHE 155 156 -48.35 1 A A PHE THR 156 157 141.95 1 A A ARG PRO 164 165 144.89 1 A A GLU VAL 166 167 -121.71 1 A A TRP SER 182 183 133.08 1 A A TRP LEU 189 190 135.87 1 A A ILE VAL 198 199 -135.71 1 A A ILE GLU 203 204 136.19 1 A TYR 26 0.196 SIDE CHAIN 1 A PHE 27 0.174 SIDE CHAIN 1 A PHE 42 0.159 SIDE CHAIN 1 A TYR 43 0.092 SIDE CHAIN 1 A TYR 64 0.082 SIDE CHAIN 1 A TYR 79 0.101 SIDE CHAIN 1 A ARG 82 0.131 SIDE CHAIN 1 A PHE 88 0.122 SIDE CHAIN 1 A TYR 131 0.157 SIDE CHAIN 1 A TYR 133 0.098 SIDE CHAIN 1 A TYR 150 0.071 SIDE CHAIN 1 A PHE 156 0.144 SIDE CHAIN 1 A ARG 164 0.089 SIDE CHAIN 1 A TYR 185 0.262 SIDE CHAIN 1 A PHE 208 0.147 SIDE CHAIN 1 12.30 1.70 111.00 123.30 A A A CB CG CD1 LEU LEU LEU 28 28 28 N 1 12.26 1.50 110.10 122.36 A A A CB CA C ALA ALA ALA 39 39 39 N 1 12.57 2.00 110.90 123.47 A A A CA CB CG2 ILE ILE ILE 52 52 52 N 1 -3.16 0.50 120.30 117.14 A A A NE CZ NH2 ARG ARG ARG 82 82 82 N 1 16.15 2.50 121.70 137.85 A A A C N CA LEU PHE PHE 87 88 88 Y 1 -13.05 2.10 128.40 115.35 A A A C N CD THR PRO PRO 90 91 91 Y 1 18.61 2.50 121.70 140.31 A A A C N CA LEU ASP ASP 95 96 96 Y 1 11.23 1.50 110.90 122.13 A A A CA CB CG1 VAL VAL VAL 124 124 124 N 1 -4.39 0.60 121.00 116.61 A A A CB CG CD2 TYR TYR TYR 131 131 131 N 1 14.62 1.90 110.10 124.72 A A A CB CA C SER SER SER 132 132 132 N 1 14.27 2.00 110.40 124.67 A A A CB CA C TYR TYR TYR 133 133 133 N 1 14.77 1.90 113.40 128.17 A A A CA CB CG TYR TYR TYR 133 133 133 N 1 20.39 2.50 121.70 142.09 A A A C N CA ARG PHE PHE 134 135 135 Y 1 -7.19 0.70 120.80 113.61 A A A CB CG CD2 PHE PHE PHE 156 156 156 N 1 7.40 1.10 130.40 137.80 A A A NE1 CE2 CZ2 TRP TRP TRP 182 182 182 N 1 -7.56 1.20 122.30 114.74 A A A CD2 CE2 CZ2 TRP TRP TRP 182 182 182 N 1 16.79 1.90 113.40 130.19 A A A CA CB CG TYR TYR TYR 185 185 185 N 1 5.09 0.60 121.00 126.09 A A A CB CG CD2 TYR TYR TYR 185 185 185 N 1 -8.22 0.60 121.00 112.78 A A A CB CG CD1 TYR TYR TYR 185 185 185 N 1 -19.68 0.80 121.30 101.62 A A A CG CD2 CE2 TYR TYR TYR 185 185 185 N 1 -6.57 0.70 120.80 114.23 A A A CB CG CD2 PHE PHE PHE 208 208 208 N 1 A A CG CD2 TRP TRP 182 182 0.523 0.017 1.432 1.955 N 1 A A CG CD1 TRP TRP 182 182 0.366 0.014 1.363 1.729 N 1 A A CD1 NE1 TRP TRP 182 182 0.526 0.017 1.375 1.901 N 1 A A NE1 CE2 TRP TRP 182 182 0.569 0.013 1.371 1.940 N 1 A A CE2 CD2 TRP TRP 182 182 0.448 0.012 1.409 1.857 N 1 A A CG CD2 TYR TYR 185 185 0.080 0.013 1.387 1.467 N 1 A PRO 8 -39.91 130.58 1 A ILE 11 -142.44 -38.09 1 A ALA 14 -162.93 -68.91 1 A THR 17 -10.33 -60.11 1 A LEU 19 -130.25 -42.22 1 A LEU 22 114.26 -43.42 1 A THR 24 -77.06 39.88 1 A PHE 27 -109.05 61.97 1 A MET 32 -13.64 -81.46 1 A ALA 39 26.38 -102.33 1 A LYS 40 -168.01 -44.99 1 A LYS 41 -10.26 13.57 1 A LEU 48 -132.63 -56.58 1 A PRO 50 -50.39 -9.93 1 A ILE 52 -67.29 57.47 1 A ALA 53 -178.88 -30.10 1 A LEU 58 -146.49 -71.78 1 A LEU 62 -119.53 58.67 1 A TYR 64 -141.15 -4.11 1 A LEU 66 91.72 -97.81 1 A MET 68 -146.43 -64.50 1 A ASN 76 128.02 -51.73 1 A PRO 77 -63.26 86.89 1 A ILE 78 -126.47 -51.17 1 A TRP 80 -60.36 98.18 1 A ALA 84 -169.79 52.80 1 A ASP 85 -157.49 -41.61 1 A TRP 86 -117.00 54.05 1 A PHE 88 71.54 81.15 1 A THR 89 -98.89 -81.85 1 A THR 90 74.97 -68.93 1 A LEU 95 -169.64 -54.80 1 A ASP 96 33.46 157.77 1 A ALA 98 -119.43 58.12 1 A LEU 100 -163.63 50.64 1 A VAL 101 -7.69 72.60 1 A GLN 105 48.21 4.85 1 A THR 107 135.48 -113.26 1 A ILE 108 58.92 -131.52 1 A ASP 115 -81.09 -106.53 1 A ILE 117 -69.72 -93.53 1 A MET 118 -99.89 30.64 1 A LYS 129 -86.63 43.83 1 A VAL 130 -142.71 -62.53 1 A TYR 131 -103.65 -79.77 1 A SER 132 49.59 -158.60 1 A TYR 133 -86.69 39.08 1 A PHE 135 125.67 -176.58 1 A VAL 136 -67.36 58.11 1 A THR 142 -90.13 37.34 1 A MET 145 -79.39 49.51 1 A LEU 146 -164.48 -53.29 1 A TYR 150 -78.57 33.55 1 A PHE 156 -71.62 23.27 1 A THR 157 -69.22 41.97 1 A SER 158 -178.53 46.70 1 A ALA 160 -78.86 42.35 1 A GLU 161 -170.71 41.49 1 A SER 162 -167.40 -161.86 1 A PRO 165 -65.21 92.91 1 A GLU 166 -55.83 12.71 1 A VAL 167 -64.97 -85.20 1 A THR 170 -150.50 -41.77 1 A VAL 173 -59.66 -78.86 1 A VAL 180 -164.01 -59.31 1 A VAL 188 -75.99 45.83 1 A ILE 191 -83.33 37.06 1 A SER 193 58.60 89.09 1 A GLU 194 -36.41 -33.26 1 A ALA 196 -106.51 -78.35 1 A ILE 198 -177.25 124.05 1 A VAL 199 -72.47 -85.75 1 A ASN 202 -149.84 -49.57 1 A ILE 203 -50.65 -70.49 1 A GLU 204 35.56 -84.88 1 A THR 205 -151.19 -35.98 1 A LEU 207 -69.94 -70.46 1 A PHE 208 -21.10 -57.33 Solution structure of Bacteriorhodopsin 1 N N A LEU 19 A LEU 13 HELX_P A THR 24 A THR 18 1 1 6 A LEU 58 A LEU 52 HELX_P A LEU 62 A LEU 56 5 2 5 A MET 68 A MET 62 HELX_P A GLY 73 A GLY 67 1 3 6 A THR 107 A THR 101 HELX_P A VAL 112 A VAL 106 1 4 6 A ILE 119 A ILE 113 HELX_P A LEU 123 A LEU 117 5 5 5 A TRP 137 A TRP 131 HELX_P A THR 142 A THR 136 1 6 6 A ILE 148 A ILE 142 HELX_P A PHE 153 A PHE 147 1 7 6 A GLU 166 A GLU 160 HELX_P A TRP 182 A TRP 176 1 8 17 A PHE 208 A PHE 202 HELX_P A VAL 217 A VAL 211 1 9 10 PROTON TRANSPORT Bacteriorhodopsin, alternative method for structure determination, PROTON TRANSPORT A PRO 8 A PRO 2 1 A GLU 9 A GLU 3 6.85 A LEU 25 A LEU 19 1 A TYR 26 A TYR 20 -13.49 A VAL 34 A VAL 28 1 A SER 35 A SER 29 4.20 A ALA 39 A ALA 33 1 A LYS 40 A LYS 34 -24.37 A PHE 42 A PHE 36 1 A TYR 43 A TYR 37 28.88 A ALA 44 A ALA 38 1 A ILE 45 A ILE 39 -18.44 A LEU 87 A LEU 81 1 A PHE 88 A PHE 82 -14.04 A PHE 88 A PHE 82 1 A THR 89 A THR 83 21.26 A LEU 95 A LEU 89 1 A ASP 96 A ASP 90 -23.22 A LEU 127 A LEU 121 1 A THR 128 A THR 122 16.77 A TYR 131 A TYR 125 1 A SER 132 A SER 126 -3.54 A ARG 134 A ARG 128 1 A PHE 135 A PHE 129 -8.59 A GLU 194 A GLU 188 1 A GLY 195 A GLY 189 -9.46 A GLY 197 A GLY 191 1 A ILE 198 A ILE 192 0.59 A PRO 200 A PRO 194 1 A LEU 201 A LEU 195 1.08 BACR_HALN1 UNP 1 20 P02945 RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYWARYADW LFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPE VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVG 20 231 1L0M 7 218 P02945 A 1 1 212