1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kozlov, G.
Trempe, J.-F.
Perreault, A.
Wong, M.
Denisov, A.
Ghandi, S.
Gehring, K.
Ekiel, I.
Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Solution Structure of the Closed Form of a Peptidyl-Prolyl Isomerase Reveals the Mechanism of Protein Folding
10.2210/pdb1l1p/pdb
pdb_00001l1p
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
11662.936
trigger factor
5.2.1.8
PPIase domain
1
man
polymer
TF
no
no
GSHMQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHA
ENLKGKAAKFAINLKKVEERELPELT
GSHMQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHA
ENLKGKAAKFAINLKKVEERELPELT
A
TIG_ECOLI
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
562
Escherichia coli
511693
Escherichia coli BL21
BL21
plasmid
Montreal-Kingston Bacterial Structural Genomics Initiative
BSGI
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-06-24
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2002-02-19
REL
REL
The structure was determined using standard homonuclear and heteronuclear NMR experiments.
structures with the lowest energy
60
30
3D_15N-separated_NOESY
HNHA
2D_NOESY
2D_NOESY
0.1M NaCl
6.8
ambient
303
K
The structures are based on 1710 Noe-derived restraints, 25 hydrogen bonds, 96 dihedral angle restraints and 50 N-HN residual dipolar couplings.
simulated annealing
1
lowest energy
2-3mM PPIase domain U-15N; 50mM phosphate buffer; 0.1M NaCl; 0.02% NaN3
90% H2O/10% D2O
2-3mM PPIase domain; 50mM phosphate buffer; 0.1M NaCl; 0.02% NaN3
90% H2O/10% D2O
2-3mM PPIase domain; 50mM phosphate buffer; 0.1M NaCl; 0.02% NaN3
100% D2O
Bruker
collection
XwinNMR
2.1
Delsuc
processing
Gifa
4.31
Wuthrich
data analysis
XEASY
1.3.13
Nilges
structure solution
ARIA
0.9
Brunger
refinement
CNS
0.9
500
Bruker
DRX
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
HIS
3
n
3
HIS
3
A
MET
4
n
4
MET
4
A
GLN
5
n
5
GLN
5
A
ALA
6
n
6
ALA
6
A
THR
7
n
7
THR
7
A
TRP
8
n
8
TRP
8
A
LYS
9
n
9
LYS
9
A
GLU
10
n
10
GLU
10
A
LYS
11
n
11
LYS
11
A
ASP
12
n
12
ASP
12
A
GLY
13
n
13
GLY
13
A
ALA
14
n
14
ALA
14
A
VAL
15
n
15
VAL
15
A
GLU
16
n
16
GLU
16
A
ALA
17
n
17
ALA
17
A
GLU
18
n
18
GLU
18
A
ASP
19
n
19
ASP
19
A
ARG
20
n
20
ARG
20
A
VAL
21
n
21
VAL
21
A
THR
22
n
22
THR
22
A
ILE
23
n
23
ILE
23
A
ASP
24
n
24
ASP
24
A
PHE
25
n
25
PHE
25
A
THR
26
n
26
THR
26
A
GLY
27
n
27
GLY
27
A
SER
28
n
28
SER
28
A
VAL
29
n
29
VAL
29
A
ASP
30
n
30
ASP
30
A
GLY
31
n
31
GLY
31
A
GLU
32
n
32
GLU
32
A
GLU
33
n
33
GLU
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
GLY
36
n
36
GLY
36
A
GLY
37
n
37
GLY
37
A
LYS
38
n
38
LYS
38
A
ALA
39
n
39
ALA
39
A
SER
40
n
40
SER
40
A
ASP
41
n
41
ASP
41
A
PHE
42
n
42
PHE
42
A
VAL
43
n
43
VAL
43
A
LEU
44
n
44
LEU
44
A
ALA
45
n
45
ALA
45
A
MET
46
n
46
MET
46
A
GLY
47
n
47
GLY
47
A
GLN
48
n
48
GLN
48
A
GLY
49
n
49
GLY
49
A
ARG
50
n
50
ARG
50
A
MET
51
n
51
MET
51
A
ILE
52
n
52
ILE
52
A
PRO
53
n
53
PRO
53
A
GLY
54
n
54
GLY
54
A
PHE
55
n
55
PHE
55
A
GLU
56
n
56
GLU
56
A
ASP
57
n
57
ASP
57
A
GLY
58
n
58
GLY
58
A
ILE
59
n
59
ILE
59
A
LYS
60
n
60
LYS
60
A
GLY
61
n
61
GLY
61
A
HIS
62
n
62
HIS
62
A
LYS
63
n
63
LYS
63
A
ALA
64
n
64
ALA
64
A
GLY
65
n
65
GLY
65
A
GLU
66
n
66
GLU
66
A
GLU
67
n
67
GLU
67
A
PHE
68
n
68
PHE
68
A
THR
69
n
69
THR
69
A
ILE
70
n
70
ILE
70
A
ASP
71
n
71
ASP
71
A
VAL
72
n
72
VAL
72
A
THR
73
n
73
THR
73
A
PHE
74
n
74
PHE
74
A
PRO
75
n
75
PRO
75
A
GLU
76
n
76
GLU
76
A
GLU
77
n
77
GLU
77
A
TYR
78
n
78
TYR
78
A
HIS
79
n
79
HIS
79
A
ALA
80
n
80
ALA
80
A
GLU
81
n
81
GLU
81
A
ASN
82
n
82
ASN
82
A
LEU
83
n
83
LEU
83
A
LYS
84
n
84
LYS
84
A
GLY
85
n
85
GLY
85
A
LYS
86
n
86
LYS
86
A
ALA
87
n
87
ALA
87
A
ALA
88
n
88
ALA
88
A
LYS
89
n
89
LYS
89
A
PHE
90
n
90
PHE
90
A
ALA
91
n
91
ALA
91
A
ILE
92
n
92
ILE
92
A
ASN
93
n
93
ASN
93
A
LEU
94
n
94
LEU
94
A
LYS
95
n
95
LYS
95
A
LYS
96
n
96
LYS
96
A
VAL
97
n
97
VAL
97
A
GLU
98
n
98
GLU
98
A
GLU
99
n
99
GLU
99
A
ARG
100
n
100
ARG
100
A
GLU
101
n
101
GLU
101
A
LEU
102
n
102
LEU
102
A
PRO
103
n
103
PRO
103
A
GLU
104
n
104
GLU
104
A
LEU
105
n
105
LEU
105
A
THR
106
n
106
THR
106
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ALA
39
A
O
ALA
39
A
N
PHE
25
A
N
PHE
25
A
N
ASP
24
A
N
ASP
24
A
O
ASN
93
A
O
ASN
93
A
O
ILE
92
A
O
ILE
92
A
N
PHE
68
A
N
PHE
68
1
A
A
O
H
PHE
ALA
25
39
1.51
2
A
A
O
H
PHE
ALA
25
39
1.57
3
A
A
O
H
PHE
ALA
25
39
1.58
4
A
A
O
H
PHE
ALA
25
39
1.58
5
A
A
O
H
PHE
ALA
25
39
1.55
5
A
A
O
H
SER
LYS
28
89
1.58
6
A
A
O
H
PHE
ALA
25
39
1.56
6
A
A
O
H
SER
LYS
28
89
1.59
7
A
A
O
H
PHE
ALA
25
39
1.54
8
A
A
O
H
PHE
ALA
25
39
1.53
9
A
A
O
H
PHE
ALA
25
39
1.54
10
A
A
O
H
PHE
ALA
25
39
1.54
11
A
A
O
H
PHE
ALA
25
39
1.55
12
A
A
O
H
PHE
ALA
25
39
1.54
13
A
A
O
H
PHE
ALA
25
39
1.55
14
A
A
O
H
PHE
ALA
25
39
1.53
15
A
A
O
H
PHE
ALA
25
39
1.53
16
A
A
O
H
PHE
ALA
25
39
1.53
17
A
A
O
H
PHE
ALA
25
39
1.59
18
A
A
O
H
PHE
ALA
25
39
1.54
19
A
A
O
H
PHE
ALA
25
39
1.50
19
A
A
H
O
GLY
GLY
27
37
1.56
20
A
A
O
H
PHE
ALA
25
39
1.54
21
A
A
O
H
PHE
ALA
25
39
1.60
22
A
A
O
H
PHE
ALA
25
39
1.55
24
A
A
O
H
PHE
ALA
25
39
1.53
26
A
A
O
H
PHE
ALA
25
39
1.54
27
A
A
O
H
PHE
ALA
25
39
1.52
28
A
A
O
H
PHE
ALA
25
39
1.58
29
A
A
O
H
PHE
ALA
25
39
1.56
30
A
A
O
H
PHE
ALA
25
39
1.55
1
A
HIS
3
-153.57
-59.96
1
A
MET
4
59.72
92.92
1
A
LYS
9
-147.48
35.15
1
A
LYS
11
-69.10
-152.99
1
A
ALA
17
-20.65
-73.22
1
A
GLU
18
-118.30
71.71
1
A
VAL
29
-112.87
-82.45
1
A
ASP
30
-96.11
39.71
1
A
PHE
34
-84.01
-133.83
1
A
ASP
41
-102.94
70.78
1
A
MET
46
-64.79
92.74
1
A
GLN
48
-131.01
-56.94
1
A
MET
51
-51.49
94.12
1
A
ASP
57
-80.24
-76.83
1
A
ILE
59
-78.45
40.79
1
A
ALA
64
-60.45
97.45
1
A
PRO
75
-66.95
-176.09
1
A
LYS
84
-34.63
136.50
1
A
LYS
95
-149.79
-107.30
1
A
GLU
101
-150.12
82.08
2
A
HIS
3
60.79
160.82
2
A
LYS
9
-147.29
38.50
2
A
LYS
11
-69.27
-156.70
2
A
ALA
14
-69.53
-172.65
2
A
ALA
17
-20.74
-73.26
2
A
GLU
18
-118.08
72.85
2
A
VAL
29
-100.85
-80.70
2
A
ASP
30
-95.38
36.99
2
A
PHE
34
-82.71
-136.38
2
A
ASP
41
-102.80
70.44
2
A
MET
46
-65.51
84.61
2
A
GLN
48
-122.16
-62.84
2
A
ARG
50
176.85
67.35
2
A
MET
51
-48.31
109.32
2
A
ASP
57
-80.65
-74.20
2
A
ILE
59
-75.02
39.72
2
A
ALA
64
-59.88
97.72
2
A
HIS
79
36.66
75.53
2
A
LYS
84
-32.36
127.59
2
A
LYS
95
-147.69
-109.38
2
A
GLU
101
-165.67
100.24
3
A
LYS
9
-140.13
16.03
3
A
LYS
11
-63.45
-150.19
3
A
ALA
14
-69.20
-174.18
3
A
ALA
17
-20.87
-74.44
3
A
GLU
18
-117.99
71.67
3
A
VAL
29
-111.78
-73.37
3
A
ASP
30
-95.63
33.50
3
A
PHE
34
-82.48
-136.01
3
A
ASP
41
-102.94
70.55
3
A
MET
46
-67.72
81.28
3
A
GLN
48
-132.44
-65.07
3
A
ARG
50
-179.14
67.59
3
A
ASP
57
-80.25
-75.31
3
A
ILE
59
-77.43
40.27
3
A
ALA
64
-59.86
98.33
3
A
PRO
75
-68.05
-178.42
3
A
HIS
79
35.51
71.34
3
A
LYS
84
-31.81
127.33
3
A
LYS
95
-150.98
-110.56
3
A
GLU
101
-151.87
68.65
4
A
LYS
9
-146.64
37.20
4
A
LYS
11
-69.46
-149.98
4
A
ALA
14
-68.78
-171.17
4
A
ALA
17
-20.81
-74.56
4
A
GLU
18
-118.37
70.21
4
A
VAL
29
-117.57
-75.00
4
A
ASP
30
-95.81
38.32
4
A
PHE
34
-83.07
-135.96
4
A
ASP
41
-102.88
71.00
4
A
GLN
48
-122.27
-66.45
4
A
ARG
50
179.57
66.32
4
A
ASP
57
-79.70
-76.15
4
A
ILE
59
-81.62
37.92
4
A
ALA
64
-60.54
97.04
4
A
HIS
79
32.81
73.98
4
A
LYS
84
-34.93
130.89
4
A
LYS
95
-150.46
-106.35
4
A
GLU
101
177.96
72.30
5
A
LYS
9
-147.17
31.37
5
A
LYS
11
-65.78
-158.76
5
A
ALA
14
-69.40
-173.03
5
A
ALA
17
-21.20
-73.89
5
A
GLU
18
-117.69
68.24
5
A
VAL
29
-114.57
-80.38
5
A
ASP
30
-95.28
40.76
5
A
PHE
34
-83.40
-135.64
5
A
ASP
41
-103.14
71.41
5
A
MET
46
-68.89
84.76
5
A
GLN
48
-127.32
-64.65
5
A
ARG
50
179.15
69.39
5
A
ASP
57
-78.74
-77.87
5
A
ILE
59
-76.47
36.19
5
A
ALA
64
-59.56
93.31
5
A
TYR
78
-67.23
-70.31
5
A
HIS
79
34.41
73.50
5
A
LYS
84
-31.93
125.35
5
A
LYS
95
-151.77
-104.98
5
A
GLU
101
-165.69
104.40
5
A
GLU
104
-97.39
-69.83
6
A
GLN
5
-95.96
-71.78
6
A
LYS
9
-143.65
16.44
6
A
LYS
11
-66.18
-150.13
6
A
ALA
14
-69.44
-171.93
6
A
ALA
17
-20.82
-74.38
6
A
GLU
18
-118.05
70.09
6
A
VAL
29
-109.44
-81.36
6
A
ASP
30
-95.47
40.81
6
A
PHE
34
-82.29
-137.20
6
A
ASP
41
-103.15
70.50
6
A
MET
46
-68.69
79.29
6
A
GLN
48
-130.37
-68.11
6
A
ARG
50
-179.80
65.48
6
A
ASP
57
-80.08
-77.03
6
A
ILE
59
-80.63
38.96
6
A
HIS
79
32.64
79.94
6
A
LYS
84
-34.15
127.95
6
A
LYS
95
-147.88
-110.26
6
A
GLU
101
-164.74
84.40
7
A
LYS
9
-147.23
26.77
7
A
LYS
11
-68.21
-156.79
7
A
ALA
14
-70.97
-169.57
7
A
ALA
17
-20.61
-74.25
7
A
GLU
18
-118.25
71.41
7
A
ASP
30
-95.77
35.77
7
A
PHE
34
-83.23
-135.26
7
A
ASP
41
-103.12
70.93
7
A
MET
46
-68.93
80.50
7
A
GLN
48
-127.14
-67.90
7
A
ARG
50
179.01
67.59
7
A
ASP
57
-80.18
-74.94
7
A
ILE
59
-81.31
38.60
7
A
ALA
64
-60.46
95.82
7
A
HIS
79
34.12
62.49
7
A
LYS
84
-30.00
125.23
7
A
LYS
95
-148.76
-108.17
7
A
GLU
98
-122.53
-167.90
7
A
GLU
101
-171.71
61.89
8
A
SER
2
-139.35
-48.19
8
A
MET
4
-120.27
-54.20
8
A
LYS
9
-147.12
28.47
8
A
LYS
11
-68.02
-144.13
8
A
ALA
14
-69.34
-173.76
8
A
ALA
17
-20.67
-74.24
8
A
GLU
18
-118.65
72.01
8
A
VAL
29
-109.83
-70.91
8
A
ASP
30
-95.69
37.25
8
A
PHE
34
-83.16
-135.11
8
A
ASP
41
-103.23
70.22
8
A
MET
46
-64.59
77.98
8
A
GLN
48
-109.87
-71.30
8
A
ARG
50
-178.27
70.08
8
A
MET
51
-47.45
109.71
8
A
ASP
57
-78.91
-74.88
8
A
ILE
59
-80.21
39.32
8
A
ALA
64
-60.50
95.35
8
A
PRO
75
-64.87
-179.96
8
A
TYR
78
-70.91
-70.77
8
A
HIS
79
33.60
73.72
8
A
LYS
84
-29.22
125.15
8
A
LYS
95
-147.68
-106.27
8
A
GLU
101
173.40
92.17
9
A
LYS
9
-146.87
20.50
9
A
LYS
11
-68.07
-153.89
9
A
ALA
17
-20.89
-73.76
9
A
GLU
18
-118.26
71.14
9
A
VAL
29
-102.77
-79.28
9
A
ASP
30
-95.21
38.04
9
A
PHE
34
-82.48
-136.64
9
A
ASP
41
-103.03
71.17
9
A
MET
46
-65.49
86.87
9
A
GLN
48
-134.67
-67.90
9
A
ARG
50
39.95
60.64
9
A
ASP
57
-78.28
-76.24
9
A
ILE
59
-79.84
38.74
9
A
ALA
64
-60.48
96.42
9
A
PRO
75
-63.07
-175.28
9
A
HIS
79
-110.77
79.05
9
A
LYS
84
-33.90
127.57
9
A
LYS
95
-150.32
-107.98
9
A
GLU
98
-123.20
-167.86
9
A
GLU
101
-156.01
61.68
9
A
GLU
104
-93.20
38.82
10
A
LYS
9
-147.42
30.66
10
A
LYS
11
-69.04
-160.59
10
A
ALA
14
-70.70
-169.43
10
A
ALA
17
-20.96
-73.17
10
A
GLU
18
-118.09
68.38
10
A
VAL
29
-110.92
-72.32
10
A
ASP
30
-95.59
33.96
10
A
PHE
34
-82.70
-135.00
10
A
ASP
41
-102.98
71.16
10
A
GLN
48
-130.82
-71.31
10
A
ARG
50
38.37
67.69
10
A
ASP
57
-80.19
-75.69
10
A
ILE
59
-77.51
39.58
10
A
ALA
64
-59.94
97.10
10
A
HIS
79
35.08
74.75
10
A
LYS
84
-30.54
124.23
10
A
LYS
95
-147.62
-114.37
10
A
GLU
101
-179.38
112.36
11
A
SER
2
60.50
96.76
11
A
LYS
9
-147.18
29.92
11
A
LYS
11
-67.72
-156.95
11
A
ALA
14
-69.71
-170.63
11
A
ALA
17
-20.68
-73.24
11
A
GLU
18
-118.11
70.28
11
A
VAL
29
-97.65
-84.05
11
A
ASP
30
-95.17
44.06
11
A
PHE
34
-82.42
-136.49
11
A
ASP
41
-103.02
71.21
11
A
MET
46
-68.88
78.43
11
A
GLN
48
-129.53
-66.65
11
A
ARG
50
178.56
68.80
11
A
ASP
57
-80.10
-75.78
11
A
ILE
59
-81.68
39.51
11
A
ALA
64
-60.26
95.60
11
A
PRO
75
-67.04
-179.14
11
A
TYR
78
-70.16
-70.10
11
A
HIS
79
35.56
71.11
11
A
LYS
84
-33.23
127.03
11
A
LYS
95
-147.72
-107.59
11
A
GLU
101
-170.04
61.56
12
A
LYS
11
-63.60
-151.05
12
A
ALA
17
-20.67
-74.70
12
A
GLU
18
-118.48
71.04
12
A
VAL
29
-108.05
-80.85
12
A
ASP
30
-95.29
41.91
12
A
PHE
34
-82.64
-136.49
12
A
ASP
41
-103.21
70.90
12
A
MET
46
-68.46
78.30
12
A
GLN
48
-126.18
-66.59
12
A
ARG
50
175.32
69.67
12
A
ASP
57
-69.67
-76.08
12
A
ILE
59
-76.86
35.71
12
A
ALA
64
-59.51
97.49
12
A
HIS
79
35.42
75.57
12
A
LYS
84
-33.13
123.84
12
A
LYS
95
-150.38
-110.92
12
A
GLU
101
-178.88
69.45
13
A
SER
2
-160.34
-44.01
13
A
HIS
3
64.12
111.71
13
A
LYS
9
-147.11
26.10
13
A
LYS
11
-63.27
-153.08
13
A
ALA
14
-68.95
-174.21
13
A
ALA
17
-20.91
-74.25
13
A
GLU
18
-118.27
71.87
13
A
VAL
29
-109.57
-75.18
13
A
ASP
30
-95.66
40.12
13
A
PHE
34
-83.23
-134.83
13
A
ASP
41
-102.94
70.30
13
A
MET
46
-67.90
81.59
13
A
GLN
48
-120.92
-69.97
13
A
ARG
50
179.06
70.31
13
A
ASP
57
-79.44
-75.76
13
A
ILE
59
-81.65
41.60
13
A
ALA
64
-60.26
96.01
13
A
TYR
78
-64.90
-70.52
13
A
HIS
79
35.88
73.20
13
A
LYS
84
-32.35
125.36
13
A
LYS
95
-146.65
-108.47
13
A
GLU
98
-123.93
-164.85
14
A
SER
2
-121.22
-53.12
14
A
MET
4
61.62
154.58
14
A
LYS
9
-147.15
33.81
14
A
LYS
11
-69.37
-156.16
14
A
ALA
17
-21.09
-74.95
14
A
GLU
18
-117.96
69.97
14
A
ASP
19
-100.29
-165.74
14
A
VAL
29
-109.21
-79.13
14
A
ASP
30
-95.17
40.15
14
A
PHE
34
-82.51
-137.50
14
A
ASP
41
-103.03
71.64
14
A
GLN
48
-123.59
-64.80
14
A
ARG
50
-179.30
66.18
14
A
ASP
57
-76.44
-77.08
14
A
ILE
59
-83.13
40.04
14
A
ALA
64
-60.09
96.26
14
A
HIS
79
35.38
75.64
14
A
LYS
84
-36.42
130.86
14
A
LYS
95
-148.73
-109.34
14
A
GLU
101
-168.11
81.56
15
A
LYS
9
-146.72
37.93
15
A
LYS
11
-68.32
-159.49
15
A
ALA
14
-70.45
-169.02
15
A
ALA
17
-21.19
-74.03
15
A
GLU
18
-118.03
68.64
15
A
ASP
19
-100.32
-169.91
15
A
VAL
29
-110.78
-72.92
15
A
ASP
30
-95.95
37.65
15
A
PHE
34
-83.02
-135.00
15
A
ASP
41
-103.14
71.39
15
A
GLN
48
-122.26
-68.38
15
A
ARG
50
179.58
63.13
15
A
ASP
57
-79.83
-78.49
15
A
ILE
59
-80.55
36.70
15
A
ALA
64
-60.01
96.36
15
A
HIS
79
32.58
77.35
15
A
LYS
84
-33.76
125.57
15
A
LYS
95
-150.07
-110.55
15
A
GLU
101
-172.80
106.30
16
A
HIS
3
61.44
92.07
16
A
LYS
11
-66.05
-141.13
16
A
ASP
12
-141.44
21.92
16
A
ALA
14
-68.76
-173.43
16
A
ALA
17
-20.26
-73.30
16
A
GLU
18
-118.16
71.91
16
A
VAL
29
-115.53
-73.24
16
A
ASP
30
-95.95
37.85
16
A
PHE
34
-83.45
-134.59
16
A
ASP
41
-103.30
70.46
16
A
MET
46
-68.56
78.70
16
A
GLN
48
-116.80
-71.30
16
A
ARG
50
-178.98
69.90
16
A
ASP
57
-80.67
-77.14
16
A
ILE
59
-80.04
38.08
16
A
ALA
64
-59.99
98.26
16
A
PRO
75
-65.90
-179.32
16
A
HIS
79
34.48
74.29
16
A
LYS
84
-31.54
120.57
16
A
LYS
95
-145.49
-107.80
16
A
GLU
101
-164.22
76.53
17
A
SER
2
56.29
96.21
17
A
LYS
11
-65.04
-150.49
17
A
ALA
14
-69.38
-171.91
17
A
ALA
17
-20.79
-73.68
17
A
GLU
18
-117.86
72.21
17
A
VAL
29
-106.39
-78.69
17
A
ASP
30
-95.62
41.48
17
A
PHE
34
-83.27
-134.68
17
A
ASP
41
-103.20
70.38
17
A
MET
46
-65.88
81.44
17
A
GLN
48
-109.86
-72.17
17
A
ARG
50
179.39
68.68
17
A
ASP
57
-80.11
-75.88
17
A
ILE
59
-79.33
39.11
17
A
ALA
64
-60.66
99.53
17
A
PRO
75
-65.79
-177.36
17
A
TYR
78
-64.26
-70.68
17
A
HIS
79
35.20
70.30
17
A
LYS
84
-37.41
124.36
17
A
LYS
95
-151.28
-106.77
17
A
GLU
101
-174.73
80.62
18
A
MET
4
-153.62
-48.29
18
A
LYS
9
-146.92
26.59
18
A
LYS
11
-68.94
-152.17
18
A
ALA
17
-20.48
-74.20
18
A
GLU
18
-118.38
71.49
18
A
VAL
29
-112.26
-73.23
18
A
ASP
30
-95.47
38.58
18
A
PHE
34
-83.22
-135.18
18
A
ASP
41
-103.03
70.92
18
A
MET
46
-69.50
80.62
18
A
GLN
48
-121.96
-64.76
18
A
ARG
50
177.14
65.60
18
A
ASP
57
-78.63
-78.93
18
A
ILE
59
-82.12
38.18
18
A
ALA
64
-60.55
94.40
18
A
HIS
79
37.43
73.65
18
A
LYS
84
-32.36
124.47
18
A
LYS
95
-145.60
-108.55
18
A
GLU
101
-174.76
83.10
19
A
LYS
11
-64.62
-163.39
19
A
ALA
14
-69.80
-170.86
19
A
ALA
17
-21.30
-74.72
19
A
GLU
18
-117.82
70.28
19
A
ASP
19
-100.12
-168.23
19
A
VAL
29
-111.71
-72.85
19
A
ASP
30
-95.90
37.83
19
A
PHE
34
-82.70
-136.48
19
A
ASP
41
-103.51
70.83
19
A
GLN
48
-110.31
-73.39
19
A
ARG
50
178.91
65.68
19
A
MET
51
-47.67
108.89
19
A
ASP
57
-80.11
-78.17
19
A
ILE
59
-78.21
37.63
19
A
ALA
64
-59.72
96.68
19
A
PRO
75
-67.47
-178.50
19
A
TYR
78
-63.74
-70.87
19
A
HIS
79
36.21
65.09
19
A
LYS
84
-32.95
125.78
19
A
LYS
95
-150.50
-111.64
19
A
GLU
101
-161.68
75.49
20
A
SER
2
60.61
179.05
20
A
LYS
9
-146.55
20.98
20
A
LYS
11
-69.09
-157.78
20
A
ALA
14
-69.24
-171.91
20
A
ALA
17
-20.81
-72.89
20
A
GLU
18
-118.23
70.53
20
A
VAL
29
-108.53
-78.67
20
A
ASP
30
-95.29
36.79
20
A
PHE
34
-82.59
-137.44
20
A
ASP
41
-103.32
70.92
20
A
MET
46
-67.35
78.70
20
A
GLN
48
-120.46
-71.30
20
A
ARG
50
175.46
68.06
20
A
ASP
57
-78.11
-76.94
20
A
ILE
59
-83.08
38.45
20
A
ALA
64
-59.83
94.27
20
A
HIS
79
32.46
73.57
20
A
LYS
84
-29.70
127.09
20
A
LYS
95
-151.05
-104.63
20
A
GLU
98
-127.27
-169.55
20
A
GLU
101
-158.70
63.24
21
A
LYS
9
-147.23
32.51
21
A
LYS
11
-63.74
-160.06
21
A
ALA
14
-68.47
-170.73
21
A
ALA
17
-20.59
-74.46
21
A
GLU
18
-117.65
69.72
21
A
ASP
19
-100.81
-168.87
21
A
VAL
29
-119.21
-76.91
21
A
ASP
30
-95.38
39.17
21
A
PHE
34
-82.67
-136.29
21
A
ASP
41
-103.36
70.46
21
A
GLN
48
-124.30
-67.00
21
A
ARG
50
178.56
68.61
21
A
ASP
57
-71.24
-77.26
21
A
ILE
59
-78.80
35.69
21
A
ALA
64
-59.40
97.15
21
A
TYR
78
-64.59
-70.57
21
A
HIS
79
35.83
75.90
21
A
LYS
84
-34.12
127.78
21
A
LYS
95
-148.61
-112.13
21
A
GLU
101
-165.10
104.11
21
A
PRO
103
-49.18
104.57
22
A
LYS
11
-67.23
-156.47
22
A
ALA
17
-20.71
-73.91
22
A
GLU
18
-118.29
72.15
22
A
VAL
29
-105.88
-82.65
22
A
ASP
30
-95.45
39.20
22
A
PHE
34
-82.46
-137.87
22
A
ASP
41
-102.85
71.40
22
A
MET
46
-68.44
78.33
22
A
GLN
48
-127.00
-68.36
22
A
ARG
50
179.77
70.68
22
A
ASP
57
-79.50
-77.94
22
A
ILE
59
-83.52
40.16
22
A
ALA
64
-59.72
99.65
22
A
PRO
75
-68.80
-175.02
22
A
TYR
78
-65.64
-72.10
22
A
HIS
79
36.59
53.22
22
A
LYS
84
-18.69
120.54
22
A
LYS
95
-145.18
-111.29
22
A
GLU
101
-147.93
52.39
22
A
LEU
105
-94.94
34.38
23
A
LYS
9
-144.43
15.54
23
A
LYS
11
-67.11
-151.48
23
A
ALA
14
-68.46
-171.93
23
A
ALA
17
-20.60
-73.78
23
A
GLU
18
-118.27
71.55
23
A
VAL
29
-94.02
-109.80
23
A
ASP
30
-93.12
40.44
23
A
GLU
35
-68.83
-75.88
23
A
ASP
41
-102.61
71.42
23
A
MET
46
-69.78
84.91
23
A
GLN
48
-108.07
-71.22
23
A
ARG
50
179.79
69.61
23
A
ASP
57
-80.37
-75.55
23
A
ILE
59
-78.53
38.06
23
A
ALA
64
-59.62
93.67
23
A
PRO
75
-68.08
-177.16
23
A
TYR
78
-66.38
-70.03
23
A
HIS
79
34.68
72.37
23
A
LYS
84
-31.04
122.32
23
A
LYS
95
-147.11
-107.78
23
A
GLU
101
177.80
57.91
24
A
SER
2
59.87
83.84
24
A
LYS
9
-147.37
29.92
24
A
LYS
11
-69.40
-159.53
24
A
ALA
14
-72.01
-167.74
24
A
ALA
17
-21.40
-73.49
24
A
GLU
18
-118.04
69.03
24
A
ASP
19
-100.26
-168.72
24
A
VAL
29
-95.36
-89.16
24
A
ASP
30
-95.14
42.60
24
A
PHE
34
-82.64
-135.89
24
A
ASP
41
-103.03
71.20
24
A
MET
46
-69.92
82.32
24
A
ARG
50
177.61
66.05
24
A
ASP
57
-79.46
-73.71
24
A
ILE
59
-80.42
36.50
24
A
ALA
64
-59.72
98.35
24
A
HIS
79
35.51
73.64
24
A
LYS
84
-32.88
127.47
24
A
LYS
95
-151.44
-112.92
24
A
GLU
101
-168.60
75.60
25
A
LYS
9
-146.83
30.69
25
A
LYS
11
-62.96
-156.46
25
A
ALA
14
-66.94
-170.82
25
A
ALA
17
-20.57
-73.50
25
A
GLU
18
-118.63
71.73
25
A
SER
28
-109.67
-168.89
25
A
VAL
29
-94.18
-108.13
25
A
ASP
30
-94.44
39.96
25
A
GLU
35
-69.19
-73.82
25
A
ASP
41
-102.66
72.00
25
A
ARG
50
175.84
61.81
25
A
ASP
57
-78.75
-77.00
25
A
ILE
59
-80.09
37.75
25
A
ALA
64
-60.07
97.70
25
A
HIS
79
34.17
67.49
25
A
LYS
84
-34.01
124.43
25
A
LYS
95
-151.95
-107.98
25
A
GLU
101
178.23
81.51
26
A
LYS
9
-145.03
14.42
26
A
LYS
11
-66.28
-153.19
26
A
ALA
14
-69.55
-172.94
26
A
ALA
17
-20.53
-73.98
26
A
GLU
18
-118.48
72.91
26
A
VAL
29
-115.25
-71.08
26
A
ASP
30
-95.89
38.59
26
A
PHE
34
-83.24
-135.82
26
A
ASP
41
-103.15
70.63
26
A
MET
46
-67.10
77.54
26
A
GLN
48
-128.99
-70.40
26
A
ARG
50
177.00
69.19
26
A
MET
51
-47.75
109.93
26
A
ASP
57
-78.55
-78.03
26
A
ILE
59
-80.20
37.65
26
A
ALA
64
-60.52
95.74
26
A
HIS
79
35.86
75.29
26
A
LYS
84
-33.99
123.27
26
A
LYS
95
-151.14
-104.98
26
A
GLU
101
-157.24
74.61
27
A
LYS
9
-147.25
33.49
27
A
LYS
11
-63.99
-158.61
27
A
ALA
14
-69.67
-169.32
27
A
ALA
17
-20.96
-74.71
27
A
GLU
18
-117.79
68.65
27
A
ASP
19
-100.54
-167.08
27
A
VAL
29
-96.04
-86.61
27
A
ASP
30
-94.86
43.03
27
A
PHE
34
-82.82
-134.19
27
A
ASP
41
-103.17
70.60
27
A
MET
46
-69.90
81.62
27
A
GLN
48
-123.90
-69.51
27
A
ARG
50
-177.80
67.79
27
A
ASP
57
-80.38
-75.51
27
A
ILE
59
-77.26
39.56
27
A
ALA
64
-60.05
98.34
27
A
TYR
78
-64.38
-71.97
27
A
HIS
79
39.52
70.93
27
A
LYS
84
-30.50
122.06
27
A
LYS
95
-148.16
-108.91
27
A
GLU
101
-166.04
75.85
28
A
MET
4
-152.94
89.77
28
A
LYS
9
-146.80
19.88
28
A
LYS
11
-68.68
-154.11
28
A
ALA
14
-69.89
-171.50
28
A
ALA
17
-20.33
-72.98
28
A
GLU
18
-118.15
72.54
28
A
ASP
30
-95.68
37.66
28
A
PHE
34
-83.45
-134.74
28
A
ASP
41
-102.82
70.48
28
A
MET
46
-69.45
78.97
28
A
GLN
48
-126.23
-64.93
28
A
ARG
50
-179.47
63.62
28
A
ASP
57
-80.17
-75.57
28
A
ILE
59
-77.80
39.66
28
A
ALA
64
-59.89
98.10
28
A
PRO
75
-69.38
-178.81
28
A
HIS
79
35.69
66.50
28
A
LYS
84
-32.46
127.01
28
A
LYS
95
-145.92
-108.69
28
A
GLU
101
-167.71
71.61
29
A
LYS
9
-147.12
26.38
29
A
LYS
11
-66.34
-156.92
29
A
ALA
14
-69.17
-172.43
29
A
ALA
17
-21.29
-71.22
29
A
GLU
18
-118.49
67.71
29
A
ASP
19
-100.96
-167.35
29
A
VAL
29
-111.96
-71.53
29
A
ASP
30
-95.71
34.79
29
A
PHE
34
-82.74
-133.70
29
A
ASP
41
-103.09
71.09
29
A
GLN
48
-124.59
-70.07
29
A
ARG
50
177.31
70.76
29
A
ASP
57
-78.91
-73.42
29
A
ILE
59
-77.48
39.05
29
A
ALA
64
-60.18
96.57
29
A
HIS
79
33.62
79.10
29
A
LYS
84
-32.67
127.88
29
A
LYS
95
-149.29
-106.70
29
A
GLU
101
-165.32
67.76
30
A
SER
2
-160.10
-46.49
30
A
LYS
9
-146.59
21.19
30
A
LYS
11
-66.67
-153.53
30
A
ALA
17
-20.30
-73.95
30
A
GLU
18
-118.46
71.79
30
A
VAL
29
-109.90
-76.11
30
A
ASP
30
-95.69
35.71
30
A
PHE
34
-82.56
-137.50
30
A
ASP
41
-103.09
70.75
30
A
MET
46
-68.80
86.77
30
A
GLN
48
-132.22
-67.91
30
A
ARG
50
39.57
67.19
30
A
ASP
57
-80.23
-75.64
30
A
ILE
59
-78.18
39.87
30
A
ALA
64
-59.92
93.25
30
A
PRO
75
-67.14
-178.12
30
A
TYR
78
-65.78
-71.10
30
A
HIS
79
37.12
76.27
30
A
LYS
84
-33.93
125.91
30
A
LYS
95
-148.58
-105.22
30
A
GLU
101
-169.43
63.78
30
A
GLU
104
-98.04
-60.91
Solution Structure of the PPIase Domain from E. coli Trigger Factor
1
N
N
A
GLY
54
A
GLY
54
HELX_P
A
ILE
59
A
ILE
59
1
1
6
ISOMERASE
mixed beta-alpha structure, Montreal-Kingston Bacterial Structural Genomics Initiative, BSGI, Structural Genomics, ISOMERASE
TIG_ECOLI
UNP
1
148
P0A850
QATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLK
GKAAKFAINLKKVEERELPELT
148
249
1L1P
5
106
P0A850
A
1
5
106
1
cloning artifact
GLY
1
1L1P
A
P0A850
UNP
1
1
cloning artifact
SER
2
1L1P
A
P0A850
UNP
2
1
cloning artifact
HIS
3
1L1P
A
P0A850
UNP
3
1
cloning artifact
MET
4
1L1P
A
P0A850
UNP
4
4
anti-parallel
anti-parallel
anti-parallel
A
LYS
38
A
LYS
38
A
MET
46
A
MET
46
A
ASP
19
A
ASP
19
A
THR
26
A
THR
26
A
ALA
88
A
ALA
88
A
GLU
98
A
GLU
98
A
PHE
68
A
PHE
68
A
VAL
72
A
VAL
72