0.012130
0.007003
0.000000
0.000000
0.014007
0.000000
0.000000
0.000000
0.026998
0.00000
0.00000
0.00000
Christendat, D.
Saridakis, V.
Kim, Y.
Kumar, P.A.
Xu, X.
Semesi, A.
Joachimiak, A.
Arrowsmith, C.H.
Edwards, A.M.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
82.440
82.440
37.040
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Protein Sci.
PRCIEI
0795
0961-8368
11
1409
1414
10.1110/ps.4720102
12021439
The crystal structure of hypothetical protein MTH1491 from Methanobacterium thermoautotrophicum.
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-06-14
CUSTOM-MADE
MAD
M
x-ray
1
0.93927
1.0
19-ID
APS
0.93927
SYNCHROTRON
APS BEAMLINE 19-ID
12753.667
hypothetical protein MTH1491
1
man
polymer
18.015
water
19
nat
water
no
yes
(MSE)VDYRVVFHIDEDDESRVLLLISNVRNL(MSE)ADLESVRIEVVAYS(MSE)GVNVLRRDSEYSGDVSELTGQGVR
FCACSNTLRASG(MSE)DGDDLLEGVDVVSSGVGHIVRRQTEGWAYIRP
MVDYRVVFHIDEDDESRVLLLISNVRNLMADLESVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSNTLRASG
MDGDDLLEGVDVVSSGVGHIVRRQTEGWAYIRP
A
APC079
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Methanothermobacter
Escherichia
Escherichia coli
sample
ORF1491
145262
Methanothermobacter thermautotrophicus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET15B
1
2.85
56.83
VAPOR DIFFUSION, HANGING DROP
7.5
30 % MPD, 100 mM HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
software
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Refinement description
1
0
2002-05-29
1
1
2008-04-28
1
2
2011-07-13
1
3
2017-10-11
_software.classification
_software.name
Y
RCSB
Y
RCSB
2002-02-19
REL
HOH
water
TIP
1001
2
HOH
HOH
1001
A
TIP
1002
2
HOH
HOH
1002
A
TIP
1003
2
HOH
HOH
1003
A
TIP
1004
2
HOH
HOH
1004
A
TIP
1006
2
HOH
HOH
1006
A
TIP
1008
2
HOH
HOH
1008
A
TIP
1009
2
HOH
HOH
1009
A
TIP
1010
2
HOH
HOH
1010
A
TIP
1011
2
HOH
HOH
1011
A
TIP
1012
2
HOH
HOH
1012
A
TIP
1013
2
HOH
HOH
1013
A
TIP
1014
2
HOH
HOH
1014
A
TIP
1015
2
HOH
HOH
1015
A
TIP
1016
2
HOH
HOH
1016
A
TIP
1017
2
HOH
HOH
1017
A
TIP
1018
2
HOH
HOH
1018
A
TIP
1019
2
HOH
HOH
1019
A
TIP
1020
2
HOH
HOH
1020
A
TIP
1021
2
HOH
HOH
1021
A
n
1
1
A
n
2
2
A
ASP
3
n
3
ASP
3
A
TYR
4
n
4
TYR
4
A
ARG
5
n
5
ARG
5
A
VAL
6
n
6
VAL
6
A
VAL
7
n
7
VAL
7
A
PHE
8
n
8
PHE
8
A
HIS
9
n
9
HIS
9
A
ILE
10
n
10
ILE
10
A
ASP
11
n
11
ASP
11
A
GLU
12
n
12
GLU
12
A
ASP
13
n
13
ASP
13
A
ASP
14
n
14
ASP
14
A
GLU
15
n
15
GLU
15
A
SER
16
n
16
SER
16
A
ARG
17
n
17
ARG
17
A
VAL
18
n
18
VAL
18
A
LEU
19
n
19
LEU
19
A
LEU
20
n
20
LEU
20
A
LEU
21
n
21
LEU
21
A
ILE
22
n
22
ILE
22
A
SER
23
n
23
SER
23
A
ASN
24
n
24
ASN
24
A
VAL
25
n
25
VAL
25
A
ARG
26
n
26
ARG
26
A
ASN
27
n
27
ASN
27
A
LEU
28
n
28
LEU
28
A
MSE
29
n
29
MSE
29
A
ALA
30
n
30
ALA
30
A
ASP
31
n
31
ASP
31
A
LEU
32
n
32
LEU
32
A
GLU
33
n
33
GLU
33
A
SER
34
n
34
SER
34
A
VAL
35
n
35
VAL
35
A
ARG
36
n
36
ARG
36
A
ILE
37
n
37
ILE
37
A
GLU
38
n
38
GLU
38
A
VAL
39
n
39
VAL
39
A
VAL
40
n
40
VAL
40
A
ALA
41
n
41
ALA
41
A
TYR
42
n
42
TYR
42
A
SER
43
n
43
SER
43
A
MSE
44
n
44
MSE
44
A
GLY
45
n
45
GLY
45
A
VAL
46
n
46
VAL
46
A
ASN
47
n
47
ASN
47
A
VAL
48
n
48
VAL
48
A
LEU
49
n
49
LEU
49
A
ARG
50
n
50
ARG
50
A
ARG
51
n
51
ARG
51
A
ASP
52
n
52
ASP
52
A
SER
53
n
53
SER
53
A
GLU
54
n
54
GLU
54
A
TYR
55
n
55
TYR
55
A
SER
56
n
56
SER
56
A
GLY
57
n
57
GLY
57
A
ASP
58
n
58
ASP
58
A
VAL
59
n
59
VAL
59
A
SER
60
n
60
SER
60
A
GLU
61
n
61
GLU
61
A
LEU
62
n
62
LEU
62
A
THR
63
n
63
THR
63
A
GLY
64
n
64
GLY
64
A
GLN
65
n
65
GLN
65
A
GLY
66
n
66
GLY
66
A
VAL
67
n
67
VAL
67
A
ARG
68
n
68
ARG
68
A
PHE
69
n
69
PHE
69
A
CYS
70
n
70
CYS
70
A
ALA
71
n
71
ALA
71
A
CYS
72
n
72
CYS
72
A
SER
73
n
73
SER
73
A
ASN
74
n
74
ASN
74
A
THR
75
n
75
THR
75
A
LEU
76
n
76
LEU
76
A
ARG
77
n
77
ARG
77
A
ALA
78
n
78
ALA
78
A
SER
79
n
79
SER
79
A
GLY
80
n
80
GLY
80
A
MSE
81
n
81
MSE
81
A
ASP
82
n
82
ASP
82
A
GLY
83
n
83
GLY
83
A
ASP
84
n
84
ASP
84
A
ASP
85
n
85
ASP
85
A
LEU
86
n
86
LEU
86
A
LEU
87
n
87
LEU
87
A
GLU
88
n
88
GLU
88
A
GLY
89
n
89
GLY
89
A
VAL
90
n
90
VAL
90
A
ASP
91
n
91
ASP
91
A
VAL
92
n
92
VAL
92
A
VAL
93
n
93
VAL
93
A
SER
94
n
94
SER
94
A
SER
95
n
95
SER
95
A
GLY
96
n
96
GLY
96
A
VAL
97
n
97
VAL
97
A
GLY
98
n
98
GLY
98
A
HIS
99
n
99
HIS
99
A
ILE
100
n
100
ILE
100
A
VAL
101
n
101
VAL
101
A
ARG
102
n
102
ARG
102
A
ARG
103
n
103
ARG
103
A
GLN
104
n
104
GLN
104
A
THR
105
n
105
THR
105
A
GLU
106
n
106
GLU
106
A
GLY
107
n
107
GLY
107
A
TRP
108
n
108
TRP
108
A
ALA
109
n
109
ALA
109
A
TYR
110
n
110
TYR
110
A
ILE
111
n
111
ILE
111
A
ARG
112
n
112
ARG
112
A
PRO
113
n
113
PRO
113
A
author_and_software_defined_assembly
PISA,PQS
3
trimeric
3950
-18
13610
A
MSE
29
SELENOMETHIONINE
A
MSE
29
MET
A
MSE
44
SELENOMETHIONINE
A
MSE
44
MET
A
MSE
81
SELENOMETHIONINE
A
MSE
81
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-y+1,x-y+1,z
crystal symmetry operation
41.2200000000
71.3951342880
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_565
-x+y,-x+1,z
crystal symmetry operation
-41.2200000000
71.3951342880
0.0000000000
A
O
VAL
93
A
O
VAL
93
A
N
ALA
71
A
N
ALA
71
A
O
CYS
70
A
O
CYS
70
A
N
VAL
39
A
N
VAL
39
A
O
GLU
38
A
O
GLU
38
A
N
PHE
8
A
N
PHE
8
A
N
VAL
7
A
N
VAL
7
A
O
ALA
109
A
O
ALA
109
1
A
MSE
1
A
MSE
1
1
Y
1
A
VAL
2
A
VAL
2
1
Y
1
A
SER
43
54.23
-141.74
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
26.4
-0.24
6.27
0.00
-0.24
0.00
0.48
0.226
0.009
0.202
0.202
2.30
27.55
579
12028
11538
5.0
92.2
RANDOM
1761771.48
0.000000
1
RESTRAINED
THROUGHOUT
2.0
MAD
FLAT MODEL
32.2413
0.371473
0.28
0.25
5.00
0.15
0.12
2.30
27.55
19
881
0
0
862
0.007
1.1
23.2
0.71
1.02
1.50
1.71
2.00
1.72
2.00
2.56
2.50
0.228
0.027
0.203
2.44
72
1561
6
4.4
78.9
13.8
2.30
27.55
1L1S
12028
12028
0.071
0.064
1
32.6
12
92.2
0.313
2.30
2.38
7.6
652
0.25
1
11
99.8
data scaling
d*TREK
data scaling
SCALEPACK
refinement
CNS
data reduction
d*TREK
phasing
CNS
hypothetical protein MTH1491
Structure of Protein of Unknown Function MTH1491 from Methanobacterium thermoautotrophicum
1
N
N
2
N
N
A
ASP
14
A
ASP
14
HELX_P
A
LEU
32
A
LEU
32
1
1
19
A
SER
43
A
SER
43
HELX_P
A
ARG
50
A
ARG
50
5
2
8
A
TYR
55
A
TYR
55
HELX_P
A
GLN
65
A
GLN
65
1
3
11
A
SER
73
A
SER
73
HELX_P
A
SER
79
A
SER
79
1
4
7
A
ASP
82
A
ASP
82
HELX_P
A
LEU
86
A
LEU
86
5
5
5
A
SER
95
A
SER
95
HELX_P
A
GLU
106
A
GLU
106
1
6
12
covale
1.328
A
LEU
28
A
C
LEU
28
1_555
A
MSE
29
A
N
MSE
29
1_555
covale
1.329
A
MSE
29
A
C
MSE
29
1_555
A
ALA
30
A
N
ALA
30
1_555
covale
1.325
A
SER
43
A
C
SER
43
1_555
A
MSE
44
A
N
MSE
44
1_555
covale
1.329
A
MSE
44
A
C
MSE
44
1_555
A
GLY
45
A
N
GLY
45
1_555
covale
1.328
A
GLY
80
A
C
GLY
80
1_555
A
MSE
81
A
N
MSE
81
1_555
covale
1.327
A
MSE
81
A
C
MSE
81
1_555
A
ASP
82
A
N
ASP
82
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Structural Genomics, Hypothetical Protein, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
O27535_METTH
UNP
1
1
O27535
MVDYRVVFHIDEDDESRVLLLISNVRNLMADLESVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRFCACSNTLRASG
MDGDDLLEGVDVVSSGVGHIVRRQTEGWAYIRP
1
113
1L1S
1
113
O27535
A
1
1
113
1
MET
MODIFIED RESIDUE
MSE
1
1L1S
A
O27535
UNP
1
1
1
MET
MODIFIED RESIDUE
MSE
29
1L1S
A
O27535
UNP
29
29
1
MET
MODIFIED RESIDUE
MSE
44
1L1S
A
O27535
UNP
44
44
1
MET
MODIFIED RESIDUE
MSE
81
1L1S
A
O27535
UNP
81
81
5
parallel
parallel
parallel
parallel
A
ASP
91
A
ASP
91
A
VAL
93
A
VAL
93
A
ARG
68
A
ARG
68
A
CYS
72
A
CYS
72
A
VAL
35
A
VAL
35
A
ALA
41
A
ALA
41
A
TYR
4
A
TYR
4
A
ILE
10
A
ILE
10
A
ALA
109
A
ALA
109
A
ILE
111
A
ILE
111
173
P 63