0.018556
0.000000
0.000000
0.000000
0.018556
0.000000
0.000000
0.000000
0.012927
0.000000
0.000000
0.000000
Rudolph, M.G.
Kelker, M.S.
Schneider, T.R.
Yeates, T.O.
Oseroff, V.
Heidary, D.K.
Jennings, P.A.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
53.890
53.890
77.360
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
59
290
298
10.1107/S0907444902021704
12554939
Use of multiple anomalous dispersion to phase highly merohedrally twinned crystals of interleukin-1beta.
2003
10.2210/pdb1l2h/pdb
pdb_00001l2h
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100
1
CCD
2000-11-22
CUSTOM-MADE
Double crystal monochromator Si-111
SINGLE WAVELENGTH
M
x-ray
1
1.03320
1.0
19-ID
APS
1.03320
SYNCHROTRON
APS BEAMLINE 19-ID
17395.834
Interleukin 1-beta
F42W, W120F
1
man
polymer
18.015
water
126
nat
water
no
no
APVRSLNCTLRDSQQKSLVMSGPYELKALHLQGQDMEQQVVWSMSFVQGEESNDKIPVALGLKEKNLYLSCVLKDDKPTL
QLESVDPKNYPKKKMEKRFVFNKIEINNKLEFESAQFPNFYISTSQAENMPVFLGGTKGGQDITDFTMQFVSS
APVRSLNCTLRDSQQKSLVMSGPYELKALHLQGQDMEQQVVWSMSFVQGEESNDKIPVALGLKEKNLYLSCVLKDDKPTL
QLESVDPKNYPKKKMEKRFVFNKIEINNKLEFESAQFPNFYISTSQAENMPVFLGGTKGGQDITDFTMQFVSS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
1
2.93
61.89
VAPOR DIFFUSION
ammonium sulphate, DTT, PIPES, VAPOR DIFFUSION, temperature 295K
295
database_2
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
1
0
2003-02-04
1
1
2008-04-28
1
2
2011-07-13
1
3
2021-10-27
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
HUMAN INTERLEUKIN-1 BETA
RCSB
Y
RCSB
2002-02-21
REL
REL
HOH
water
HOH
1
2
HOH
HOH
154
A
HOH
2
2
HOH
HOH
155
A
HOH
3
2
HOH
HOH
156
A
HOH
4
2
HOH
HOH
157
A
HOH
5
2
HOH
HOH
158
A
HOH
6
2
HOH
HOH
159
A
HOH
7
2
HOH
HOH
160
A
HOH
8
2
HOH
HOH
161
A
HOH
9
2
HOH
HOH
162
A
HOH
10
2
HOH
HOH
163
A
HOH
11
2
HOH
HOH
164
A
HOH
12
2
HOH
HOH
165
A
HOH
13
2
HOH
HOH
166
A
HOH
14
2
HOH
HOH
167
A
HOH
15
2
HOH
HOH
168
A
HOH
16
2
HOH
HOH
169
A
HOH
17
2
HOH
HOH
170
A
HOH
18
2
HOH
HOH
171
A
HOH
19
2
HOH
HOH
172
A
HOH
20
2
HOH
HOH
173
A
HOH
21
2
HOH
HOH
174
A
HOH
22
2
HOH
HOH
175
A
HOH
23
2
HOH
HOH
176
A
HOH
24
2
HOH
HOH
177
A
HOH
25
2
HOH
HOH
178
A
HOH
26
2
HOH
HOH
179
A
HOH
27
2
HOH
HOH
180
A
HOH
28
2
HOH
HOH
181
A
HOH
29
2
HOH
HOH
182
A
HOH
30
2
HOH
HOH
183
A
HOH
31
2
HOH
HOH
184
A
HOH
32
2
HOH
HOH
185
A
HOH
33
2
HOH
HOH
186
A
HOH
34
2
HOH
HOH
187
A
HOH
35
2
HOH
HOH
188
A
HOH
36
2
HOH
HOH
189
A
HOH
37
2
HOH
HOH
190
A
HOH
38
2
HOH
HOH
191
A
HOH
39
2
HOH
HOH
192
A
HOH
40
2
HOH
HOH
193
A
HOH
41
2
HOH
HOH
194
A
HOH
42
2
HOH
HOH
195
A
HOH
43
2
HOH
HOH
196
A
HOH
44
2
HOH
HOH
197
A
HOH
45
2
HOH
HOH
198
A
HOH
46
2
HOH
HOH
199
A
HOH
47
2
HOH
HOH
200
A
HOH
48
2
HOH
HOH
201
A
HOH
49
2
HOH
HOH
202
A
HOH
50
2
HOH
HOH
203
A
HOH
51
2
HOH
HOH
204
A
HOH
52
2
HOH
HOH
205
A
HOH
53
2
HOH
HOH
206
A
HOH
54
2
HOH
HOH
207
A
HOH
55
2
HOH
HOH
208
A
HOH
56
2
HOH
HOH
209
A
HOH
57
2
HOH
HOH
210
A
HOH
58
2
HOH
HOH
211
A
HOH
59
2
HOH
HOH
212
A
HOH
60
2
HOH
HOH
213
A
HOH
61
2
HOH
HOH
214
A
HOH
62
2
HOH
HOH
215
A
HOH
63
2
HOH
HOH
216
A
HOH
64
2
HOH
HOH
217
A
HOH
65
2
HOH
HOH
218
A
HOH
66
2
HOH
HOH
219
A
HOH
67
2
HOH
HOH
220
A
HOH
68
2
HOH
HOH
221
A
HOH
69
2
HOH
HOH
222
A
HOH
70
2
HOH
HOH
223
A
HOH
71
2
HOH
HOH
224
A
HOH
72
2
HOH
HOH
225
A
HOH
73
2
HOH
HOH
226
A
HOH
74
2
HOH
HOH
227
A
HOH
75
2
HOH
HOH
228
A
HOH
76
2
HOH
HOH
229
A
HOH
77
2
HOH
HOH
230
A
HOH
78
2
HOH
HOH
231
A
HOH
79
2
HOH
HOH
232
A
HOH
80
2
HOH
HOH
233
A
HOH
81
2
HOH
HOH
234
A
HOH
82
2
HOH
HOH
235
A
HOH
83
2
HOH
HOH
236
A
HOH
84
2
HOH
HOH
237
A
HOH
85
2
HOH
HOH
238
A
HOH
86
2
HOH
HOH
239
A
HOH
87
2
HOH
HOH
240
A
HOH
88
2
HOH
HOH
241
A
HOH
89
2
HOH
HOH
242
A
HOH
90
2
HOH
HOH
243
A
HOH
91
2
HOH
HOH
244
A
HOH
92
2
HOH
HOH
245
A
HOH
93
2
HOH
HOH
246
A
HOH
94
2
HOH
HOH
247
A
HOH
95
2
HOH
HOH
248
A
HOH
96
2
HOH
HOH
249
A
HOH
97
2
HOH
HOH
250
A
HOH
98
2
HOH
HOH
251
A
HOH
99
2
HOH
HOH
252
A
HOH
100
2
HOH
HOH
253
A
HOH
101
2
HOH
HOH
254
A
HOH
102
2
HOH
HOH
255
A
HOH
103
2
HOH
HOH
256
A
HOH
104
2
HOH
HOH
257
A
HOH
105
2
HOH
HOH
258
A
HOH
106
2
HOH
HOH
259
A
HOH
107
2
HOH
HOH
260
A
HOH
108
2
HOH
HOH
261
A
HOH
109
2
HOH
HOH
262
A
HOH
110
2
HOH
HOH
263
A
HOH
111
2
HOH
HOH
264
A
HOH
112
2
HOH
HOH
265
A
HOH
113
2
HOH
HOH
266
A
HOH
114
2
HOH
HOH
267
A
HOH
115
2
HOH
HOH
268
A
HOH
116
2
HOH
HOH
269
A
HOH
117
2
HOH
HOH
270
A
HOH
118
2
HOH
HOH
271
A
HOH
119
2
HOH
HOH
272
A
HOH
120
2
HOH
HOH
273
A
HOH
121
2
HOH
HOH
274
A
HOH
122
2
HOH
HOH
275
A
HOH
123
2
HOH
HOH
276
A
HOH
124
2
HOH
HOH
277
A
HOH
125
2
HOH
HOH
278
A
HOH
126
2
HOH
HOH
279
A
n
1
1
A
n
2
2
A
n
3
3
A
ARG
4
n
4
ARG
4
A
SER
5
n
5
SER
5
A
LEU
6
n
6
LEU
6
A
ASN
7
n
7
ASN
7
A
CYS
8
n
8
CYS
8
A
THR
9
n
9
THR
9
A
LEU
10
n
10
LEU
10
A
ARG
11
n
11
ARG
11
A
ASP
12
n
12
ASP
12
A
SER
13
n
13
SER
13
A
GLN
14
n
14
GLN
14
A
GLN
15
n
15
GLN
15
A
LYS
16
n
16
LYS
16
A
SER
17
n
17
SER
17
A
LEU
18
n
18
LEU
18
A
VAL
19
n
19
VAL
19
A
MET
20
n
20
MET
20
A
SER
21
n
21
SER
21
A
GLY
22
n
22
GLY
22
A
PRO
23
n
23
PRO
23
A
TYR
24
n
24
TYR
24
A
GLU
25
n
25
GLU
25
A
LEU
26
n
26
LEU
26
A
LYS
27
n
27
LYS
27
A
ALA
28
n
28
ALA
28
A
LEU
29
n
29
LEU
29
A
HIS
30
n
30
HIS
30
A
LEU
31
n
31
LEU
31
A
GLN
32
n
32
GLN
32
A
GLY
33
n
33
GLY
33
A
GLN
34
n
34
GLN
34
A
ASP
35
n
35
ASP
35
A
MET
36
n
36
MET
36
A
GLU
37
n
37
GLU
37
A
GLN
38
n
38
GLN
38
A
GLN
39
n
39
GLN
39
A
VAL
40
n
40
VAL
40
A
VAL
41
n
41
VAL
41
A
TRP
42
n
42
TRP
42
A
SER
43
n
43
SER
43
A
MET
44
n
44
MET
44
A
SER
45
n
45
SER
45
A
PHE
46
n
46
PHE
46
A
VAL
47
n
47
VAL
47
A
GLN
48
n
48
GLN
48
A
GLY
49
n
49
GLY
49
A
GLU
50
n
50
GLU
50
A
GLU
51
n
51
GLU
51
A
SER
52
n
52
SER
52
A
ASN
53
n
53
ASN
53
A
n
54
54
A
LYS
55
n
55
LYS
55
A
ILE
56
n
56
ILE
56
A
PRO
57
n
57
PRO
57
A
VAL
58
n
58
VAL
58
A
ALA
59
n
59
ALA
59
A
LEU
60
n
60
LEU
60
A
GLY
61
n
61
GLY
61
A
LEU
62
n
62
LEU
62
A
LYS
63
n
63
LYS
63
A
GLU
64
n
64
GLU
64
A
LYS
65
n
65
LYS
65
A
ASN
66
n
66
ASN
66
A
LEU
67
n
67
LEU
67
A
TYR
68
n
68
TYR
68
A
LEU
69
n
69
LEU
69
A
SER
70
n
70
SER
70
A
CYS
71
n
71
CYS
71
A
VAL
72
n
72
VAL
72
A
LEU
73
n
73
LEU
73
A
LYS
74
n
74
LYS
74
A
ASP
75
n
75
ASP
75
A
ASP
76
n
76
ASP
76
A
LYS
77
n
77
LYS
77
A
PRO
78
n
78
PRO
78
A
THR
79
n
79
THR
79
A
LEU
80
n
80
LEU
80
A
GLN
81
n
81
GLN
81
A
LEU
82
n
82
LEU
82
A
GLU
83
n
83
GLU
83
A
SER
84
n
84
SER
84
A
VAL
85
n
85
VAL
85
A
ASP
86
n
86
ASP
86
A
PRO
87
n
87
PRO
87
A
LYS
88
n
88
LYS
88
A
ASN
89
n
89
ASN
89
A
TYR
90
n
90
TYR
90
A
PRO
91
n
91
PRO
91
A
LYS
92
n
92
LYS
92
A
LYS
93
n
93
LYS
93
A
LYS
94
n
94
LYS
94
A
MET
95
n
95
MET
95
A
GLU
96
n
96
GLU
96
A
LYS
97
n
97
LYS
97
A
ARG
98
n
98
ARG
98
A
PHE
99
n
99
PHE
99
A
VAL
100
n
100
VAL
100
A
PHE
101
n
101
PHE
101
A
ASN
102
n
102
ASN
102
A
LYS
103
n
103
LYS
103
A
ILE
104
n
104
ILE
104
A
GLU
105
n
105
GLU
105
A
ILE
106
n
106
ILE
106
A
ASN
107
n
107
ASN
107
A
ASN
108
n
108
ASN
108
A
LYS
109
n
109
LYS
109
A
LEU
110
n
110
LEU
110
A
GLU
111
n
111
GLU
111
A
PHE
112
n
112
PHE
112
A
GLU
113
n
113
GLU
113
A
SER
114
n
114
SER
114
A
ALA
115
n
115
ALA
115
A
GLN
116
n
116
GLN
116
A
PHE
117
n
117
PHE
117
A
PRO
118
n
118
PRO
118
A
ASN
119
n
119
ASN
119
A
PHE
120
n
120
PHE
120
A
TYR
121
n
121
TYR
121
A
ILE
122
n
122
ILE
122
A
SER
123
n
123
SER
123
A
THR
124
n
124
THR
124
A
SER
125
n
125
SER
125
A
GLN
126
n
126
GLN
126
A
ALA
127
n
127
ALA
127
A
GLU
128
n
128
GLU
128
A
ASN
129
n
129
ASN
129
A
MET
130
n
130
MET
130
A
PRO
131
n
131
PRO
131
A
VAL
132
n
132
VAL
132
A
PHE
133
n
133
PHE
133
A
LEU
134
n
134
LEU
134
A
GLY
135
n
135
GLY
135
A
n
136
136
A
n
137
137
A
n
138
138
A
n
139
139
A
GLY
140
n
140
GLY
140
A
GLN
141
n
141
GLN
141
A
ASP
142
n
142
ASP
142
A
ILE
143
n
143
ILE
143
A
THR
144
n
144
THR
144
A
ASP
145
n
145
ASP
145
A
PHE
146
n
146
PHE
146
A
THR
147
n
147
THR
147
A
MET
148
n
148
MET
148
A
GLN
149
n
149
GLN
149
A
PHE
150
n
150
PHE
150
A
VAL
151
n
151
VAL
151
A
SER
152
n
152
SER
152
A
n
153
153
A
0.145
0.154
0.182
1362
4.3
4.8
27120
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
CYS
8
A
N
CYS
8
A
O
TRP
42
A
O
TRP
42
A
N
SER
43
A
N
SER
43
A
O
GLY
61
A
O
GLY
61
A
N
VAL
58
A
N
VAL
58
A
O
PHE
101
A
O
PHE
101
A
N
ASN
102
A
N
ASN
102
A
O
GLU
113
A
O
GLU
113
A
N
LEU
110
A
N
LEU
110
A
O
PHE
146
A
O
PHE
146
A
O
THR
147
A
O
THR
147
A
N
ARG
11
A
N
ARG
11
A
N
SER
17
A
N
SER
17
A
O
LEU
29
A
O
LEU
29
A
N
ALA
28
A
N
ALA
28
A
O
MET
130
A
O
MET
130
A
N
SER
70
A
N
SER
70
A
O
GLN
81
A
O
GLN
81
A
N
SER
123
A
N
SER
123
A
O
PHE
133
A
O
PHE
133
1
A
ALA
1
A
ALA
1
1
Y
1
A
PRO
2
A
PRO
2
1
Y
1
A
VAL
3
A
VAL
3
1
Y
1
A
ASP
54
A
ASP
54
1
Y
1
A
GLY
136
A
GLY
136
1
Y
1
A
THR
137
A
THR
137
1
Y
1
A
LYS
138
A
LYS
138
1
Y
1
A
GLY
139
A
GLY
139
1
Y
1
A
SER
153
A
SER
153
1
Y
1
4.68
0.50
120.30
124.98
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
4
4
4
N
1
-6.90
0.90
118.30
111.40
A
A
A
CB
CG
OD2
ASP
ASP
ASP
12
12
12
N
1
-5.29
0.60
121.00
115.71
A
A
A
CB
CG
CD1
TYR
TYR
TYR
68
68
68
N
1
-4.08
0.50
120.30
116.22
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
98
98
98
N
1
-4.93
0.80
121.30
116.37
A
A
A
CG
CD1
CE1
TYR
TYR
TYR
121
121
121
N
26.9
BULK SOLVENT MODELING METHOD USED:
MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228
0.193
0.154
1.54
18.00
5180
1519
31781
31781
4759
4.8
92.7
RANDOM
1
Isotropic
FREE R
0.0
MAD
Engh & Huber
0.19
0.15
5.0
0.20
0.16
3
1164.00
1287.00
1.54
18.00
126
1294
0
0
1168
0.012
0.030
0.000
0.0347
0.056
0.063
0.042
0.000
0.072
0.000
0.4
0.32
1.6
121
2752
93.24
22.7
1.54
20
1L2H
31800
0
0.074
1
23.4
7.6
97.1
1.54
1.60
2.6
3196
0.516
5.2
98.2
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
refinement
SHELXL-97
Crystal structure of Interleukin 1-beta F42W/W120F mutant
1
N
N
2
N
N
A
GLN
32
A
GLN
32
HELX_P
A
GLN
39
A
GLN
39
5
1
8
A
GLU
96
A
GLU
96
HELX_P
A
PHE
99
A
PHE
99
5
2
4
IMMUNE SYSTEM
Interleukin-1 beta, beta-trefoil, F42W/W120F double mutant, protein folding, MAD phasing, hemihedral twinning, IMMUNE SYSTEM
A
TYR
90
A
TYR
90
1
A
PRO
91
A
PRO
91
1.91
IL1B_HUMAN
UNP
1
117
P01584
APVRSLNCTLRDSQQKSLVMSGPYELKALHLQGQDMEQQVVFSMSFVQGEESNDKIPVALGLKEKNLYLSCVLKDDKPTL
QLESVDPKNYPKKKMEKRFVFNKIEINNKLEFESAQFPNWYISTSQAENMPVFLGGTKGGQDITDFTMQFVSS
117
269
1L2H
1
153
P01584
A
1
1
153
1
PHE
engineered mutation
TRP
42
1L2H
A
P01584
UNP
158
42
1
TRP
engineered mutation
PHE
120
1L2H
A
P01584
UNP
236
120
7
3
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
5
A
SER
5
A
ASP
12
A
ASP
12
A
TRP
42
A
TRP
42
A
PHE
46
A
PHE
46
A
ILE
56
A
ILE
56
A
LEU
62
A
LEU
62
A
PHE
101
A
PHE
101
A
ILE
106
A
ILE
106
A
LYS
109
A
LYS
109
A
SER
114
A
SER
114
A
PHE
146
A
PHE
146
A
PHE
150
A
PHE
150
A
SER
5
A
SER
5
A
ASP
12
A
ASP
12
A
SER
17
A
SER
17
A
MET
20
A
MET
20
A
LEU
26
A
LEU
26
A
LEU
29
A
LEU
29
A
MET
130
A
MET
130
A
PRO
131
A
PRO
131
A
LEU
67
A
LEU
67
A
LYS
74
A
LYS
74
A
LYS
77
A
LYS
77
A
SER
84
A
SER
84
A
TYR
121
A
TYR
121
A
SER
123
A
SER
123
A
PHE
133
A
PHE
133
A
GLY
135
A
GLY
135
78
P 43