0.006420
0.000000
0.000000
0.000000
0.006420
0.000000
0.000000
0.000000
0.006420
0.00000
0.00000
0.00000
Erzberger, J.P.
Pirruccello, M.M.
Berger, J.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
155.752
155.752
155.752
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Embo J.
EMJODG
0897
0261-4189
21
4763
4773
10.1093/emboj/cdf496
12234917
The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-12-21
ADSC QUANTUM 210
MAD
M
x-ray
1
0.9797
1.0
1.1272
1.0
8.3.1
ALS
0.9797,1.1272
SYNCHROTRON
ALS BEAMLINE 8.3.1
38049.562
Chromosomal replication initiator protein dnaA
Residues 76-399
1
man
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
47
nat
water
no
yes
KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQA
(MSE)VEHLKKGTINEFRN(MSE)YKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDR
LVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKL
(MSE)QIVEFVANYYAVKVEDILSDKRNKRTSEARKIA(MSE)YLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEK
KKDRKFKHLVGFLEKQAFDKIC
KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAM
VEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGI
LVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANY
YAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAF
DKIC
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Aquifex
Escherichia
sample
DNAA
63363
Aquifex aeolicus
562
Escherichia coli
BL21 RIL
PLASMID
pSV272
2
4.14
67.0
VAPOR DIFFUSION, HANGING DROP
5.0
sodium acetate, potassium chloride, hexanediol, PEG MME 2000, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K
294
repository
Initial release
Version format compliance
Advisory
Version format compliance
1
0
2002-09-25
1
1
2008-04-28
1
2
2011-07-13
RCSB
Y
RCSB
2002-03-21
REL
REL
MG
MAGNESIUM ION
ADP
ADENOSINE-5'-DIPHOSPHATE
HOH
water
MG
399
2
MG
MG
401
A
ADP
400
3
ADP
ADP
400
A
HOH
1
4
HOH
HOH
1
A
HOH
2
4
HOH
HOH
2
A
HOH
3
4
HOH
HOH
3
A
HOH
4
4
HOH
HOH
4
A
HOH
5
4
HOH
HOH
5
A
HOH
6
4
HOH
HOH
6
A
HOH
7
4
HOH
HOH
7
A
HOH
8
4
HOH
HOH
8
A
HOH
9
4
HOH
HOH
9
A
HOH
10
4
HOH
HOH
10
A
HOH
11
4
HOH
HOH
11
A
HOH
12
4
HOH
HOH
12
A
HOH
13
4
HOH
HOH
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
21
4
HOH
HOH
21
A
HOH
22
4
HOH
HOH
22
A
HOH
23
4
HOH
HOH
23
A
HOH
24
4
HOH
HOH
24
A
HOH
25
4
HOH
HOH
25
A
HOH
26
4
HOH
HOH
26
A
HOH
27
4
HOH
HOH
27
A
HOH
28
4
HOH
HOH
28
A
HOH
29
4
HOH
HOH
29
A
HOH
30
4
HOH
HOH
30
A
HOH
31
4
HOH
HOH
31
A
HOH
32
4
HOH
HOH
32
A
HOH
33
4
HOH
HOH
33
A
HOH
34
4
HOH
HOH
34
A
HOH
35
4
HOH
HOH
35
A
HOH
36
4
HOH
HOH
36
A
HOH
37
4
HOH
HOH
37
A
HOH
38
4
HOH
HOH
38
A
HOH
39
4
HOH
HOH
39
A
HOH
40
4
HOH
HOH
40
A
HOH
41
4
HOH
HOH
41
A
HOH
42
4
HOH
HOH
42
A
HOH
43
4
HOH
HOH
43
A
HOH
44
4
HOH
HOH
44
A
HOH
45
4
HOH
HOH
45
A
HOH
46
4
HOH
HOH
46
A
HOH
47
4
HOH
HOH
47
A
n
1
76
A
ASP
77
n
2
ASP
77
A
PHE
78
n
3
PHE
78
A
LEU
79
n
4
LEU
79
A
ASN
80
n
5
ASN
80
A
PRO
81
n
6
PRO
81
A
LYS
82
n
7
LYS
82
A
TYR
83
n
8
TYR
83
A
THR
84
n
9
THR
84
A
LEU
85
n
10
LEU
85
A
GLU
86
n
11
GLU
86
A
ASN
87
n
12
ASN
87
A
PHE
88
n
13
PHE
88
A
ILE
89
n
14
ILE
89
A
VAL
90
n
15
VAL
90
A
GLY
91
n
16
GLY
91
A
GLU
92
n
17
GLU
92
A
GLY
93
n
18
GLY
93
A
ASN
94
n
19
ASN
94
A
ARG
95
n
20
ARG
95
A
LEU
96
n
21
LEU
96
A
ALA
97
n
22
ALA
97
A
TYR
98
n
23
TYR
98
A
GLU
99
n
24
GLU
99
A
VAL
100
n
25
VAL
100
A
VAL
101
n
26
VAL
101
A
LYS
102
n
27
LYS
102
A
GLU
103
n
28
GLU
103
A
ALA
104
n
29
ALA
104
A
LEU
105
n
30
LEU
105
A
GLU
106
n
31
GLU
106
A
ASN
107
n
32
ASN
107
A
LEU
108
n
33
LEU
108
A
GLY
109
n
34
GLY
109
A
SER
110
n
35
SER
110
A
LEU
111
n
36
LEU
111
A
TYR
112
n
37
TYR
112
A
ASN
113
n
38
ASN
113
A
PRO
114
n
39
PRO
114
A
ILE
115
n
40
ILE
115
A
PHE
116
n
41
PHE
116
A
ILE
117
n
42
ILE
117
A
TYR
118
n
43
TYR
118
A
GLY
119
n
44
GLY
119
A
SER
120
n
45
SER
120
A
VAL
121
n
46
VAL
121
A
GLY
122
n
47
GLY
122
A
THR
123
n
48
THR
123
A
GLY
124
n
49
GLY
124
A
LYS
125
n
50
LYS
125
A
THR
126
n
51
THR
126
A
HIS
127
n
52
HIS
127
A
LEU
128
n
53
LEU
128
A
LEU
129
n
54
LEU
129
A
GLN
130
n
55
GLN
130
A
ALA
131
n
56
ALA
131
A
ALA
132
n
57
ALA
132
A
GLY
133
n
58
GLY
133
A
ASN
134
n
59
ASN
134
A
GLU
135
n
60
GLU
135
A
ALA
136
n
61
ALA
136
A
LYS
137
n
62
LYS
137
A
LYS
138
n
63
LYS
138
A
ARG
139
n
64
ARG
139
A
GLY
140
n
65
GLY
140
A
TYR
141
n
66
TYR
141
A
ARG
142
n
67
ARG
142
A
VAL
143
n
68
VAL
143
A
ILE
144
n
69
ILE
144
A
TYR
145
n
70
TYR
145
A
SER
146
n
71
SER
146
A
SER
147
n
72
SER
147
A
ALA
148
n
73
ALA
148
A
ASP
149
n
74
ASP
149
A
ASP
150
n
75
ASP
150
A
PHE
151
n
76
PHE
151
A
ALA
152
n
77
ALA
152
A
GLN
153
n
78
GLN
153
A
ALA
154
n
79
ALA
154
A
MSE
155
n
80
MSE
155
A
VAL
156
n
81
VAL
156
A
GLU
157
n
82
GLU
157
A
HIS
158
n
83
HIS
158
A
LEU
159
n
84
LEU
159
A
LYS
160
n
85
LYS
160
A
LYS
161
n
86
LYS
161
A
GLY
162
n
87
GLY
162
A
THR
163
n
88
THR
163
A
ILE
164
n
89
ILE
164
A
ASN
165
n
90
ASN
165
A
GLU
166
n
91
GLU
166
A
PHE
167
n
92
PHE
167
A
ARG
168
n
93
ARG
168
A
ASN
169
n
94
ASN
169
A
MSE
170
n
95
MSE
170
A
TYR
171
n
96
TYR
171
A
LYS
172
n
97
LYS
172
A
SER
173
n
98
SER
173
A
VAL
174
n
99
VAL
174
A
ASP
175
n
100
ASP
175
A
LEU
176
n
101
LEU
176
A
LEU
177
n
102
LEU
177
A
LEU
178
n
103
LEU
178
A
LEU
179
n
104
LEU
179
A
ASP
180
n
105
ASP
180
A
ASP
181
n
106
ASP
181
A
VAL
182
n
107
VAL
182
A
GLN
183
n
108
GLN
183
A
PHE
184
n
109
PHE
184
A
LEU
185
n
110
LEU
185
A
SER
186
n
111
SER
186
A
GLY
187
n
112
GLY
187
A
LYS
188
n
113
LYS
188
A
GLU
189
n
114
GLU
189
A
ARG
190
n
115
ARG
190
A
THR
191
n
116
THR
191
A
GLN
192
n
117
GLN
192
A
ILE
193
n
118
ILE
193
A
GLU
194
n
119
GLU
194
A
PHE
195
n
120
PHE
195
A
PHE
196
n
121
PHE
196
A
HIS
197
n
122
HIS
197
A
ILE
198
n
123
ILE
198
A
PHE
199
n
124
PHE
199
A
ASN
200
n
125
ASN
200
A
THR
201
n
126
THR
201
A
LEU
202
n
127
LEU
202
A
TYR
203
n
128
TYR
203
A
LEU
204
n
129
LEU
204
A
LEU
205
n
130
LEU
205
A
GLU
206
n
131
GLU
206
A
LYS
207
n
132
LYS
207
A
GLN
208
n
133
GLN
208
A
ILE
209
n
134
ILE
209
A
ILE
210
n
135
ILE
210
A
LEU
211
n
136
LEU
211
A
ALA
212
n
137
ALA
212
A
SER
213
n
138
SER
213
A
ASP
214
n
139
ASP
214
A
ARG
215
n
140
ARG
215
A
HIS
216
n
141
HIS
216
A
PRO
217
n
142
PRO
217
A
GLN
218
n
143
GLN
218
A
LYS
219
n
144
LYS
219
A
LEU
220
n
145
LEU
220
A
ASP
221
n
146
ASP
221
A
GLY
222
n
147
GLY
222
A
VAL
223
n
148
VAL
223
A
SER
224
n
149
SER
224
A
ASP
225
n
150
ASP
225
A
ARG
226
n
151
ARG
226
A
LEU
227
n
152
LEU
227
A
VAL
228
n
153
VAL
228
A
SER
229
n
154
SER
229
A
ARG
230
n
155
ARG
230
A
PHE
231
n
156
PHE
231
A
GLU
232
n
157
GLU
232
A
GLY
233
n
158
GLY
233
A
GLY
234
n
159
GLY
234
A
ILE
235
n
160
ILE
235
A
LEU
236
n
161
LEU
236
A
VAL
237
n
162
VAL
237
A
GLU
238
n
163
GLU
238
A
ILE
239
n
164
ILE
239
A
GLU
240
n
165
GLU
240
A
LEU
241
n
166
LEU
241
A
ASP
242
n
167
ASP
242
A
ASN
243
n
168
ASN
243
A
LYS
244
n
169
LYS
244
A
THR
245
n
170
THR
245
A
ARG
246
n
171
ARG
246
A
PHE
247
n
172
PHE
247
A
LYS
248
n
173
LYS
248
A
ILE
249
n
174
ILE
249
A
ILE
250
n
175
ILE
250
A
LYS
251
n
176
LYS
251
A
GLU
252
n
177
GLU
252
A
LYS
253
n
178
LYS
253
A
LEU
254
n
179
LEU
254
A
LYS
255
n
180
LYS
255
A
GLU
256
n
181
GLU
256
A
PHE
257
n
182
PHE
257
A
ASN
258
n
183
ASN
258
A
LEU
259
n
184
LEU
259
A
GLU
260
n
185
GLU
260
A
LEU
261
n
186
LEU
261
A
ARG
262
n
187
ARG
262
A
LYS
263
n
188
LYS
263
A
GLU
264
n
189
GLU
264
A
VAL
265
n
190
VAL
265
A
ILE
266
n
191
ILE
266
A
ASP
267
n
192
ASP
267
A
TYR
268
n
193
TYR
268
A
LEU
269
n
194
LEU
269
A
LEU
270
n
195
LEU
270
A
GLU
271
n
196
GLU
271
A
ASN
272
n
197
ASN
272
A
THR
273
n
198
THR
273
A
LYS
274
n
199
LYS
274
A
ASN
275
n
200
ASN
275
A
VAL
276
n
201
VAL
276
A
ARG
277
n
202
ARG
277
A
GLU
278
n
203
GLU
278
A
ILE
279
n
204
ILE
279
A
GLU
280
n
205
GLU
280
A
GLY
281
n
206
GLY
281
A
LYS
282
n
207
LYS
282
A
ILE
283
n
208
ILE
283
A
LYS
284
n
209
LYS
284
A
LEU
285
n
210
LEU
285
A
ILE
286
n
211
ILE
286
A
LYS
287
n
212
LYS
287
A
LEU
288
n
213
LEU
288
A
LYS
289
n
214
LYS
289
A
GLY
290
n
215
GLY
290
A
PHE
291
n
216
PHE
291
A
GLU
292
n
217
GLU
292
A
GLY
293
n
218
GLY
293
A
LEU
294
n
219
LEU
294
A
GLU
295
n
220
GLU
295
A
ARG
296
n
221
ARG
296
A
LYS
297
n
222
LYS
297
A
GLU
298
n
223
GLU
298
A
ARG
299
n
224
ARG
299
A
LYS
300
n
225
LYS
300
A
GLU
301
n
226
GLU
301
A
ARG
302
n
227
ARG
302
A
ASP
303
n
228
ASP
303
A
LYS
304
n
229
LYS
304
A
LEU
305
n
230
LEU
305
A
MSE
306
n
231
MSE
306
A
GLN
307
n
232
GLN
307
A
ILE
308
n
233
ILE
308
A
VAL
309
n
234
VAL
309
A
GLU
310
n
235
GLU
310
A
PHE
311
n
236
PHE
311
A
VAL
312
n
237
VAL
312
A
ALA
313
n
238
ALA
313
A
ASN
314
n
239
ASN
314
A
TYR
315
n
240
TYR
315
A
TYR
316
n
241
TYR
316
A
ALA
317
n
242
ALA
317
A
VAL
318
n
243
VAL
318
A
LYS
319
n
244
LYS
319
A
VAL
320
n
245
VAL
320
A
GLU
321
n
246
GLU
321
A
ASP
322
n
247
ASP
322
A
ILE
323
n
248
ILE
323
A
LEU
324
n
249
LEU
324
A
SER
325
n
250
SER
325
A
ASP
326
n
251
ASP
326
A
LYS
327
n
252
LYS
327
A
ARG
328
n
253
ARG
328
A
ASN
329
n
254
ASN
329
A
LYS
330
n
255
LYS
330
A
ARG
331
n
256
ARG
331
A
THR
332
n
257
THR
332
A
SER
333
n
258
SER
333
A
GLU
334
n
259
GLU
334
A
ALA
335
n
260
ALA
335
A
ARG
336
n
261
ARG
336
A
LYS
337
n
262
LYS
337
A
ILE
338
n
263
ILE
338
A
ALA
339
n
264
ALA
339
A
MSE
340
n
265
MSE
340
A
TYR
341
n
266
TYR
341
A
LEU
342
n
267
LEU
342
A
CYS
343
n
268
CYS
343
A
ARG
344
n
269
ARG
344
A
LYS
345
n
270
LYS
345
A
VAL
346
n
271
VAL
346
A
CYS
347
n
272
CYS
347
A
SER
348
n
273
SER
348
A
ALA
349
n
274
ALA
349
A
SER
350
n
275
SER
350
A
LEU
351
n
276
LEU
351
A
ILE
352
n
277
ILE
352
A
GLU
353
n
278
GLU
353
A
ILE
354
n
279
ILE
354
A
ALA
355
n
280
ALA
355
A
ARG
356
n
281
ARG
356
A
ALA
357
n
282
ALA
357
A
PHE
358
n
283
PHE
358
A
LYS
359
n
284
LYS
359
A
ARG
360
n
285
ARG
360
A
LYS
361
n
286
LYS
361
A
ASP
362
n
287
ASP
362
A
HIS
363
n
288
HIS
363
A
THR
364
n
289
THR
364
A
THR
365
n
290
THR
365
A
VAL
366
n
291
VAL
366
A
ILE
367
n
292
ILE
367
A
HIS
368
n
293
HIS
368
A
ALA
369
n
294
ALA
369
A
ILE
370
n
295
ILE
370
A
ARG
371
n
296
ARG
371
A
SER
372
n
297
SER
372
A
VAL
373
n
298
VAL
373
A
GLU
374
n
299
GLU
374
A
GLU
375
n
300
GLU
375
A
GLU
376
n
301
GLU
376
A
LYS
377
n
302
LYS
377
A
LYS
378
n
303
LYS
378
A
n
304
379
A
n
305
380
A
ARG
381
n
306
ARG
381
A
LYS
382
n
307
LYS
382
A
PHE
383
n
308
PHE
383
A
LYS
384
n
309
LYS
384
A
HIS
385
n
310
HIS
385
A
LEU
386
n
311
LEU
386
A
VAL
387
n
312
VAL
387
A
GLY
388
n
313
GLY
388
A
PHE
389
n
314
PHE
389
A
LEU
390
n
315
LEU
390
A
GLU
391
n
316
GLU
391
A
LYS
392
n
317
LYS
392
A
GLN
393
n
318
GLN
393
A
ALA
394
n
319
ALA
394
A
PHE
395
n
320
PHE
395
A
ASP
396
n
321
ASP
396
A
LYS
397
n
322
LYS
397
A
ILE
398
n
323
ILE
398
A
CYS
399
n
324
CYS
399
A
1.7356
-0.9797
-1.4399
2.6233
2.4385
4.3345
-0.1206
-0.0230
-0.1632
-0.0006
0.0283
-0.1449
0.0823
0.2414
0.0923
0.2475
-0.0120
0.1055
0.2375
0.0427
0.3080
refined
38.6076
65.4598
18.5388
X-RAY DIFFRACTION
3.7046
1.4827
-1.8795
4.8248
-1.6048
3.8853
0.2034
-0.2433
-0.1394
0.4236
-0.2179
0.1419
0.0547
0.0634
0.0145
0.2978
-0.1387
0.0064
0.2711
-0.0093
0.2997
refined
44.7589
95.8764
19.9505
X-RAY DIFFRACTION
11.4781
-0.0561
4.8865
4.3363
1.6590
10.4666
0.7333
-1.7095
-0.8954
-0.0199
-0.4084
0.8794
0.1063
-2.4509
-0.3250
0.0151
-0.0389
-0.0714
0.6517
0.0654
0.3616
refined
21.1668
102.0162
4.3628
X-RAY DIFFRACTION
-5.6979
-1.7482
-12.9295
6.0314
4.0968
-22.0208
0.0877
-0.1075
0.7053
-0.8423
-0.1123
-0.0995
-0.6193
-0.3820
0.0246
0.3805
-0.1289
0.1272
0.1971
-0.0027
0.5357
refined
42.3692
81.0161
19.7564
X-RAY DIFFRACTION
0.7774
0.2825
-0.4036
2.1808
-0.3494
0.8945
-0.0218
-0.1646
-0.1214
0.0439
0.0035
-0.2975
-0.0982
0.0836
0.0183
0.2247
-0.0065
0.0840
0.2808
-0.0107
0.2113
refined
39.0803
80.8069
15.8232
X-RAY DIFFRACTION
A
77
A
2
A
242
A
167
X-RAY DIFFRACTION
1
A
243
A
168
A
293
A
218
X-RAY DIFFRACTION
2
A
294
A
219
A
399
A
324
X-RAY DIFFRACTION
3
A
401
B
1
A
401
B
1
X-RAY DIFFRACTION
4
A
400
C
1
A
400
C
1
X-RAY DIFFRACTION
4
A
1
D
1
A
47
D
47
X-RAY DIFFRACTION
5
author_defined_assembly
1
monomeric
A
ADP
400
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
45
D
O
HOH
1_555
175.2
A
ADP
400
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
31
D
O
HOH
1_555
98.4
A
HOH
45
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
31
D
O
HOH
1_555
77.6
A
ADP
400
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
38
D
O
HOH
1_555
95.5
A
HOH
45
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
38
D
O
HOH
1_555
86.6
A
HOH
31
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
38
D
O
HOH
1_555
81.7
A
ADP
400
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
9
D
O
HOH
1_555
102.9
A
HOH
45
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
9
D
O
HOH
1_555
74.2
A
HOH
31
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
9
D
O
HOH
1_555
82.8
A
HOH
38
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
HOH
9
D
O
HOH
1_555
157.5
A
ADP
400
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
A
THR
126
A
OG1
THR
51
1_555
98.3
A
HOH
45
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
THR
126
A
OG1
THR
51
1_555
85.3
A
HOH
31
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
THR
126
A
OG1
THR
51
1_555
161.7
A
HOH
38
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
THR
126
A
OG1
THR
51
1_555
104.1
A
HOH
9
D
O
HOH
1_555
A
MG
401
B
MG
MG
1_555
A
THR
126
A
OG1
THR
51
1_555
86.2
A
MSE
155
SELENOMETHIONINE
A
MSE
80
MET
A
MSE
170
SELENOMETHIONINE
A
MSE
95
MET
A
MSE
306
SELENOMETHIONINE
A
MSE
231
MET
A
MSE
340
SELENOMETHIONINE
A
MSE
265
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
144
A
N
ILE
69
A
O
LEU
178
A
O
LEU
103
A
N
LEU
177
A
N
LEU
102
A
O
ILE
210
A
O
ILE
135
A
O
LEU
211
A
O
LEU
136
A
N
ILE
115
A
N
ILE
40
A
N
PHE
116
A
N
PHE
41
A
O
ILE
235
A
O
ILE
160
1
A
LYS
76
A
LYS
1
1
Y
1
A
LYS
379
A
LYS
304
1
Y
1
A
ASP
380
A
ASP
305
1
Y
1
A
PHE
78
81.63
24.63
1
A
ASN
107
-143.29
49.90
1
A
LEU
108
-33.49
125.90
1
A
ASN
113
-161.88
114.42
1
A
ALA
313
-58.34
-78.92
1
A
ALA
317
75.17
49.64
1
A
ILE
323
-47.77
-15.69
1
A
LEU
324
-106.60
69.90
1
A
ASP
326
-82.97
33.85
1
A
LYS
330
54.79
-9.80
1
A
LYS
359
-42.97
104.53
1
A
ASP
362
-179.46
-178.27
1
A
HIS
363
-95.07
-90.95
1
A
THR
364
-2.77
-89.86
1
A
THR
365
-8.42
-77.80
1
A
LYS
382
-123.84
-85.99
1
A
LEU
386
-62.98
-71.30
41.996
0.926
0.917
0.2548400
0.2286300
0.2308300
0.2308300
2.700
19.780
1458
15895
15831
8.4
99.6
10.034
0.213
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0.000
MAD
0.471
0.294
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.700
19.780
47
2713
28
0
2638
0.011
0.022
2705
1.165
1.985
3621
3.467
3.000
319
20.039
15.00
557
0.094
0.200
403
0.004
0.020
1961
0.278
0.300
1295
0.164
0.500
179
0.259
0.300
41
0.403
0.500
5
0.583
1.5
1589
1.173
2.0
2559
1.847
3.0
1116
3.188
4.5
1062
0.3320000
0.3040000
2.769
105
1134
1134
20
98.9
69.3
2.700
30.000
1L8Q
17436
17366
0.0
0.0
0.0580000
1
15.5
5
99.6
2.700
2.800
5.10
1720
0.3300000
1
5.00
100.00
data reduction
DENZO
data scaling
SCALEPACK
phasing
SHARP
refinement
REFMAC
5.0
Chromosomal replication initiator protein dnaA
CRYSTAL STRUCTURE OF DNA REPLICATION INITIATION FACTOR
1
N
N
2
N
N
3
N
N
4
N
N
A
ASN
94
A
ASN
19
HELX_P
A
ASN
107
A
ASN
32
1
1
14
A
GLY
124
A
GLY
49
HELX_P
A
ARG
139
A
ARG
64
1
2
16
A
ALA
148
A
ALA
73
HELX_P
A
GLY
162
A
GLY
87
1
3
15
A
THR
163
A
THR
88
HELX_P
A
SER
173
A
SER
98
1
4
11
A
ASP
181
A
ASP
106
HELX_P
A
SER
186
A
SER
111
5
5
6
A
LYS
188
A
LYS
113
HELX_P
A
LEU
205
A
LEU
130
1
6
18
A
HIS
216
A
HIS
141
HELX_P
A
LEU
220
A
LEU
145
5
7
5
A
SER
224
A
SER
149
HELX_P
A
GLY
233
A
GLY
158
1
8
10
A
ASP
242
A
ASP
167
HELX_P
A
PHE
257
A
PHE
182
1
9
16
A
ARG
262
A
ARG
187
HELX_P
A
THR
273
A
THR
198
1
10
12
A
ASN
275
A
ASN
200
HELX_P
A
GLY
290
A
GLY
215
1
11
16
A
GLY
290
A
GLY
215
HELX_P
A
ALA
317
A
ALA
242
1
12
28
A
LYS
319
A
LYS
244
HELX_P
A
LEU
324
A
LEU
249
1
13
6
A
THR
332
A
THR
257
HELX_P
A
SER
348
A
SER
273
1
14
17
A
SER
350
A
SER
275
HELX_P
A
PHE
358
A
PHE
283
1
15
9
A
THR
364
A
THR
289
HELX_P
A
GLU
376
A
GLU
301
1
16
13
A
LYS
382
A
LYS
307
HELX_P
A
CYS
399
A
CYS
324
1
17
18
covale
1.342
A
ALA
154
A
C
ALA
79
1_555
A
MSE
155
A
N
MSE
80
1_555
covale
1.325
A
MSE
155
A
C
MSE
80
1_555
A
VAL
156
A
N
VAL
81
1_555
covale
1.325
A
ASN
169
A
C
ASN
94
1_555
A
MSE
170
A
N
MSE
95
1_555
covale
1.327
A
MSE
170
A
C
MSE
95
1_555
A
TYR
171
A
N
TYR
96
1_555
covale
1.319
A
LEU
305
A
C
LEU
230
1_555
A
MSE
306
A
N
MSE
231
1_555
covale
1.330
A
MSE
306
A
C
MSE
231
1_555
A
GLN
307
A
N
GLN
232
1_555
covale
1.326
A
ALA
339
A
C
ALA
264
1_555
A
MSE
340
A
N
MSE
265
1_555
covale
1.332
A
MSE
340
A
C
MSE
265
1_555
A
TYR
341
A
N
TYR
266
1_555
metalc
1.853
A
ADP
400
C
O1B
ADP
1_555
A
MG
401
B
MG
MG
1_555
metalc
2.098
A
MG
401
B
MG
MG
1_555
A
HOH
45
D
O
HOH
1_555
metalc
2.173
A
MG
401
B
MG
MG
1_555
A
HOH
31
D
O
HOH
1_555
metalc
1.818
A
MG
401
B
MG
MG
1_555
A
HOH
38
D
O
HOH
1_555
metalc
2.174
A
MG
401
B
MG
MG
1_555
A
HOH
9
D
O
HOH
1_555
metalc
1.944
A
MG
401
B
MG
MG
1_555
A
THR
126
A
OG1
THR
51
1_555
DNA BINDING PROTEIN
AAA+, HELIX-TURN-HELIX, NUCLEOTIDE-BINDING, DNA BINDING, REPLICATION INITIATION, DNA BINDING PROTEIN
A
ASN
113
A
ASN
38
1
A
PRO
114
A
PRO
39
0.22
DNAA_AQUAE
UNP
1
76
O66659
KDFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAM
VEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGI
LVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANY
YAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKKDRKFKHLVGFLEKQAF
DKIC
76
399
1L8Q
76
399
O66659
A
1
1
324
1
MET
MODIFIED RESIDUE
MSE
155
1L8Q
A
O66659
UNP
155
80
1
MET
MODIFIED RESIDUE
MSE
170
1L8Q
A
O66659
UNP
170
95
1
MET
MODIFIED RESIDUE
MSE
306
1L8Q
A
O66659
UNP
306
231
1
MET
MODIFIED RESIDUE
MSE
340
1L8Q
A
O66659
UNP
340
265
5
parallel
parallel
parallel
parallel
A
VAL
143
A
VAL
68
A
SER
147
A
SER
72
A
LEU
176
A
LEU
101
A
ASP
180
A
ASP
105
A
GLN
208
A
GLN
133
A
SER
213
A
SER
138
A
ILE
115
A
ILE
40
A
TYR
118
A
TYR
43
A
ILE
235
A
ILE
160
A
GLU
238
A
GLU
163
BINDING SITE FOR RESIDUE MG A 401
Software
6
BINDING SITE FOR RESIDUE ADP A 400
Software
18
A
HOH
9
D
HOH
6
1_555
A
HOH
31
D
HOH
6
1_555
A
HOH
38
D
HOH
6
1_555
A
HOH
45
D
HOH
6
1_555
A
THR
126
A
THR
51
6
1_555
A
ADP
400
C
ADP
6
1_555
A
HOH
20
D
HOH
18
1_555
A
HOH
22
D
HOH
18
1_555
A
HOH
31
D
HOH
18
1_555
A
HOH
38
D
HOH
18
1_555
A
HOH
39
D
HOH
18
1_555
A
ASN
87
A
ASN
12
18
1_555
A
PHE
88
A
PHE
13
18
1_555
A
ILE
89
A
ILE
14
18
1_555
A
ASN
94
A
ASN
19
18
1_555
A
GLY
122
A
GLY
47
18
1_555
A
THR
123
A
THR
48
18
1_555
A
GLY
124
A
GLY
49
18
1_555
A
LYS
125
A
LYS
50
18
1_555
A
THR
126
A
THR
51
18
1_555
A
HIS
127
A
HIS
52
18
1_555
A
ILE
249
A
ILE
174
18
1_555
A
VAL
276
A
VAL
201
18
1_555
A
MG
401
B
MG
18
1_555
197
I 2 3