1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Biron, Z.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
41
12687
12696
10.1021/bi026261y
12379111
A Monomeric 3(10)-Helix Is Formed in Water by a 13-Residue Peptide
Representing the Neutralizing Determinant of HIV-1 on gp41(,).
2002
10.2210/pdb1lb0/pdb
pdb_00001lb0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
1617.820
GP41
Residues 659-671
1
syn
polymer
Transmembrane glycoprotein
no
no
ELLELDKWASLWN
ELLELDKWASLWN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-12-04
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
RCSB
Y
RCSB
2002-04-01
REL
REL
The peptide was chemically synthesized. The sequence of the peptide is naturally found in HIV-1 virus.
sample
This structure was determined using standard 2D homonuclear techniques.
1
NOESY
DQF-COSY
TOCSY
0.1mM
7.7
1
atm
277
K
The structures are based on a total of 212 restraints, 202 are NOE-derived
distance constraints, 9 dihedral angle restraints,1 distance restraint
from hydrogen bonds.
Distance geometry
simulated annealing
3.5mM gp41659-671; 50mM 50mM ammonium acetate buffer.
95% H2O/5% D2O
5 mM gp41659-671; 50mM 50mM ammonium acetate buffer
95% H2O/5% D2O
Bruker
data analysis
AURELIA
amix 2.8.11
Bruker
processing
XwinNMR
3.0
A.T.Brunger
structure solution
CNS
1.1
A.T.Brunger
refinement
CNS
800
Bruker
DRX
500
Bruker
DMX
GLU
1
n
1
GLU
1
A
LEU
2
n
2
LEU
2
A
LEU
3
n
3
LEU
3
A
GLU
4
n
4
GLU
4
A
LEU
5
n
5
LEU
5
A
ASP
6
n
6
ASP
6
A
LYS
7
n
7
LYS
7
A
TRP
8
n
8
TRP
8
A
ALA
9
n
9
ALA
9
A
SER
10
n
10
SER
10
A
LEU
11
n
11
LEU
11
A
TRP
12
n
12
TRP
12
A
ASN
13
n
13
ASN
13
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
NMR Structure of HIV-1 gp41 659-671 13-mer peptide
1
N
N
A
LEU
3
A
LEU
3
HELX_P
A
ASN
13
A
ASN
13
5
1
11
VIRAL PROTEIN
3-10 helix, gp41 envelope protein, Viral protein
ENV_HV1W1
UNP
1
659
P31872
ELLELDKWASLWN
659
671
1LB0
1
13
P31872
A
1
1
13