0.012674
0.000000
0.000000
0.000000
0.012674
0.000000
0.000000
0.000000
0.011223
0.00000
0.00000
0.00000
RESIDUE PRO 86 IS A CIS PROLINE.
PEPTIDE BONDS ALA 88 - ASP 89 AND VAL 221 - GLY 222 ARE CIS PEPTIDE BONDS AND ARE INVOLVED IN CARBOHYDRATE BINDING SITE.
WATERS 403 AND 404 OCCUPY SPECIAL POSITIONS AND ARE SHARED BY TWO SYMMETRY RELATED MOLECULES.
Delbaere, L.
Vandonselaar, M.
Quail, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
78.900
78.900
89.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C6 H12 O5
164.156
alpha-L-fucopyranose
L-saccharide, alpha linking
C6 H12 O6
180.156
beta-D-galactopyranose
D-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H17 N O6
235.234
n
methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
D-saccharide
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C5 H7 N O3
129.114
n
PYROGLUTAMIC ACID
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
230
950
965
10.1006/jmbi.1993.1212
8478943
Structures of the lectin IV of Griffonia simplicifolia and its complex with the Lewis b human blood group determinant at 2.0 A resolution.
1993
CA
Can.J.Chem.
CJCHAG
0015
0008-4042
68
1116
Molecular Recognition of a Human Blood Group Determinant by a Plant Lectin
1990
US
Trans.Am.Crystallogr.Assoc.
TACAAH
0285
0065-8006
25
65
Structures of Griffonia Simplicifolia Lectin Iv and its Complex with a Synthetic Lewis B Blood Group Determinant
1991
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
26816.678
WEST-CENTRAL AFRICAN LEGUME LECTIN IV
1
man
polymer
689.656
alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
1
man
branched
570.542
alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
54.938
MANGANESE (II) ION
1
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
144
nat
water
no
yes
(PCA)NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSF
TFLLKNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSV
ATTRWENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFS
TLDGTNK
QNTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL
KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR
WENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFSTLDG
TNK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
3850
Griffonia simplicifolia
2.58
52.41
pdbx_database_status
struct_conf
struct_conf_type
chem_comp
entity_poly
pdbx_struct_mod_residue
struct_conn
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_struct_special_symmetry
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Derived calculations
Other
Data collection
Derived calculations
Polymer sequence
Atomic model
Data collection
Derived calculations
Structure summary
1
0
1994-01-31
1
1
2008-03-03
1
2
2011-07-13
1
3
2017-11-29
2
0
2019-12-25
3
0
2020-07-29
_pdbx_database_status.process_site
_chem_comp.type
_entity_poly.pdbx_seq_one_letter_code_can
_pdbx_struct_mod_residue.parent_comp_id
_struct_conn.pdbx_leaving_atom_flag
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_pdbx_struct_special_symmetry.label_asym_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
NAG
255
n
B
MAG
1
GAL
253
n
B
GAL
2
FUC
252
n
B
FUC
3
FUC
254
n
B
FUC
4
NAG
257
n
C
NAG
1
FUC
262
n
C
FUC
2
NAG
256
n
C
NAG
3
LFucpa
a-L-fucopyranose
a-L-Fucp
Fuc
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
DGlcpNAc[1Me]b
1-methyl-N-acetyl-b-D-glucopyranose
a-methyl-N-acetyl-D-glucosamine
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Y
BNL
1992-12-17
REL
REL
oligosaccharide
oligosaccharide
LFucpa1-2DGalpb1-3[LFucpa1-4]DGlcpNAc[1Me]b1-OME
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,4,3/[a2122h-1b_1-5_1*OC_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3-3/a3-b1_a4-d1_b2-c1
2
PDB2Glycan
1.1.0
WURCS
[][methyl]{[(1+1)][b-D-GlcpNAc]{[(3+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}[(4+1)][a-L-Fucp]{}}}
2
PDB-CARE
LINUCS
LFucpa1-3[DGlcpNAcb1-4]DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-1/a3-b1_a4-c1
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{}}}
3
PDB-CARE
LINUCS
C1
O3
GAL
MAG
2
1
2
O1
HO3
sing
C1
O2
FUC
GAL
3
2
2
O1
HO2
sing
C1
O4
FUC
MAG
4
1
2
O1
HO4
sing
C1
O3
FUC
NAG
2
1
3
O1
HO3
sing
C1
O4
NAG
NAG
3
1
3
O1
HO4
sing
n
n
n
n
n
n
n
MN
MANGANESE (II) ION
CA
CALCIUM ION
SO4
SULFATE ION
HOH
water
MN
250
4
MN
MN
250
A
CA
251
5
CA
CA
251
A
SO4
500
6
SO4
SO4
500
A
HOH
301
7
HOH
HOH
301
A
HOH
302
7
HOH
HOH
302
A
HOH
303
7
HOH
HOH
303
A
HOH
304
7
HOH
HOH
304
A
HOH
305
7
HOH
HOH
305
A
HOH
306
7
HOH
HOH
306
A
HOH
307
7
HOH
HOH
307
A
HOH
308
7
HOH
HOH
308
A
HOH
309
7
HOH
HOH
309
A
HOH
310
7
HOH
HOH
310
A
HOH
311
7
HOH
HOH
311
A
HOH
312
7
HOH
HOH
312
A
HOH
313
7
HOH
HOH
313
A
HOH
314
7
HOH
HOH
314
A
HOH
315
7
HOH
HOH
315
A
HOH
316
7
HOH
HOH
316
A
HOH
317
7
HOH
HOH
317
A
HOH
318
7
HOH
HOH
318
A
HOH
319
7
HOH
HOH
319
A
HOH
320
7
HOH
HOH
320
A
HOH
321
7
HOH
HOH
321
A
HOH
322
7
HOH
HOH
322
A
HOH
323
7
HOH
HOH
323
A
HOH
324
7
HOH
HOH
324
A
HOH
325
7
HOH
HOH
325
A
HOH
326
7
HOH
HOH
326
A
HOH
327
7
HOH
HOH
327
A
HOH
328
7
HOH
HOH
328
A
HOH
329
7
HOH
HOH
329
A
HOH
330
7
HOH
HOH
330
A
HOH
331
7
HOH
HOH
331
A
HOH
332
7
HOH
HOH
332
A
HOH
333
7
HOH
HOH
333
A
HOH
334
7
HOH
HOH
334
A
HOH
335
7
HOH
HOH
335
A
HOH
336
7
HOH
HOH
336
A
HOH
337
7
HOH
HOH
337
A
HOH
338
7
HOH
HOH
338
A
HOH
339
7
HOH
HOH
339
A
HOH
340
7
HOH
HOH
340
A
HOH
341
7
HOH
HOH
341
A
HOH
342
7
HOH
HOH
342
A
HOH
343
7
HOH
HOH
343
A
HOH
344
7
HOH
HOH
344
A
HOH
345
7
HOH
HOH
345
A
HOH
346
7
HOH
HOH
346
A
HOH
347
7
HOH
HOH
347
A
HOH
348
7
HOH
HOH
348
A
HOH
349
7
HOH
HOH
349
A
HOH
350
7
HOH
HOH
350
A
HOH
351
7
HOH
HOH
351
A
HOH
352
7
HOH
HOH
352
A
HOH
353
7
HOH
HOH
353
A
HOH
354
7
HOH
HOH
354
A
HOH
355
7
HOH
HOH
355
A
HOH
356
7
HOH
HOH
356
A
HOH
357
7
HOH
HOH
357
A
HOH
358
7
HOH
HOH
358
A
HOH
359
7
HOH
HOH
359
A
HOH
360
7
HOH
HOH
360
A
HOH
361
7
HOH
HOH
361
A
HOH
362
7
HOH
HOH
362
A
HOH
363
7
HOH
HOH
363
A
HOH
364
7
HOH
HOH
364
A
HOH
365
7
HOH
HOH
365
A
HOH
366
7
HOH
HOH
366
A
HOH
367
7
HOH
HOH
367
A
HOH
368
7
HOH
HOH
368
A
HOH
369
7
HOH
HOH
369
A
HOH
370
7
HOH
HOH
370
A
HOH
371
7
HOH
HOH
371
A
HOH
372
7
HOH
HOH
372
A
HOH
373
7
HOH
HOH
373
A
HOH
374
7
HOH
HOH
374
A
HOH
375
7
HOH
HOH
375
A
HOH
376
7
HOH
HOH
376
A
HOH
377
7
HOH
HOH
377
A
HOH
378
7
HOH
HOH
378
A
HOH
379
7
HOH
HOH
379
A
HOH
380
7
HOH
HOH
380
A
HOH
381
7
HOH
HOH
381
A
HOH
382
7
HOH
HOH
382
A
HOH
383
7
HOH
HOH
383
A
HOH
384
7
HOH
HOH
384
A
HOH
385
7
HOH
HOH
385
A
HOH
386
7
HOH
HOH
386
A
HOH
387
7
HOH
HOH
387
A
HOH
388
7
HOH
HOH
388
A
HOH
389
7
HOH
HOH
389
A
HOH
390
7
HOH
HOH
390
A
HOH
391
7
HOH
HOH
391
A
HOH
392
7
HOH
HOH
392
A
HOH
393
7
HOH
HOH
393
A
HOH
394
7
HOH
HOH
394
A
HOH
395
7
HOH
HOH
395
A
HOH
396
7
HOH
HOH
396
A
HOH
397
7
HOH
HOH
397
A
HOH
398
7
HOH
HOH
398
A
HOH
399
7
HOH
HOH
399
A
HOH
400
7
HOH
HOH
400
A
HOH
401
7
HOH
HOH
401
A
HOH
402
7
HOH
HOH
402
A
HOH
403
7
HOH
HOH
403
A
HOH
404
7
HOH
HOH
404
A
HOH
405
7
HOH
HOH
405
A
HOH
406
7
HOH
HOH
406
A
HOH
407
7
HOH
HOH
407
A
HOH
408
7
HOH
HOH
408
A
HOH
409
7
HOH
HOH
409
A
HOH
410
7
HOH
HOH
410
A
HOH
411
7
HOH
HOH
411
A
HOH
412
7
HOH
HOH
412
A
HOH
413
7
HOH
HOH
413
A
HOH
414
7
HOH
HOH
414
A
HOH
415
7
HOH
HOH
415
A
HOH
416
7
HOH
HOH
416
A
HOH
417
7
HOH
HOH
417
A
HOH
418
7
HOH
HOH
418
A
HOH
419
7
HOH
HOH
419
A
HOH
420
7
HOH
HOH
420
A
HOH
421
7
HOH
HOH
421
A
HOH
422
7
HOH
HOH
422
A
HOH
423
7
HOH
HOH
423
A
HOH
424
7
HOH
HOH
424
A
HOH
425
7
HOH
HOH
425
A
HOH
426
7
HOH
HOH
426
A
HOH
427
7
HOH
HOH
427
A
HOH
428
7
HOH
HOH
428
A
HOH
429
7
HOH
HOH
429
A
HOH
430
7
HOH
HOH
430
A
HOH
431
7
HOH
HOH
431
A
HOH
432
7
HOH
HOH
432
A
HOH
433
7
HOH
HOH
433
A
HOH
434
7
HOH
HOH
434
A
HOH
435
7
HOH
HOH
435
A
HOH
450
7
HOH
HOH
450
A
HOH
451
7
HOH
HOH
451
A
HOH
452
7
HOH
HOH
452
A
HOH
453
7
HOH
HOH
453
A
HOH
454
7
HOH
HOH
454
A
HOH
455
7
HOH
HOH
455
A
HOH
456
7
HOH
HOH
456
A
HOH
457
7
HOH
HOH
457
A
HOH
458
7
HOH
HOH
458
A
PCA
1
n
1
PCA
1
A
ASN
2
n
2
ASN
2
A
THR
3
n
3
THR
3
A
VAL
4
n
4
VAL
4
A
ASN
5
n
5
ASN
5
A
PHE
6
n
6
PHE
6
A
THR
7
n
7
THR
7
A
TYR
8
n
8
TYR
8
A
PRO
9
n
9
PRO
9
A
ASP
10
n
10
ASP
10
A
PHE
11
n
11
PHE
11
A
TRP
12
n
12
TRP
12
A
SER
13
n
13
SER
13
A
TYR
14
n
14
TYR
14
A
SER
15
n
15
SER
15
A
LEU
16
n
16
LEU
16
A
LYS
17
n
17
LYS
17
A
ASN
18
n
18
ASN
18
A
GLY
19
n
19
GLY
19
A
THR
20
n
20
THR
20
A
GLU
21
n
21
GLU
21
A
ILE
22
n
22
ILE
22
A
THR
23
n
23
THR
23
A
PHE
24
n
24
PHE
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASP
27
n
27
ASP
27
A
ALA
28
n
28
ALA
28
A
THR
29
n
29
THR
29
A
ARG
30
n
30
ARG
30
A
ILE
31
n
31
ILE
31
A
PRO
32
n
32
PRO
32
A
GLY
33
n
33
GLY
33
A
ALA
34
n
34
ALA
34
A
LEU
35
n
35
LEU
35
A
GLN
36
n
36
GLN
36
A
LEU
37
n
37
LEU
37
A
THR
38
n
38
THR
38
A
LYS
39
n
39
LYS
39
A
THR
40
n
40
THR
40
A
ASP
41
n
41
ASP
41
A
ALA
42
n
42
ALA
42
A
ASN
43
n
43
ASN
43
A
GLY
44
n
44
GLY
44
A
ASN
45
n
45
ASN
45
A
PRO
46
n
46
PRO
46
A
VAL
47
n
47
VAL
47
A
ARG
48
n
48
ARG
48
A
SER
49
n
49
SER
49
A
SER
50
n
50
SER
50
A
ALA
51
n
51
ALA
51
A
GLY
52
n
52
GLY
52
A
GLN
53
n
53
GLN
53
A
ALA
54
n
54
ALA
54
A
SER
55
n
55
SER
55
A
TYR
56
n
56
TYR
56
A
SER
57
n
57
SER
57
A
GLU
58
n
58
GLU
58
A
PRO
59
n
59
PRO
59
A
VAL
60
n
60
VAL
60
A
PHE
61
n
61
PHE
61
A
LEU
62
n
62
LEU
62
A
TRP
63
n
63
TRP
63
A
ASP
64
n
64
ASP
64
A
SER
65
n
65
SER
65
A
THR
66
n
66
THR
66
A
GLY
67
n
67
GLY
67
A
LYS
68
n
68
LYS
68
A
ALA
69
n
69
ALA
69
A
ALA
70
n
70
ALA
70
A
SER
71
n
71
SER
71
A
PHE
72
n
72
PHE
72
A
TYR
73
n
73
TYR
73
A
THR
74
n
74
THR
74
A
SER
75
n
75
SER
75
A
PHE
76
n
76
PHE
76
A
THR
77
n
77
THR
77
A
PHE
78
n
78
PHE
78
A
LEU
79
n
79
LEU
79
A
LEU
80
n
80
LEU
80
A
LYS
81
n
81
LYS
81
A
ASN
82
n
82
ASN
82
A
TYR
83
n
83
TYR
83
A
GLY
84
n
84
GLY
84
A
ALA
85
n
85
ALA
85
A
PRO
86
n
86
PRO
86
A
THR
87
n
87
THR
87
A
ALA
88
n
88
ALA
88
A
ASP
89
n
89
ASP
89
A
GLY
90
n
90
GLY
90
A
LEU
91
n
91
LEU
91
A
ALA
92
n
92
ALA
92
A
PHE
93
n
93
PHE
93
A
PHE
94
n
94
PHE
94
A
LEU
95
n
95
LEU
95
A
ALA
96
n
96
ALA
96
A
PRO
97
n
97
PRO
97
A
VAL
98
n
98
VAL
98
A
ASP
99
n
99
ASP
99
A
SER
100
n
100
SER
100
A
SER
101
n
101
SER
101
A
VAL
102
n
102
VAL
102
A
LYS
103
n
103
LYS
103
A
ASP
104
n
104
ASP
104
A
TYR
105
n
105
TYR
105
A
GLY
106
n
106
GLY
106
A
GLY
107
n
107
GLY
107
A
PHE
108
n
108
PHE
108
A
LEU
109
n
109
LEU
109
A
GLY
110
n
110
GLY
110
A
LEU
111
n
111
LEU
111
A
PHE
112
n
112
PHE
112
A
ARG
113
n
113
ARG
113
A
HIS
114
n
114
HIS
114
A
GLU
115
n
115
GLU
115
A
THR
116
n
116
THR
116
A
ALA
117
n
117
ALA
117
A
ALA
118
n
118
ALA
118
A
ASP
119
n
119
ASP
119
A
PRO
120
n
120
PRO
120
A
SER
121
n
121
SER
121
A
LYS
122
n
122
LYS
122
A
ASN
123
n
123
ASN
123
A
GLN
124
n
124
GLN
124
A
VAL
125
n
125
VAL
125
A
VAL
126
n
126
VAL
126
A
ALA
127
n
127
ALA
127
A
VAL
128
n
128
VAL
128
A
GLU
129
n
129
GLU
129
A
PHE
130
n
130
PHE
130
A
ASP
131
n
131
ASP
131
A
THR
132
n
132
THR
132
A
TRP
133
n
133
TRP
133
A
ILE
134
n
134
ILE
134
A
ASN
135
n
135
ASN
135
A
LYS
136
n
136
LYS
136
A
ASP
137
n
137
ASP
137
A
TRP
138
n
138
TRP
138
A
ASN
139
n
139
ASN
139
A
ASP
140
n
140
ASP
140
A
PRO
141
n
141
PRO
141
A
PRO
142
n
142
PRO
142
A
TYR
143
n
143
TYR
143
A
PRO
144
n
144
PRO
144
A
HIS
145
n
145
HIS
145
A
ILE
146
n
146
ILE
146
A
GLY
147
n
147
GLY
147
A
ILE
148
n
148
ILE
148
A
ASP
149
n
149
ASP
149
A
VAL
150
n
150
VAL
150
A
ASN
151
n
151
ASN
151
A
SER
152
n
152
SER
152
A
ILE
153
n
153
ILE
153
A
VAL
154
n
154
VAL
154
A
SER
155
n
155
SER
155
A
VAL
156
n
156
VAL
156
A
ALA
157
n
157
ALA
157
A
THR
158
n
158
THR
158
A
THR
159
n
159
THR
159
A
ARG
160
n
160
ARG
160
A
TRP
161
n
161
TRP
161
A
GLU
162
n
162
GLU
162
A
ASN
163
n
163
ASN
163
A
ASP
164
n
164
ASP
164
A
ASP
165
n
165
ASP
165
A
ALA
166
n
166
ALA
166
A
TYR
167
n
167
TYR
167
A
GLY
168
n
168
GLY
168
A
SER
169
n
169
SER
169
A
SER
170
n
170
SER
170
A
ILE
171
n
171
ILE
171
A
ALA
172
n
172
ALA
172
A
THR
173
n
173
THR
173
A
ALA
174
n
174
ALA
174
A
HIS
175
n
175
HIS
175
A
ILE
176
n
176
ILE
176
A
THR
177
n
177
THR
177
A
TYR
178
n
178
TYR
178
A
ASP
179
n
179
ASP
179
A
ALA
180
n
180
ALA
180
A
ARG
181
n
181
ARG
181
A
SER
182
n
182
SER
182
A
LYS
183
n
183
LYS
183
A
ILE
184
n
184
ILE
184
A
LEU
185
n
185
LEU
185
A
THR
186
n
186
THR
186
A
VAL
187
n
187
VAL
187
A
LEU
188
n
188
LEU
188
A
LEU
189
n
189
LEU
189
A
SER
190
n
190
SER
190
A
TYR
191
n
191
TYR
191
A
GLU
192
n
192
GLU
192
A
HIS
193
n
193
HIS
193
A
GLY
194
n
194
GLY
194
A
ARG
195
n
195
ARG
195
A
ASP
196
n
196
ASP
196
A
TYR
197
n
197
TYR
197
A
ILE
198
n
198
ILE
198
A
LEU
199
n
199
LEU
199
A
SER
200
n
200
SER
200
A
HIS
201
n
201
HIS
201
A
VAL
202
n
202
VAL
202
A
VAL
203
n
203
VAL
203
A
ASP
204
n
204
ASP
204
A
LEU
205
n
205
LEU
205
A
ALA
206
n
206
ALA
206
A
LYS
207
n
207
LYS
207
A
VAL
208
n
208
VAL
208
A
LEU
209
n
209
LEU
209
A
PRO
210
n
210
PRO
210
A
GLN
211
n
211
GLN
211
A
LYS
212
n
212
LYS
212
A
VAL
213
n
213
VAL
213
A
ARG
214
n
214
ARG
214
A
ILE
215
n
215
ILE
215
A
GLY
216
n
216
GLY
216
A
PHE
217
n
217
PHE
217
A
SER
218
n
218
SER
218
A
ALA
219
n
219
ALA
219
A
GLY
220
n
220
GLY
220
A
VAL
221
n
221
VAL
221
A
GLY
222
n
222
GLY
222
A
TYR
223
n
223
TYR
223
A
ASP
224
n
224
ASP
224
A
GLU
225
n
225
GLU
225
A
VAL
226
n
226
VAL
226
A
THR
227
n
227
THR
227
A
TYR
228
n
228
TYR
228
A
ILE
229
n
229
ILE
229
A
LEU
230
n
230
LEU
230
A
SER
231
n
231
SER
231
A
TRP
232
n
232
TRP
232
A
HIS
233
n
233
HIS
233
A
PHE
234
n
234
PHE
234
A
PHE
235
n
235
PHE
235
A
SER
236
n
236
SER
236
A
THR
237
n
237
THR
237
A
LEU
238
n
238
LEU
238
A
ASP
239
n
239
ASP
239
A
GLY
240
n
240
GLY
240
A
THR
241
n
241
THR
241
A
ASN
242
n
242
ASN
242
A
LYS
243
n
243
LYS
243
A
author_defined_assembly
2
dimeric
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
ASP
131
A
OD2
ASP
131
1_555
93.8
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
ASP
140
A
OD1
ASP
140
1_555
169.9
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
ASP
140
A
OD1
ASP
140
1_555
94.3
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
HIS
145
A
NE2
HIS
145
1_555
95.8
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
HIS
145
A
NE2
HIS
145
1_555
83.0
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
A
HIS
145
A
NE2
HIS
145
1_555
91.2
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
G
O
HOH
1_555
87.8
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
G
O
HOH
1_555
177.6
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
G
O
HOH
1_555
84.2
A
HIS
145
A
NE2
HIS
145
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
G
O
HOH
1_555
95.1
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
G
O
HOH
1_555
88.3
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
G
O
HOH
1_555
94.7
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
G
O
HOH
1_555
85.1
A
HIS
145
A
NE2
HIS
145
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
G
O
HOH
1_555
175.5
A
HOH
305
G
O
HOH
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
G
O
HOH
1_555
87.0
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
131
A
OD1
ASP
131
1_555
49.7
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
TRP
133
A
O
TRP
133
1_555
108.3
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
TRP
133
A
O
TRP
133
1_555
79.9
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASN
135
A
OD1
ASN
135
1_555
162.9
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASN
135
A
OD1
ASN
135
1_555
147.4
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
ASN
135
A
OD1
ASN
135
1_555
82.1
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
79.8
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
110.4
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
74.4
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
90.4
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
G
O
HOH
1_555
111.0
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
G
O
HOH
1_555
74.6
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
G
O
HOH
1_555
96.0
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
G
O
HOH
1_555
80.6
A
ASP
140
A
OD2
ASP
140
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
G
O
HOH
1_555
167.6
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
73.8
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
105.6
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
173.7
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
94.5
A
ASP
140
A
OD2
ASP
140
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
100.4
A
HOH
329
G
O
HOH
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
88.7
A
ASN
18
GLYCOSYLATION SITE
A
ASN
18
ASN
A
PCA
1
PYROGLUTAMIC ACID
A
PCA
1
GLN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
8
A
O
TYR
8
A
N
TRP
232
A
N
TRP
232
A
O
THR
237
A
O
THR
237
A
N
SER
71
A
N
SER
71
A
O
PHE
78
A
O
PHE
78
A
N
ALA
172
A
N
ALA
172
A
O
ASP
179
A
O
ASP
179
A
N
ILE
184
A
N
ILE
184
A
N
TYR
191
A
N
TYR
191
A
O
ARG
195
A
O
ARG
195
A
O
LEU
25
A
O
LEU
25
A
N
GLN
53
A
N
GLN
53
A
N
TYR
56
A
N
TYR
56
A
O
ILE
215
A
O
ILE
215
A
N
ARG
214
A
N
ARG
214
A
O
GLY
90
A
O
GLY
90
A
O
LEU
95
A
O
LEU
95
A
N
VAL
126
A
N
VAL
126
A
O
ASP
131
A
O
ASP
131
A
N
HIS
145
A
N
HIS
145
A
O
ILE
148
A
O
ILE
148
A
N
ALA
157
A
N
ALA
157
A
O
ILE
31
A
O
ILE
31
A
N
ALA
34
A
N
ALA
34
A
N
LEU
37
A
N
LEU
37
A
O
THR
227
A
O
THR
227
A
O
TYR
228
A
O
TYR
228
A
N
LEU
79
A
N
LEU
79
1
A
HOH
403
G
HOH
1
A
HOH
404
G
HOH
1
5.69
0.80
106.30
111.99
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
12
12
12
N
1
-7.96
1.30
127.00
119.04
A
A
A
CB
CG
CD1
TRP
TRP
TRP
12
12
12
N
1
-5.74
0.80
107.30
101.56
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
12
12
12
N
1
5.67
0.90
133.90
139.57
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
12
12
12
N
1
3.05
0.50
120.30
123.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
48
48
48
N
1
4.98
0.80
106.30
111.28
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
63
63
63
N
1
-5.15
0.80
107.30
102.15
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
63
63
63
N
1
-5.38
0.60
121.00
115.62
A
A
A
CB
CG
CD2
TYR
TYR
TYR
73
73
73
N
1
7.51
0.80
106.30
113.81
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
133
133
133
N
1
-6.06
1.00
110.10
104.04
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
133
133
133
N
1
-6.01
0.80
107.30
101.29
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
133
133
133
N
1
6.14
0.80
106.30
112.44
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
138
138
138
N
1
-5.96
0.80
107.30
101.34
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
138
138
138
N
1
-4.68
0.60
121.00
116.32
A
A
A
CB
CG
CD2
TYR
TYR
TYR
143
143
143
N
1
5.10
0.80
106.30
111.40
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
161
161
161
N
1
-4.86
0.80
107.30
102.44
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
161
161
161
N
1
4.04
0.50
120.30
124.34
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
195
195
195
N
1
-4.33
0.60
121.00
116.67
A
A
A
CB
CG
CD1
TYR
TYR
TYR
197
197
197
N
1
4.88
0.50
120.30
125.18
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
214
214
214
N
1
-5.43
0.50
120.30
114.87
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
214
214
214
N
1
A
A
NE2
CD2
HIS
HIS
201
201
-0.076
0.011
1.373
1.297
N
1
A
TYR
83
-108.07
41.59
1
A
LYS
103
-111.85
-137.11
1
A
PRO
142
-77.52
40.81
1
A
ASN
151
57.60
18.84
1
A
ASP
239
-35.28
126.26
1
A
ASN
242
72.39
-5.71
RESIDUES 1 AND 241 - 243 HAVE VERY HIGH TEMPERATURE FACTORS
AND ARE NOT WELL DETERMINED.
0.181
2.0
19212
1
2.0
144
2140
92
0
1904
0.016
3.02
model building
X-PLOR
refinement
PROLSQ
refinement
X-PLOR
phasing
X-PLOR
LECTIN (FOURTH ISOLATED FROM (GRIFFONIA SIMPLICIFOLIA)) COMPLEX WITH LEWIS B HUMAN BLOOD GROUP DETERMINANT (GS4LEB)
STRUCTURES OF THE LECTIN IV OF GRIFFONIA SIMPLICIFOLIA AND ITS COMPLEX WITH THE LEWIS B HUMAN BLOOD GROUP DETERMINANT AT 2.0 ANGSTROMS RESOLUTION
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
A
GLU
162
A
GLU
162
HELX_P
A
TYR
167
A
TYR
167
1
H1
6
A
LEU
205
A
LEU
205
HELX_P
A
LEU
209
A
LEU
209
1
H2
5
covale
1.352
both
A
PCA
1
A
C
PCA
1
1_555
A
ASN
2
A
N
ASN
2
1_555
covale
1.443
one
N-Glycosylation
A
ASN
18
A
ND2
ASN
18
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.428
one
B
MAG
1
B
O3
MAG
1_555
B
GAL
2
B
C1
GAL
1_555
covale
1.458
one
B
MAG
1
B
O4
MAG
1_555
B
FUC
4
B
C1
FUC
1_555
covale
1.411
one
B
GAL
2
B
O2
GAL
1_555
B
FUC
3
B
C1
FUC
1_555
covale
1.427
one
C
NAG
1
C
O3
NAG
1_555
C
FUC
2
C
C1
FUC
1_555
covale
1.419
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
3
C
C1
NAG
1_555
metalc
2.243
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.053
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.658
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.395
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.304
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.467
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.376
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.287
A
ASP
140
A
OD2
ASP
140
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.218
A
HIS
145
A
NE2
HIS
145
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.057
A
MN
250
D
MN
MN
1_555
A
HOH
305
G
O
HOH
1_555
metalc
2.183
A
MN
250
D
MN
MN
1_555
A
HOH
332
G
O
HOH
1_555
metalc
2.210
A
CA
251
E
CA
CA
1_555
A
HOH
329
G
O
HOH
1_555
metalc
2.551
A
CA
251
E
CA
CA
1_555
A
HOH
333
G
O
HOH
1_555
LECTIN
LECTIN
A
ALA
85
A
ALA
85
1
A
PRO
86
A
PRO
86
-6.36
A
ALA
88
A
ALA
88
1
A
ASP
89
A
ASP
89
1.48
A
VAL
221
A
VAL
221
1
A
GLY
222
A
GLY
222
1.00
LEC4_GRISI
UNP
1
1
P24146
QNTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL
KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR
WENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFSTLDG
TNK
2
243
1LED
2
243
P24146
A
1
2
243
6
7
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
4
A
VAL
4
A
TYR
8
A
TYR
8
A
TRP
232
A
TRP
232
A
THR
237
A
THR
237
A
SER
71
A
SER
71
A
PHE
78
A
PHE
78
A
ALA
172
A
ALA
172
A
ASP
179
A
ASP
179
A
LYS
183
A
LYS
183
A
TYR
191
A
TYR
191
A
ARG
195
A
ARG
195
A
VAL
203
A
VAL
203
A
THR
23
A
THR
23
A
LEU
25
A
LEU
25
A
SER
50
A
SER
50
A
TYR
56
A
TYR
56
A
ARG
214
A
ARG
214
A
VAL
221
A
VAL
221
A
GLY
90
A
GLY
90
A
ALA
96
A
ALA
96
A
VAL
125
A
VAL
125
A
ASP
131
A
ASP
131
A
HIS
145
A
HIS
145
A
ASN
151
A
ASN
151
A
ALA
157
A
ALA
157
A
THR
159
A
THR
159
A
THR
29
A
THR
29
A
ILE
31
A
ILE
31
A
ALA
34
A
ALA
34
A
LEU
37
A
LEU
37
A
ASP
224
A
ASP
224
A
ILE
229
A
ILE
229
A
LEU
79
A
LEU
79
A
TYR
83
A
TYR
83
Unknown
12
Unknown
6
Unknown
6
A
ARG
48
A
ARG
48
12
1_555
A
SER
49
A
SER
49
12
1_555
A
ASP
89
A
ASP
89
12
1_555
A
TYR
105
A
TYR
105
12
1_555
A
GLY
107
A
GLY
107
12
1_555
A
PHE
108
A
PHE
108
12
1_555
A
HIS
114
A
HIS
114
12
1_555
A
TRP
133
A
TRP
133
12
1_555
A
ASN
135
A
ASN
135
12
1_555
A
TRP
138
A
TRP
138
12
1_555
A
GLY
222
A
GLY
222
12
1_555
A
TYR
223
A
TYR
223
12
1_555
A
GLU
129
A
GLU
129
6
1_555
A
ASP
131
A
ASP
131
6
1_555
A
ASP
140
A
ASP
140
6
1_555
A
HIS
145
A
HIS
145
6
1_555
A
HOH
305
G
HOH
6
1_555
A
HOH
332
G
HOH
6
1_555
A
ASP
131
A
ASP
131
6
1_555
A
TRP
133
A
TRP
133
6
1_555
A
ASN
135
A
ASN
135
6
1_555
A
ASP
140
A
ASP
140
6
1_555
A
HOH
329
G
HOH
6
1_555
A
HOH
333
G
HOH
6
1_555
94
P 42 21 2