0.012674 0.000000 0.000000 0.000000 0.012674 0.000000 0.000000 0.000000 0.011223 0.00000 0.00000 0.00000 RESIDUE PRO 86 IS A CIS PROLINE. PEPTIDE BONDS ALA 88 - ASP 89 AND VAL 221 - GLY 222 ARE CIS PEPTIDE BONDS AND ARE INVOLVED IN CARBOHYDRATE BINDING SITE. WATERS 403 AND 404 OCCUPY SPECIAL POSITIONS AND ARE SHARED BY TWO SYMMETRY RELATED MOLECULES. Delbaere, L. Vandonselaar, M. Quail, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 78.900 78.900 89.100 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C6 H12 O5 164.156 alpha-L-fucopyranose L-saccharide, alpha linking C6 H12 O6 180.156 beta-D-galactopyranose D-saccharide, beta linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H17 N O6 235.234 n methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside D-saccharide Mn 2 54.938 MANGANESE (II) ION non-polymer C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C5 H7 N O3 129.114 n PYROGLUTAMIC ACID L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 230 950 965 10.1006/jmbi.1993.1212 8478943 Structures of the lectin IV of Griffonia simplicifolia and its complex with the Lewis b human blood group determinant at 2.0 A resolution. 1993 CA Can.J.Chem. CJCHAG 0015 0008-4042 68 1116 Molecular Recognition of a Human Blood Group Determinant by a Plant Lectin 1990 US Trans.Am.Crystallogr.Assoc. TACAAH 0285 0065-8006 25 65 Structures of Griffonia Simplicifolia Lectin Iv and its Complex with a Synthetic Lewis B Blood Group Determinant 1991 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 26816.678 WEST-CENTRAL AFRICAN LEGUME LECTIN IV 1 man polymer 689.656 alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside 1 man branched 570.542 alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 54.938 MANGANESE (II) ION 1 syn non-polymer 40.078 CALCIUM ION 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 144 nat water no yes (PCA)NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSF TFLLKNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSV ATTRWENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFS TLDGTNK QNTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR WENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFSTLDG TNK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 3850 Griffonia simplicifolia 2.58 52.41 pdbx_database_status struct_conf struct_conf_type chem_comp entity_poly pdbx_struct_mod_residue struct_conn atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_struct_special_symmetry struct_asym struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Derived calculations Other Data collection Derived calculations Polymer sequence Atomic model Data collection Derived calculations Structure summary 1 0 1994-01-31 1 1 2008-03-03 1 2 2011-07-13 1 3 2017-11-29 2 0 2019-12-25 3 0 2020-07-29 _pdbx_database_status.process_site _chem_comp.type _entity_poly.pdbx_seq_one_letter_code_can _pdbx_struct_mod_residue.parent_comp_id _struct_conn.pdbx_leaving_atom_flag _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _pdbx_struct_special_symmetry.label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id NAG 255 n B MAG 1 GAL 253 n B GAL 2 FUC 252 n B FUC 3 FUC 254 n B FUC 4 NAG 257 n C NAG 1 FUC 262 n C FUC 2 NAG 256 n C NAG 3 LFucpa a-L-fucopyranose a-L-Fucp Fuc DGalpb b-D-galactopyranose b-D-Galp Gal DGlcpNAc[1Me]b 1-methyl-N-acetyl-b-D-glucopyranose a-methyl-N-acetyl-D-glucosamine DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc Y BNL 1992-12-17 REL REL oligosaccharide oligosaccharide LFucpa1-2DGalpb1-3[LFucpa1-4]DGlcpNAc[1Me]b1-OME 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/3,4,3/[a2122h-1b_1-5_1*OC_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3-3/a3-b1_a4-d1_b2-c1 2 PDB2Glycan 1.1.0 WURCS [][methyl]{[(1+1)][b-D-GlcpNAc]{[(3+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}[(4+1)][a-L-Fucp]{}}} 2 PDB-CARE LINUCS LFucpa1-3[DGlcpNAcb1-4]DGlcpNAcb1- 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-1/a3-b1_a4-c1 3 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{}}} 3 PDB-CARE LINUCS C1 O3 GAL MAG 2 1 2 O1 HO3 sing C1 O2 FUC GAL 3 2 2 O1 HO2 sing C1 O4 FUC MAG 4 1 2 O1 HO4 sing C1 O3 FUC NAG 2 1 3 O1 HO3 sing C1 O4 NAG NAG 3 1 3 O1 HO4 sing n n n n n n n MN MANGANESE (II) ION CA CALCIUM ION SO4 SULFATE ION HOH water MN 250 4 MN MN 250 A CA 251 5 CA CA 251 A SO4 500 6 SO4 SO4 500 A HOH 301 7 HOH HOH 301 A HOH 302 7 HOH HOH 302 A HOH 303 7 HOH HOH 303 A HOH 304 7 HOH HOH 304 A HOH 305 7 HOH HOH 305 A HOH 306 7 HOH HOH 306 A HOH 307 7 HOH HOH 307 A HOH 308 7 HOH HOH 308 A HOH 309 7 HOH HOH 309 A HOH 310 7 HOH HOH 310 A HOH 311 7 HOH HOH 311 A HOH 312 7 HOH HOH 312 A HOH 313 7 HOH HOH 313 A HOH 314 7 HOH HOH 314 A HOH 315 7 HOH HOH 315 A HOH 316 7 HOH HOH 316 A HOH 317 7 HOH HOH 317 A HOH 318 7 HOH HOH 318 A HOH 319 7 HOH HOH 319 A HOH 320 7 HOH HOH 320 A HOH 321 7 HOH HOH 321 A HOH 322 7 HOH HOH 322 A HOH 323 7 HOH HOH 323 A HOH 324 7 HOH HOH 324 A HOH 325 7 HOH HOH 325 A HOH 326 7 HOH HOH 326 A HOH 327 7 HOH HOH 327 A HOH 328 7 HOH HOH 328 A HOH 329 7 HOH HOH 329 A HOH 330 7 HOH HOH 330 A HOH 331 7 HOH HOH 331 A HOH 332 7 HOH HOH 332 A HOH 333 7 HOH HOH 333 A HOH 334 7 HOH HOH 334 A HOH 335 7 HOH HOH 335 A HOH 336 7 HOH HOH 336 A HOH 337 7 HOH HOH 337 A HOH 338 7 HOH HOH 338 A HOH 339 7 HOH HOH 339 A HOH 340 7 HOH HOH 340 A HOH 341 7 HOH HOH 341 A HOH 342 7 HOH HOH 342 A HOH 343 7 HOH HOH 343 A HOH 344 7 HOH HOH 344 A HOH 345 7 HOH HOH 345 A HOH 346 7 HOH HOH 346 A HOH 347 7 HOH HOH 347 A HOH 348 7 HOH HOH 348 A HOH 349 7 HOH HOH 349 A HOH 350 7 HOH HOH 350 A HOH 351 7 HOH HOH 351 A HOH 352 7 HOH HOH 352 A HOH 353 7 HOH HOH 353 A HOH 354 7 HOH HOH 354 A HOH 355 7 HOH HOH 355 A HOH 356 7 HOH HOH 356 A HOH 357 7 HOH HOH 357 A HOH 358 7 HOH HOH 358 A HOH 359 7 HOH HOH 359 A HOH 360 7 HOH HOH 360 A HOH 361 7 HOH HOH 361 A HOH 362 7 HOH HOH 362 A HOH 363 7 HOH HOH 363 A HOH 364 7 HOH HOH 364 A HOH 365 7 HOH HOH 365 A HOH 366 7 HOH HOH 366 A HOH 367 7 HOH HOH 367 A HOH 368 7 HOH HOH 368 A HOH 369 7 HOH HOH 369 A HOH 370 7 HOH HOH 370 A HOH 371 7 HOH HOH 371 A HOH 372 7 HOH HOH 372 A HOH 373 7 HOH HOH 373 A HOH 374 7 HOH HOH 374 A HOH 375 7 HOH HOH 375 A HOH 376 7 HOH HOH 376 A HOH 377 7 HOH HOH 377 A HOH 378 7 HOH HOH 378 A HOH 379 7 HOH HOH 379 A HOH 380 7 HOH HOH 380 A HOH 381 7 HOH HOH 381 A HOH 382 7 HOH HOH 382 A HOH 383 7 HOH HOH 383 A HOH 384 7 HOH HOH 384 A HOH 385 7 HOH HOH 385 A HOH 386 7 HOH HOH 386 A HOH 387 7 HOH HOH 387 A HOH 388 7 HOH HOH 388 A HOH 389 7 HOH HOH 389 A HOH 390 7 HOH HOH 390 A HOH 391 7 HOH HOH 391 A HOH 392 7 HOH HOH 392 A HOH 393 7 HOH HOH 393 A HOH 394 7 HOH HOH 394 A HOH 395 7 HOH HOH 395 A HOH 396 7 HOH HOH 396 A HOH 397 7 HOH HOH 397 A HOH 398 7 HOH HOH 398 A HOH 399 7 HOH HOH 399 A HOH 400 7 HOH HOH 400 A HOH 401 7 HOH HOH 401 A HOH 402 7 HOH HOH 402 A HOH 403 7 HOH HOH 403 A HOH 404 7 HOH HOH 404 A HOH 405 7 HOH HOH 405 A HOH 406 7 HOH HOH 406 A HOH 407 7 HOH HOH 407 A HOH 408 7 HOH HOH 408 A HOH 409 7 HOH HOH 409 A HOH 410 7 HOH HOH 410 A HOH 411 7 HOH HOH 411 A HOH 412 7 HOH HOH 412 A HOH 413 7 HOH HOH 413 A HOH 414 7 HOH HOH 414 A HOH 415 7 HOH HOH 415 A HOH 416 7 HOH HOH 416 A HOH 417 7 HOH HOH 417 A HOH 418 7 HOH HOH 418 A HOH 419 7 HOH HOH 419 A HOH 420 7 HOH HOH 420 A HOH 421 7 HOH HOH 421 A HOH 422 7 HOH HOH 422 A HOH 423 7 HOH HOH 423 A HOH 424 7 HOH HOH 424 A HOH 425 7 HOH HOH 425 A HOH 426 7 HOH HOH 426 A HOH 427 7 HOH HOH 427 A HOH 428 7 HOH HOH 428 A HOH 429 7 HOH HOH 429 A HOH 430 7 HOH HOH 430 A HOH 431 7 HOH HOH 431 A HOH 432 7 HOH HOH 432 A HOH 433 7 HOH HOH 433 A HOH 434 7 HOH HOH 434 A HOH 435 7 HOH HOH 435 A HOH 450 7 HOH HOH 450 A HOH 451 7 HOH HOH 451 A HOH 452 7 HOH HOH 452 A HOH 453 7 HOH HOH 453 A HOH 454 7 HOH HOH 454 A HOH 455 7 HOH HOH 455 A HOH 456 7 HOH HOH 456 A HOH 457 7 HOH HOH 457 A HOH 458 7 HOH HOH 458 A PCA 1 n 1 PCA 1 A ASN 2 n 2 ASN 2 A THR 3 n 3 THR 3 A VAL 4 n 4 VAL 4 A ASN 5 n 5 ASN 5 A PHE 6 n 6 PHE 6 A THR 7 n 7 THR 7 A TYR 8 n 8 TYR 8 A PRO 9 n 9 PRO 9 A ASP 10 n 10 ASP 10 A PHE 11 n 11 PHE 11 A TRP 12 n 12 TRP 12 A SER 13 n 13 SER 13 A TYR 14 n 14 TYR 14 A SER 15 n 15 SER 15 A LEU 16 n 16 LEU 16 A LYS 17 n 17 LYS 17 A ASN 18 n 18 ASN 18 A GLY 19 n 19 GLY 19 A THR 20 n 20 THR 20 A GLU 21 n 21 GLU 21 A ILE 22 n 22 ILE 22 A THR 23 n 23 THR 23 A PHE 24 n 24 PHE 24 A LEU 25 n 25 LEU 25 A GLY 26 n 26 GLY 26 A ASP 27 n 27 ASP 27 A ALA 28 n 28 ALA 28 A THR 29 n 29 THR 29 A ARG 30 n 30 ARG 30 A ILE 31 n 31 ILE 31 A PRO 32 n 32 PRO 32 A GLY 33 n 33 GLY 33 A ALA 34 n 34 ALA 34 A LEU 35 n 35 LEU 35 A GLN 36 n 36 GLN 36 A LEU 37 n 37 LEU 37 A THR 38 n 38 THR 38 A LYS 39 n 39 LYS 39 A THR 40 n 40 THR 40 A ASP 41 n 41 ASP 41 A ALA 42 n 42 ALA 42 A ASN 43 n 43 ASN 43 A GLY 44 n 44 GLY 44 A ASN 45 n 45 ASN 45 A PRO 46 n 46 PRO 46 A VAL 47 n 47 VAL 47 A ARG 48 n 48 ARG 48 A SER 49 n 49 SER 49 A SER 50 n 50 SER 50 A ALA 51 n 51 ALA 51 A GLY 52 n 52 GLY 52 A GLN 53 n 53 GLN 53 A ALA 54 n 54 ALA 54 A SER 55 n 55 SER 55 A TYR 56 n 56 TYR 56 A SER 57 n 57 SER 57 A GLU 58 n 58 GLU 58 A PRO 59 n 59 PRO 59 A VAL 60 n 60 VAL 60 A PHE 61 n 61 PHE 61 A LEU 62 n 62 LEU 62 A TRP 63 n 63 TRP 63 A ASP 64 n 64 ASP 64 A SER 65 n 65 SER 65 A THR 66 n 66 THR 66 A GLY 67 n 67 GLY 67 A LYS 68 n 68 LYS 68 A ALA 69 n 69 ALA 69 A ALA 70 n 70 ALA 70 A SER 71 n 71 SER 71 A PHE 72 n 72 PHE 72 A TYR 73 n 73 TYR 73 A THR 74 n 74 THR 74 A SER 75 n 75 SER 75 A PHE 76 n 76 PHE 76 A THR 77 n 77 THR 77 A PHE 78 n 78 PHE 78 A LEU 79 n 79 LEU 79 A LEU 80 n 80 LEU 80 A LYS 81 n 81 LYS 81 A ASN 82 n 82 ASN 82 A TYR 83 n 83 TYR 83 A GLY 84 n 84 GLY 84 A ALA 85 n 85 ALA 85 A PRO 86 n 86 PRO 86 A THR 87 n 87 THR 87 A ALA 88 n 88 ALA 88 A ASP 89 n 89 ASP 89 A GLY 90 n 90 GLY 90 A LEU 91 n 91 LEU 91 A ALA 92 n 92 ALA 92 A PHE 93 n 93 PHE 93 A PHE 94 n 94 PHE 94 A LEU 95 n 95 LEU 95 A ALA 96 n 96 ALA 96 A PRO 97 n 97 PRO 97 A VAL 98 n 98 VAL 98 A ASP 99 n 99 ASP 99 A SER 100 n 100 SER 100 A SER 101 n 101 SER 101 A VAL 102 n 102 VAL 102 A LYS 103 n 103 LYS 103 A ASP 104 n 104 ASP 104 A TYR 105 n 105 TYR 105 A GLY 106 n 106 GLY 106 A GLY 107 n 107 GLY 107 A PHE 108 n 108 PHE 108 A LEU 109 n 109 LEU 109 A GLY 110 n 110 GLY 110 A LEU 111 n 111 LEU 111 A PHE 112 n 112 PHE 112 A ARG 113 n 113 ARG 113 A HIS 114 n 114 HIS 114 A GLU 115 n 115 GLU 115 A THR 116 n 116 THR 116 A ALA 117 n 117 ALA 117 A ALA 118 n 118 ALA 118 A ASP 119 n 119 ASP 119 A PRO 120 n 120 PRO 120 A SER 121 n 121 SER 121 A LYS 122 n 122 LYS 122 A ASN 123 n 123 ASN 123 A GLN 124 n 124 GLN 124 A VAL 125 n 125 VAL 125 A VAL 126 n 126 VAL 126 A ALA 127 n 127 ALA 127 A VAL 128 n 128 VAL 128 A GLU 129 n 129 GLU 129 A PHE 130 n 130 PHE 130 A ASP 131 n 131 ASP 131 A THR 132 n 132 THR 132 A TRP 133 n 133 TRP 133 A ILE 134 n 134 ILE 134 A ASN 135 n 135 ASN 135 A LYS 136 n 136 LYS 136 A ASP 137 n 137 ASP 137 A TRP 138 n 138 TRP 138 A ASN 139 n 139 ASN 139 A ASP 140 n 140 ASP 140 A PRO 141 n 141 PRO 141 A PRO 142 n 142 PRO 142 A TYR 143 n 143 TYR 143 A PRO 144 n 144 PRO 144 A HIS 145 n 145 HIS 145 A ILE 146 n 146 ILE 146 A GLY 147 n 147 GLY 147 A ILE 148 n 148 ILE 148 A ASP 149 n 149 ASP 149 A VAL 150 n 150 VAL 150 A ASN 151 n 151 ASN 151 A SER 152 n 152 SER 152 A ILE 153 n 153 ILE 153 A VAL 154 n 154 VAL 154 A SER 155 n 155 SER 155 A VAL 156 n 156 VAL 156 A ALA 157 n 157 ALA 157 A THR 158 n 158 THR 158 A THR 159 n 159 THR 159 A ARG 160 n 160 ARG 160 A TRP 161 n 161 TRP 161 A GLU 162 n 162 GLU 162 A ASN 163 n 163 ASN 163 A ASP 164 n 164 ASP 164 A ASP 165 n 165 ASP 165 A ALA 166 n 166 ALA 166 A TYR 167 n 167 TYR 167 A GLY 168 n 168 GLY 168 A SER 169 n 169 SER 169 A SER 170 n 170 SER 170 A ILE 171 n 171 ILE 171 A ALA 172 n 172 ALA 172 A THR 173 n 173 THR 173 A ALA 174 n 174 ALA 174 A HIS 175 n 175 HIS 175 A ILE 176 n 176 ILE 176 A THR 177 n 177 THR 177 A TYR 178 n 178 TYR 178 A ASP 179 n 179 ASP 179 A ALA 180 n 180 ALA 180 A ARG 181 n 181 ARG 181 A SER 182 n 182 SER 182 A LYS 183 n 183 LYS 183 A ILE 184 n 184 ILE 184 A LEU 185 n 185 LEU 185 A THR 186 n 186 THR 186 A VAL 187 n 187 VAL 187 A LEU 188 n 188 LEU 188 A LEU 189 n 189 LEU 189 A SER 190 n 190 SER 190 A TYR 191 n 191 TYR 191 A GLU 192 n 192 GLU 192 A HIS 193 n 193 HIS 193 A GLY 194 n 194 GLY 194 A ARG 195 n 195 ARG 195 A ASP 196 n 196 ASP 196 A TYR 197 n 197 TYR 197 A ILE 198 n 198 ILE 198 A LEU 199 n 199 LEU 199 A SER 200 n 200 SER 200 A HIS 201 n 201 HIS 201 A VAL 202 n 202 VAL 202 A VAL 203 n 203 VAL 203 A ASP 204 n 204 ASP 204 A LEU 205 n 205 LEU 205 A ALA 206 n 206 ALA 206 A LYS 207 n 207 LYS 207 A VAL 208 n 208 VAL 208 A LEU 209 n 209 LEU 209 A PRO 210 n 210 PRO 210 A GLN 211 n 211 GLN 211 A LYS 212 n 212 LYS 212 A VAL 213 n 213 VAL 213 A ARG 214 n 214 ARG 214 A ILE 215 n 215 ILE 215 A GLY 216 n 216 GLY 216 A PHE 217 n 217 PHE 217 A SER 218 n 218 SER 218 A ALA 219 n 219 ALA 219 A GLY 220 n 220 GLY 220 A VAL 221 n 221 VAL 221 A GLY 222 n 222 GLY 222 A TYR 223 n 223 TYR 223 A ASP 224 n 224 ASP 224 A GLU 225 n 225 GLU 225 A VAL 226 n 226 VAL 226 A THR 227 n 227 THR 227 A TYR 228 n 228 TYR 228 A ILE 229 n 229 ILE 229 A LEU 230 n 230 LEU 230 A SER 231 n 231 SER 231 A TRP 232 n 232 TRP 232 A HIS 233 n 233 HIS 233 A PHE 234 n 234 PHE 234 A PHE 235 n 235 PHE 235 A SER 236 n 236 SER 236 A THR 237 n 237 THR 237 A LEU 238 n 238 LEU 238 A ASP 239 n 239 ASP 239 A GLY 240 n 240 GLY 240 A THR 241 n 241 THR 241 A ASN 242 n 242 ASN 242 A LYS 243 n 243 LYS 243 A author_defined_assembly 2 dimeric A GLU 129 A OE2 GLU 129 1_555 A MN 250 D MN MN 1_555 A ASP 131 A OD2 ASP 131 1_555 93.8 A GLU 129 A OE2 GLU 129 1_555 A MN 250 D MN MN 1_555 A ASP 140 A OD1 ASP 140 1_555 169.9 A ASP 131 A OD2 ASP 131 1_555 A MN 250 D MN MN 1_555 A ASP 140 A OD1 ASP 140 1_555 94.3 A GLU 129 A OE2 GLU 129 1_555 A MN 250 D MN MN 1_555 A HIS 145 A NE2 HIS 145 1_555 95.8 A ASP 131 A OD2 ASP 131 1_555 A MN 250 D MN MN 1_555 A HIS 145 A NE2 HIS 145 1_555 83.0 A ASP 140 A OD1 ASP 140 1_555 A MN 250 D MN MN 1_555 A HIS 145 A NE2 HIS 145 1_555 91.2 A GLU 129 A OE2 GLU 129 1_555 A MN 250 D MN MN 1_555 A HOH 305 G O HOH 1_555 87.8 A ASP 131 A OD2 ASP 131 1_555 A MN 250 D MN MN 1_555 A HOH 305 G O HOH 1_555 177.6 A ASP 140 A OD1 ASP 140 1_555 A MN 250 D MN MN 1_555 A HOH 305 G O HOH 1_555 84.2 A HIS 145 A NE2 HIS 145 1_555 A MN 250 D MN MN 1_555 A HOH 305 G O HOH 1_555 95.1 A GLU 129 A OE2 GLU 129 1_555 A MN 250 D MN MN 1_555 A HOH 332 G O HOH 1_555 88.3 A ASP 131 A OD2 ASP 131 1_555 A MN 250 D MN MN 1_555 A HOH 332 G O HOH 1_555 94.7 A ASP 140 A OD1 ASP 140 1_555 A MN 250 D MN MN 1_555 A HOH 332 G O HOH 1_555 85.1 A HIS 145 A NE2 HIS 145 1_555 A MN 250 D MN MN 1_555 A HOH 332 G O HOH 1_555 175.5 A HOH 305 G O HOH 1_555 A MN 250 D MN MN 1_555 A HOH 332 G O HOH 1_555 87.0 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 A ASP 131 A OD1 ASP 131 1_555 49.7 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 A TRP 133 A O TRP 133 1_555 108.3 A ASP 131 A OD1 ASP 131 1_555 A CA 251 E CA CA 1_555 A TRP 133 A O TRP 133 1_555 79.9 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 A ASN 135 A OD1 ASN 135 1_555 162.9 A ASP 131 A OD1 ASP 131 1_555 A CA 251 E CA CA 1_555 A ASN 135 A OD1 ASN 135 1_555 147.4 A TRP 133 A O TRP 133 1_555 A CA 251 E CA CA 1_555 A ASN 135 A OD1 ASN 135 1_555 82.1 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 A ASP 140 A OD2 ASP 140 1_555 79.8 A ASP 131 A OD1 ASP 131 1_555 A CA 251 E CA CA 1_555 A ASP 140 A OD2 ASP 140 1_555 110.4 A TRP 133 A O TRP 133 1_555 A CA 251 E CA CA 1_555 A ASP 140 A OD2 ASP 140 1_555 74.4 A ASN 135 A OD1 ASN 135 1_555 A CA 251 E CA CA 1_555 A ASP 140 A OD2 ASP 140 1_555 90.4 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 A HOH 329 G O HOH 1_555 111.0 A ASP 131 A OD1 ASP 131 1_555 A CA 251 E CA CA 1_555 A HOH 329 G O HOH 1_555 74.6 A TRP 133 A O TRP 133 1_555 A CA 251 E CA CA 1_555 A HOH 329 G O HOH 1_555 96.0 A ASN 135 A OD1 ASN 135 1_555 A CA 251 E CA CA 1_555 A HOH 329 G O HOH 1_555 80.6 A ASP 140 A OD2 ASP 140 1_555 A CA 251 E CA CA 1_555 A HOH 329 G O HOH 1_555 167.6 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 73.8 A ASP 131 A OD1 ASP 131 1_555 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 105.6 A TRP 133 A O TRP 133 1_555 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 173.7 A ASN 135 A OD1 ASN 135 1_555 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 94.5 A ASP 140 A OD2 ASP 140 1_555 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 100.4 A HOH 329 G O HOH 1_555 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 88.7 A ASN 18 GLYCOSYLATION SITE A ASN 18 ASN A PCA 1 PYROGLUTAMIC ACID A PCA 1 GLN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 8 A O TYR 8 A N TRP 232 A N TRP 232 A O THR 237 A O THR 237 A N SER 71 A N SER 71 A O PHE 78 A O PHE 78 A N ALA 172 A N ALA 172 A O ASP 179 A O ASP 179 A N ILE 184 A N ILE 184 A N TYR 191 A N TYR 191 A O ARG 195 A O ARG 195 A O LEU 25 A O LEU 25 A N GLN 53 A N GLN 53 A N TYR 56 A N TYR 56 A O ILE 215 A O ILE 215 A N ARG 214 A N ARG 214 A O GLY 90 A O GLY 90 A O LEU 95 A O LEU 95 A N VAL 126 A N VAL 126 A O ASP 131 A O ASP 131 A N HIS 145 A N HIS 145 A O ILE 148 A O ILE 148 A N ALA 157 A N ALA 157 A O ILE 31 A O ILE 31 A N ALA 34 A N ALA 34 A N LEU 37 A N LEU 37 A O THR 227 A O THR 227 A O TYR 228 A O TYR 228 A N LEU 79 A N LEU 79 1 A HOH 403 G HOH 1 A HOH 404 G HOH 1 5.69 0.80 106.30 111.99 A A A CD1 CG CD2 TRP TRP TRP 12 12 12 N 1 -7.96 1.30 127.00 119.04 A A A CB CG CD1 TRP TRP TRP 12 12 12 N 1 -5.74 0.80 107.30 101.56 A A A CE2 CD2 CG TRP TRP TRP 12 12 12 N 1 5.67 0.90 133.90 139.57 A A A CG CD2 CE3 TRP TRP TRP 12 12 12 N 1 3.05 0.50 120.30 123.35 A A A NE CZ NH1 ARG ARG ARG 48 48 48 N 1 4.98 0.80 106.30 111.28 A A A CD1 CG CD2 TRP TRP TRP 63 63 63 N 1 -5.15 0.80 107.30 102.15 A A A CE2 CD2 CG TRP TRP TRP 63 63 63 N 1 -5.38 0.60 121.00 115.62 A A A CB CG CD2 TYR TYR TYR 73 73 73 N 1 7.51 0.80 106.30 113.81 A A A CD1 CG CD2 TRP TRP TRP 133 133 133 N 1 -6.06 1.00 110.10 104.04 A A A CG CD1 NE1 TRP TRP TRP 133 133 133 N 1 -6.01 0.80 107.30 101.29 A A A CE2 CD2 CG TRP TRP TRP 133 133 133 N 1 6.14 0.80 106.30 112.44 A A A CD1 CG CD2 TRP TRP TRP 138 138 138 N 1 -5.96 0.80 107.30 101.34 A A A CE2 CD2 CG TRP TRP TRP 138 138 138 N 1 -4.68 0.60 121.00 116.32 A A A CB CG CD2 TYR TYR TYR 143 143 143 N 1 5.10 0.80 106.30 111.40 A A A CD1 CG CD2 TRP TRP TRP 161 161 161 N 1 -4.86 0.80 107.30 102.44 A A A CE2 CD2 CG TRP TRP TRP 161 161 161 N 1 4.04 0.50 120.30 124.34 A A A NE CZ NH1 ARG ARG ARG 195 195 195 N 1 -4.33 0.60 121.00 116.67 A A A CB CG CD1 TYR TYR TYR 197 197 197 N 1 4.88 0.50 120.30 125.18 A A A NE CZ NH1 ARG ARG ARG 214 214 214 N 1 -5.43 0.50 120.30 114.87 A A A NE CZ NH2 ARG ARG ARG 214 214 214 N 1 A A NE2 CD2 HIS HIS 201 201 -0.076 0.011 1.373 1.297 N 1 A TYR 83 -108.07 41.59 1 A LYS 103 -111.85 -137.11 1 A PRO 142 -77.52 40.81 1 A ASN 151 57.60 18.84 1 A ASP 239 -35.28 126.26 1 A ASN 242 72.39 -5.71 RESIDUES 1 AND 241 - 243 HAVE VERY HIGH TEMPERATURE FACTORS AND ARE NOT WELL DETERMINED. 0.181 2.0 19212 1 2.0 144 2140 92 0 1904 0.016 3.02 model building X-PLOR refinement PROLSQ refinement X-PLOR phasing X-PLOR LECTIN (FOURTH ISOLATED FROM (GRIFFONIA SIMPLICIFOLIA)) COMPLEX WITH LEWIS B HUMAN BLOOD GROUP DETERMINANT (GS4LEB) STRUCTURES OF THE LECTIN IV OF GRIFFONIA SIMPLICIFOLIA AND ITS COMPLEX WITH THE LEWIS B HUMAN BLOOD GROUP DETERMINANT AT 2.0 ANGSTROMS RESOLUTION 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N A GLU 162 A GLU 162 HELX_P A TYR 167 A TYR 167 1 H1 6 A LEU 205 A LEU 205 HELX_P A LEU 209 A LEU 209 1 H2 5 covale 1.352 both A PCA 1 A C PCA 1 1_555 A ASN 2 A N ASN 2 1_555 covale 1.443 one N-Glycosylation A ASN 18 A ND2 ASN 18 1_555 C NAG 1 C C1 NAG 1_555 covale 1.428 one B MAG 1 B O3 MAG 1_555 B GAL 2 B C1 GAL 1_555 covale 1.458 one B MAG 1 B O4 MAG 1_555 B FUC 4 B C1 FUC 1_555 covale 1.411 one B GAL 2 B O2 GAL 1_555 B FUC 3 B C1 FUC 1_555 covale 1.427 one C NAG 1 C O3 NAG 1_555 C FUC 2 C C1 FUC 1_555 covale 1.419 both C NAG 1 C O4 NAG 1_555 C NAG 3 C C1 NAG 1_555 metalc 2.243 A GLU 129 A OE2 GLU 129 1_555 A MN 250 D MN MN 1_555 metalc 2.053 A ASP 131 A OD2 ASP 131 1_555 A MN 250 D MN MN 1_555 metalc 2.658 A ASP 131 A OD2 ASP 131 1_555 A CA 251 E CA CA 1_555 metalc 2.395 A ASP 131 A OD1 ASP 131 1_555 A CA 251 E CA CA 1_555 metalc 2.304 A TRP 133 A O TRP 133 1_555 A CA 251 E CA CA 1_555 metalc 2.467 A ASN 135 A OD1 ASN 135 1_555 A CA 251 E CA CA 1_555 metalc 2.376 A ASP 140 A OD1 ASP 140 1_555 A MN 250 D MN MN 1_555 metalc 2.287 A ASP 140 A OD2 ASP 140 1_555 A CA 251 E CA CA 1_555 metalc 2.218 A HIS 145 A NE2 HIS 145 1_555 A MN 250 D MN MN 1_555 metalc 2.057 A MN 250 D MN MN 1_555 A HOH 305 G O HOH 1_555 metalc 2.183 A MN 250 D MN MN 1_555 A HOH 332 G O HOH 1_555 metalc 2.210 A CA 251 E CA CA 1_555 A HOH 329 G O HOH 1_555 metalc 2.551 A CA 251 E CA CA 1_555 A HOH 333 G O HOH 1_555 LECTIN LECTIN A ALA 85 A ALA 85 1 A PRO 86 A PRO 86 -6.36 A ALA 88 A ALA 88 1 A ASP 89 A ASP 89 1.48 A VAL 221 A VAL 221 1 A GLY 222 A GLY 222 1.00 LEC4_GRISI UNP 1 1 P24146 QNTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR WENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFSTLDG TNK 2 243 1LED 2 243 P24146 A 1 2 243 6 7 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 4 A VAL 4 A TYR 8 A TYR 8 A TRP 232 A TRP 232 A THR 237 A THR 237 A SER 71 A SER 71 A PHE 78 A PHE 78 A ALA 172 A ALA 172 A ASP 179 A ASP 179 A LYS 183 A LYS 183 A TYR 191 A TYR 191 A ARG 195 A ARG 195 A VAL 203 A VAL 203 A THR 23 A THR 23 A LEU 25 A LEU 25 A SER 50 A SER 50 A TYR 56 A TYR 56 A ARG 214 A ARG 214 A VAL 221 A VAL 221 A GLY 90 A GLY 90 A ALA 96 A ALA 96 A VAL 125 A VAL 125 A ASP 131 A ASP 131 A HIS 145 A HIS 145 A ASN 151 A ASN 151 A ALA 157 A ALA 157 A THR 159 A THR 159 A THR 29 A THR 29 A ILE 31 A ILE 31 A ALA 34 A ALA 34 A LEU 37 A LEU 37 A ASP 224 A ASP 224 A ILE 229 A ILE 229 A LEU 79 A LEU 79 A TYR 83 A TYR 83 Unknown 12 Unknown 6 Unknown 6 A ARG 48 A ARG 48 12 1_555 A SER 49 A SER 49 12 1_555 A ASP 89 A ASP 89 12 1_555 A TYR 105 A TYR 105 12 1_555 A GLY 107 A GLY 107 12 1_555 A PHE 108 A PHE 108 12 1_555 A HIS 114 A HIS 114 12 1_555 A TRP 133 A TRP 133 12 1_555 A ASN 135 A ASN 135 12 1_555 A TRP 138 A TRP 138 12 1_555 A GLY 222 A GLY 222 12 1_555 A TYR 223 A TYR 223 12 1_555 A GLU 129 A GLU 129 6 1_555 A ASP 131 A ASP 131 6 1_555 A ASP 140 A ASP 140 6 1_555 A HIS 145 A HIS 145 6 1_555 A HOH 305 G HOH 6 1_555 A HOH 332 G HOH 6 1_555 A ASP 131 A ASP 131 6 1_555 A TRP 133 A TRP 133 6 1_555 A ASN 135 A ASN 135 6 1_555 A ASP 140 A ASP 140 6 1_555 A HOH 329 G HOH 6 1_555 A HOH 333 G HOH 6 1_555 94 P 42 21 2