0.007292 0.000000 0.000000 0.000000 0.005565 0.000000 0.000000 0.000000 0.010302 0.00000 0.00000 0.00000 Chen-Park, F. Huang, D.B. Ghosh, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 137.131 179.697 97.068 C9 H12 I N2 O8 P 434.078 n 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N O N 8 N O N 9 N I N 10 R C N 11 N C N 12 S C N 13 R C N 14 N O N 15 N O N 16 N C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N N N 35 S C N 36 N C N 37 N O N 38 N C N 39 N O N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N N N 48 S C N 49 N C N 50 N O N 51 N C N 52 N C N 53 N C N 54 N N N 55 N C N 56 N N N 57 N N N 58 N O N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N O N 81 N N N 82 N O N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N O N 98 N O N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 R C N 109 N C N 110 N O N 111 N C N 112 N S N 113 N O N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N O N 122 N P N 123 N O N 124 N O N 125 N O N 126 N C N 127 R C N 128 N O N 129 S C N 130 N O N 131 N C N 132 R C Y 133 N N Y 134 N C Y 135 N N Y 136 N C Y 137 N C N 138 N N Y 139 N N Y 140 N C Y 141 N N Y 142 N C N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N O N 158 N P N 159 N O N 160 N O N 161 N O N 162 N C N 163 R C N 164 N O N 165 S C N 166 N O N 167 N C N 168 R C N 169 N N N 170 N C N 171 N O N 172 N N N 173 N C N 174 N N N 175 N C N 176 N C N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N O N 192 N P N 193 N O N 194 N O N 195 N O N 196 N C N 197 R C N 198 N O N 199 S C N 200 N O N 201 N C N 202 R C Y 203 N N Y 204 N C Y 205 N N Y 206 N C N 207 N C N 208 N O N 209 N N N 210 N C N 211 N N N 212 N N Y 213 N C N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N O N 229 N P N 230 N O N 231 N O N 232 N O N 233 N C N 234 R C N 235 N O N 236 S C N 237 N O N 238 N C N 239 R C N 240 N N N 241 N C N 242 N O N 243 N N N 244 N C N 245 N O N 246 N C N 247 N C N 248 N C N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C N 269 N C N 270 N C N 271 N O N 272 N N N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C N 289 N C N 290 N C N 291 N O N 292 N O N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N N N 304 N C N 305 N C N 306 N O N 307 N O N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C Y 318 N C Y 319 N N Y 320 N C Y 321 N C Y 322 N N N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N O N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 S C N 342 N C N 343 N C N 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C N 386 N C N 387 N C N 388 N C N 389 N N N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C N 411 N C N 412 N S N 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N C N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N N N 450 S C N 451 N C N 452 N O N 453 N C N 454 N C N 455 N C N 456 N O N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N N N 467 S C N 468 N C N 469 N O N 470 N C N 471 N O N 472 N O N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N N N 481 S C N 482 N C N 483 N O N 484 R C N 485 N O N 486 N C N 487 N O N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N N N 498 S C N 499 N C N 500 N O N 501 N C Y 502 N C Y 503 N C Y 504 N C Y 505 N N Y 506 N C Y 507 N C Y 508 N C Y 509 N C Y 510 N C N 511 N O N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N N N 525 S C N 526 N C N 527 N O N 528 N C Y 529 N C Y 530 N C Y 531 N C Y 532 N C Y 533 N C Y 534 N C N 535 N O N 536 N O N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N N N 549 S C N 550 N C N 551 N O N 552 N C N 553 N C N 554 N C N 555 N O N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N doub N 10 N doub N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N sing Y 142 N doub N 143 N sing Y 144 N sing Y 145 N sing Y 146 N doub N 147 N sing Y 148 N doub N 149 N sing N 150 N sing Y 151 N sing Y 152 N doub N 153 N sing Y 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing Y 213 N sing Y 214 N sing Y 215 N doub N 216 N sing Y 217 N sing N 218 N sing Y 219 N doub N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N doub N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing Y 323 N sing Y 324 N doub Y 325 N doub N 326 N sing Y 327 N sing N 328 N sing Y 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N doub N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N doub N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N doub N 427 N sing N 428 N sing N 429 N sing N 430 N sing Y 431 N doub Y 432 N sing Y 433 N sing N 434 N sing Y 435 N doub N 436 N sing Y 437 N doub N 438 N sing Y 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N doub N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N doub N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N doub N 496 N sing N 497 N sing N 498 N sing N 499 N sing Y 500 N doub Y 501 N sing Y 502 N sing N 503 N sing Y 504 N doub Y 505 N sing Y 506 N sing N 507 N sing Y 508 N sing Y 509 N doub N 510 N sing Y 511 N doub N 512 N sing Y 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N doub N 524 N sing N 525 N sing N 526 N sing N 527 N sing Y 528 N doub Y 529 N sing Y 530 N sing N 531 N sing Y 532 N doub N 533 N sing Y 534 N doub N 535 N sing Y 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N sing N 545 N sing N 546 N sing N 547 N doub N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 277 24701 24708 10.1074/jbc.M200007200 11970949 The kB DNA sequence from the HIV Long Terminal Repeat functions as an allosteric regulator of HIV transcription 2002 10.2210/pdb1lei/pdb pdb_00001lei 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 IMAGE PLATE 1999-08-08 MARRESEARCH MIRRORS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 kB DNA 5269.450 5'-D(*CP*TP*CP*AP*GP*GP*GP*AP*AP*AP*GP*TP*AP*CP*AP*GP*A)-3' 1 syn polymer kB DNA 5591.812 5'-D(*TP*CP*TP*GP*5ITP*AP*CP*5ITP*5ITP*5ITP*CP*CP*CP*TP*GP*AP*G)-3' 1 syn polymer 31115.236 NUCLEAR FACTOR NF-KAPPA-B P65 SUBUNIT p65 RHR 1 man polymer 35056.066 NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT p50 RHR 1 man polymer 18.015 water 23 nat water NF-kB p65 NF-kB p50 no no (DC)(DT)(DC)(DA)(DG)(DG)(DG)(DA)(DA)(DA)(DG)(DT)(DA)(DC)(DA)(DG)(DA) CTCAGGGAAAGTACAGA C polydeoxyribonucleotide no yes (DT)(DC)(DT)(DG)(5IU)(DA)(DC)(5IU)(5IU)(5IU)(DC)(DC)(DC)(DT)(DG)(DA)(DG) TCTGUACUUUCCCTGAG D polydeoxyribonucleotide no no MAYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRD GYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTP VLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPY ADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD MAYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRD GYYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTP VLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPY ADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD A polypeptide(L) no no MGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCE DGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQA AVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDD IQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE MGPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCE DGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQA AVQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDD IQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample rela 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21(DE3) t7 promoter ET29b house mouse Mus Escherichia Escherichia coli sample nfkb1 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21(DE3) t7 promoter ET29b 1 3.86 68.13 SMALL TUBES 6.5 PEG 3350, CaCl2, sodium spermine, pH 6.5, SMALL TUBES, temperature 291K 291 PEG 3350 1 CaCl2 1 sodium spermine 1 CaCl2 2 -1.062 1 19 C 1 D 17 4.426 C_DC1:DG17_D 1 9.689 0.160 0.426 -0.035 27.327 1 20 C 2 D 16 -14.598 C_DT2:DA16_D 2 -25.824 -0.137 0.279 -0.052 19.391 1 19 C 3 D 15 3.987 C_DC3:DG15_D 3 -20.945 0.141 -0.239 0.025 -3.080 1 20 C 4 D 14 -10.994 C_DA4:DT14_D 4 -30.541 0.208 0.164 0.103 -1.180 1 19 C 5 D 13 1.313 C_DG5:DC13_D 5 -21.146 -0.135 0.318 -0.137 18.176 1 19 C 6 D 12 -2.451 C_DG6:DC12_D 6 6.968 -0.065 1.040 -0.089 21.259 1 19 C 7 D 11 1.767 C_DG7:DC11_D 7 -9.967 -0.188 0.623 0.038 15.352 1 20 C 8 D 10 3.529 C_DA8:5IU10_D 8 -16.750 -0.119 0.530 -0.005 18.427 1 20 C 9 D 9 7.342 C_DA9:5IU9_D 9 -14.328 -0.323 0.780 -0.033 1.120 1 20 C 10 D 8 7.192 C_DA10:5IU8_D 10 -12.890 -0.453 0.763 -0.120 -3.281 1 19 C 11 D 7 -3.067 C_DG11:DC7_D 11 -24.244 -0.105 0.849 -0.189 -24.309 1 20 C 12 D 6 -2.606 C_DT12:DA6_D 12 -16.753 -0.278 0.852 -0.094 6.320 1 20 C 13 D 5 6.418 C_DA13:5IU5_D 13 -5.275 -0.145 1.642 -0.479 10.419 1 19 C 14 D 4 3.008 C_DC14:DG4_D 14 3.742 0.136 0.799 -0.056 29.804 1 20 C 15 D 3 0.282 C_DA15:DT3_D 15 -15.934 0.071 0.645 0.006 20.544 1 19 C 16 D 2 -5.124 C_DG16:DC2_D 16 -31.684 0.278 0.875 -0.195 -35.691 1 20 C 17 D 1 -89.263 C_DA17:DT1_D 17 -25.000 -0.614 -1.867 1.246 2.699 36.853 C C 1 2 -8.385 D D 17 16 2.688 -5.284 -2.205 -0.360 CC_DC1DT2:DA16DG17_DD 1 0.222 -0.352 36.485 0.023 3.513 3.812 32.914 C C 2 3 9.470 D D 16 15 3.747 5.288 0.808 0.187 CC_DT2DC3:DG15DA16_DD 2 8.255 -14.783 31.459 -0.738 0.240 3.951 44.188 C C 3 4 0.073 D D 15 14 3.849 0.054 -0.885 1.377 CC_DC3DA4:DT14DG15_DD 3 -10.252 13.742 43.040 1.824 0.016 2.661 28.198 C C 4 5 20.722 D D 14 13 3.303 9.827 0.653 -0.750 CC_DA4DG5:DC13DT14_DD 4 -5.399 11.384 25.914 -3.722 -2.540 2.571 52.314 C C 5 6 -36.271 D D 13 12 3.312 -30.096 0.384 0.168 CC_DG5DG6:DC12DC13_DD 5 -8.427 10.155 42.489 2.199 -0.998 3.490 33.518 C C 6 7 -8.931 D D 12 11 3.536 -5.118 -0.338 -0.414 CC_DG6DG7:DC11DC12_DD 6 4.201 -7.330 32.876 0.196 1.336 3.044 34.591 C C 7 8 4.921 D D 11 10 3.160 2.922 -0.092 -1.290 CC_DG7DA8:5IU10DC11_DD 7 -0.265 0.447 34.470 -2.598 0.117 3.079 32.253 C C 8 9 -15.031 D D 10 9 3.025 -8.254 0.569 -0.804 CC_DA8DA9:5IU95IU10_DD 8 -2.485 4.525 31.109 -0.051 -1.443 3.619 39.025 C C 9 10 5.603 D D 9 8 3.589 3.701 -0.789 -0.419 CC_DA9DA10:5IU85IU9_DD 9 -9.708 14.697 37.668 -1.129 -0.135 3.552 34.686 C C 10 11 -9.803 D D 8 7 3.384 -5.811 -0.768 -0.979 CC_DA10DG11:DC75IU8_DD 10 -3.148 5.310 34.070 -0.688 0.772 3.982 40.233 C C 11 12 -12.344 D D 7 6 3.775 -8.433 -0.415 -1.385 CC_DG11DT12:DA6DC7_DD 11 -0.586 0.858 39.371 -0.866 0.524 2.340 30.389 C C 12 13 -13.739 D D 6 5 2.278 -7.078 0.215 -0.995 CC_DT12DA13:5IU5DA6_DD 12 -6.832 13.261 28.788 -0.868 -1.405 3.115 25.636 C C 13 14 -3.087 D D 5 4 3.166 -1.367 -0.765 -0.612 CC_DA13DC14:DG45IU5_DD 13 2.260 -5.102 25.502 -1.007 2.340 2.685 36.463 C C 14 15 1.864 D D 4 3 2.680 1.166 -0.694 -0.264 CC_DC14DA15:DT3DG4_DD 14 -0.787 1.258 36.437 -0.554 1.019 3.724 33.279 C C 15 16 5.223 D D 3 2 3.489 2.955 -1.408 0.066 CC_DA15DG16:DC2DT3_DD 15 -8.662 15.311 32.030 -0.440 0.833 2.974 69.751 C C 16 17 8.859 D D 2 1 3.468 10.006 -1.383 -0.274 CC_DG16DA17:DT1DC2_DD 16 18.835 -16.675 66.807 -0.603 1.894 database_2 struct_conn struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2003-04-15 1 1 2008-04-28 1 2 2011-07-13 1 3 2022-12-21 1 4 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details 1VKX contains the same protein complexed with a kB DNA RCSB Y RCSB 2002-04-09 REL HOH water 1VKX PDB ENTRY 1VKX PDB experimental model HOH 700 5 HOH HOH 700 A HOH 701 5 HOH HOH 701 A HOH 702 5 HOH HOH 702 A HOH 706 5 HOH HOH 706 A HOH 707 5 HOH HOH 707 A HOH 709 5 HOH HOH 709 A HOH 711 5 HOH HOH 711 A HOH 712 5 HOH HOH 712 A HOH 714 5 HOH HOH 714 A HOH 715 5 HOH HOH 715 A HOH 716 5 HOH HOH 716 A HOH 719 5 HOH HOH 719 A HOH 720 5 HOH HOH 720 A HOH 721 5 HOH HOH 721 A HOH 722 5 HOH HOH 722 A HOH 703 5 HOH HOH 703 B HOH 704 5 HOH HOH 704 B HOH 705 5 HOH HOH 705 B HOH 708 5 HOH HOH 708 B HOH 710 5 HOH HOH 710 B HOH 713 5 HOH HOH 713 B HOH 717 5 HOH HOH 717 B HOH 718 5 HOH HOH 718 B C 1 n 1 DC 1 C T 2 n 2 DT 2 C C 3 n 3 DC 3 C A 4 n 4 DA 4 C G 5 n 5 DG 5 C G 6 n 6 DG 6 C G 7 n 7 DG 7 C A 8 n 8 DA 8 C A 9 n 9 DA 9 C A 10 n 10 DA 10 C G 11 n 11 DG 11 C T 12 n 12 DT 12 C A 13 n 13 DA 13 C C 14 n 14 DC 14 C A 15 n 15 DA 15 C G 16 n 16 DG 16 C A 17 n 17 DA 17 C T 1 n 1 DT 1 D C 2 n 2 DC 2 D T 3 n 3 DT 3 D G 4 n 4 DG 4 D 5IT 5 n 5 5IU 5 D A 6 n 6 DA 6 D C 7 n 7 DC 7 D 5IT 8 n 8 5IU 8 D 5IT 9 n 9 5IU 9 D 5IT 10 n 10 5IU 10 D C 11 n 11 DC 11 D C 12 n 12 DC 12 D C 13 n 13 DC 13 D T 14 n 14 DT 14 D G 15 n 15 DG 15 D A 16 n 16 DA 16 D G 17 n 17 DG 17 D n 1 18 A ALA 19 n 2 ALA 19 A TYR 20 n 3 TYR 20 A VAL 21 n 4 VAL 21 A GLU 22 n 5 GLU 22 A ILE 23 n 6 ILE 23 A ILE 24 n 7 ILE 24 A GLU 25 n 8 GLU 25 A GLN 26 n 9 GLN 26 A PRO 27 n 10 PRO 27 A LYS 28 n 11 LYS 28 A GLN 29 n 12 GLN 29 A ARG 30 n 13 ARG 30 A GLY 31 n 14 GLY 31 A MET 32 n 15 MET 32 A ARG 33 n 16 ARG 33 A PHE 34 n 17 PHE 34 A ARG 35 n 18 ARG 35 A TYR 36 n 19 TYR 36 A LYS 37 n 20 LYS 37 A CYS 38 n 21 CYS 38 A GLU 39 n 22 GLU 39 A GLY 40 n 23 GLY 40 A ARG 41 n 24 ARG 41 A SER 42 n 25 SER 42 A ALA 43 n 26 ALA 43 A GLY 44 n 27 GLY 44 A SER 45 n 28 SER 45 A ILE 46 n 29 ILE 46 A PRO 47 n 30 PRO 47 A GLY 48 n 31 GLY 48 A GLU 49 n 32 GLU 49 A ARG 50 n 33 ARG 50 A SER 51 n 34 SER 51 A THR 52 n 35 THR 52 A ASP 53 n 36 ASP 53 A THR 54 n 37 THR 54 A THR 55 n 38 THR 55 A LYS 56 n 39 LYS 56 A THR 57 n 40 THR 57 A HIS 58 n 41 HIS 58 A PRO 59 n 42 PRO 59 A THR 60 n 43 THR 60 A ILE 61 n 44 ILE 61 A LYS 62 n 45 LYS 62 A ILE 63 n 46 ILE 63 A ASN 64 n 47 ASN 64 A GLY 65 n 48 GLY 65 A TYR 66 n 49 TYR 66 A THR 67 n 50 THR 67 A GLY 68 n 51 GLY 68 A PRO 69 n 52 PRO 69 A GLY 70 n 53 GLY 70 A THR 71 n 54 THR 71 A VAL 72 n 55 VAL 72 A ARG 73 n 56 ARG 73 A ILE 74 n 57 ILE 74 A SER 75 n 58 SER 75 A LEU 76 n 59 LEU 76 A VAL 77 n 60 VAL 77 A THR 78 n 61 THR 78 A LYS 79 n 62 LYS 79 A ASP 80 n 63 ASP 80 A PRO 81 n 64 PRO 81 A PRO 82 n 65 PRO 82 A HIS 83 n 66 HIS 83 A ARG 84 n 67 ARG 84 A PRO 85 n 68 PRO 85 A HIS 86 n 69 HIS 86 A PRO 87 n 70 PRO 87 A HIS 88 n 71 HIS 88 A GLU 89 n 72 GLU 89 A LEU 90 n 73 LEU 90 A VAL 91 n 74 VAL 91 A GLY 92 n 75 GLY 92 A LYS 93 n 76 LYS 93 A ASP 94 n 77 ASP 94 A CYS 95 n 78 CYS 95 A ARG 96 n 79 ARG 96 A ASP 97 n 80 ASP 97 A GLY 98 n 81 GLY 98 A TYR 99 n 82 TYR 99 A TYR 100 n 83 TYR 100 A GLU 101 n 84 GLU 101 A ALA 102 n 85 ALA 102 A ASP 103 n 86 ASP 103 A LEU 104 n 87 LEU 104 A CYS 105 n 88 CYS 105 A PRO 106 n 89 PRO 106 A ASP 107 n 90 ASP 107 A ARG 108 n 91 ARG 108 A SER 109 n 92 SER 109 A ILE 110 n 93 ILE 110 A HIS 111 n 94 HIS 111 A SER 112 n 95 SER 112 A PHE 113 n 96 PHE 113 A GLN 114 n 97 GLN 114 A ASN 115 n 98 ASN 115 A LEU 116 n 99 LEU 116 A GLY 117 n 100 GLY 117 A ILE 118 n 101 ILE 118 A GLN 119 n 102 GLN 119 A CYS 120 n 103 CYS 120 A VAL 121 n 104 VAL 121 A LYS 122 n 105 LYS 122 A LYS 123 n 106 LYS 123 A ARG 124 n 107 ARG 124 A ASP 125 n 108 ASP 125 A LEU 126 n 109 LEU 126 A GLU 127 n 110 GLU 127 A GLN 128 n 111 GLN 128 A ALA 129 n 112 ALA 129 A ILE 130 n 113 ILE 130 A SER 131 n 114 SER 131 A GLN 132 n 115 GLN 132 A ARG 133 n 116 ARG 133 A ILE 134 n 117 ILE 134 A GLN 135 n 118 GLN 135 A THR 136 n 119 THR 136 A ASN 137 n 120 ASN 137 A ASN 138 n 121 ASN 138 A ASN 139 n 122 ASN 139 A PRO 140 n 123 PRO 140 A PHE 141 n 124 PHE 141 A HIS 142 n 125 HIS 142 A VAL 143 n 126 VAL 143 A PRO 144 n 127 PRO 144 A ILE 145 n 128 ILE 145 A GLU 146 n 129 GLU 146 A GLU 147 n 130 GLU 147 A GLN 148 n 131 GLN 148 A ARG 149 n 132 ARG 149 A GLY 150 n 133 GLY 150 A ASP 151 n 134 ASP 151 A TYR 152 n 135 TYR 152 A ASP 153 n 136 ASP 153 A LEU 154 n 137 LEU 154 A ASN 155 n 138 ASN 155 A ALA 156 n 139 ALA 156 A VAL 157 n 140 VAL 157 A ARG 158 n 141 ARG 158 A LEU 159 n 142 LEU 159 A CYS 160 n 143 CYS 160 A PHE 161 n 144 PHE 161 A GLN 162 n 145 GLN 162 A VAL 163 n 146 VAL 163 A THR 164 n 147 THR 164 A VAL 165 n 148 VAL 165 A ARG 166 n 149 ARG 166 A ASP 167 n 150 ASP 167 A PRO 168 n 151 PRO 168 A ALA 169 n 152 ALA 169 A GLY 170 n 153 GLY 170 A ARG 171 n 154 ARG 171 A PRO 172 n 155 PRO 172 A LEU 173 n 156 LEU 173 A LEU 174 n 157 LEU 174 A LEU 175 n 158 LEU 175 A THR 176 n 159 THR 176 A PRO 177 n 160 PRO 177 A VAL 178 n 161 VAL 178 A LEU 179 n 162 LEU 179 A SER 180 n 163 SER 180 A HIS 181 n 164 HIS 181 A PRO 182 n 165 PRO 182 A ILE 183 n 166 ILE 183 A PHE 184 n 167 PHE 184 A ASP 185 n 168 ASP 185 A ASN 186 n 169 ASN 186 A ARG 187 n 170 ARG 187 A ALA 188 n 171 ALA 188 A PRO 189 n 172 PRO 189 A ASN 190 n 173 ASN 190 A THR 191 n 174 THR 191 A ALA 192 n 175 ALA 192 A GLU 193 n 176 GLU 193 A LEU 194 n 177 LEU 194 A LYS 195 n 178 LYS 195 A ILE 196 n 179 ILE 196 A CYS 197 n 180 CYS 197 A ARG 198 n 181 ARG 198 A VAL 199 n 182 VAL 199 A ASN 200 n 183 ASN 200 A ARG 201 n 184 ARG 201 A ASN 202 n 185 ASN 202 A SER 203 n 186 SER 203 A GLY 204 n 187 GLY 204 A SER 205 n 188 SER 205 A CYS 206 n 189 CYS 206 A LEU 207 n 190 LEU 207 A GLY 208 n 191 GLY 208 A GLY 209 n 192 GLY 209 A ASP 210 n 193 ASP 210 A GLU 211 n 194 GLU 211 A ILE 212 n 195 ILE 212 A PHE 213 n 196 PHE 213 A LEU 214 n 197 LEU 214 A LEU 215 n 198 LEU 215 A CYS 216 n 199 CYS 216 A ASP 217 n 200 ASP 217 A LYS 218 n 201 LYS 218 A VAL 219 n 202 VAL 219 A GLN 220 n 203 GLN 220 A LYS 221 n 204 LYS 221 A GLU 222 n 205 GLU 222 A ASP 223 n 206 ASP 223 A ILE 224 n 207 ILE 224 A GLU 225 n 208 GLU 225 A VAL 226 n 209 VAL 226 A TYR 227 n 210 TYR 227 A PHE 228 n 211 PHE 228 A THR 229 n 212 THR 229 A GLY 230 n 213 GLY 230 A PRO 231 n 214 PRO 231 A GLY 232 n 215 GLY 232 A TRP 233 n 216 TRP 233 A GLU 234 n 217 GLU 234 A ALA 235 n 218 ALA 235 A ARG 236 n 219 ARG 236 A GLY 237 n 220 GLY 237 A SER 238 n 221 SER 238 A PHE 239 n 222 PHE 239 A SER 240 n 223 SER 240 A GLN 241 n 224 GLN 241 A ALA 242 n 225 ALA 242 A ASP 243 n 226 ASP 243 A VAL 244 n 227 VAL 244 A HIS 245 n 228 HIS 245 A ARG 246 n 229 ARG 246 A GLN 247 n 230 GLN 247 A VAL 248 n 231 VAL 248 A ALA 249 n 232 ALA 249 A ILE 250 n 233 ILE 250 A VAL 251 n 234 VAL 251 A PHE 252 n 235 PHE 252 A ARG 253 n 236 ARG 253 A THR 254 n 237 THR 254 A PRO 255 n 238 PRO 255 A PRO 256 n 239 PRO 256 A TYR 257 n 240 TYR 257 A ALA 258 n 241 ALA 258 A ASP 259 n 242 ASP 259 A PRO 260 n 243 PRO 260 A SER 261 n 244 SER 261 A LEU 262 n 245 LEU 262 A GLN 263 n 246 GLN 263 A ALA 264 n 247 ALA 264 A PRO 265 n 248 PRO 265 A VAL 266 n 249 VAL 266 A ARG 267 n 250 ARG 267 A VAL 268 n 251 VAL 268 A SER 269 n 252 SER 269 A MET 270 n 253 MET 270 A GLN 271 n 254 GLN 271 A LEU 272 n 255 LEU 272 A ARG 273 n 256 ARG 273 A ARG 274 n 257 ARG 274 A PRO 275 n 258 PRO 275 A SER 276 n 259 SER 276 A ASP 277 n 260 ASP 277 A ARG 278 n 261 ARG 278 A GLU 279 n 262 GLU 279 A LEU 280 n 263 LEU 280 A SER 281 n 264 SER 281 A GLU 282 n 265 GLU 282 A PRO 283 n 266 PRO 283 A MET 284 n 267 MET 284 A GLU 285 n 268 GLU 285 A PHE 286 n 269 PHE 286 A GLN 287 n 270 GLN 287 A TYR 288 n 271 TYR 288 A LEU 289 n 272 LEU 289 A PRO 290 n 273 PRO 290 A ASP 291 n 274 ASP 291 A n 1 38 B GLY 339 n 2 GLY 39 B PRO 340 n 3 PRO 40 B TYR 341 n 4 TYR 41 B LEU 342 n 5 LEU 42 B GLN 343 n 6 GLN 43 B ILE 344 n 7 ILE 44 B LEU 345 n 8 LEU 45 B GLU 346 n 9 GLU 46 B GLN 347 n 10 GLN 47 B PRO 348 n 11 PRO 48 B LYS 349 n 12 LYS 49 B GLN 350 n 13 GLN 50 B ARG 351 n 14 ARG 51 B GLY 352 n 15 GLY 52 B PHE 353 n 16 PHE 53 B ARG 354 n 17 ARG 54 B PHE 355 n 18 PHE 55 B ARG 356 n 19 ARG 56 B TYR 357 n 20 TYR 57 B VAL 358 n 21 VAL 58 B CYS 359 n 22 CYS 59 B GLU 360 n 23 GLU 60 B GLY 361 n 24 GLY 61 B PRO 362 n 25 PRO 62 B SER 363 n 26 SER 63 B HIS 364 n 27 HIS 64 B GLY 365 n 28 GLY 65 B GLY 366 n 29 GLY 66 B LEU 367 n 30 LEU 67 B PRO 368 n 31 PRO 68 B GLY 369 n 32 GLY 69 B ALA 370 n 33 ALA 70 B SER 371 n 34 SER 71 B SER 372 n 35 SER 72 B GLU 373 n 36 GLU 73 B LYS 374 n 37 LYS 74 B ASN 375 n 38 ASN 75 B LYS 376 n 39 LYS 76 B LYS 377 n 40 LYS 77 B SER 378 n 41 SER 78 B TYR 379 n 42 TYR 79 B PRO 380 n 43 PRO 80 B GLN 381 n 44 GLN 81 B VAL 382 n 45 VAL 82 B LYS 383 n 46 LYS 83 B ILE 384 n 47 ILE 84 B CYS 385 n 48 CYS 85 B ASN 386 n 49 ASN 86 B TYR 387 n 50 TYR 87 B VAL 388 n 51 VAL 88 B GLY 389 n 52 GLY 89 B PRO 390 n 53 PRO 90 B ALA 391 n 54 ALA 91 B LYS 392 n 55 LYS 92 B VAL 393 n 56 VAL 93 B ILE 394 n 57 ILE 94 B VAL 395 n 58 VAL 95 B GLN 396 n 59 GLN 96 B LEU 397 n 60 LEU 97 B VAL 398 n 61 VAL 98 B THR 399 n 62 THR 99 B ASN 400 n 63 ASN 100 B GLY 401 n 64 GLY 101 B LYS 402 n 65 LYS 102 B ASN 403 n 66 ASN 103 B ILE 404 n 67 ILE 104 B HIS 405 n 68 HIS 105 B LEU 406 n 69 LEU 106 B HIS 407 n 70 HIS 107 B ALA 408 n 71 ALA 108 B HIS 409 n 72 HIS 109 B SER 410 n 73 SER 110 B LEU 411 n 74 LEU 111 B VAL 412 n 75 VAL 112 B GLY 413 n 76 GLY 113 B LYS 414 n 77 LYS 114 B HIS 415 n 78 HIS 115 B CYS 416 n 79 CYS 116 B GLU 417 n 80 GLU 117 B ASP 418 n 81 ASP 118 B GLY 419 n 82 GLY 119 B VAL 420 n 83 VAL 120 B CYS 421 n 84 CYS 121 B THR 422 n 85 THR 122 B VAL 423 n 86 VAL 123 B THR 424 n 87 THR 124 B ALA 425 n 88 ALA 125 B GLY 426 n 89 GLY 126 B PRO 427 n 90 PRO 127 B LYS 428 n 91 LYS 128 B ASP 429 n 92 ASP 129 B MET 430 n 93 MET 130 B VAL 431 n 94 VAL 131 B VAL 432 n 95 VAL 132 B GLY 433 n 96 GLY 133 B PHE 434 n 97 PHE 134 B ALA 435 n 98 ALA 135 B ASN 436 n 99 ASN 136 B LEU 437 n 100 LEU 137 B GLY 438 n 101 GLY 138 B ILE 439 n 102 ILE 139 B LEU 440 n 103 LEU 140 B HIS 441 n 104 HIS 141 B VAL 442 n 105 VAL 142 B THR 443 n 106 THR 143 B LYS 444 n 107 LYS 144 B LYS 445 n 108 LYS 145 B LYS 446 n 109 LYS 146 B VAL 447 n 110 VAL 147 B PHE 448 n 111 PHE 148 B GLU 449 n 112 GLU 149 B THR 450 n 113 THR 150 B LEU 451 n 114 LEU 151 B GLU 452 n 115 GLU 152 B ALA 453 n 116 ALA 153 B ARG 454 n 117 ARG 154 B MET 455 n 118 MET 155 B THR 456 n 119 THR 156 B GLU 457 n 120 GLU 157 B ALA 458 n 121 ALA 158 B CYS 459 n 122 CYS 159 B ILE 460 n 123 ILE 160 B ARG 461 n 124 ARG 161 B GLY 462 n 125 GLY 162 B TYR 463 n 126 TYR 163 B ASN 464 n 127 ASN 164 B PRO 465 n 128 PRO 165 B GLY 466 n 129 GLY 166 B LEU 467 n 130 LEU 167 B LEU 468 n 131 LEU 168 B VAL 469 n 132 VAL 169 B HIS 470 n 133 HIS 170 B SER 471 n 134 SER 171 B ASP 472 n 135 ASP 172 B LEU 473 n 136 LEU 173 B ALA 474 n 137 ALA 174 B TYR 475 n 138 TYR 175 B LEU 476 n 139 LEU 176 B GLN 477 n 140 GLN 177 B ALA 478 n 141 ALA 178 B GLU 479 n 142 GLU 179 B GLY 480 n 143 GLY 180 B GLY 481 n 144 GLY 181 B GLY 482 n 145 GLY 182 B ASP 483 n 146 ASP 183 B ARG 484 n 147 ARG 184 B GLN 485 n 148 GLN 185 B LEU 486 n 149 LEU 186 B THR 487 n 150 THR 187 B ASP 488 n 151 ASP 188 B ARG 489 n 152 ARG 189 B GLU 490 n 153 GLU 190 B LYS 491 n 154 LYS 191 B GLU 492 n 155 GLU 192 B ILE 493 n 156 ILE 193 B ILE 494 n 157 ILE 194 B ARG 495 n 158 ARG 195 B GLN 496 n 159 GLN 196 B ALA 497 n 160 ALA 197 B ALA 498 n 161 ALA 198 B VAL 499 n 162 VAL 199 B GLN 500 n 163 GLN 200 B GLN 501 n 164 GLN 201 B THR 502 n 165 THR 202 B LYS 503 n 166 LYS 203 B GLU 504 n 167 GLU 204 B MET 505 n 168 MET 205 B ASP 506 n 169 ASP 206 B LEU 507 n 170 LEU 207 B SER 508 n 171 SER 208 B VAL 509 n 172 VAL 209 B VAL 510 n 173 VAL 210 B ARG 511 n 174 ARG 211 B LEU 512 n 175 LEU 212 B MET 513 n 176 MET 213 B PHE 514 n 177 PHE 214 B THR 515 n 178 THR 215 B ALA 516 n 179 ALA 216 B PHE 517 n 180 PHE 217 B LEU 518 n 181 LEU 218 B PRO 519 n 182 PRO 219 B ASP 520 n 183 ASP 220 B SER 521 n 184 SER 221 B THR 522 n 185 THR 222 B GLY 523 n 186 GLY 223 B SER 524 n 187 SER 224 B PHE 525 n 188 PHE 225 B THR 526 n 189 THR 226 B ARG 527 n 190 ARG 227 B ARG 528 n 191 ARG 228 B LEU 529 n 192 LEU 229 B GLU 530 n 193 GLU 230 B PRO 531 n 194 PRO 231 B VAL 532 n 195 VAL 232 B VAL 533 n 196 VAL 233 B SER 534 n 197 SER 234 B ASP 535 n 198 ASP 235 B ALA 536 n 199 ALA 236 B ILE 537 n 200 ILE 237 B TYR 538 n 201 TYR 238 B ASP 539 n 202 ASP 239 B SER 540 n 203 SER 240 B LYS 541 n 204 LYS 241 B ALA 542 n 205 ALA 242 B PRO 543 n 206 PRO 243 B ASN 544 n 207 ASN 244 B ALA 545 n 208 ALA 245 B SER 546 n 209 SER 246 B ASN 547 n 210 ASN 247 B LEU 548 n 211 LEU 248 B LYS 549 n 212 LYS 249 B ILE 550 n 213 ILE 250 B VAL 551 n 214 VAL 251 B ARG 552 n 215 ARG 252 B MET 553 n 216 MET 253 B ASP 554 n 217 ASP 254 B ARG 555 n 218 ARG 255 B THR 556 n 219 THR 256 B ALA 557 n 220 ALA 257 B GLY 558 n 221 GLY 258 B CYS 559 n 222 CYS 259 B VAL 560 n 223 VAL 260 B THR 561 n 224 THR 261 B GLY 562 n 225 GLY 262 B GLY 563 n 226 GLY 263 B GLU 564 n 227 GLU 264 B GLU 565 n 228 GLU 265 B ILE 566 n 229 ILE 266 B TYR 567 n 230 TYR 267 B LEU 568 n 231 LEU 268 B LEU 569 n 232 LEU 269 B CYS 570 n 233 CYS 270 B ASP 571 n 234 ASP 271 B LYS 572 n 235 LYS 272 B VAL 573 n 236 VAL 273 B GLN 574 n 237 GLN 274 B LYS 575 n 238 LYS 275 B ASP 576 n 239 ASP 276 B ASP 577 n 240 ASP 277 B ILE 578 n 241 ILE 278 B GLN 579 n 242 GLN 279 B ILE 580 n 243 ILE 280 B ARG 581 n 244 ARG 281 B PHE 582 n 245 PHE 282 B TYR 583 n 246 TYR 283 B GLU 584 n 247 GLU 284 B GLU 585 n 248 GLU 285 B GLU 586 n 249 GLU 286 B GLU 587 n 250 GLU 287 B ASN 588 n 251 ASN 288 B GLY 589 n 252 GLY 289 B GLY 590 n 253 GLY 290 B VAL 591 n 254 VAL 291 B TRP 592 n 255 TRP 292 B GLU 593 n 256 GLU 293 B GLY 594 n 257 GLY 294 B PHE 595 n 258 PHE 295 B GLY 596 n 259 GLY 296 B ASP 597 n 260 ASP 297 B PHE 598 n 261 PHE 298 B SER 599 n 262 SER 299 B PRO 600 n 263 PRO 300 B THR 601 n 264 THR 301 B ASP 602 n 265 ASP 302 B VAL 603 n 266 VAL 303 B HIS 604 n 267 HIS 304 B ARG 605 n 268 ARG 305 B GLN 606 n 269 GLN 306 B PHE 607 n 270 PHE 307 B ALA 608 n 271 ALA 308 B ILE 609 n 272 ILE 309 B VAL 610 n 273 VAL 310 B PHE 611 n 274 PHE 311 B LYS 612 n 275 LYS 312 B THR 613 n 276 THR 313 B PRO 614 n 277 PRO 314 B LYS 615 n 278 LYS 315 B TYR 616 n 279 TYR 316 B LYS 617 n 280 LYS 317 B ASP 618 n 281 ASP 318 B VAL 619 n 282 VAL 319 B ASN 620 n 283 ASN 320 B ILE 621 n 284 ILE 321 B THR 622 n 285 THR 322 B LYS 623 n 286 LYS 323 B PRO 624 n 287 PRO 324 B ALA 625 n 288 ALA 325 B SER 626 n 289 SER 326 B VAL 627 n 290 VAL 327 B PHE 628 n 291 PHE 328 B VAL 629 n 292 VAL 329 B GLN 630 n 293 GLN 330 B LEU 631 n 294 LEU 331 B ARG 632 n 295 ARG 332 B ARG 633 n 296 ARG 333 B LYS 634 n 297 LYS 334 B SER 635 n 298 SER 335 B ASP 636 n 299 ASP 336 B LEU 637 n 300 LEU 337 B GLU 638 n 301 GLU 338 B THR 639 n 302 THR 339 B SER 640 n 303 SER 340 B GLU 641 n 304 GLU 341 B PRO 642 n 305 PRO 342 B LYS 643 n 306 LYS 343 B PRO 644 n 307 PRO 344 B PHE 645 n 308 PHE 345 B LEU 646 n 309 LEU 346 B TYR 647 n 310 TYR 347 B TYR 648 n 311 TYR 348 B PRO 649 n 312 PRO 349 B GLU 650 n 313 GLU 350 B author_defined_assembly 4 tetrameric D 5IU 5 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE B 5IU 5 DU D 5IU 8 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE B 5IU 8 DU D 5IU 9 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE B 5IU 9 DU D 5IU 10 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE B 5IU 10 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 22 C N GLU 5 A O LYS 62 C O LYS 45 A N ILE 61 C N ILE 44 A O HIS 111 C O HIS 94 A O ILE 183 C O ILE 166 A N VAL 157 C N VAL 140 A O THR 164 C O THR 147 A N THR 71 C N THR 54 A N VAL 72 C N VAL 55 A O ALA 102 C O ALA 85 A O TYR 99 C O TYR 82 A N ARG 96 C N ARG 79 A O ILE 183 C O ILE 166 A N VAL 157 C N VAL 140 A N VAL 165 C N VAL 148 A O LEU 173 C O LEU 156 A N GLU 89 C N GLU 72 A O GLN 119 C O GLN 102 A N ARG 198 C N ARG 181 A O LEU 215 C O LEU 198 A N ILE 212 C N ILE 195 A O PHE 252 C O PHE 235 A O ALA 249 C O ALA 232 A N HIS 245 C N HIS 228 A N GLY 204 C N GLY 187 A O LEU 289 C O LEU 272 A O PHE 286 C O PHE 269 A N VAL 268 C N VAL 251 A O GLN 271 C O GLN 254 A N TYR 227 C N TYR 210 A N GLY 230 C N GLY 213 A O TRP 233 C O TRP 216 A N GLY 204 C N GLY 187 A O LEU 289 C O LEU 272 A O PHE 286 C O PHE 269 A N VAL 268 C N VAL 251 A N ARG 274 C N ARG 257 A O GLU 279 C O GLU 262 B N GLN 43 D N GLN 6 B O LYS 83 D O LYS 46 B N VAL 82 D N VAL 45 B O VAL 132 D O VAL 95 B N ARG 56 D N ARG 19 B O HIS 141 D O HIS 104 B O LEU 140 D O LEU 103 B N SER 110 D N SER 73 B O ARG 227 D O ARG 190 B N LEU 218 D N LEU 181 B O PHE 217 D O PHE 180 B N LYS 92 D N LYS 55 B N VAL 95 D N VAL 58 B O CYS 121 D O CYS 84 B O VAL 120 D O VAL 83 B N GLU 117 D N GLU 80 B O ARG 227 D O ARG 190 B N LEU 218 D N LEU 181 B N VAL 210 D N VAL 173 B O ILE 237 D O ILE 200 B N ARG 252 D N ARG 215 B O LEU 269 D O LEU 232 B N LEU 268 D N LEU 231 B O ILE 309 D O ILE 272 B O ALA 308 D O ALA 271 B N HIS 304 D N HIS 267 B N GLY 258 D N GLY 221 B O LEU 346 D O LEU 309 B O LYS 343 D O LYS 306 B N VAL 329 D N VAL 292 B O PHE 328 D O PHE 291 B N TYR 283 D N TYR 246 B N PHE 282 D N PHE 245 B O GLY 294 D O GLY 257 1 A MET 18 C MET 1 1 Y 1 B MET 38 D MET 1 1 Y 1 2.02 0.30 108.30 110.32 D D D O4' C1' N1 DC DC DC 7 7 7 N 1 12.96 1.50 119.30 132.26 A A A C N CA ASP PRO PRO 80 81 81 Y 1 -10.14 1.50 119.30 109.16 A A A C N CA PRO PRO PRO 81 82 82 Y 1 D D O4 O4 DT DT 1 1 1.77 1_555 6_555 1 A GLU 25 -163.27 93.17 1 A ALA 43 -72.80 -165.73 1 A ILE 46 -50.90 109.57 1 A GLU 49 -166.82 -24.08 1 A THR 67 -171.46 117.87 1 A PRO 81 -13.65 -62.24 1 A HIS 83 -59.69 84.95 1 A ASN 115 -151.25 50.16 1 A GLN 135 -48.12 -16.24 1 A ASN 139 -150.53 76.58 1 A GLN 148 -76.69 25.33 1 A ASP 151 -37.17 148.07 1 A VAL 165 -108.19 -147.30 1 A ALA 169 -65.43 1.82 1 A ASP 223 -148.43 56.19 1 A PHE 239 179.80 163.71 1 A ARG 246 39.98 47.29 1 A GLN 247 61.69 -7.93 1 A SER 261 -141.94 55.76 1 A ALA 264 176.67 143.93 1 A ARG 278 39.24 34.84 1 B GLU 46 -155.10 84.18 1 B SER 63 39.61 91.89 1 B LEU 67 -24.05 114.72 1 B SER 72 -109.86 40.58 1 B GLU 73 -32.91 -35.97 1 B LYS 74 -134.83 -154.51 1 B ASN 75 -79.15 35.83 1 B LYS 77 20.52 72.48 1 B SER 78 -66.19 -169.28 1 B TYR 79 174.95 148.51 1 B TYR 87 -30.74 87.84 1 B LYS 114 18.33 -153.51 1 B PRO 127 -40.10 -168.52 1 B PHE 134 -150.51 81.26 1 B ASN 136 57.02 107.32 1 B LEU 137 -179.10 90.27 1 B GLU 149 -58.17 -71.11 1 B TYR 163 -38.02 -15.72 1 B PRO 165 -58.81 -158.97 1 B HIS 170 165.33 124.61 1 B ASP 172 -59.96 11.68 1 B TYR 175 -69.71 60.29 1 B LEU 176 -159.79 2.73 1 B GLN 177 -42.35 161.22 1 B ALA 178 -25.82 109.79 1 B GLU 179 -162.89 105.77 1 B ASP 220 -100.34 -145.75 1 B PHE 225 -55.12 77.35 1 B GLU 230 -39.37 119.41 1 B LYS 241 -152.77 -28.25 1 B PRO 243 -31.82 -21.17 1 B ALA 245 -165.17 7.70 1 B LYS 275 -43.30 -12.87 1 B GLU 286 -74.47 -169.41 1 B ASN 288 -78.50 43.15 1 B PHE 298 -176.38 146.68 1 B ARG 305 35.18 42.53 1 B GLN 306 61.35 -2.60 0.284 0.25 2.7 20.0 1525 29985 87.1 RANDOM 1 Isotropic 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1VKX Engh & Huber 2.7 20.0 23 5344 0 691 4630 1.33 0.007 2.7 30.0 1LEI 33470 0 1 0.064 1 13.8 7.6 98 0.31 2.7 2.8 2.5 89 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS The kB DNA sequence from the HLV-LTR functions as an allosteric regulator of HIV transcription 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N A LYS 122 C LYS 105 HELX_P A ARG 124 C ARG 107 5 1 3 A ASP 125 C ASP 108 HELX_P A GLN 135 C GLN 118 1 2 11 A PRO 144 C PRO 127 HELX_P A GLN 148 C GLN 131 5 3 5 A GLN 220 C GLN 203 HELX_P A ILE 224 C ILE 207 5 4 5 A SER 240 C SER 223 HELX_P A ALA 242 C ALA 225 5 5 3 B LYS 145 D LYS 108 HELX_P B GLU 157 D GLU 120 1 6 13 B HIS 170 D HIS 133 HELX_P B ALA 174 D ALA 137 5 7 5 B ARG 189 D ARG 152 HELX_P B LYS 203 D LYS 166 1 8 15 B SER 299 D SER 262 HELX_P B THR 301 D THR 264 5 9 3 disulf 2.043 B CYS 116 D SG CYS 79 1_555 B CYS 121 D SG CYS 84 1_555 covale 1.600 both D DG 4 B O3' DG 4 1_555 D 5IU 5 B P 5IU 5 1_555 covale 1.596 both D 5IU 5 B O3' 5IU 5 1_555 D DA 6 B P DA 6 1_555 covale 1.615 both D DC 7 B O3' DC 7 1_555 D 5IU 8 B P 5IU 8 1_555 covale 1.606 both D 5IU 8 B O3' 5IU 8 1_555 D 5IU 9 B P 5IU 9 1_555 covale 1.618 both D 5IU 9 B O3' 5IU 9 1_555 D 5IU 10 B P 5IU 10 1_555 covale 1.603 both D 5IU 10 B O3' 5IU 10 1_555 D DC 11 B P DC 11 1_555 hydrog WATSON-CRICK C DC 1 A N3 DC 1 1_555 D DG 17 B N1 DG 17 1_555 hydrog WATSON-CRICK C DC 1 A N4 DC 1 1_555 D DG 17 B O6 DG 17 1_555 hydrog WATSON-CRICK C DC 1 A O2 DC 1 1_555 D DG 17 B N2 DG 17 1_555 hydrog WATSON-CRICK C DT 2 A N3 DT 2 1_555 D DA 16 B N1 DA 16 1_555 hydrog WATSON-CRICK C DT 2 A O4 DT 2 1_555 D DA 16 B N6 DA 16 1_555 hydrog WATSON-CRICK C DC 3 A N3 DC 3 1_555 D DG 15 B N1 DG 15 1_555 hydrog WATSON-CRICK C DC 3 A N4 DC 3 1_555 D DG 15 B O6 DG 15 1_555 hydrog WATSON-CRICK C DC 3 A O2 DC 3 1_555 D DG 15 B N2 DG 15 1_555 hydrog WATSON-CRICK C DA 4 A N1 DA 4 1_555 D DT 14 B N3 DT 14 1_555 hydrog WATSON-CRICK C DA 4 A N6 DA 4 1_555 D DT 14 B O4 DT 14 1_555 hydrog WATSON-CRICK C DG 5 A N1 DG 5 1_555 D DC 13 B N3 DC 13 1_555 hydrog WATSON-CRICK C DG 5 A N2 DG 5 1_555 D DC 13 B O2 DC 13 1_555 hydrog WATSON-CRICK C DG 5 A O6 DG 5 1_555 D DC 13 B N4 DC 13 1_555 hydrog WATSON-CRICK C DG 6 A N1 DG 6 1_555 D DC 12 B N3 DC 12 1_555 hydrog WATSON-CRICK C DG 6 A N2 DG 6 1_555 D DC 12 B O2 DC 12 1_555 hydrog WATSON-CRICK C DG 6 A O6 DG 6 1_555 D DC 12 B N4 DC 12 1_555 hydrog WATSON-CRICK C DG 7 A N1 DG 7 1_555 D DC 11 B N3 DC 11 1_555 hydrog WATSON-CRICK C DG 7 A N2 DG 7 1_555 D DC 11 B O2 DC 11 1_555 hydrog WATSON-CRICK C DG 7 A O6 DG 7 1_555 D DC 11 B N4 DC 11 1_555 hydrog WATSON-CRICK C DA 8 A N1 DA 8 1_555 D 5IU 10 B N3 5IU 10 1_555 hydrog WATSON-CRICK C DA 8 A N6 DA 8 1_555 D 5IU 10 B O4 5IU 10 1_555 hydrog WATSON-CRICK C DA 9 A N1 DA 9 1_555 D 5IU 9 B N3 5IU 9 1_555 hydrog WATSON-CRICK C DA 9 A N6 DA 9 1_555 D 5IU 9 B O4 5IU 9 1_555 hydrog WATSON-CRICK C DA 10 A N1 DA 10 1_555 D 5IU 8 B N3 5IU 8 1_555 hydrog WATSON-CRICK C DA 10 A N6 DA 10 1_555 D 5IU 8 B O4 5IU 8 1_555 hydrog WATSON-CRICK C DG 11 A N1 DG 11 1_555 D DC 7 B N3 DC 7 1_555 hydrog WATSON-CRICK C DG 11 A N2 DG 11 1_555 D DC 7 B O2 DC 7 1_555 hydrog WATSON-CRICK C DG 11 A O6 DG 11 1_555 D DC 7 B N4 DC 7 1_555 hydrog WATSON-CRICK C DT 12 A N3 DT 12 1_555 D DA 6 B N1 DA 6 1_555 hydrog WATSON-CRICK C DT 12 A O4 DT 12 1_555 D DA 6 B N6 DA 6 1_555 hydrog TYPE_8_PAIR C DA 13 A N1 DA 13 1_555 D DG 4 B N1 DG 4 1_555 hydrog TYPE_8_PAIR C DA 13 A N6 DA 13 1_555 D DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK C DA 13 A N1 DA 13 1_555 D 5IU 5 B N3 5IU 5 1_555 hydrog WATSON-CRICK C DA 13 A N6 DA 13 1_555 D 5IU 5 B O4 5IU 5 1_555 hydrog WATSON-CRICK C DC 14 A N3 DC 14 1_555 D DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK C DC 14 A N4 DC 14 1_555 D DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK C DC 14 A O2 DC 14 1_555 D DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK C DA 15 A N1 DA 15 1_555 D DT 3 B N3 DT 3 1_555 hydrog WATSON-CRICK C DA 15 A N6 DA 15 1_555 D DT 3 B O4 DT 3 1_555 hydrog WATSON-CRICK C DG 16 A N1 DG 16 1_555 D DC 2 B N3 DC 2 1_555 hydrog WATSON-CRICK C DG 16 A N2 DG 16 1_555 D DC 2 B O2 DC 2 1_555 hydrog WATSON-CRICK C DG 16 A O6 DG 16 1_555 D DC 2 B N4 DC 2 1_555 hydrog WATSON-CRICK C DA 17 A N1 DA 17 1_555 D DT 1 B N3 DT 1 1_555 hydrog WATSON-CRICK C DA 17 A N6 DA 17 1_555 D DT 1 B O4 DT 1 1_555 TRANSCRIPTION/DNA transcription factor, NF-kB-DNA complex, TRANSCRIPTION-DNA COMPLEX TF65_MOUSE UNP 3 20 Q04207 YVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDGY YEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPVL SHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYAD PSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD KBF1_MOUSE UNP 4 39 P25799 GPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCED GVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAA VQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDI QIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE 1LEI PDB 1 1LEI 1LEI PDB 2 1LEI 20 291 1LEI 20 291 Q04207 A 1 3 274 39 350 1LEI 39 350 P25799 B 2 2 313 1 17 1LEI 1 17 1LEI C 3 1 17 1 17 1LEI 1 17 1LEI D 4 1 17 1 cloning artifact MET 18 1LEI A Q04207 UNP 1 1 cloning artifact ALA 19 1LEI A Q04207 UNP 2 2 initiating methionine MET 38 1LEI B P25799 UNP 1 3 5 3 2 4 5 4 3 3 5 3 4 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A TYR 20 C TYR 3 A GLU 25 C GLU 8 A THR 60 C THR 43 A ASN 64 C ASN 47 A ILE 110 C ILE 93 A SER 112 C SER 95 A VAL 178 C VAL 161 A PHE 184 C PHE 167 A ALA 156 C ALA 139 A ARG 166 C ARG 149 A THR 71 C THR 54 A VAL 77 C VAL 60 A TYR 99 C TYR 82 A ASP 103 C ASP 86 A CYS 95 C CYS 78 A ARG 96 C ARG 79 A VAL 178 C VAL 161 A PHE 184 C PHE 167 A ALA 156 C ALA 139 A ARG 166 C ARG 149 A PRO 172 C PRO 155 A LEU 174 C LEU 157 A GLU 89 C GLU 72 A VAL 91 C VAL 74 A GLY 117 C GLY 100 A GLN 119 C GLN 102 A ILE 196 C ILE 179 A VAL 199 C VAL 182 A GLU 211 C GLU 194 A CYS 216 C CYS 199 A ALA 249 C ALA 232 A ARG 253 C ARG 236 A VAL 244 C VAL 227 A HIS 245 C HIS 228 A SER 203 C SER 186 A SER 205 C SER 188 A MET 284 C MET 267 A LEU 289 C LEU 272 A VAL 266 C VAL 249 A ARG 274 C ARG 257 A GLU 225 C GLU 208 A GLY 230 C GLY 213 A TRP 233 C TRP 216 A ARG 236 C ARG 219 A SER 203 C SER 186 A SER 205 C SER 188 A MET 284 C MET 267 A LEU 289 C LEU 272 A VAL 266 C VAL 249 A ARG 274 C ARG 257 A GLU 279 C GLU 262 A LEU 280 C LEU 263 B LEU 42 D LEU 5 B ILE 44 D ILE 7 B GLN 81 D GLN 44 B ILE 84 D ILE 47 B VAL 131 D VAL 94 B GLY 133 D GLY 96 B ARG 56 D ARG 19 B TYR 57 D TYR 20 B ILE 139 D ILE 102 B HIS 141 D HIS 104 B SER 110 D SER 73 B LEU 111 D LEU 74 B ARG 227 D ARG 190 B VAL 233 D VAL 196 B VAL 209 D VAL 172 B LEU 218 D LEU 181 B LYS 92 D LYS 55 B VAL 98 D VAL 61 B VAL 120 D VAL 83 B THR 124 D THR 87 B CYS 116 D CYS 79 B GLU 117 D GLU 80 B ARG 227 D ARG 190 B VAL 233 D VAL 196 B VAL 209 D VAL 172 B LEU 218 D LEU 181 B ILE 237 D ILE 200 B TYR 238 D TYR 201 B ILE 250 D ILE 213 B MET 253 D MET 216 B GLU 265 D GLU 228 B CYS 270 D CYS 233 B ALA 308 D ALA 271 B LYS 312 D LYS 275 B VAL 303 D VAL 266 B HIS 304 D HIS 267 B ALA 257 D ALA 220 B CYS 259 D CYS 222 B LYS 343 D LYS 306 B TYR 348 D TYR 311 B ALA 325 D ALA 288 B ARG 332 D ARG 295 B GLN 279 D GLN 242 B GLU 284 D GLU 247 B TRP 292 D TRP 255 B PHE 295 D PHE 258 21 C 2 2 2