0.014205 0.000000 0.002530 0.000000 0.013850 0.000000 0.000000 0.000000 0.014068 0.00000 0.00000 0.00000 Weber, P.C. Lee, S.L. Lewandowski, F.A. Schadt, M.C. Chang, C.H. Kettner, C.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 100.10 90.00 70.400 72.200 72.200 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C20 H31 B N4 O5 418.295 AC-(D)PHE-PRO-BOROHOMOORNITHINE-OH non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 34 3750 3757 10.1021/bi00011a033 7893672 Kinetic and crystallographic studies of thrombin with Ac-(D)Phe-Pro-boroArg-OH and its lysine, amidine, homolysine, and ornithine analogs. 1995 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 4096.534 ALPHA-THROMBIN 3.4.21.5 1 nat polymer 29780.219 ALPHA-THROMBIN 3.4.21.5 1 nat polymer 1468.517 HIRUDIN RESIDUES 54 - 65 1 man polymer 418.295 AC-(D)PHE-PRO-BOROHOMOORNITHINE-OH 1 syn non-polymer 18.015 water 122 nat water no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L polypeptide(L) no no IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE H polypeptide(L) no no GDFEEIPEEYLQ GDFEEIPEEYLQ I polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n medicinal leech Hirudo sample 6421 Hirudo medicinalis human Homo sample 9606 BLOOD Homo sapiens BLOOD human Homo sample 9606 BLOOD Homo sapiens BLOOD 2.55 51.85 repository Initial release Version format compliance Version format compliance 1 0 1996-11-08 1 1 2008-03-24 1 2 2011-07-13 Y 1994-12-27 REL DI5 AC-(D)PHE-PRO-BOROHOMOORNITHINE-OH HOH water THROMBIN IS CLEAVED BETWEEN RESIDUES 15 AND 16. CHAIN IDENTIFIER *L* IS USED FOR RESIDUES 1H - 15 AND CHAIN IDENTIFIER *H* IS USED FOR RESIDUES 16 - 247. CHAIN IDENTIFIER *I* IS USED FOR THE 12-RESIDUE HIRUDIN PEPTIDE. CHYMOTRYPSIN NUMBERING (RATHER THAN SEQUENTIAL) SYSTEM IS USED, BASED ON THE TOPOLOGICAL ALIGNMENT WITH THE STRUCTURE OF CHYMOTRYPSIN (W.BODE ET AL., 1989, EMBO J. 8, 3467-3475). DI5 400 4 DI5 DI5 400 H HOH 503 5 HOH HOH 503 L HOH 515 5 HOH HOH 515 L HOH 555 5 HOH HOH 555 L HOH 560 5 HOH HOH 560 L HOH 595 5 HOH HOH 595 L HOH 596 5 HOH HOH 596 L HOH 602 5 HOH HOH 602 L HOH 636 5 HOH HOH 636 L HOH 643 5 HOH HOH 643 L HOH 653 5 HOH HOH 653 L HOH 657 5 HOH HOH 657 L HOH 501 5 HOH HOH 501 H HOH 502 5 HOH HOH 502 H HOH 504 5 HOH HOH 504 H HOH 505 5 HOH HOH 505 H HOH 506 5 HOH HOH 506 H HOH 507 5 HOH HOH 507 H HOH 508 5 HOH HOH 508 H HOH 510 5 HOH HOH 510 H HOH 511 5 HOH HOH 511 H HOH 512 5 HOH HOH 512 H HOH 513 5 HOH HOH 513 H HOH 516 5 HOH HOH 516 H HOH 519 5 HOH HOH 519 H HOH 522 5 HOH HOH 522 H HOH 523 5 HOH HOH 523 H HOH 527 5 HOH HOH 527 H HOH 529 5 HOH HOH 529 H HOH 532 5 HOH HOH 532 H HOH 533 5 HOH HOH 533 H HOH 534 5 HOH HOH 534 H HOH 535 5 HOH HOH 535 H HOH 537 5 HOH HOH 537 H HOH 538 5 HOH HOH 538 H HOH 541 5 HOH HOH 541 H HOH 542 5 HOH HOH 542 H HOH 544 5 HOH HOH 544 H HOH 548 5 HOH HOH 548 H HOH 550 5 HOH HOH 550 H HOH 551 5 HOH HOH 551 H HOH 552 5 HOH HOH 552 H HOH 553 5 HOH HOH 553 H HOH 554 5 HOH HOH 554 H HOH 556 5 HOH HOH 556 H HOH 557 5 HOH HOH 557 H HOH 558 5 HOH HOH 558 H HOH 559 5 HOH HOH 559 H HOH 562 5 HOH HOH 562 H HOH 563 5 HOH HOH 563 H HOH 564 5 HOH HOH 564 H HOH 567 5 HOH HOH 567 H HOH 568 5 HOH HOH 568 H HOH 569 5 HOH HOH 569 H HOH 570 5 HOH HOH 570 H HOH 571 5 HOH HOH 571 H HOH 572 5 HOH HOH 572 H HOH 573 5 HOH HOH 573 H HOH 574 5 HOH HOH 574 H HOH 575 5 HOH HOH 575 H HOH 577 5 HOH HOH 577 H HOH 578 5 HOH HOH 578 H HOH 579 5 HOH HOH 579 H HOH 580 5 HOH HOH 580 H HOH 581 5 HOH HOH 581 H HOH 582 5 HOH HOH 582 H HOH 583 5 HOH HOH 583 H HOH 584 5 HOH HOH 584 H HOH 585 5 HOH HOH 585 H HOH 586 5 HOH HOH 586 H HOH 587 5 HOH HOH 587 H HOH 588 5 HOH HOH 588 H HOH 589 5 HOH HOH 589 H HOH 590 5 HOH HOH 590 H HOH 594 5 HOH HOH 594 H HOH 598 5 HOH HOH 598 H HOH 599 5 HOH HOH 599 H HOH 600 5 HOH HOH 600 H HOH 601 5 HOH HOH 601 H HOH 603 5 HOH HOH 603 H HOH 604 5 HOH HOH 604 H HOH 605 5 HOH HOH 605 H HOH 609 5 HOH HOH 609 H HOH 610 5 HOH HOH 610 H HOH 611 5 HOH HOH 611 H HOH 613 5 HOH HOH 613 H HOH 614 5 HOH HOH 614 H HOH 615 5 HOH HOH 615 H HOH 616 5 HOH HOH 616 H HOH 617 5 HOH HOH 617 H HOH 619 5 HOH HOH 619 H HOH 620 5 HOH HOH 620 H HOH 621 5 HOH HOH 621 H HOH 622 5 HOH HOH 622 H HOH 623 5 HOH HOH 623 H HOH 624 5 HOH HOH 624 H HOH 625 5 HOH HOH 625 H HOH 627 5 HOH HOH 627 H HOH 628 5 HOH HOH 628 H HOH 629 5 HOH HOH 629 H HOH 630 5 HOH HOH 630 H HOH 631 5 HOH HOH 631 H HOH 634 5 HOH HOH 634 H HOH 635 5 HOH HOH 635 H HOH 637 5 HOH HOH 637 H HOH 638 5 HOH HOH 638 H HOH 640 5 HOH HOH 640 H HOH 641 5 HOH HOH 641 H HOH 642 5 HOH HOH 642 H HOH 644 5 HOH HOH 644 H HOH 645 5 HOH HOH 645 H HOH 646 5 HOH HOH 646 H HOH 647 5 HOH HOH 647 H HOH 648 5 HOH HOH 648 H HOH 649 5 HOH HOH 649 H HOH 651 5 HOH HOH 651 H HOH 652 5 HOH HOH 652 H HOH 654 5 HOH HOH 654 H HOH 655 5 HOH HOH 655 H HOH 658 5 HOH HOH 658 H HOH 659 5 HOH HOH 659 H HOH 661 5 HOH HOH 661 H HOH 662 5 HOH HOH 662 H n 1 -5 L n 2 -4 L n 3 -3 L n 4 -2 L n 5 -1 L n 6 0 L ALA 1 n 7 B ALA 1 L ASP 1 n 8 A ASP 1 L CYS 1 n 9 CYS 1 L GLY 2 n 10 GLY 2 L LEU 3 n 11 LEU 3 L ARG 4 n 12 ARG 4 L PRO 5 n 13 PRO 5 L LEU 6 n 14 LEU 6 L PHE 7 n 15 PHE 7 L GLU 8 n 16 GLU 8 L LYS 9 n 17 LYS 9 L LYS 10 n 18 LYS 10 L SER 11 n 19 SER 11 L LEU 12 n 20 LEU 12 L GLU 13 n 21 GLU 13 L ASP 14 n 22 ASP 14 L LYS 14 n 23 A LYS 14 L THR 14 n 24 B THR 14 L GLU 14 n 25 C GLU 14 L ARG 14 n 26 D ARG 14 L GLU 14 n 27 E GLU 14 L LEU 14 n 28 F LEU 14 L LEU 14 n 29 G LEU 14 L GLU 14 n 30 H GLU 14 L SER 14 n 31 I SER 14 L TYR 14 n 32 J TYR 14 L n 33 15 L n 34 16 L n 35 17 L n 36 18 L ILE 16 n 1 ILE 16 H VAL 17 n 2 VAL 17 H GLU 18 n 3 GLU 18 H GLY 19 n 4 GLY 19 H SER 20 n 5 SER 20 H ASP 21 n 6 ASP 21 H ALA 22 n 7 ALA 22 H GLU 23 n 8 GLU 23 H ILE 24 n 9 ILE 24 H GLY 25 n 10 GLY 25 H MET 26 n 11 MET 26 H SER 27 n 12 SER 27 H PRO 28 n 13 PRO 28 H TRP 29 n 14 TRP 29 H GLN 30 n 15 GLN 30 H VAL 31 n 16 VAL 31 H MET 32 n 17 MET 32 H LEU 33 n 18 LEU 33 H PHE 34 n 19 PHE 34 H ARG 35 n 20 ARG 35 H LYS 36 n 21 LYS 36 H SER 36 n 22 A SER 36 H PRO 37 n 23 PRO 37 H GLN 38 n 24 GLN 38 H GLU 39 n 25 GLU 39 H LEU 40 n 26 LEU 40 H LEU 41 n 27 LEU 41 H CYS 42 n 28 CYS 42 H GLY 43 n 29 GLY 43 H ALA 44 n 30 ALA 44 H SER 45 n 31 SER 45 H LEU 46 n 32 LEU 46 H ILE 47 n 33 ILE 47 H SER 48 n 34 SER 48 H ASP 49 n 35 ASP 49 H ARG 50 n 36 ARG 50 H TRP 51 n 37 TRP 51 H VAL 52 n 38 VAL 52 H LEU 53 n 39 LEU 53 H THR 54 n 40 THR 54 H ALA 55 n 41 ALA 55 H ALA 56 n 42 ALA 56 H HIS 57 n 43 HIS 57 H CYS 58 n 44 CYS 58 H LEU 59 n 45 LEU 59 H LEU 60 n 46 LEU 60 H TYR 60 n 47 A TYR 60 H PRO 60 n 48 B PRO 60 H PRO 60 n 49 C PRO 60 H TRP 60 n 50 D TRP 60 H ASP 60 n 51 E ASP 60 H LYS 60 n 52 F LYS 60 H ASN 60 n 53 G ASN 60 H PHE 60 n 54 H PHE 60 H THR 60 n 55 I THR 60 H GLU 61 n 56 GLU 61 H ASN 62 n 57 ASN 62 H ASP 63 n 58 ASP 63 H LEU 64 n 59 LEU 64 H LEU 65 n 60 LEU 65 H VAL 66 n 61 VAL 66 H ARG 67 n 62 ARG 67 H ILE 68 n 63 ILE 68 H GLY 69 n 64 GLY 69 H LYS 70 n 65 LYS 70 H HIS 71 n 66 HIS 71 H SER 72 n 67 SER 72 H ARG 73 n 68 ARG 73 H THR 74 n 69 THR 74 H ARG 75 n 70 ARG 75 H TYR 76 n 71 TYR 76 H GLU 77 n 72 GLU 77 H ARG 77 n 73 A ARG 77 H ASN 78 n 74 ASN 78 H ILE 79 n 75 ILE 79 H GLU 80 n 76 GLU 80 H LYS 81 n 77 LYS 81 H ILE 82 n 78 ILE 82 H SER 83 n 79 SER 83 H MET 84 n 80 MET 84 H LEU 85 n 81 LEU 85 H GLU 86 n 82 GLU 86 H LYS 87 n 83 LYS 87 H ILE 88 n 84 ILE 88 H TYR 89 n 85 TYR 89 H ILE 90 n 86 ILE 90 H HIS 91 n 87 HIS 91 H PRO 92 n 88 PRO 92 H ARG 93 n 89 ARG 93 H TYR 94 n 90 TYR 94 H ASN 95 n 91 ASN 95 H TRP 96 n 92 TRP 96 H ARG 97 n 93 ARG 97 H GLU 97 n 94 A GLU 97 H ASN 98 n 95 ASN 98 H LEU 99 n 96 LEU 99 H ASP 100 n 97 ASP 100 H ARG 101 n 98 ARG 101 H ASP 102 n 99 ASP 102 H ILE 103 n 100 ILE 103 H ALA 104 n 101 ALA 104 H LEU 105 n 102 LEU 105 H MET 106 n 103 MET 106 H LYS 107 n 104 LYS 107 H LEU 108 n 105 LEU 108 H LYS 109 n 106 LYS 109 H LYS 110 n 107 LYS 110 H PRO 111 n 108 PRO 111 H VAL 112 n 109 VAL 112 H ALA 113 n 110 ALA 113 H PHE 114 n 111 PHE 114 H SER 115 n 112 SER 115 H ASP 116 n 113 ASP 116 H TYR 117 n 114 TYR 117 H ILE 118 n 115 ILE 118 H HIS 119 n 116 HIS 119 H PRO 120 n 117 PRO 120 H VAL 121 n 118 VAL 121 H CYS 122 n 119 CYS 122 H LEU 123 n 120 LEU 123 H PRO 124 n 121 PRO 124 H ASP 125 n 122 ASP 125 H ARG 126 n 123 ARG 126 H GLU 127 n 124 GLU 127 H THR 128 n 125 THR 128 H ALA 129 n 126 ALA 129 H ALA 129 n 127 A ALA 129 H SER 129 n 128 B SER 129 H LEU 129 n 129 C LEU 129 H LEU 130 n 130 LEU 130 H GLN 131 n 131 GLN 131 H ALA 132 n 132 ALA 132 H GLY 133 n 133 GLY 133 H TYR 134 n 134 TYR 134 H LYS 135 n 135 LYS 135 H GLY 136 n 136 GLY 136 H ARG 137 n 137 ARG 137 H VAL 138 n 138 VAL 138 H THR 139 n 139 THR 139 H GLY 140 n 140 GLY 140 H TRP 141 n 141 TRP 141 H GLY 142 n 142 GLY 142 H ASN 143 n 143 ASN 143 H LEU 144 n 144 LEU 144 H LYS 145 n 145 LYS 145 H GLU 146 n 146 GLU 146 H n 147 A 146 H n 148 B 146 H n 149 C 146 H n 150 D 146 H n 151 E 146 H n 152 F 146 H n 153 G 146 H n 154 H 146 H GLY 150 n 155 GLY 150 H GLN 151 n 156 GLN 151 H PRO 152 n 157 PRO 152 H SER 153 n 158 SER 153 H VAL 154 n 159 VAL 154 H LEU 155 n 160 LEU 155 H GLN 156 n 161 GLN 156 H VAL 157 n 162 VAL 157 H VAL 158 n 163 VAL 158 H ASN 159 n 164 ASN 159 H LEU 160 n 165 LEU 160 H PRO 161 n 166 PRO 161 H ILE 162 n 167 ILE 162 H VAL 163 n 168 VAL 163 H GLU 164 n 169 GLU 164 H ARG 165 n 170 ARG 165 H PRO 166 n 171 PRO 166 H VAL 167 n 172 VAL 167 H CYS 168 n 173 CYS 168 H LYS 169 n 174 LYS 169 H ASP 170 n 175 ASP 170 H SER 171 n 176 SER 171 H THR 172 n 177 THR 172 H ARG 173 n 178 ARG 173 H ILE 174 n 179 ILE 174 H ARG 175 n 180 ARG 175 H ILE 176 n 181 ILE 176 H THR 177 n 182 THR 177 H ASP 178 n 183 ASP 178 H ASN 179 n 184 ASN 179 H MET 180 n 185 MET 180 H PHE 181 n 186 PHE 181 H CYS 182 n 187 CYS 182 H ALA 183 n 188 ALA 183 H GLY 184 n 189 GLY 184 H TYR 184 n 190 A TYR 184 H LYS 185 n 191 LYS 185 H PRO 186 n 192 PRO 186 H ASP 186 n 193 A ASP 186 H GLU 186 n 194 B GLU 186 H GLY 186 n 195 C GLY 186 H LYS 186 n 196 D LYS 186 H ARG 187 n 197 ARG 187 H GLY 188 n 198 GLY 188 H ASP 189 n 199 ASP 189 H ALA 190 n 200 ALA 190 H CYS 191 n 201 CYS 191 H GLU 192 n 202 GLU 192 H GLY 193 n 203 GLY 193 H ASP 194 n 204 ASP 194 H SER 195 n 205 SER 195 H GLY 196 n 206 GLY 196 H GLY 197 n 207 GLY 197 H PRO 198 n 208 PRO 198 H PHE 199 n 209 PHE 199 H VAL 200 n 210 VAL 200 H MET 201 n 211 MET 201 H LYS 202 n 212 LYS 202 H SER 203 n 213 SER 203 H PRO 204 n 214 PRO 204 H PHE 204 n 215 A PHE 204 H ASN 204 n 216 B ASN 204 H ASN 205 n 217 ASN 205 H ARG 206 n 218 ARG 206 H TRP 207 n 219 TRP 207 H TYR 208 n 220 TYR 208 H GLN 209 n 221 GLN 209 H MET 210 n 222 MET 210 H GLY 211 n 223 GLY 211 H ILE 212 n 224 ILE 212 H VAL 213 n 225 VAL 213 H SER 214 n 226 SER 214 H TRP 215 n 227 TRP 215 H GLY 216 n 228 GLY 216 H GLU 217 n 229 GLU 217 H GLY 219 n 230 GLY 219 H CYS 220 n 231 CYS 220 H ASP 221 n 232 ASP 221 H ARG 221 n 233 A ARG 221 H ASP 222 n 234 ASP 222 H GLY 223 n 235 GLY 223 H LYS 224 n 236 LYS 224 H TYR 225 n 237 TYR 225 H GLY 226 n 238 GLY 226 H PHE 227 n 239 PHE 227 H TYR 228 n 240 TYR 228 H THR 229 n 241 THR 229 H HIS 230 n 242 HIS 230 H VAL 231 n 243 VAL 231 H PHE 232 n 244 PHE 232 H ARG 233 n 245 ARG 233 H LEU 234 n 246 LEU 234 H LYS 235 n 247 LYS 235 H LYS 236 n 248 LYS 236 H TRP 237 n 249 TRP 237 H ILE 238 n 250 ILE 238 H GLN 239 n 251 GLN 239 H LYS 240 n 252 LYS 240 H VAL 241 n 253 VAL 241 H ILE 242 n 254 ILE 242 H ASP 243 n 255 ASP 243 H GLN 244 n 256 GLN 244 H PHE 245 n 257 PHE 245 H n 258 246 H n 259 247 H GLY 54 n 1 GLY 54 I ASP 55 n 2 ASP 55 I PHE 56 n 3 PHE 56 I GLU 57 n 4 GLU 57 I GLU 58 n 5 GLU 58 I ILE 59 n 6 ILE 59 I PRO 60 n 7 PRO 60 I n 8 61 I n 9 62 I n 10 63 I n 11 64 I n 12 65 I author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H O ALA 44 B O ALA 30 H N VAL 31 B N VAL 16 H O MET 32 B O MET 17 H N ARG 67 B N ARG 62 H O VAL 66 B O VAL 61 H N SER 83 B N SER 79 H O VAL 52 B O VAL 38 H N MET 106 B N MET 103 H O LEU 105 B O LEU 102 H N TYR 89 B N TYR 85 H O GLY 136 B O GLY 136 H N LEU 160 B N LEU 165 H O PHE 181 B O PHE 186 H N TYR 228 B N TYR 240 H O PHE 227 B O PHE 239 H N TRP 215 B N TRP 227 H O TYR 208 B O TYR 220 H N MET 201 B N MET 211 1 L THR -5 A THR 1 1 Y 1 L PHE -4 A PHE 2 1 Y 1 L GLY -3 A GLY 3 1 Y 1 L SER -2 A SER 4 1 Y 1 L GLY -1 A GLY 5 1 Y 1 L GLU 0 A GLU 6 1 Y 1 L ILE 15 A ILE 33 1 Y 1 L ASP 16 A ASP 34 1 Y 1 L GLY 17 A GLY 35 1 Y 1 L ARG 18 A ARG 36 1 Y A 1 H THR 146 B THR 147 1 Y B 1 H TRP 146 B TRP 148 1 Y C 1 H THR 146 B THR 149 1 Y D 1 H ALA 146 B ALA 150 1 Y E 1 H ASN 146 B ASN 151 1 Y F 1 H VAL 146 B VAL 152 1 Y G 1 H GLY 146 B GLY 153 1 Y H 1 H LYS 146 B LYS 154 1 Y 1 H GLY 246 B GLY 258 1 Y 1 H GLU 247 B GLU 259 1 Y 1 I GLU 61 C GLU 8 1 Y 1 I GLU 62 C GLU 9 1 Y 1 I TYR 63 C TYR 10 1 Y 1 I LEU 64 C LEU 11 1 Y 1 I GLN 65 C GLN 12 1 Y 1 H H NH1 O ARG HOH 73 557 2.07 1 H H O1 O DI5 HOH 400 640 2.07 1 H H O O PHE HOH 114 604 2.11 A 1 H H OE1 NH1 GLU ARG 97 175 2.11 1 H H NH2 O ARG LEU 50 108 2.14 1 H H NH2 O ARG THR 165 177 2.17 1 L H OE2 NZ GLU LYS 8 202 2.19 1 -3.19 0.50 120.30 117.11 H H H NE CZ NH2 ARG ARG ARG 35 35 35 N 1 12.44 1.90 110.20 122.64 H H H CB CA C LEU LEU LEU 46 46 46 N 1 14.64 1.40 123.60 138.24 H H H CD NE CZ ARG ARG ARG 75 75 75 N 1 7.77 0.50 120.30 128.07 H H H NE CZ NH1 ARG ARG ARG 75 75 75 N 1 -4.19 0.50 120.30 116.11 H H H NE CZ NH2 ARG ARG ARG 75 75 75 N 1 -4.35 0.50 120.30 115.95 H H H NE CZ NH1 ARG ARG ARG 93 93 93 N 1 3.03 0.50 120.30 123.33 H H H NE CZ NH2 ARG ARG ARG 93 93 93 N 1 6.51 0.90 118.30 124.81 H H H CB CG OD1 ASP ASP ASP 116 116 116 N 1 -5.55 0.90 118.30 112.75 H H H CB CG OD2 ASP ASP ASP 116 116 116 N 1 7.54 1.10 114.20 121.74 H H H CA CB SG CYS CYS CYS 122 122 122 N 1 9.13 1.40 123.60 132.73 H H H CD NE CZ ARG ARG ARG 137 137 137 N 1 3.42 0.50 120.30 123.72 H H H NE CZ NH1 ARG ARG ARG 137 137 137 N 1 3.64 0.50 120.30 123.94 H H H NE CZ NH1 ARG ARG ARG 165 165 165 N 1 3.12 0.50 120.30 123.42 H H H NE CZ NH1 ARG ARG ARG 187 187 187 N 1 8.46 1.40 123.60 132.06 H H H CD NE CZ ARG ARG ARG 206 206 206 N 1 L PHE 7 -123.04 -87.84 1 H LYS 36 -53.90 -75.21 1 H LEU 41 -78.93 -70.67 A 1 H TYR 60 -160.09 77.56 G 1 H ASN 60 -162.92 88.86 1 H HIS 71 -130.38 -55.40 1 H GLU 77 -64.34 83.22 A 1 H ARG 77 -21.42 -66.65 1 H ASN 98 -142.41 28.39 1 H SER 115 -165.20 -160.17 A 1 H ASP 186 -103.54 43.84 1 H ASP 189 179.52 175.19 1 H ASP 243 -58.67 -72.68 0.195 2.25 6.0 11468 1 2.25 6.0 122 2440 30 0 2288 0.010 0.021 0.018 0.173 refinement PROFFT ALPHA-THROMBIN, HIRUDIN, AC-(D)PHE-PRO-BOROHOMOORNITHINE-OH HUMAN ALPHA-THROMBIN COMPLEXED WITH AC-(D)PHE-PRO-BOROORNITHINE-OH 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N L GLU 8 A GLU 16 HELX_P L LYS 10 A LYS 18 5 1 3 L GLU 14 A GLU 25 HELX_P L LEU 14 A LEU 29 1 2 5 C G H ALA 56 B ALA 42 HELX_P H CYS 58 B CYS 44 5 3 3 H PRO 60 B PRO 48 HELX_P H TRP 60 B TRP 50 5 4 3 B D H GLU 61 B GLU 56 HELX_P H ASP 63 B ASP 58 5 5 3 H ARG 126 B ARG 123 HELX_P H LEU 129 B LEU 129 1 6 7 C H ARG 165 B ARG 170 HELX_P H SER 171 B SER 176 1 7 7 H LYS 235 B LYS 247 HELX_P H GLN 244 B GLN 256 1 8 10 disulf 2.043 L CYS 1 A SG CYS 9 1_555 H CYS 122 B SG CYS 119 1_555 disulf 2.095 H CYS 42 B SG CYS 28 1_555 H CYS 58 B SG CYS 44 1_555 disulf 2.010 H CYS 168 B SG CYS 173 1_555 H CYS 182 B SG CYS 187 1_555 disulf 2.036 H CYS 191 B SG CYS 201 1_555 H CYS 220 B SG CYS 231 1_555 covale 1.568 H DI5 400 D B1 DI5 1_555 H SER 195 B OG SER 205 1_555 COMPLEX (SERINE PROTEASE/INHIBITOR) BLOOD COAGULATION, PLASMA, CALCIUM-BINDING, GLYCOPROTEIN, DUPLICATION, VITAMIN K, ZYMOGEN, GAMMA-CARBOXYGLUTAMIC ACID, ACUTE PHASE, LIVER, HYDROLASE, SERINE PROTEASE, KRINGLE, DISEASE MUTATION, COMPLEX (SERINE PROTEASE-INHIBITOR), COMPLEX (SERINE PROTEASE-INHIBITOR) complex H SER 36 B SER 22 A 1 H PRO 37 B PRO 23 -0.27 THRB_HUMAN UNP 1 328 P00734 THRB_HUMAN UNP 2 364 P00734 1LHG PDB 3 1LHG 328 363 1LHG -5 18 P00734 L 1 1 36 364 622 1LHG 16 247 P00734 H 2 1 259 54 65 1LHG 54 65 1LHG I 3 1 12 4 3 2 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel H GLY 43 B GLY 29 H SER 45 B SER 31 H GLN 30 B GLN 15 H ARG 35 B ARG 20 H LEU 64 B LEU 59 H ILE 68 B ILE 63 H LYS 81 B LYS 77 H MET 84 B MET 80 H TRP 51 B TRP 37 H THR 54 B THR 40 H ALA 104 B ALA 101 H LEU 108 B LEU 105 H LEU 85 B LEU 81 H ILE 90 B ILE 86 H LYS 135 B LYS 135 H GLY 140 B GLY 140 H GLN 156 B GLN 161 H PRO 161 B PRO 166 H MET 180 B MET 185 H ALA 183 B ALA 188 H GLY 226 B GLY 238 H HIS 230 B HIS 242 H TRP 207 B TRP 219 H TRP 215 B TRP 227 H PRO 198 B PRO 208 H LYS 202 B LYS 212 BINDING SITE FOR RESIDUE DI5 H 400 Software 17 H HIS 57 B HIS 43 17 1_555 H TRP 60 B TRP 50 D 17 1_555 H GLU 97 B GLU 94 A 17 1_555 H ILE 174 B ILE 179 17 1_555 H ALA 190 B ALA 200 17 1_555 H CYS 191 B CYS 201 17 1_555 H GLU 192 B GLU 202 17 1_555 H GLY 193 B GLY 203 17 1_555 H ASP 194 B ASP 204 17 1_555 H SER 195 B SER 205 17 1_555 H SER 214 B SER 226 17 1_555 H TRP 215 B TRP 227 17 1_555 H GLY 216 B GLY 228 17 1_555 H GLU 217 B GLU 229 17 1_555 H GLY 219 B GLY 230 17 1_555 H HOH 508 F HOH 17 1_555 H HOH 640 F HOH 17 1_555 5 C 1 2 1