0.009649
0.005571
-0.000000
0.000000
0.011142
-0.000000
0.000000
0.000000
0.011835
0.00000
0.00000
0.00000
Grishkovskaya, I.
Avvakumov, G.V.
Hammond, G.L.
Catalano, M.G.
Muller, Y.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
103.638
103.638
84.492
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C18 H24 O2
272.382
ESTRADIOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
Y
89
N
C
Y
90
N
C
Y
91
N
C
N
92
N
O
Y
93
N
C
Y
94
N
C
N
95
N
C
N
96
N
C
N
97
S
C
N
98
S
C
Y
99
N
C
N
100
N
C
N
101
N
C
N
102
S
C
N
103
S
C
N
104
N
C
N
105
N
C
N
106
S
C
N
107
N
O
N
108
N
C
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
S
C
N
135
N
C
N
136
N
O
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
N
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
N
N
154
S
C
N
155
N
C
N
156
N
O
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
N
N
173
N
C
N
174
N
C
N
175
N
O
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
Y
187
N
C
Y
188
N
N
Y
189
N
C
Y
190
N
C
Y
191
N
N
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
S
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
N
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
S
N
282
N
C
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
O
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
R
C
N
354
N
O
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
N
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
N
C
N
422
N
C
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
Y
83
N
doub
Y
84
N
sing
N
85
N
sing
Y
86
N
sing
N
87
N
sing
N
88
N
sing
Y
89
N
doub
N
90
N
sing
Y
91
N
sing
N
92
N
sing
N
93
N
sing
Y
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
Y
187
N
sing
Y
188
N
doub
Y
189
N
doub
N
190
N
sing
Y
191
N
sing
N
192
N
sing
Y
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
Y
295
N
doub
Y
296
N
sing
Y
297
N
sing
N
298
N
sing
Y
299
N
doub
N
300
N
sing
Y
301
N
doub
N
302
N
sing
Y
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
Y
364
N
doub
Y
365
N
sing
Y
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
sing
Y
373
N
doub
N
374
N
sing
Y
375
N
doub
N
376
N
sing
Y
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
Y
392
N
doub
Y
393
N
sing
Y
394
N
sing
N
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
277
32086
32093
10.1074/jbc.M203999200
12065592
Steroid Ligands Bind Human Sex Hormone-binding Globulin in Specific Orientations and Produce Distinct Changes in Protein Conformation
2002
10.2210/pdb1lhu/pdb
pdb_00001lhu
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2000-08-16
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.9102
1.0
BW7A
EMBL/DESY, HAMBURG
0.9102
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7A
20972.832
SEX HORMONE-BINDING GLOBULIN
LG-like 1 domain, Residues 43-218
1
man
polymer
40.078
CALCIUM ION
1
syn
non-polymer
272.382
ESTRADIOL
1
syn
non-polymer
18.015
water
96
nat
water
SHBG, Sex steroid-binding protein, SBP, Testis-specific androgen-binding protein, ABP
no
no
LRPVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQL
HNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPA
LDGCLRRDSWLDKQAEISASAPTSLRSCD
LRPVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQL
HNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPA
LDGCLRRDSWLDKQAEISASAPTSLRSCD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
JM109
Plasmid
pGEX-2T
1
2.08
40.87
VAPOR DIFFUSION, HANGING DROP
7.5
HEPES, Calcium chloride, estradiol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-10-23
1
1
2008-04-28
1
2
2011-07-13
1
3
2017-10-11
1
4
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF THE N-TERMINAL LAMININ G-LIKE DOMAINOF SHBG IN COMPLEX WITH DIHYDROTESTOSTERONE
Crystal Structure Of The N-Terminal G-Domain Of Shbg In Complex With Zinc
The Structure of the N-terminal LG domain of SHBG in crystals soaked with EDTA
The crystal structure of the human sex hormone-binding globulin (tetragonal crystal form)
Crystal structure of the N-terminal LG-domain of SHBG in complex with 5alpha-androstane-3beta,17alpha-diol
Crystal structure of the N-terminal LG-domain of SHBG in complex with 5alpha-androstane-3beta,17beta-diol
Crystal structure of the N-terminal LG-domain of SHBG in complex with norgestrel
Crystal structure of the N-terminal LG-domain of SHBG in complex with 2-methoxyestradiol
RCSB
Y
RCSB
2002-04-17
REL
REL
CA
CALCIUM ION
EST
ESTRADIOL
HOH
water
1D2S
PDB ENTRY 1D2S
PDB
experimental model
CA2
401
2
CA
CA
401
A
ESO
301
3
EST
EST
301
A
WAT
1
4
HOH
HOH
402
A
WAT
2
4
HOH
HOH
403
A
WAT
3
4
HOH
HOH
404
A
WAT
4
4
HOH
HOH
405
A
WAT
5
4
HOH
HOH
406
A
WAT
6
4
HOH
HOH
407
A
WAT
7
4
HOH
HOH
408
A
WAT
8
4
HOH
HOH
409
A
WAT
9
4
HOH
HOH
410
A
WAT
10
4
HOH
HOH
411
A
WAT
11
4
HOH
HOH
412
A
WAT
12
4
HOH
HOH
413
A
WAT
13
4
HOH
HOH
414
A
WAT
14
4
HOH
HOH
415
A
WAT
15
4
HOH
HOH
416
A
WAT
16
4
HOH
HOH
417
A
WAT
17
4
HOH
HOH
418
A
WAT
18
4
HOH
HOH
419
A
WAT
19
4
HOH
HOH
420
A
WAT
20
4
HOH
HOH
421
A
WAT
21
4
HOH
HOH
422
A
WAT
22
4
HOH
HOH
423
A
WAT
23
4
HOH
HOH
424
A
WAT
24
4
HOH
HOH
425
A
WAT
25
4
HOH
HOH
426
A
WAT
26
4
HOH
HOH
427
A
WAT
27
4
HOH
HOH
428
A
WAT
28
4
HOH
HOH
429
A
WAT
29
4
HOH
HOH
430
A
WAT
30
4
HOH
HOH
431
A
WAT
31
4
HOH
HOH
432
A
WAT
32
4
HOH
HOH
433
A
WAT
33
4
HOH
HOH
434
A
WAT
34
4
HOH
HOH
435
A
WAT
35
4
HOH
HOH
436
A
WAT
36
4
HOH
HOH
437
A
WAT
37
4
HOH
HOH
438
A
WAT
38
4
HOH
HOH
439
A
WAT
39
4
HOH
HOH
440
A
WAT
40
4
HOH
HOH
441
A
WAT
41
4
HOH
HOH
442
A
WAT
42
4
HOH
HOH
443
A
WAT
43
4
HOH
HOH
444
A
WAT
44
4
HOH
HOH
445
A
WAT
45
4
HOH
HOH
446
A
WAT
46
4
HOH
HOH
447
A
WAT
47
4
HOH
HOH
448
A
WAT
48
4
HOH
HOH
449
A
WAT
49
4
HOH
HOH
450
A
WAT
50
4
HOH
HOH
451
A
WAT
51
4
HOH
HOH
452
A
WAT
52
4
HOH
HOH
453
A
WAT
53
4
HOH
HOH
454
A
WAT
54
4
HOH
HOH
455
A
WAT
55
4
HOH
HOH
456
A
WAT
56
4
HOH
HOH
457
A
WAT
57
4
HOH
HOH
458
A
WAT
58
4
HOH
HOH
459
A
WAT
59
4
HOH
HOH
460
A
WAT
60
4
HOH
HOH
461
A
WAT
61
4
HOH
HOH
462
A
WAT
62
4
HOH
HOH
463
A
WAT
63
4
HOH
HOH
464
A
WAT
64
4
HOH
HOH
465
A
WAT
65
4
HOH
HOH
466
A
WAT
66
4
HOH
HOH
467
A
WAT
67
4
HOH
HOH
468
A
WAT
68
4
HOH
HOH
469
A
WAT
69
4
HOH
HOH
470
A
WAT
70
4
HOH
HOH
471
A
WAT
71
4
HOH
HOH
472
A
WAT
72
4
HOH
HOH
473
A
WAT
73
4
HOH
HOH
474
A
WAT
74
4
HOH
HOH
475
A
WAT
75
4
HOH
HOH
476
A
WAT
76
4
HOH
HOH
477
A
WAT
77
4
HOH
HOH
478
A
WAT
78
4
HOH
HOH
479
A
WAT
79
4
HOH
HOH
480
A
WAT
80
4
HOH
HOH
481
A
WAT
81
4
HOH
HOH
482
A
WAT
82
4
HOH
HOH
483
A
WAT
83
4
HOH
HOH
484
A
WAT
84
4
HOH
HOH
485
A
WAT
85
4
HOH
HOH
486
A
WAT
86
4
HOH
HOH
487
A
WAT
87
4
HOH
HOH
488
A
WAT
88
4
HOH
HOH
489
A
WAT
89
4
HOH
HOH
490
A
WAT
90
4
HOH
HOH
491
A
WAT
91
4
HOH
HOH
492
A
WAT
92
4
HOH
HOH
493
A
WAT
93
4
HOH
HOH
494
A
WAT
94
4
HOH
HOH
495
A
WAT
95
4
HOH
HOH
496
A
WAT
96
4
HOH
HOH
497
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
PRO
14
n
14
PRO
14
A
ALA
15
n
15
ALA
15
A
VAL
16
n
16
VAL
16
A
HIS
17
n
17
HIS
17
A
LEU
18
n
18
LEU
18
A
SER
19
n
19
SER
19
A
ASN
20
n
20
ASN
20
A
GLY
21
n
21
GLY
21
A
PRO
22
n
22
PRO
22
A
GLY
23
n
23
GLY
23
A
GLN
24
n
24
GLN
24
A
GLU
25
n
25
GLU
25
A
PRO
26
n
26
PRO
26
A
ILE
27
n
27
ILE
27
A
ALA
28
n
28
ALA
28
A
VAL
29
n
29
VAL
29
A
MET
30
n
30
MET
30
A
THR
31
n
31
THR
31
A
PHE
32
n
32
PHE
32
A
ASP
33
n
33
ASP
33
A
LEU
34
n
34
LEU
34
A
THR
35
n
35
THR
35
A
LYS
36
n
36
LYS
36
A
ILE
37
n
37
ILE
37
A
THR
38
n
38
THR
38
A
LYS
39
n
39
LYS
39
A
THR
40
n
40
THR
40
A
SER
41
n
41
SER
41
A
SER
42
n
42
SER
42
A
SER
43
n
43
SER
43
A
PHE
44
n
44
PHE
44
A
GLU
45
n
45
GLU
45
A
VAL
46
n
46
VAL
46
A
ARG
47
n
47
ARG
47
A
THR
48
n
48
THR
48
A
TRP
49
n
49
TRP
49
A
ASP
50
n
50
ASP
50
A
PRO
51
n
51
PRO
51
A
GLU
52
n
52
GLU
52
A
GLY
53
n
53
GLY
53
A
VAL
54
n
54
VAL
54
A
ILE
55
n
55
ILE
55
A
PHE
56
n
56
PHE
56
A
TYR
57
n
57
TYR
57
A
GLY
58
n
58
GLY
58
A
ASP
59
n
59
ASP
59
A
THR
60
n
60
THR
60
A
ASN
61
n
61
ASN
61
A
PRO
62
n
62
PRO
62
A
LYS
63
n
63
LYS
63
A
ASP
64
n
64
ASP
64
A
ASP
65
n
65
ASP
65
A
TRP
66
n
66
TRP
66
A
PHE
67
n
67
PHE
67
A
MET
68
n
68
MET
68
A
LEU
69
n
69
LEU
69
A
GLY
70
n
70
GLY
70
A
LEU
71
n
71
LEU
71
A
ARG
72
n
72
ARG
72
A
ASP
73
n
73
ASP
73
A
GLY
74
n
74
GLY
74
A
ARG
75
n
75
ARG
75
A
PRO
76
n
76
PRO
76
A
GLU
77
n
77
GLU
77
A
ILE
78
n
78
ILE
78
A
GLN
79
n
79
GLN
79
A
LEU
80
n
80
LEU
80
A
HIS
81
n
81
HIS
81
A
ASN
82
n
82
ASN
82
A
HIS
83
n
83
HIS
83
A
TRP
84
n
84
TRP
84
A
ALA
85
n
85
ALA
85
A
GLN
86
n
86
GLN
86
A
LEU
87
n
87
LEU
87
A
THR
88
n
88
THR
88
A
VAL
89
n
89
VAL
89
A
GLY
90
n
90
GLY
90
A
ALA
91
n
91
ALA
91
A
GLY
92
n
92
GLY
92
A
PRO
93
n
93
PRO
93
A
ARG
94
n
94
ARG
94
A
LEU
95
n
95
LEU
95
A
ASP
96
n
96
ASP
96
A
ASP
97
n
97
ASP
97
A
GLY
98
n
98
GLY
98
A
ARG
99
n
99
ARG
99
A
TRP
100
n
100
TRP
100
A
HIS
101
n
101
HIS
101
A
GLN
102
n
102
GLN
102
A
VAL
103
n
103
VAL
103
A
GLU
104
n
104
GLU
104
A
VAL
105
n
105
VAL
105
A
LYS
106
n
106
LYS
106
A
MET
107
n
107
MET
107
A
GLU
108
n
108
GLU
108
A
GLY
109
n
109
GLY
109
A
ASP
110
n
110
ASP
110
A
SER
111
n
111
SER
111
A
VAL
112
n
112
VAL
112
A
LEU
113
n
113
LEU
113
A
LEU
114
n
114
LEU
114
A
GLU
115
n
115
GLU
115
A
VAL
116
n
116
VAL
116
A
ASP
117
n
117
ASP
117
A
GLY
118
n
118
GLY
118
A
GLU
119
n
119
GLU
119
A
GLU
120
n
120
GLU
120
A
VAL
121
n
121
VAL
121
A
LEU
122
n
122
LEU
122
A
ARG
123
n
123
ARG
123
A
LEU
124
n
124
LEU
124
A
ARG
125
n
125
ARG
125
A
GLN
126
n
126
GLN
126
A
VAL
127
n
127
VAL
127
A
SER
128
n
128
SER
128
A
GLY
129
n
129
GLY
129
A
PRO
130
n
130
PRO
130
A
LEU
131
n
131
LEU
131
A
THR
132
n
132
THR
132
A
SER
133
n
133
SER
133
A
LYS
134
n
134
LYS
134
A
ARG
135
n
135
ARG
135
A
HIS
136
n
136
HIS
136
A
PRO
137
n
137
PRO
137
A
ILE
138
n
138
ILE
138
A
MET
139
n
139
MET
139
A
ARG
140
n
140
ARG
140
A
ILE
141
n
141
ILE
141
A
ALA
142
n
142
ALA
142
A
LEU
143
n
143
LEU
143
A
GLY
144
n
144
GLY
144
A
GLY
145
n
145
GLY
145
A
LEU
146
n
146
LEU
146
A
LEU
147
n
147
LEU
147
A
PHE
148
n
148
PHE
148
A
PRO
149
n
149
PRO
149
A
ALA
150
n
150
ALA
150
A
SER
151
n
151
SER
151
A
ASN
152
n
152
ASN
152
A
LEU
153
n
153
LEU
153
A
ARG
154
n
154
ARG
154
A
LEU
155
n
155
LEU
155
A
PRO
156
n
156
PRO
156
A
LEU
157
n
157
LEU
157
A
VAL
158
n
158
VAL
158
A
PRO
159
n
159
PRO
159
A
ALA
160
n
160
ALA
160
A
LEU
161
n
161
LEU
161
A
ASP
162
n
162
ASP
162
A
GLY
163
n
163
GLY
163
A
CYS
164
n
164
CYS
164
A
LEU
165
n
165
LEU
165
A
ARG
166
n
166
ARG
166
A
ARG
167
n
167
ARG
167
A
ASP
168
n
168
ASP
168
A
SER
169
n
169
SER
169
A
TRP
170
n
170
TRP
170
A
LEU
171
n
171
LEU
171
A
ASP
172
n
172
ASP
172
A
LYS
173
n
173
LYS
173
A
GLN
174
n
174
GLN
174
A
ALA
175
n
175
ALA
175
A
GLU
176
n
176
GLU
176
A
ILE
177
n
177
ILE
177
A
SER
178
n
178
SER
178
A
ALA
179
n
179
ALA
179
A
SER
180
n
180
SER
180
A
ALA
181
n
181
ALA
181
A
PRO
182
n
182
PRO
182
A
THR
183
n
183
THR
183
A
SER
184
n
184
SER
184
A
LEU
185
n
185
LEU
185
A
ARG
186
n
186
ARG
186
A
SER
187
n
187
SER
187
A
CYS
188
n
188
CYS
188
A
n
189
189
A
author_defined_assembly
2
dimeric
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
ASP
50
A
OD2
ASP
50
1_555
53.3
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
GLU
52
A
O
GLU
52
1_555
76.6
A
ASP
50
A
OD2
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
GLU
52
A
O
GLU
52
1_555
95.2
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
ALA
160
A
O
ALA
160
1_555
129.7
A
ASP
50
A
OD2
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
ALA
160
A
O
ALA
160
1_555
84.5
A
GLU
52
A
O
GLU
52
1_555
A
CA
401
B
CA
CA
1_555
A
ALA
160
A
O
ALA
160
1_555
82.2
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
416
D
O
HOH
1_555
137.9
A
ASP
50
A
OD2
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
416
D
O
HOH
1_555
168.3
A
GLU
52
A
O
GLU
52
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
416
D
O
HOH
1_555
85.9
A
ALA
160
A
O
ALA
160
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
416
D
O
HOH
1_555
84.1
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
429
D
O
HOH
1_555
72.1
A
ASP
50
A
OD2
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
429
D
O
HOH
1_555
116.3
A
GLU
52
A
O
GLU
52
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
429
D
O
HOH
1_555
102.1
A
ALA
160
A
O
ALA
160
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
429
D
O
HOH
1_555
157.9
A
HOH
416
D
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
429
D
O
HOH
1_555
74.7
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
113.3
A
ASP
50
A
OD2
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
83.1
A
GLU
52
A
O
GLU
52
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
165.0
A
ALA
160
A
O
ALA
160
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
82.8
A
HOH
416
D
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
92.8
A
HOH
429
D
O
HOH
1_555
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
91.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_556
x-y,-y,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
84.4920000000
A
N
VAL
16
A
N
VAL
16
A
O
LEU
165
A
O
LEU
165
A
O
SER
169
A
O
SER
169
A
N
SER
43
A
N
SER
43
A
N
PHE
44
A
N
PHE
44
A
O
VAL
103
A
O
VAL
103
A
N
LYS
106
A
N
LYS
106
A
O
LEU
113
A
O
LEU
113
A
N
LEU
114
A
N
LEU
114
A
O
LEU
122
A
O
LEU
122
A
O
VAL
89
A
O
VAL
89
A
N
ILE
78
A
N
ILE
78
A
O
GLN
79
A
O
GLN
79
A
N
MET
68
A
N
MET
68
A
O
LEU
69
A
O
LEU
69
A
N
PHE
56
A
N
PHE
56
A
N
TYR
57
A
N
TYR
57
A
O
ALA
142
A
O
ALA
142
A
O
MET
139
A
O
MET
139
A
N
PHE
32
A
N
PHE
32
A
N
THR
31
A
N
THR
31
A
O
ILE
177
A
O
ILE
177
1
A
LEU
1
A
LEU
1
1
Y
1
A
ARG
2
A
ARG
2
1
Y
1
A
PRO
3
A
PRO
3
1
Y
1
A
VAL
4
A
VAL
4
1
Y
1
A
LEU
5
A
LEU
5
1
Y
1
A
PRO
6
A
PRO
6
1
Y
1
A
THR
7
A
THR
7
1
Y
1
A
GLN
8
A
GLN
8
1
Y
1
A
SER
9
A
SER
9
1
Y
1
A
ALA
10
A
ALA
10
1
Y
1
A
HIS
11
A
HIS
11
1
Y
1
A
ASP
12
A
ASP
12
1
Y
1
A
PRO
13
A
PRO
13
1
Y
1
A
ASP
189
A
ASP
189
1
Y
1
A
GLN
24
-89.44
-72.35
1
A
THR
40
-116.05
51.83
1
A
ASN
61
-163.55
111.43
1
A
ASP
65
-154.45
86.40
1
A
ASP
96
-89.89
48.42
1
A
PRO
137
-70.92
21.35
1
A
LEU
171
51.39
-125.35
1
A
LEU
185
-58.93
108.92
0.237
0.204
1.80
19.82
1573
15751
14178
RANDOM
10000
10000
1
THROUGHOUT
0
FOURIER SYNTHESIS
PDB ENTRY 1D2S
Engh & Huber
1.80
19.82
96
1511
21
0
1394
0.01
1.58
1.80
20.00
1LHU
15751
15751
0.032
1
96.6
0.28
1.80
1.82
70.4
data collection
MAR345
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
CRYSTAL STRUCTURE OF THE N-TERMINAL LG-DOMAIN OF SHBG IN COMPLEX WITH ESTRADIOL
1
N
N
2
N
N
3
N
N
4
N
N
A
THR
35
A
THR
35
HELX_P
A
ILE
37
A
ILE
37
5
1
3
A
PRO
130
A
PRO
130
HELX_P
A
LYS
134
A
LYS
134
5
2
5
A
PRO
149
A
PRO
149
HELX_P
A
LEU
153
A
LEU
153
5
3
5
A
ASP
172
A
ASP
172
HELX_P
A
GLN
174
A
GLN
174
5
4
3
disulf
2.031
A
CYS
164
A
SG
CYS
164
1_555
A
CYS
188
A
SG
CYS
188
1_555
metalc
2.449
A
ASP
50
A
OD1
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
metalc
2.441
A
ASP
50
A
OD2
ASP
50
1_555
A
CA
401
B
CA
CA
1_555
metalc
2.290
A
GLU
52
A
O
GLU
52
1_555
A
CA
401
B
CA
CA
1_555
metalc
2.263
A
ALA
160
A
O
ALA
160
1_555
A
CA
401
B
CA
CA
1_555
metalc
2.562
A
CA
401
B
CA
CA
1_555
A
HOH
416
D
O
HOH
1_555
metalc
2.390
A
CA
401
B
CA
CA
1_555
A
HOH
429
D
O
HOH
1_555
metalc
2.373
A
CA
401
B
CA
CA
1_555
A
HOH
447
D
O
HOH
1_555
TRANSPORT PROTEIN
SHBG, estradiol, TRANSPORT PROTEIN
SHBG_HUMAN
UNP
1
30
P04278
LRPVLPTQSAHDPPAVHLSNGPGQEPIAVMTFDLTKITKTSSSFEVRTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQL
HNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPA
LDGCLRRDSWLDKQAEISASAPTSLRSCD
30
218
1LHU
1
189
P04278
A
1
1
189
6
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
15
A
ALA
15
A
HIS
17
A
HIS
17
A
GLY
163
A
GLY
163
A
TRP
170
A
TRP
170
A
SER
41
A
SER
41
A
THR
48
A
THR
48
A
HIS
101
A
HIS
101
A
GLU
108
A
GLU
108
A
SER
111
A
SER
111
A
VAL
116
A
VAL
116
A
GLU
119
A
GLU
119
A
LEU
124
A
LEU
124
A
GLN
86
A
GLN
86
A
GLY
90
A
GLY
90
A
ARG
75
A
ARG
75
A
HIS
81
A
HIS
81
A
ASP
65
A
ASP
65
A
ARG
72
A
ARG
72
A
GLY
53
A
GLY
53
A
ASN
61
A
ASN
61
A
ILE
138
A
ILE
138
A
LEU
143
A
LEU
143
A
ALA
28
A
ALA
28
A
ASP
33
A
ASP
33
A
GLU
176
A
GLU
176
A
SER
180
A
SER
180
BINDING SITE FOR RESIDUE CA A 401
A
CA
401
Software
6
BINDING SITE FOR RESIDUE EST A 301
A
EST
301
Software
8
A
ASP
50
A
ASP
50
6
1_555
A
GLU
52
A
GLU
52
6
1_555
A
ALA
160
A
ALA
160
6
1_555
A
HOH
416
D
HOH
6
1_555
A
HOH
429
D
HOH
6
1_555
A
HOH
447
D
HOH
6
1_555
A
SER
41
A
SER
41
8
1_555
A
SER
42
A
SER
42
8
1_555
A
ASP
65
A
ASP
65
8
1_555
A
PHE
67
A
PHE
67
8
1_555
A
ASN
82
A
ASN
82
8
1_555
A
VAL
105
A
VAL
105
8
1_555
A
LYS
134
A
LYS
134
8
1_555
A
ILE
141
A
ILE
141
8
1_555
155
H 3 2