0.014715 -0.000000 0.000000 0.000000 0.009847 0.000000 0.000000 0.000000 0.008530 0.00000 0.00000 0.00000 Cheong, C.G. Bauer, C.B. Brushaber, K.R. Escalante-Semerena, J.C. Rayment, I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 67.960 101.550 117.230 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C8 H10 N O6 P 247.142 PYRIDOXAL-5'-PHOSPHATE VITAMIN B6 Phosphate non-polymer O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 41 4798 4808 10.1021/bi012111w 11939774 Three-dimensional structure of the L-threonine-O-3-phosphate decarboxylase (CobD) enzyme from Salmonella enterica. 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD MAD M x-ray 1 0.94645 1.0 0.97915 1.0 0.97926 1.0 1.0205 1.0 19-ID APS 0.94645, 0.97915, 0.97926, 1.0205 SYNCHROTRON APS BEAMLINE 19-ID 40849.848 L-threonine-O-3-phosphate decarboxylase 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 247.142 PYRIDOXAL-5'-PHOSPHATE 1 syn non-polymer 62.068 1,2-ETHANEDIOL 2 syn non-polymer 18.015 water 215 nat water CobD no no MALFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWIL AGNGETESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTG LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMR RQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRI LIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNVLTGIAPAD MALFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWIL AGNGETESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTG LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMR RQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRI LIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNVLTGIAPAD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Salmonella Escherichia sample cobD 28901 Salmonella enterica 562 Escherichia coli 1 2.47 50.29 VAPOR DIFFUSION, HANGING DROP 6.5 ammonium phosphate, KCl, glycerol, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K 277.0 repository Initial release Version format compliance Derived calculations Version format compliance Atomic model 1 0 2002-05-01 1 1 2008-04-28 1 2 2011-07-13 1 3 2011-11-16 2002-05-01 SPRSDE this is more refined structure of 1KUS SEQUENCE According to the authors, the GenBank entry is in error because the original DNA sequence had some errors. The electron density also supports it. The new sequence is Gln25, Ser30, Val42, Arg44 and Ala45. Arg44 lacks side chain density. The organism name in this GenBank entry is Salmonella typhimurium. Salmonella typhimurium has been changed to Salmonella enterica. Therefore, the two names are same. RCSB Y RCSB 2002-04-24 REL REL PO4 PHOSPHATE ION PLP PYRIDOXAL-5'-PHOSPHATE EDO 1,2-ETHANEDIOL HOH water PO4 700 2 PO4 PO4 700 A PLP 800 3 PLP PLP 800 A EG 701 4 EDO EDO 701 A EG 702 4 EDO EDO 702 A HOH 801 5 HOH HOH 801 A HOH 802 5 HOH HOH 802 A HOH 803 5 HOH HOH 803 A HOH 804 5 HOH HOH 804 A HOH 805 5 HOH HOH 805 A HOH 806 5 HOH HOH 806 A HOH 808 5 HOH HOH 808 A HOH 809 5 HOH HOH 809 A HOH 810 5 HOH HOH 810 A HOH 811 5 HOH HOH 811 A HOH 812 5 HOH HOH 812 A HOH 813 5 HOH HOH 813 A HOH 814 5 HOH HOH 814 A HOH 816 5 HOH HOH 816 A HOH 817 5 HOH HOH 817 A HOH 819 5 HOH HOH 819 A HOH 820 5 HOH HOH 820 A HOH 821 5 HOH HOH 821 A HOH 822 5 HOH HOH 822 A HOH 823 5 HOH HOH 823 A HOH 824 5 HOH HOH 824 A HOH 825 5 HOH HOH 825 A HOH 826 5 HOH HOH 826 A HOH 827 5 HOH HOH 827 A HOH 828 5 HOH HOH 828 A HOH 829 5 HOH HOH 829 A HOH 830 5 HOH HOH 830 A HOH 831 5 HOH HOH 831 A HOH 832 5 HOH HOH 832 A HOH 833 5 HOH HOH 833 A HOH 835 5 HOH HOH 835 A HOH 836 5 HOH HOH 836 A HOH 837 5 HOH HOH 837 A HOH 838 5 HOH HOH 838 A HOH 839 5 HOH HOH 839 A HOH 840 5 HOH HOH 840 A HOH 842 5 HOH HOH 842 A HOH 843 5 HOH HOH 843 A HOH 844 5 HOH HOH 844 A HOH 845 5 HOH HOH 845 A HOH 846 5 HOH HOH 846 A HOH 847 5 HOH HOH 847 A HOH 848 5 HOH HOH 848 A HOH 849 5 HOH HOH 849 A HOH 850 5 HOH HOH 850 A HOH 851 5 HOH HOH 851 A HOH 852 5 HOH HOH 852 A HOH 853 5 HOH HOH 853 A HOH 854 5 HOH HOH 854 A HOH 855 5 HOH HOH 855 A HOH 856 5 HOH HOH 856 A HOH 857 5 HOH HOH 857 A HOH 858 5 HOH HOH 858 A HOH 859 5 HOH HOH 859 A HOH 860 5 HOH HOH 860 A HOH 861 5 HOH HOH 861 A HOH 862 5 HOH HOH 862 A HOH 863 5 HOH HOH 863 A HOH 864 5 HOH HOH 864 A HOH 865 5 HOH HOH 865 A HOH 866 5 HOH HOH 866 A HOH 867 5 HOH HOH 867 A HOH 868 5 HOH HOH 868 A HOH 869 5 HOH HOH 869 A HOH 870 5 HOH HOH 870 A HOH 871 5 HOH HOH 871 A HOH 872 5 HOH HOH 872 A HOH 873 5 HOH HOH 873 A HOH 874 5 HOH HOH 874 A HOH 875 5 HOH HOH 875 A HOH 876 5 HOH HOH 876 A HOH 877 5 HOH HOH 877 A HOH 878 5 HOH HOH 878 A HOH 879 5 HOH HOH 879 A HOH 880 5 HOH HOH 880 A HOH 881 5 HOH HOH 881 A HOH 882 5 HOH HOH 882 A HOH 883 5 HOH HOH 883 A HOH 884 5 HOH HOH 884 A HOH 885 5 HOH HOH 885 A HOH 886 5 HOH HOH 886 A HOH 887 5 HOH HOH 887 A HOH 888 5 HOH HOH 888 A HOH 889 5 HOH HOH 889 A HOH 890 5 HOH HOH 890 A HOH 891 5 HOH HOH 891 A HOH 892 5 HOH HOH 892 A HOH 893 5 HOH HOH 893 A HOH 894 5 HOH HOH 894 A HOH 895 5 HOH HOH 895 A HOH 896 5 HOH HOH 896 A HOH 897 5 HOH HOH 897 A HOH 898 5 HOH HOH 898 A HOH 899 5 HOH HOH 899 A HOH 900 5 HOH HOH 900 A HOH 901 5 HOH HOH 901 A HOH 902 5 HOH HOH 902 A HOH 903 5 HOH HOH 903 A HOH 904 5 HOH HOH 904 A HOH 905 5 HOH HOH 905 A HOH 906 5 HOH HOH 906 A HOH 907 5 HOH HOH 907 A HOH 908 5 HOH HOH 908 A HOH 909 5 HOH HOH 909 A HOH 910 5 HOH HOH 910 A HOH 911 5 HOH HOH 911 A HOH 912 5 HOH HOH 912 A HOH 913 5 HOH HOH 913 A HOH 914 5 HOH HOH 914 A HOH 915 5 HOH HOH 915 A HOH 916 5 HOH HOH 916 A HOH 917 5 HOH HOH 917 A HOH 918 5 HOH HOH 918 A HOH 919 5 HOH HOH 919 A HOH 920 5 HOH HOH 920 A HOH 921 5 HOH HOH 921 A HOH 922 5 HOH HOH 922 A HOH 923 5 HOH HOH 923 A HOH 924 5 HOH HOH 924 A HOH 925 5 HOH HOH 925 A HOH 926 5 HOH HOH 926 A HOH 927 5 HOH HOH 927 A HOH 928 5 HOH HOH 928 A HOH 929 5 HOH HOH 929 A HOH 930 5 HOH HOH 930 A HOH 931 5 HOH HOH 931 A HOH 933 5 HOH HOH 933 A HOH 934 5 HOH HOH 934 A HOH 935 5 HOH HOH 935 A HOH 936 5 HOH HOH 936 A HOH 937 5 HOH HOH 937 A HOH 938 5 HOH HOH 938 A HOH 939 5 HOH HOH 939 A HOH 940 5 HOH HOH 940 A HOH 941 5 HOH HOH 941 A HOH 942 5 HOH HOH 942 A HOH 943 5 HOH HOH 943 A HOH 944 5 HOH HOH 944 A HOH 945 5 HOH HOH 945 A HOH 946 5 HOH HOH 946 A HOH 947 5 HOH HOH 947 A HOH 948 5 HOH HOH 948 A HOH 949 5 HOH HOH 949 A HOH 950 5 HOH HOH 950 A HOH 951 5 HOH HOH 951 A HOH 952 5 HOH HOH 952 A HOH 953 5 HOH HOH 953 A HOH 954 5 HOH HOH 954 A HOH 955 5 HOH HOH 955 A HOH 956 5 HOH HOH 956 A HOH 957 5 HOH HOH 957 A HOH 958 5 HOH HOH 958 A HOH 959 5 HOH HOH 959 A HOH 960 5 HOH HOH 960 A HOH 961 5 HOH HOH 961 A HOH 962 5 HOH HOH 962 A HOH 963 5 HOH HOH 963 A HOH 964 5 HOH HOH 964 A HOH 1200 5 HOH HOH 1200 A HOH 1201 5 HOH HOH 1201 A HOH 1202 5 HOH HOH 1202 A HOH 1203 5 HOH HOH 1203 A HOH 1204 5 HOH HOH 1204 A HOH 1206 5 HOH HOH 1206 A HOH 1207 5 HOH HOH 1207 A HOH 1210 5 HOH HOH 1210 A HOH 1211 5 HOH HOH 1211 A HOH 1212 5 HOH HOH 1212 A HOH 1213 5 HOH HOH 1213 A HOH 1214 5 HOH HOH 1214 A HOH 1215 5 HOH HOH 1215 A HOH 1250 5 HOH HOH 1250 A HOH 1301 5 HOH HOH 1301 A HOH 1302 5 HOH HOH 1302 A HOH 1303 5 HOH HOH 1303 A HOH 1306 5 HOH HOH 1306 A HOH 1307 5 HOH HOH 1307 A HOH 1308 5 HOH HOH 1308 A HOH 1309 5 HOH HOH 1309 A HOH 1310 5 HOH HOH 1310 A HOH 1311 5 HOH HOH 1311 A HOH 1312 5 HOH HOH 1312 A HOH 1313 5 HOH HOH 1313 A HOH 1315 5 HOH HOH 1315 A HOH 1316 5 HOH HOH 1316 A HOH 1317 5 HOH HOH 1317 A HOH 1319 5 HOH HOH 1319 A HOH 1320 5 HOH HOH 1320 A HOH 1321 5 HOH HOH 1321 A HOH 1323 5 HOH HOH 1323 A HOH 1324 5 HOH HOH 1324 A HOH 1325 5 HOH HOH 1325 A HOH 1326 5 HOH HOH 1326 A HOH 1327 5 HOH HOH 1327 A HOH 1328 5 HOH HOH 1328 A HOH 1329 5 HOH HOH 1329 A HOH 1330 5 HOH HOH 1330 A HOH 1331 5 HOH HOH 1331 A HOH 1332 5 HOH HOH 1332 A HOH 1333 5 HOH HOH 1333 A HOH 1334 5 HOH HOH 1334 A HOH 1335 5 HOH HOH 1335 A HOH 1336 5 HOH HOH 1336 A HOH 1337 5 HOH HOH 1337 A HOH 1338 5 HOH HOH 1338 A HOH 1339 5 HOH HOH 1339 A HOH 1340 5 HOH HOH 1340 A HOH 1341 5 HOH HOH 1341 A HOH 1342 5 HOH HOH 1342 A HOH 1343 5 HOH HOH 1343 A HOH 1345 5 HOH HOH 1345 A HOH 1346 5 HOH HOH 1346 A HOH 1347 5 HOH HOH 1347 A HOH 1348 5 HOH HOH 1348 A HOH 1349 5 HOH HOH 1349 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A HIS 8 n 8 HIS 8 A GLY 9 n 9 GLY 9 A GLY 10 n 10 GLY 10 A ALA 11 n 11 ASN 11 A ILE 12 n 12 ILE 12 A ALA 13 n 13 ARG 13 A ALA 14 n 14 GLU 14 A ALA 15 n 15 PRO 15 A ALA 16 n 16 ALA 16 A THR 17 n 17 THR 17 A VAL 18 n 18 VAL 18 A LEU 19 n 19 LEU 19 A GLY 20 n 20 GLY 20 A ILE 21 n 21 ILE 21 A SER 22 n 22 SER 22 A PRO 23 n 23 PRO 23 A ASP 24 n 24 ASP 24 A GLN 25 n 25 GLN 25 A LEU 26 n 26 LEU 26 A LEU 27 n 27 LEU 27 A ASP 28 n 28 ASP 28 A PHE 29 n 29 PHE 29 A SER 30 n 30 SER 30 A ALA 31 n 31 ALA 31 A ASN 32 n 32 ASN 32 A ILE 33 n 33 ILE 33 A ASN 34 n 34 ASN 34 A PRO 35 n 35 PRO 35 A ALA 36 n 36 LEU 36 A GLY 37 n 37 GLY 37 A MET 38 n 38 MET 38 A PRO 39 n 39 PRO 39 A VAL 40 n 40 VAL 40 A SER 41 n 41 SER 41 A VAL 42 n 42 VAL 42 A LYS 43 n 43 LYS 43 A ALA 44 n 44 ARG 44 A ALA 45 n 45 ALA 45 A LEU 46 n 46 LEU 46 A ILE 47 n 47 ILE 47 A ASP 48 n 48 ASP 48 A ASN 49 n 49 ASN 49 A LEU 50 n 50 LEU 50 A ASP 51 n 51 ASP 51 A CYS 52 n 52 CYS 52 A ILE 53 n 53 ILE 53 A GLU 54 n 54 GLU 54 A ARG 55 n 55 ARG 55 A TYR 56 n 56 TYR 56 A PRO 57 n 57 PRO 57 A ASP 58 n 58 ASP 58 A ALA 59 n 59 ALA 59 A ASP 60 n 60 ASP 60 A TYR 61 n 61 TYR 61 A PHE 62 n 62 PHE 62 A HIS 63 n 63 HIS 63 A LEU 64 n 64 LEU 64 A HIS 65 n 65 HIS 65 A GLN 66 n 66 GLN 66 A ALA 67 n 67 ALA 67 A LEU 68 n 68 LEU 68 A ALA 69 n 69 ALA 69 A ARG 70 n 70 ARG 70 A HIS 71 n 71 HIS 71 A HIS 72 n 72 HIS 72 A GLN 73 n 73 GLN 73 A VAL 74 n 74 VAL 74 A PRO 75 n 75 PRO 75 A ALA 76 n 76 ALA 76 A SER 77 n 77 SER 77 A TRP 78 n 78 TRP 78 A ILE 79 n 79 ILE 79 A LEU 80 n 80 LEU 80 A ALA 81 n 81 ALA 81 A GLY 82 n 82 GLY 82 A ASN 83 n 83 ASN 83 A GLY 84 n 84 GLY 84 A GLU 85 n 85 GLU 85 A THR 86 n 86 THR 86 A GLU 87 n 87 GLU 87 A SER 88 n 88 SER 88 A ILE 89 n 89 ILE 89 A PHE 90 n 90 PHE 90 A THR 91 n 91 THR 91 A VAL 92 n 92 VAL 92 A ALA 93 n 93 ALA 93 A SER 94 n 94 SER 94 A GLY 95 n 95 GLY 95 A LEU 96 n 96 LEU 96 A ALA 97 n 97 LYS 97 A PRO 98 n 98 PRO 98 A ARG 99 n 99 ARG 99 A ARG 100 n 100 ARG 100 A ALA 101 n 101 ALA 101 A MET 102 n 102 MET 102 A ILE 103 n 103 ILE 103 A VAL 104 n 104 VAL 104 A THR 105 n 105 THR 105 A PRO 106 n 106 PRO 106 A GLY 107 n 107 GLY 107 A PHE 108 n 108 PHE 108 A ALA 109 n 109 ALA 109 A GLU 110 n 110 GLU 110 A TYR 111 n 111 TYR 111 A GLY 112 n 112 GLY 112 A ARG 113 n 113 ARG 113 A ALA 114 n 114 ALA 114 A LEU 115 n 115 LEU 115 A ALA 116 n 116 ALA 116 A GLN 117 n 117 GLN 117 A SER 118 n 118 SER 118 A GLY 119 n 119 GLY 119 A CYS 120 n 120 CYS 120 A GLU 121 n 121 GLU 121 A ILE 122 n 122 ILE 122 A ARG 123 n 123 ARG 123 A ARG 124 n 124 ARG 124 A TRP 125 n 125 TRP 125 A SER 126 n 126 SER 126 A LEU 127 n 127 LEU 127 A ARG 128 n 128 ARG 128 A GLU 129 n 129 GLU 129 A ALA 130 n 130 ALA 130 A ASP 131 n 131 ASP 131 A GLY 132 n 132 GLY 132 A TRP 133 n 133 TRP 133 A GLN 134 n 134 GLN 134 A LEU 135 n 135 LEU 135 A THR 136 n 136 THR 136 A ASP 137 n 137 ASP 137 A ALA 138 n 138 ALA 138 A ILE 139 n 139 ILE 139 A LEU 140 n 140 LEU 140 A ALA 141 n 141 GLU 141 A ALA 142 n 142 ALA 142 A LEU 143 n 143 LEU 143 A THR 144 n 144 THR 144 A PRO 145 n 145 PRO 145 A ASP 146 n 146 ASP 146 A LEU 147 n 147 LEU 147 A ASP 148 n 148 ASP 148 A CYS 149 n 149 CYS 149 A LEU 150 n 150 LEU 150 A PHE 151 n 151 PHE 151 A LEU 152 n 152 LEU 152 A CYS 153 n 153 CYS 153 A THR 154 n 154 THR 154 A PRO 155 n 155 PRO 155 A ASN 156 n 156 ASN 156 A ASN 157 n 157 ASN 157 A PRO 158 n 158 PRO 158 A THR 159 n 159 THR 159 A GLY 160 n 160 GLY 160 A LEU 161 n 161 LEU 161 A LEU 162 n 162 LEU 162 A PRO 163 n 163 PRO 163 A GLU 164 n 164 GLU 164 A ARG 165 n 165 ARG 165 A PRO 166 n 166 PRO 166 A LEU 167 n 167 LEU 167 A LEU 168 n 168 LEU 168 A GLN 169 n 169 GLN 169 A ALA 170 n 170 ALA 170 A ILE 171 n 171 ILE 171 A ALA 172 n 172 ALA 172 A ASP 173 n 173 ASP 173 A ARG 174 n 174 ARG 174 A CYS 175 n 175 CYS 175 A LYS 176 n 176 LYS 176 A SER 177 n 177 SER 177 A LEU 178 n 178 LEU 178 A ALA 179 n 179 ASN 179 A ILE 180 n 180 ILE 180 A ASN 181 n 181 ASN 181 A LEU 182 n 182 LEU 182 A ILE 183 n 183 ILE 183 A LEU 184 n 184 LEU 184 A ASP 185 n 185 ASP 185 A GLU 186 n 186 GLU 186 A ALA 187 n 187 ALA 187 A PHE 188 n 188 PHE 188 A ILE 189 n 189 ILE 189 A ASP 190 n 190 ASP 190 A PHE 191 n 191 PHE 191 A ILE 192 n 192 ILE 192 A PRO 193 n 193 PRO 193 A HIS 194 n 194 HIS 194 A GLU 195 n 195 GLU 195 A THR 196 n 196 THR 196 A GLY 197 n 197 GLY 197 A PHE 198 n 198 PHE 198 A ILE 199 n 199 ILE 199 A PRO 200 n 200 PRO 200 A ALA 201 n 201 ALA 201 A LEU 202 n 202 LEU 202 A ALA 203 n 203 LYS 203 A ALA 204 n 204 ASP 204 A ASN 205 n 205 ASN 205 A PRO 206 n 206 PRO 206 A HIS 207 n 207 HIS 207 A ILE 208 n 208 ILE 208 A TRP 209 n 209 TRP 209 A VAL 210 n 210 VAL 210 A LEU 211 n 211 LEU 211 A ARG 212 n 212 ARG 212 A SER 213 n 213 SER 213 A LEU 214 n 214 LEU 214 A THR 215 n 215 THR 215 A LYS 216 n 216 LYS 216 A PHE 217 n 217 PHE 217 A TYR 218 n 218 TYR 218 A ALA 219 n 219 ALA 219 A ILE 220 n 220 ILE 220 A PRO 221 n 221 PRO 221 A GLY 222 n 222 GLY 222 A LEU 223 n 223 LEU 223 A ARG 224 n 224 ARG 224 A LEU 225 n 225 LEU 225 A GLY 226 n 226 GLY 226 A TYR 227 n 227 TYR 227 A LEU 228 n 228 LEU 228 A VAL 229 n 229 VAL 229 A ASN 230 n 230 ASN 230 A SER 231 n 231 SER 231 A ASP 232 n 232 ASP 232 A ASP 233 n 233 ASP 233 A ALA 234 n 234 ALA 234 A ALA 235 n 235 ALA 235 A MET 236 n 236 MET 236 A ALA 237 n 237 ALA 237 A ARG 238 n 238 ARG 238 A MET 239 n 239 MET 239 A ARG 240 n 240 ARG 240 A ARG 241 n 241 ARG 241 A ALA 242 n 242 GLN 242 A ALA 243 n 243 GLN 243 A MET 244 n 244 MET 244 A PRO 245 n 245 PRO 245 A TRP 246 n 246 TRP 246 A SER 247 n 247 SER 247 A VAL 248 n 248 VAL 248 A ASN 249 n 249 ASN 249 A ALA 250 n 250 ALA 250 A LEU 251 n 251 LEU 251 A ALA 252 n 252 ALA 252 A ALA 253 n 253 ALA 253 A LEU 254 n 254 LEU 254 A ALA 255 n 255 ALA 255 A GLY 256 n 256 GLY 256 A GLU 257 n 257 GLU 257 A VAL 258 n 258 VAL 258 A ALA 259 n 259 ALA 259 A LEU 260 n 260 LEU 260 A GLN 261 n 261 GLN 261 A ASP 262 n 262 ASP 262 A ALA 263 n 263 SER 263 A ALA 264 n 264 ALA 264 A TRP 265 n 265 TRP 265 A GLN 266 n 266 GLN 266 A GLN 267 n 267 GLN 267 A ALA 268 n 268 ALA 268 A THR 269 n 269 THR 269 A TRP 270 n 270 TRP 270 A HIS 271 n 271 HIS 271 A TRP 272 n 272 TRP 272 A LEU 273 n 273 LEU 273 A ARG 274 n 274 ARG 274 A GLU 275 n 275 GLU 275 A GLU 276 n 276 GLU 276 A GLY 277 n 277 GLY 277 A ALA 278 n 278 ALA 278 A ALA 279 n 279 ARG 279 A PHE 280 n 280 PHE 280 A TYR 281 n 281 TYR 281 A GLN 282 n 282 GLN 282 A ALA 283 n 283 ALA 283 A LEU 284 n 284 LEU 284 A CYS 285 n 285 CYS 285 A ALA 286 n 286 GLN 286 A LEU 287 n 287 LEU 287 A PRO 288 n 288 PRO 288 A LEU 289 n 289 LEU 289 A LEU 290 n 290 LEU 290 A THR 291 n 291 THR 291 A VAL 292 n 292 VAL 292 A TYR 293 n 293 TYR 293 A PRO 294 n 294 PRO 294 A GLY 295 n 295 GLY 295 A ARG 296 n 296 ARG 296 A ALA 297 n 297 ALA 297 A ASN 298 n 298 ASN 298 A TYR 299 n 299 TYR 299 A LEU 300 n 300 LEU 300 A LEU 301 n 301 LEU 301 A LEU 302 n 302 LEU 302 A ARG 303 n 303 ARG 303 A CYS 304 n 304 CYS 304 A GLU 305 n 305 GLU 305 A ARG 306 n 306 ARG 306 A ALA 307 n 307 GLU 307 A ASP 308 n 308 ASP 308 A ILE 309 n 309 ILE 309 A ASP 310 n 310 ASP 310 A LEU 311 n 311 LEU 311 A GLN 312 n 312 GLN 312 A ALA 313 n 313 ARG 313 A ARG 314 n 314 ARG 314 A LEU 315 n 315 LEU 315 A LEU 316 n 316 LEU 316 A THR 317 n 317 THR 317 A GLN 318 n 318 GLN 318 A ARG 319 n 319 ARG 319 A ILE 320 n 320 ILE 320 A LEU 321 n 321 LEU 321 A ILE 322 n 322 ILE 322 A ARG 323 n 323 ARG 323 A SER 324 n 324 SER 324 A CYS 325 n 325 CYS 325 A ALA 326 n 326 ALA 326 A ASN 327 n 327 ASN 327 A TYR 328 n 328 TYR 328 A PRO 329 n 329 PRO 329 A GLY 330 n 330 GLY 330 A LEU 331 n 331 LEU 331 A ASP 332 n 332 ASP 332 A SER 333 n 333 SER 333 A ARG 334 n 334 ARG 334 A TYR 335 n 335 TYR 335 A TYR 336 n 336 TYR 336 A ARG 337 n 337 ARG 337 A VAL 338 n 338 VAL 338 A ALA 339 n 339 ALA 339 A ILE 340 n 340 ILE 340 A ARG 341 n 341 ARG 341 A SER 342 n 342 SER 342 A ALA 343 n 343 ALA 343 A ALA 344 n 344 ALA 344 A GLN 345 n 345 GLN 345 A ASN 346 n 346 ASN 346 A GLU 347 n 347 GLU 347 A ARG 348 n 348 ARG 348 A LEU 349 n 349 LEU 349 A LEU 350 n 350 LEU 350 A ALA 351 n 351 ALA 351 A ALA 352 n 352 ALA 352 A LEU 353 n 353 LEU 353 A ARG 354 n 354 ARG 354 A ASN 355 n 355 ASN 355 A VAL 356 n 356 VAL 356 A LEU 357 n 357 LEU 357 A THR 358 n 358 THR 358 A GLY 359 n 359 GLY 359 A ILE 360 n 360 ILE 360 A ALA 361 n 361 ALA 361 A PRO 362 n 362 PRO 362 A n 363 363 A n 364 364 A author_and_software_defined_assembly PISA,PQS 2 dimeric 6210 -33 26350 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_656 -x+1,y,-z+1 crystal symmetry operation 67.9600000000 0.0000000000 117.2300000000 A N LEU 27 A N LEU 27 A O LEU 321 A O LEU 321 A N GLY 82 A N GLY 82 A O GLY 226 A O GLY 226 A O TYR 227 A O TYR 227 A N ARG 212 A N ARG 212 A O TRP 209 A O TRP 209 A N LEU 184 A N LEU 184 A O ASP 185 A O ASP 185 A N LEU 152 A N LEU 152 A O CYS 149 A O CYS 149 A N MET 102 A N MET 102 A N ALA 101 A N ALA 101 A O ARG 123 A O ARG 123 A N THR 291 A N THR 291 A O ARG 303 A O ARG 303 A N LEU 302 A N LEU 302 A O TYR 336 A O TYR 336 A O ARG 337 A O ARG 337 A N ARG 323 A N ARG 323 1 A HOH 1324 F HOH 1 A CG ASN 11 A CG ASN 11 1 Y 1 A OD1 ASN 11 A OD1 ASN 11 1 Y 1 A ND2 ASN 11 A ND2 ASN 11 1 Y 1 A CG ARG 13 A CG ARG 13 1 Y 1 A CD ARG 13 A CD ARG 13 1 Y 1 A NE ARG 13 A NE ARG 13 1 Y 1 A CZ ARG 13 A CZ ARG 13 1 Y 1 A NH1 ARG 13 A NH1 ARG 13 1 Y 1 A NH2 ARG 13 A NH2 ARG 13 1 Y 1 A CG GLU 14 A CG GLU 14 1 Y 1 A CD GLU 14 A CD GLU 14 1 Y 1 A OE1 GLU 14 A OE1 GLU 14 1 Y 1 A OE2 GLU 14 A OE2 GLU 14 1 Y 1 A CG PRO 15 A CG PRO 15 1 Y 1 A CD PRO 15 A CD PRO 15 1 Y 1 A CG LEU 36 A CG LEU 36 1 Y 1 A CD1 LEU 36 A CD1 LEU 36 1 Y 1 A CD2 LEU 36 A CD2 LEU 36 1 Y 1 A CG ARG 44 A CG ARG 44 1 Y 1 A CD ARG 44 A CD ARG 44 1 Y 1 A NE ARG 44 A NE ARG 44 1 Y 1 A CZ ARG 44 A CZ ARG 44 1 Y 1 A NH1 ARG 44 A NH1 ARG 44 1 Y 1 A NH2 ARG 44 A NH2 ARG 44 1 Y 1 A CG LYS 97 A CG LYS 97 1 Y 1 A CD LYS 97 A CD LYS 97 1 Y 1 A CE LYS 97 A CE LYS 97 1 Y 1 A NZ LYS 97 A NZ LYS 97 1 Y 1 A CG GLU 141 A CG GLU 141 1 Y 1 A CD GLU 141 A CD GLU 141 1 Y 1 A OE1 GLU 141 A OE1 GLU 141 1 Y 1 A OE2 GLU 141 A OE2 GLU 141 1 Y 1 A CG ASN 179 A CG ASN 179 1 Y 1 A OD1 ASN 179 A OD1 ASN 179 1 Y 1 A ND2 ASN 179 A ND2 ASN 179 1 Y 1 A CG LYS 203 A CG LYS 203 1 Y 1 A CD LYS 203 A CD LYS 203 1 Y 1 A CE LYS 203 A CE LYS 203 1 Y 1 A NZ LYS 203 A NZ LYS 203 1 Y 1 A CG ASP 204 A CG ASP 204 1 Y 1 A OD1 ASP 204 A OD1 ASP 204 1 Y 1 A OD2 ASP 204 A OD2 ASP 204 1 Y 1 A CG GLN 242 A CG GLN 242 1 Y 1 A CD GLN 242 A CD GLN 242 1 Y 1 A OE1 GLN 242 A OE1 GLN 242 1 Y 1 A NE2 GLN 242 A NE2 GLN 242 1 Y 1 A CG GLN 243 A CG GLN 243 1 Y 1 A CD GLN 243 A CD GLN 243 1 Y 1 A OE1 GLN 243 A OE1 GLN 243 1 Y 1 A NE2 GLN 243 A NE2 GLN 243 1 Y 1 A OG SER 263 A OG SER 263 1 Y 1 A CG ARG 279 A CG ARG 279 1 Y 1 A CD ARG 279 A CD ARG 279 1 Y 1 A NE ARG 279 A NE ARG 279 1 Y 1 A CZ ARG 279 A CZ ARG 279 1 Y 1 A NH1 ARG 279 A NH1 ARG 279 1 Y 1 A NH2 ARG 279 A NH2 ARG 279 1 Y 1 A CG GLN 286 A CG GLN 286 1 Y 1 A CD GLN 286 A CD GLN 286 1 Y 1 A OE1 GLN 286 A OE1 GLN 286 1 Y 1 A NE2 GLN 286 A NE2 GLN 286 1 Y 1 A CG GLU 307 A CG GLU 307 1 Y 1 A CD GLU 307 A CD GLU 307 1 Y 1 A OE1 GLU 307 A OE1 GLU 307 1 Y 1 A OE2 GLU 307 A OE2 GLU 307 1 Y 1 A CG ARG 313 A CG ARG 313 1 Y 1 A CD ARG 313 A CD ARG 313 1 Y 1 A NE ARG 313 A NE ARG 313 1 Y 1 A CZ ARG 313 A CZ ARG 313 1 Y 1 A NH1 ARG 313 A NH1 ARG 313 1 Y 1 A NH2 ARG 313 A NH2 ARG 313 1 Y 1 A MET 1 A MET 1 1 Y 1 A ALA 2 A ALA 2 1 Y 1 A LEU 3 A LEU 3 1 Y 1 A PHE 4 A PHE 4 1 Y 1 A ASN 5 A ASN 5 1 Y 1 A THR 6 A THR 6 1 Y 1 A ALA 7 A ALA 7 1 Y 1 A ALA 363 A ALA 363 1 Y 1 A ASP 364 A ASP 364 1 Y 1 A A OD1 O2 ASP EDO 190 701 2.14 1 A TYR 111 0.061 SIDE CHAIN 1 3.40 0.50 120.30 123.70 A A A NE CZ NH1 ARG ARG ARG 238 238 238 N 1 -3.76 0.50 120.30 116.54 A A A NE CZ NH2 ARG ARG ARG 238 238 238 N 1 A ASN 32 -116.32 72.03 1 A ARG 224 67.19 91.75 1 A GLU 275 -85.71 -79.90 1 A ALA 297 -118.74 -149.74 1 A ASN 298 -89.43 41.59 1 A SER 333 -55.94 -9.95 1 A ARG 341 -122.20 -141.33 protein_rep.param protein.top water_rep.param water.top pi.para pi.topo plplys.para plplys.topo -8.597 0.000 0.000 0.128 0.000 8.469 0.236 0.203 1.8 30.0 1899 37844 99.6 random 1 0 MAD Engh & Huber 56.0846 0.362921 1.8 30.0 215 2981 28 0 2738 0.015 1.68 3.036 1.5 4.779 2.0 3.611 2.0 6.210 2.5 1.86 1.8 30 1LKC 37844 0 0.094 1 37.0 6.7 99.6 0.243 1.80 1.86 1 100 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS L-threonine-O-3-phosphate decarboxylase Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase from Salmonella enterica 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N A ILE 12 A ILE 12 HELX_P A GLY 20 A GLY 20 1 1 9 A SER 22 A SER 22 HELX_P A LEU 26 A LEU 26 5 2 5 A PRO 39 A PRO 39 HELX_P A ASN 49 A ASN 49 1 3 11 A LEU 50 A LEU 50 HELX_P A ARG 55 A ARG 55 5 4 6 A TYR 61 A TYR 61 HELX_P A GLN 73 A GLN 73 1 5 13 A PRO 75 A PRO 75 HELX_P A SER 77 A SER 77 5 6 3 A GLY 84 A GLY 84 HELX_P A LYS 97 A LYS 97 1 7 14 A ALA 109 A ALA 109 HELX_P A SER 118 A SER 118 1 8 10 A ARG 128 A ARG 128 HELX_P A GLY 132 A GLY 132 5 9 5 A ASP 137 A ASP 137 HELX_P A LEU 143 A LEU 143 1 10 7 A GLU 164 A GLU 164 HELX_P A LEU 178 A LEU 178 1 11 15 A PHE 188 A PHE 188 HELX_P A ILE 192 A ILE 192 5 12 5 A PHE 198 A PHE 198 HELX_P A LEU 202 A LEU 202 5 13 5 A ASP 232 A ASP 232 HELX_P A GLN 243 A GLN 243 1 14 12 A ASN 249 A ASN 249 HELX_P A LEU 260 A LEU 260 1 15 12 A ALA 264 A ALA 264 HELX_P A LEU 287 A LEU 287 1 16 24 A ASP 310 A ASP 310 HELX_P A GLN 318 A GLN 318 1 17 9 A SER 342 A SER 342 HELX_P A THR 358 A THR 358 1 18 17 covale 1.310 A LYS 216 A NZ LYS 216 1_555 A PLP 800 C C4A PLP 1_555 LYASE CobD, L-threonine-O-3-phosphate, 1-amino-2-propanol-phosphate, PLP, decarboxylase, cobalamin, LYASE A THR 105 A THR 105 1 A PRO 106 A PRO 106 -0.43 A THR 154 A THR 154 1 A PRO 155 A PRO 155 -0.11 A ASN 157 A ASN 157 1 A PRO 158 A PRO 158 2.40 COBD_SALTY UNP 1 1 P97084 MALFNTAHGGNIREPATVLGISPDHLLDFTANINPLGMPVSLKPPLIDNLDCIERYPDADYFHLHQALARHHQVPASWIL AGNGETESIFTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTG LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMR RQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRI LIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNVLTGIAPAD 1 364 1LKC 1 364 P97084 A 1 1 364 1 HIS SEE REMARK 999 GLN 25 1LKC A P97084 UNP 25 25 1 THR SEE REMARK 999 SER 30 1LKC A P97084 UNP 30 30 1 LEU SEE REMARK 999 VAL 42 1LKC A P97084 UNP 42 42 1 PRO SEE REMARK 999 ARG 44 1LKC A P97084 UNP 44 44 1 PRO SEE REMARK 999 ALA 45 1LKC A P97084 UNP 45 45 2 7 4 parallel anti-parallel anti-parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel A LEU 27 A LEU 27 A ASP 28 A ASP 28 A ILE 320 A ILE 320 A LEU 321 A LEU 321 A ILE 79 A ILE 79 A GLY 82 A GLY 82 A GLY 226 A GLY 226 A VAL 229 A VAL 229 A ILE 208 A ILE 208 A SER 213 A SER 213 A ASN 181 A ASN 181 A ASP 185 A ASP 185 A CYS 149 A CYS 149 A CYS 153 A CYS 153 A ARG 100 A ARG 100 A THR 105 A THR 105 A GLU 121 A GLU 121 A SER 126 A SER 126 A LEU 290 A LEU 290 A VAL 292 A VAL 292 A TYR 299 A TYR 299 A CYS 304 A CYS 304 A TYR 335 A TYR 335 A ALA 339 A ALA 339 A ARG 323 A ARG 323 A SER 324 A SER 324 BINDING SITE FOR RESIDUE PO4 A 700 Software 8 BINDING SITE FOR RESIDUE PLP A 800 Software 14 BINDING SITE FOR RESIDUE EDO A 701 Software 6 BINDING SITE FOR RESIDUE EDO A 702 Software 6 A HIS 8 A HIS 8 8 1_555 A GLY 9 A GLY 9 8 1_555 A ASN 157 A ASN 157 8 1_555 A ARG 323 A ARG 323 8 1_555 A TYR 328 A TYR 328 8 1_555 A ARG 337 A ARG 337 8 1_555 A HOH 858 F HOH 8 1_555 A HOH 917 F HOH 8 1_555 A TYR 56 A TYR 56 14 3_656 A GLY 84 A GLY 84 14 1_555 A GLU 85 A GLU 85 14 1_555 A THR 86 A THR 86 14 1_555 A PHE 108 A PHE 108 14 1_555 A CYS 153 A CYS 153 14 1_555 A ASN 157 A ASN 157 14 1_555 A ASP 185 A ASP 185 14 1_555 A ALA 187 A ALA 187 14 1_555 A PHE 188 A PHE 188 14 1_555 A SER 213 A SER 213 14 1_555 A THR 215 A THR 215 14 1_555 A LYS 216 A LYS 216 14 1_555 A ARG 224 A ARG 224 14 1_555 A ASP 190 A ASP 190 6 1_555 A ARG 212 A ARG 212 6 1_555 A SER 213 A SER 213 6 1_555 A TYR 227 A TYR 227 6 1_555 A HOH 820 F HOH 6 1_555 A HOH 822 F HOH 6 1_555 A LEU 152 A LEU 152 6 1_555 A CYS 153 A CYS 153 6 1_555 A ASN 156 A ASN 156 6 1_555 A PRO 163 A PRO 163 6 1_555 A HOH 809 F HOH 6 1_555 A HOH 1201 F HOH 6 1_555 23 I 2 2 2