0.012217
0.000000
0.000000
0.000000
0.022148
0.000000
0.000000
0.000000
0.037467
0.00000
0.00000
0.00000
Tong, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
81.850
45.150
26.690
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C9 H12 N O6 P
261.168
n
O-PHOSPHOTYROSINE
PHOSPHONOTYROSINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
256
601
610
10.1006/jmbi.1996.0112
8604142
Crystal structures of the human p56lck SH2 domain in complex with two short phosphotyrosyl peptides at 1.0 A and 1.8 A resolution.
1996
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
11872.214
HUMAN P56 TYROSINE KINASE
SH2
1
man
polymer
602.485
PHOSPHOTYROSYL PEPTIDE AC-PTYR-GLU-GLU-GLY
1
man
polymer
18.015
water
138
nat
water
no
no
EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGL
HELVRHYTNASDGLCTRLSRPCQT
EPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGL
HELVRHYTNASDGLCTRLSRPCQT
A
polypeptide(L)
no
yes
(ACE)(PTR)EEG
XYEEG
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
1.99
38.15
repository
Initial release
Version format compliance
Version format compliance
1
0
1996-03-08
1
1
2008-03-03
1
2
2011-07-13
Y
1995-11-10
REL
HOH
water
HOH
301
3
HOH
HOH
301
A
HOH
302
3
HOH
HOH
302
A
HOH
303
3
HOH
HOH
303
A
HOH
304
3
HOH
HOH
304
A
HOH
305
3
HOH
HOH
305
A
HOH
306
3
HOH
HOH
306
A
HOH
307
3
HOH
HOH
307
A
HOH
308
3
HOH
HOH
308
A
HOH
309
3
HOH
HOH
309
A
HOH
310
3
HOH
HOH
310
A
HOH
311
3
HOH
HOH
311
A
HOH
313
3
HOH
HOH
313
A
HOH
314
3
HOH
HOH
314
A
HOH
315
3
HOH
HOH
315
A
HOH
317
3
HOH
HOH
317
A
HOH
318
3
HOH
HOH
318
A
HOH
319
3
HOH
HOH
319
A
HOH
320
3
HOH
HOH
320
A
HOH
321
3
HOH
HOH
321
A
HOH
322
3
HOH
HOH
322
A
HOH
324
3
HOH
HOH
324
A
HOH
325
3
HOH
HOH
325
A
HOH
326
3
HOH
HOH
326
A
HOH
327
3
HOH
HOH
327
A
HOH
329
3
HOH
HOH
329
A
HOH
330
3
HOH
HOH
330
A
HOH
331
3
HOH
HOH
331
A
HOH
332
3
HOH
HOH
332
A
HOH
333
3
HOH
HOH
333
A
HOH
334
3
HOH
HOH
334
A
HOH
335
3
HOH
HOH
335
A
HOH
336
3
HOH
HOH
336
A
HOH
337
3
HOH
HOH
337
A
HOH
338
3
HOH
HOH
338
A
HOH
339
3
HOH
HOH
339
A
HOH
340
3
HOH
HOH
340
A
HOH
341
3
HOH
HOH
341
A
HOH
342
3
HOH
HOH
342
A
HOH
343
3
HOH
HOH
343
A
HOH
345
3
HOH
HOH
345
A
HOH
346
3
HOH
HOH
346
A
HOH
347
3
HOH
HOH
347
A
HOH
348
3
HOH
HOH
348
A
HOH
349
3
HOH
HOH
349
A
HOH
350
3
HOH
HOH
350
A
HOH
351
3
HOH
HOH
351
A
HOH
352
3
HOH
HOH
352
A
HOH
353
3
HOH
HOH
353
A
HOH
354
3
HOH
HOH
354
A
HOH
355
3
HOH
HOH
355
A
HOH
356
3
HOH
HOH
356
A
HOH
357
3
HOH
HOH
357
A
HOH
358
3
HOH
HOH
358
A
HOH
359
3
HOH
HOH
359
A
HOH
360
3
HOH
HOH
360
A
HOH
361
3
HOH
HOH
361
A
HOH
362
3
HOH
HOH
362
A
HOH
364
3
HOH
HOH
364
A
HOH
365
3
HOH
HOH
365
A
HOH
366
3
HOH
HOH
366
A
HOH
367
3
HOH
HOH
367
A
HOH
368
3
HOH
HOH
368
A
HOH
369
3
HOH
HOH
369
A
HOH
370
3
HOH
HOH
370
A
HOH
371
3
HOH
HOH
371
A
HOH
372
3
HOH
HOH
372
A
HOH
373
3
HOH
HOH
373
A
HOH
374
3
HOH
HOH
374
A
HOH
375
3
HOH
HOH
375
A
HOH
376
3
HOH
HOH
376
A
HOH
377
3
HOH
HOH
377
A
HOH
378
3
HOH
HOH
378
A
HOH
379
3
HOH
HOH
379
A
HOH
380
3
HOH
HOH
380
A
HOH
382
3
HOH
HOH
382
A
HOH
383
3
HOH
HOH
383
A
HOH
384
3
HOH
HOH
384
A
HOH
385
3
HOH
HOH
385
A
HOH
386
3
HOH
HOH
386
A
HOH
387
3
HOH
HOH
387
A
HOH
389
3
HOH
HOH
389
A
HOH
390
3
HOH
HOH
390
A
HOH
391
3
HOH
HOH
391
A
HOH
392
3
HOH
HOH
392
A
HOH
393
3
HOH
HOH
393
A
HOH
394
3
HOH
HOH
394
A
HOH
395
3
HOH
HOH
395
A
HOH
396
3
HOH
HOH
396
A
HOH
398
3
HOH
HOH
398
A
HOH
399
3
HOH
HOH
399
A
HOH
400
3
HOH
HOH
400
A
HOH
401
3
HOH
HOH
401
A
HOH
402
3
HOH
HOH
402
A
HOH
403
3
HOH
HOH
403
A
HOH
404
3
HOH
HOH
404
A
HOH
405
3
HOH
HOH
405
A
HOH
406
3
HOH
HOH
406
A
HOH
407
3
HOH
HOH
407
A
HOH
408
3
HOH
HOH
408
A
HOH
409
3
HOH
HOH
409
A
HOH
410
3
HOH
HOH
410
A
HOH
411
3
HOH
HOH
411
A
HOH
413
3
HOH
HOH
413
A
HOH
414
3
HOH
HOH
414
A
HOH
415
3
HOH
HOH
415
A
HOH
416
3
HOH
HOH
416
A
HOH
417
3
HOH
HOH
417
A
HOH
418
3
HOH
HOH
418
A
HOH
419
3
HOH
HOH
419
A
HOH
420
3
HOH
HOH
420
A
HOH
421
3
HOH
HOH
421
A
HOH
422
3
HOH
HOH
422
A
HOH
423
3
HOH
HOH
423
A
HOH
424
3
HOH
HOH
424
A
HOH
425
3
HOH
HOH
425
A
HOH
426
3
HOH
HOH
426
A
HOH
427
3
HOH
HOH
427
A
HOH
428
3
HOH
HOH
428
A
HOH
429
3
HOH
HOH
429
A
HOH
430
3
HOH
HOH
430
A
HOH
431
3
HOH
HOH
431
A
HOH
432
3
HOH
HOH
432
A
HOH
433
3
HOH
HOH
433
A
HOH
434
3
HOH
HOH
434
A
HOH
435
3
HOH
HOH
435
A
HOH
436
3
HOH
HOH
436
A
HOH
437
3
HOH
HOH
437
A
HOH
438
3
HOH
HOH
438
A
HOH
312
3
HOH
HOH
312
B
HOH
316
3
HOH
HOH
316
B
HOH
323
3
HOH
HOH
323
B
HOH
328
3
HOH
HOH
328
B
HOH
344
3
HOH
HOH
344
B
HOH
363
3
HOH
HOH
363
B
HOH
381
3
HOH
HOH
381
B
HOH
388
3
HOH
HOH
388
B
HOH
397
3
HOH
HOH
397
B
HOH
412
3
HOH
HOH
412
B
GLU
123
n
1
GLU
123
A
PRO
124
n
2
PRO
124
A
GLU
125
n
3
GLU
125
A
PRO
126
n
4
PRO
126
A
TRP
127
n
5
TRP
127
A
PHE
128
n
6
PHE
128
A
PHE
129
n
7
PHE
129
A
LYS
130
n
8
LYS
130
A
ASN
131
n
9
ASN
131
A
LEU
132
n
10
LEU
132
A
SER
133
n
11
SER
133
A
ARG
134
n
12
ARG
134
A
LYS
135
n
13
LYS
135
A
ASP
136
n
14
ASP
136
A
ALA
137
n
15
ALA
137
A
GLU
138
n
16
GLU
138
A
ARG
139
n
17
ARG
139
A
GLN
140
n
18
GLN
140
A
LEU
141
n
19
LEU
141
A
LEU
142
n
20
LEU
142
A
ALA
143
n
21
ALA
143
A
PRO
144
n
22
PRO
144
A
GLY
145
n
23
GLY
145
A
ASN
146
n
24
ASN
146
A
THR
147
n
25
THR
147
A
HIS
148
n
26
HIS
148
A
GLY
149
n
27
GLY
149
A
SER
150
n
28
SER
150
A
PHE
151
n
29
PHE
151
A
LEU
152
n
30
LEU
152
A
ILE
153
n
31
ILE
153
A
ARG
154
n
32
ARG
154
A
GLU
155
n
33
GLU
155
A
SER
156
n
34
SER
156
A
GLU
157
n
35
GLU
157
A
SER
158
n
36
SER
158
A
THR
159
n
37
THR
159
A
ALA
160
n
38
ALA
160
A
GLY
161
n
39
GLY
161
A
SER
162
n
40
SER
162
A
PHE
163
n
41
PHE
163
A
SER
164
n
42
SER
164
A
LEU
165
n
43
LEU
165
A
SER
166
n
44
SER
166
A
VAL
167
n
45
VAL
167
A
ARG
168
n
46
ARG
168
A
ASP
169
n
47
ASP
169
A
PHE
170
n
48
PHE
170
A
ASP
171
n
49
ASP
171
A
GLN
172
n
50
GLN
172
A
ASN
173
n
51
ASN
173
A
GLN
174
n
52
GLN
174
A
GLY
175
n
53
GLY
175
A
GLU
176
n
54
GLU
176
A
VAL
177
n
55
VAL
177
A
VAL
178
n
56
VAL
178
A
LYS
179
n
57
LYS
179
A
HIS
180
n
58
HIS
180
A
TYR
181
n
59
TYR
181
A
LYS
182
n
60
LYS
182
A
ILE
183
n
61
ILE
183
A
ARG
184
n
62
ARG
184
A
ASN
185
n
63
ASN
185
A
LEU
186
n
64
LEU
186
A
ASP
187
n
65
ASP
187
A
ASN
188
n
66
ASN
188
A
GLY
189
n
67
GLY
189
A
GLY
190
n
68
GLY
190
A
PHE
191
n
69
PHE
191
A
TYR
192
n
70
TYR
192
A
ILE
193
n
71
ILE
193
A
SER
194
n
72
SER
194
A
PRO
195
n
73
PRO
195
A
ARG
196
n
74
ARG
196
A
ILE
197
n
75
ILE
197
A
THR
198
n
76
THR
198
A
PHE
199
n
77
PHE
199
A
PRO
200
n
78
PRO
200
A
GLY
201
n
79
GLY
201
A
LEU
202
n
80
LEU
202
A
HIS
203
n
81
HIS
203
A
GLU
204
n
82
GLU
204
A
LEU
205
n
83
LEU
205
A
VAL
206
n
84
VAL
206
A
ARG
207
n
85
ARG
207
A
HIS
208
n
86
HIS
208
A
TYR
209
n
87
TYR
209
A
THR
210
n
88
THR
210
A
ASN
211
n
89
ASN
211
A
ALA
212
n
90
ALA
212
A
SER
213
n
91
SER
213
A
ASP
214
n
92
ASP
214
A
GLY
215
n
93
GLY
215
A
LEU
216
n
94
LEU
216
A
CYS
217
n
95
CYS
217
A
THR
218
n
96
THR
218
A
ARG
219
n
97
ARG
219
A
LEU
220
n
98
LEU
220
A
SER
221
n
99
SER
221
A
ARG
222
n
100
ARG
222
A
PRO
223
n
101
PRO
223
A
CYS
224
n
102
CYS
224
A
GLN
225
n
103
GLN
225
A
THR
226
n
104
THR
226
A
ACE
251
n
1
ACE
251
B
PTR
252
n
2
PTR
252
B
GLU
253
n
3
GLU
253
B
GLU
254
n
4
GLU
254
B
GLY
255
n
5
GLY
255
B
author_and_software_defined_assembly
PISA
2
dimeric
1080
-4
6140
B
PTR
252
O-PHOSPHOTYROSINE
B
PTR
2
TYR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
152
A
O
LEU
30
A
N
SER
166
A
N
SER
44
A
O
PHE
163
A
O
PHE
41
A
N
ILE
183
A
N
ILE
61
1
A
ASP
214
33.76
54.30
1
A
SER
221
-101.08
-91.40
0.1890000
0.1890000
1.8
6.0
9173
1
2.0
1.8
6.0
138
1018
0
0
880
0.009
1.5
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
HUMAN P56 TYROSINE KINASE, PHOSPHOTYROSYL PEPTIDE AC-PTYR-GLU-GLU-GLY, PHOSPHONO GROUP
HUMAN P56-LCK TYROSINE KINASE SH2 DOMAIN IN COMPLEX WITH THE PHOSPHOTYROSYL PEPTIDE AC-PTYR-GLU-GLU-GLY (PYEEG PEPTIDE)
1
N
N
2
N
N
3
N
N
3
N
N
A
ARG
134
A
ARG
12
HELX_P
A
LEU
141
A
LEU
19
1
1
8
A
LEU
202
A
LEU
80
HELX_P
A
ASN
211
A
ASN
89
1
2
10
covale
1.327
B
ACE
251
B
C
ACE
1
1_555
B
PTR
252
B
N
PTR
2
1_555
covale
1.325
B
PTR
252
B
C
PTR
2
1_555
B
GLU
253
B
N
GLU
3
1_555
COMPLEX (TYROSINE KINASE/PEPTIDE)
COMPLEX (TYROSINE KINASE-PEPTIDE), COMPLEX (TYROSINE KINASE-PEPTIDE) complex
LCK_HUMAN
UNP
1
1
P06239
GCGCSSHPEDDWMENIDVCENCHYPIVPLDGKGTLLIRNGSEVRDPLVTYEGSNPPASPLQDNLVIALHSYEPSHDGDLG
FEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAG
SFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQTQKPQKPWWEDEWEVP
RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN
GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK
FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP
EDRPTFDYLRSVLEDFFTATEGQYQPQP
1LKL
PDB
2
1LKL
122
225
1LKL
123
226
P06239
A
1
1
104
251
255
1LKL
251
255
1LKL
B
2
1
5
3
anti-parallel
anti-parallel
A
PHE
151
A
PHE
29
A
GLU
155
A
GLU
33
A
PHE
163
A
PHE
41
A
ASP
171
A
ASP
49
A
GLY
175
A
GLY
53
A
ILE
183
A
ILE
61
19
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