0.026918
0.000000
0.001034
0.000000
0.014514
0.000000
0.000000
0.000000
0.017622
0.00000
0.00000
0.00000
Lim, W.A.
Hodel, A.
Sauer, R.T.
Richards, F.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
92.20
90.00
37.150
68.900
56.790
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
N
C
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
Y
90
N
C
N
91
N
N
Y
92
N
N
Y
93
N
C
Y
94
N
N
Y
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
N
C
N
121
R
C
N
122
N
N
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
C
N
150
R
C
N
151
N
O
N
152
S
C
N
153
N
O
N
154
N
C
N
155
R
C
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
C
N
164
N
N
N
165
N
N
Y
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
C
N
187
R
C
N
188
N
O
N
189
S
C
N
190
N
O
N
191
N
C
N
192
R
C
N
193
N
N
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
S
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
N
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
N
343
N
C
N
344
N
S
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
R
C
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
N
440
N
O
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
N
N
454
S
C
N
455
N
C
N
456
N
O
N
457
N
C
N
458
N
C
N
459
N
C
N
460
N
O
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
Y
432
N
doub
Y
433
N
sing
Y
434
N
sing
N
435
N
sing
Y
436
N
doub
N
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
doub
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
91
423
427
10.1073/pnas.91.1.423
8278404
The crystal structure of a mutant protein with altered but improved hydrophobic core packing.
1994
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
227
177
Refined 1.8 Angstrom Crystal Structure of the Lambda Repressor-Operator Complex
1992
10.2210/pdb1lli/pdb
pdb_00001lli
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
x-ray
1
1.0
6158.004
DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3')
1
syn
polymer
6108.967
DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3')
1
syn
polymer
10146.629
PROTEIN (LAMBDA REPRESSOR)
2
man
polymer
18.015
water
92
nat
water
MUTANT V36L,M40L,V47I
no
no
(DA)(DA)(DT)(DA)(DC)(DC)(DA)(DC)(DT)(DG)(DG)(DC)(DG)(DG)(DT)(DG)(DA)(DT)(DA)(DT)
AATACCACTGGCGGTGATAT
D
polydeoxyribonucleotide
no
no
(DT)(DA)(DT)(DA)(DT)(DC)(DA)(DC)(DC)(DG)(DC)(DC)(DA)(DG)(DT)(DG)(DG)(DT)(DA)(DT)
TATATCACCGCCAGTGGTAT
E
polydeoxyribonucleotide
no
no
STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESLADKLGMGQSGIGALFNGINALNAYNAALLAKILKVSVEEFSPSI
AREIYEMYEAVS
STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESLADKLGMGQSGIGALFNGINALNAYNAALLAKILKVSVEEFSPSI
AREIYEMYEAVS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lambda-like viruses
Escherichia
sample
10710
Enterobacteria phage lambda
562
Escherichia coli
2.20
44.06
-3.798
1
20
D
2
E
20
2.606
D_DA2:DT20_E
1
-19.176
0.047
0.090
-0.200
0.382
1
20
D
3
E
19
6.166
D_DT3:DA19_E
2
-8.622
-0.023
0.041
-0.086
-3.266
1
20
D
4
E
18
5.273
D_DA4:DT18_E
3
-12.816
0.345
0.174
-0.202
-0.286
1
19
D
5
E
17
2.561
D_DC5:DG17_E
4
-18.730
0.533
0.050
-0.251
-8.286
1
19
D
6
E
16
-3.441
D_DC6:DG16_E
5
-8.030
-0.110
0.149
-0.391
7.213
1
20
D
7
E
15
0.209
D_DA7:DT15_E
6
-11.144
-0.031
0.328
-0.387
-1.737
1
19
D
8
E
14
-0.258
D_DC8:DG14_E
7
-12.966
0.202
0.252
-0.028
-0.658
1
20
D
9
E
13
-3.700
D_DT9:DA13_E
8
-15.034
-0.238
-0.181
-0.294
-0.967
1
19
D
10
E
12
-5.204
D_DG10:DC12_E
9
-7.700
0.025
0.015
-0.428
2.763
1
19
D
11
E
11
-2.191
D_DG11:DC11_E
10
-12.630
0.185
0.285
-0.378
-0.775
1
19
D
12
E
10
-5.733
D_DC12:DG10_E
11
-18.141
0.136
0.201
-0.365
-2.929
1
19
D
13
E
9
-1.837
D_DG13:DC9_E
12
-0.723
-0.379
-0.293
-0.248
-2.391
1
19
D
14
E
8
-0.793
D_DG14:DC8_E
13
-9.266
-0.223
-0.047
-0.486
-3.336
1
20
D
15
E
7
1.137
D_DT15:DA7_E
14
-5.820
0.245
-0.011
-0.017
7.648
1
19
D
16
E
6
0.430
D_DG16:DC6_E
15
-9.160
-0.130
-0.142
-0.348
0.818
1
20
D
17
E
5
3.767
D_DA17:DT5_E
16
-11.583
-0.325
0.202
-0.065
5.782
1
20
D
18
E
4
3.355
D_DT18:DA4_E
17
-14.572
-0.214
0.249
-0.203
-2.286
1
20
D
19
E
3
5.015
D_DA19:DT3_E
18
-15.752
0.175
0.299
-0.224
-0.117
1
20
D
20
E
2
-1.410
D_DT20:DA2_E
19
-16.202
0.108
0.034
-0.205
3.229
29.747
D
D
2
3
0.996
E
E
20
19
3.211
0.511
0.516
-0.667
DD_DA2DT3:DA19DT20_EE
1
2.265
-4.417
29.658
-1.405
-0.538
3.333
42.561
D
D
3
4
3.380
E
E
19
18
3.344
2.451
-0.081
-0.111
DD_DT3DA4:DT18DA19_EE
2
-2.134
2.943
42.443
-0.405
-0.109
3.307
33.178
D
D
4
5
-3.552
E
E
18
17
3.289
-2.027
-0.799
-0.348
DD_DA4DC5:DG17DT18_EE
3
-0.129
0.227
33.117
-0.267
1.378
3.565
30.261
D
D
5
6
7.203
E
E
17
16
3.606
3.751
0.068
-0.121
DD_DC5DC6:DG16DG17_EE
4
0.607
-1.165
30.027
-1.067
0.005
3.134
33.607
D
D
6
7
9.530
E
E
16
15
3.028
5.487
0.086
0.906
DD_DC6DA7:DT15DG16_EE
5
0.670
-1.165
33.162
0.715
-0.045
3.508
34.719
D
D
7
8
7.443
E
E
15
14
3.651
4.430
0.567
-0.979
DD_DA7DC8:DG14DT15_EE
6
0.416
-0.699
34.441
-2.385
-0.880
3.072
31.450
D
D
8
9
7.389
E
E
14
13
3.229
3.979
-0.691
0.067
DD_DC8DT9:DA13DG14_EE
7
4.845
-8.996
30.834
-0.600
2.156
3.363
49.765
D
D
9
10
-1.693
E
E
13
12
3.417
-1.424
-0.075
1.950
DD_DT9DG10:DC12DA13_EE
8
-2.269
2.698
49.697
2.425
-0.083
3.452
27.680
D
D
10
11
5.179
E
E
12
11
3.416
2.471
0.149
0.859
DD_DG10DG11:DC11DC12_EE
9
-2.508
5.256
27.459
1.165
-0.953
3.415
39.277
D
D
11
12
-4.767
E
E
11
10
3.418
-3.200
-1.069
0.457
DD_DG11DC12:DG10DC11_EE
10
-1.786
2.661
39.113
1.078
1.368
3.699
34.924
D
D
12
13
-7.913
E
E
10
9
3.628
-4.720
1.827
0.896
DD_DC12DG13:DC9DG10_EE
11
5.045
-8.458
34.255
2.300
-2.181
3.206
23.261
D
D
13
14
11.620
E
E
9
8
3.527
4.651
0.581
-1.046
DD_DG13DG14:DC8DC9_EE
12
-1.547
3.864
22.746
-4.260
-1.994
3.372
35.432
D
D
14
15
7.690
E
E
8
7
3.534
4.667
-0.629
-0.994
DD_DG14DT15:DA7DC8_EE
13
0.339
-0.558
35.132
-2.359
1.086
2.963
33.091
D
D
15
16
21.417
E
E
7
6
3.069
11.926
-0.202
0.325
DD_DT15DG16:DC6DA7_EE
14
2.558
-4.594
30.819
-1.355
0.768
3.443
38.152
D
D
16
17
-3.986
E
E
6
5
3.453
-2.603
0.348
-0.111
DD_DG16DA17:DT5DC6_EE
15
-1.066
1.633
38.051
0.177
-0.674
3.273
29.926
D
D
17
18
-3.631
E
E
5
4
3.246
-1.874
0.156
-0.550
DD_DA17DT18:DA4DT5_EE
16
-0.113
0.219
29.868
-0.679
-0.326
3.394
42.621
D
D
18
19
1.758
E
E
4
3
3.394
1.277
-0.177
-0.048
DD_DT18DA19:DT3DA4_EE
17
-0.797
1.097
42.596
-0.200
0.160
3.254
31.725
D
D
19
20
3.833
E
E
3
2
3.317
2.094
-0.506
-0.849
DD_DA19DT20:DA2DT3_EE
18
0.050
-0.092
31.657
-1.940
0.935
struct_conf
struct_conf_type
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Data collection
Database references
1
0
1994-08-31
1
1
2008-05-22
1
2
2011-07-13
1
3
2017-11-29
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
BNL
Y
BNL
1994-03-25
REL
HOH
water
HOH
304
4
HOH
HOH
304
D
HOH
307
4
HOH
HOH
307
D
HOH
319
4
HOH
HOH
319
D
HOH
326
4
HOH
HOH
326
D
HOH
327
4
HOH
HOH
327
D
HOH
339
4
HOH
HOH
339
D
HOH
343
4
HOH
HOH
343
D
HOH
344
4
HOH
HOH
344
D
HOH
345
4
HOH
HOH
345
D
HOH
356
4
HOH
HOH
356
D
HOH
359
4
HOH
HOH
359
D
HOH
363
4
HOH
HOH
363
D
HOH
416
4
HOH
HOH
416
D
HOH
430
4
HOH
HOH
430
D
HOH
434
4
HOH
HOH
434
D
HOH
441
4
HOH
HOH
441
D
HOH
451
4
HOH
HOH
451
D
HOH
455
4
HOH
HOH
455
D
HOH
460
4
HOH
HOH
460
D
HOH
463
4
HOH
HOH
463
D
HOH
469
4
HOH
HOH
469
D
HOH
331
4
HOH
HOH
331
E
HOH
332
4
HOH
HOH
332
E
HOH
334
4
HOH
HOH
334
E
HOH
337
4
HOH
HOH
337
E
HOH
361
4
HOH
HOH
361
E
HOH
362
4
HOH
HOH
362
E
HOH
366
4
HOH
HOH
366
E
HOH
368
4
HOH
HOH
368
E
HOH
401
4
HOH
HOH
401
E
HOH
405
4
HOH
HOH
405
E
HOH
407
4
HOH
HOH
407
E
HOH
414
4
HOH
HOH
414
E
HOH
422
4
HOH
HOH
422
E
HOH
429
4
HOH
HOH
429
E
HOH
442
4
HOH
HOH
442
E
HOH
452
4
HOH
HOH
452
E
HOH
468
4
HOH
HOH
468
E
HOH
478
4
HOH
HOH
478
E
HOH
300
4
HOH
HOH
300
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
305
4
HOH
HOH
305
A
HOH
308
4
HOH
HOH
308
A
HOH
311
4
HOH
HOH
311
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
321
4
HOH
HOH
321
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
328
4
HOH
HOH
328
A
HOH
330
4
HOH
HOH
330
A
HOH
333
4
HOH
HOH
333
A
HOH
340
4
HOH
HOH
340
A
HOH
341
4
HOH
HOH
341
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
404
4
HOH
HOH
404
A
HOH
410
4
HOH
HOH
410
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
427
4
HOH
HOH
427
A
HOH
436
4
HOH
HOH
436
A
HOH
444
4
HOH
HOH
444
A
HOH
465
4
HOH
HOH
465
A
HOH
472
4
HOH
HOH
472
A
HOH
474
4
HOH
HOH
474
A
HOH
475
4
HOH
HOH
475
A
HOH
482
4
HOH
HOH
482
A
HOH
301
4
HOH
HOH
301
B
HOH
306
4
HOH
HOH
306
B
HOH
317
4
HOH
HOH
317
B
HOH
320
4
HOH
HOH
320
B
HOH
329
4
HOH
HOH
329
B
HOH
335
4
HOH
HOH
335
B
HOH
346
4
HOH
HOH
346
B
HOH
348
4
HOH
HOH
348
B
HOH
354
4
HOH
HOH
354
B
HOH
357
4
HOH
HOH
357
B
HOH
365
4
HOH
HOH
365
B
HOH
402
4
HOH
HOH
402
B
HOH
408
4
HOH
HOH
408
B
HOH
411
4
HOH
HOH
411
B
HOH
421
4
HOH
HOH
421
B
HOH
423
4
HOH
HOH
423
B
HOH
428
4
HOH
HOH
428
B
HOH
439
4
HOH
HOH
439
B
HOH
445
4
HOH
HOH
445
B
HOH
448
4
HOH
HOH
448
B
HOH
462
4
HOH
HOH
462
B
HOH
480
4
HOH
HOH
480
B
A
1
n
1
DA
1
D
A
2
n
2
DA
2
D
T
3
n
3
DT
3
D
A
4
n
4
DA
4
D
C
5
n
5
DC
5
D
C
6
n
6
DC
6
D
A
7
n
7
DA
7
D
C
8
n
8
DC
8
D
T
9
n
9
DT
9
D
G
10
n
10
DG
10
D
G
11
n
11
DG
11
D
C
12
n
12
DC
12
D
G
13
n
13
DG
13
D
G
14
n
14
DG
14
D
T
15
n
15
DT
15
D
G
16
n
16
DG
16
D
A
17
n
17
DA
17
D
T
18
n
18
DT
18
D
A
19
n
19
DA
19
D
T
20
n
20
DT
20
D
T
1
n
1
DT
1
E
A
2
n
2
DA
2
E
T
3
n
3
DT
3
E
A
4
n
4
DA
4
E
T
5
n
5
DT
5
E
C
6
n
6
DC
6
E
A
7
n
7
DA
7
E
C
8
n
8
DC
8
E
C
9
n
9
DC
9
E
G
10
n
10
DG
10
E
C
11
n
11
DC
11
E
C
12
n
12
DC
12
E
A
13
n
13
DA
13
E
G
14
n
14
DG
14
E
T
15
n
15
DT
15
E
G
16
n
16
DG
16
E
G
17
n
17
DG
17
E
T
18
n
18
DT
18
E
A
19
n
19
DA
19
E
T
20
n
20
DT
20
E
n
1
1
A
n
2
2
A
n
3
3
A
LYS
4
n
4
LYS
4
A
LYS
5
n
5
LYS
5
A
PRO
6
n
6
PRO
6
A
LEU
7
n
7
LEU
7
A
THR
8
n
8
THR
8
A
GLN
9
n
9
GLN
9
A
GLU
10
n
10
GLU
10
A
GLN
11
n
11
GLN
11
A
LEU
12
n
12
LEU
12
A
GLU
13
n
13
GLU
13
A
ASP
14
n
14
ASP
14
A
ALA
15
n
15
ALA
15
A
ARG
16
n
16
ARG
16
A
ARG
17
n
17
ARG
17
A
LEU
18
n
18
LEU
18
A
LYS
19
n
19
LYS
19
A
ALA
20
n
20
ALA
20
A
ILE
21
n
21
ILE
21
A
TYR
22
n
22
TYR
22
A
GLU
23
n
23
GLU
23
A
LYS
24
n
24
LYS
24
A
LYS
25
n
25
LYS
25
A
LYS
26
n
26
LYS
26
A
ASN
27
n
27
ASN
27
A
GLU
28
n
28
GLU
28
A
LEU
29
n
29
LEU
29
A
GLY
30
n
30
GLY
30
A
LEU
31
n
31
LEU
31
A
SER
32
n
32
SER
32
A
GLN
33
n
33
GLN
33
A
GLU
34
n
34
GLU
34
A
SER
35
n
35
SER
35
A
LEU
36
n
36
LEU
36
A
ALA
37
n
37
ALA
37
A
ASP
38
n
38
ASP
38
A
LYS
39
n
39
LYS
39
A
LEU
40
n
40
LEU
40
A
GLY
41
n
41
GLY
41
A
MET
42
n
42
MET
42
A
GLY
43
n
43
GLY
43
A
GLN
44
n
44
GLN
44
A
SER
45
n
45
SER
45
A
GLY
46
n
46
GLY
46
A
ILE
47
n
47
ILE
47
A
GLY
48
n
48
GLY
48
A
ALA
49
n
49
ALA
49
A
LEU
50
n
50
LEU
50
A
PHE
51
n
51
PHE
51
A
ASN
52
n
52
ASN
52
A
GLY
53
n
53
GLY
53
A
ILE
54
n
54
ILE
54
A
ASN
55
n
55
ASN
55
A
ALA
56
n
56
ALA
56
A
LEU
57
n
57
LEU
57
A
ASN
58
n
58
ASN
58
A
ALA
59
n
59
ALA
59
A
TYR
60
n
60
TYR
60
A
ASN
61
n
61
ASN
61
A
ALA
62
n
62
ALA
62
A
ALA
63
n
63
ALA
63
A
LEU
64
n
64
LEU
64
A
LEU
65
n
65
LEU
65
A
ALA
66
n
66
ALA
66
A
LYS
67
n
67
LYS
67
A
ILE
68
n
68
ILE
68
A
LEU
69
n
69
LEU
69
A
LYS
70
n
70
LYS
70
A
VAL
71
n
71
VAL
71
A
SER
72
n
72
SER
72
A
VAL
73
n
73
VAL
73
A
GLU
74
n
74
GLU
74
A
GLU
75
n
75
GLU
75
A
PHE
76
n
76
PHE
76
A
SER
77
n
77
SER
77
A
PRO
78
n
78
PRO
78
A
SER
79
n
79
SER
79
A
ILE
80
n
80
ILE
80
A
ALA
81
n
81
ALA
81
A
ARG
82
n
82
ARG
82
A
GLU
83
n
83
GLU
83
A
ILE
84
n
84
ILE
84
A
TYR
85
n
85
TYR
85
A
GLU
86
n
86
GLU
86
A
MET
87
n
87
MET
87
A
TYR
88
n
88
TYR
88
A
GLU
89
n
89
GLU
89
A
ALA
90
n
90
ALA
90
A
VAL
91
n
91
VAL
91
A
SER
92
n
92
SER
92
A
SER
1
n
1
SER
1
B
THR
2
n
2
THR
2
B
LYS
3
n
3
LYS
3
B
LYS
4
n
4
LYS
4
B
LYS
5
n
5
LYS
5
B
PRO
6
n
6
PRO
6
B
LEU
7
n
7
LEU
7
B
THR
8
n
8
THR
8
B
GLN
9
n
9
GLN
9
B
GLU
10
n
10
GLU
10
B
GLN
11
n
11
GLN
11
B
LEU
12
n
12
LEU
12
B
GLU
13
n
13
GLU
13
B
ASP
14
n
14
ASP
14
B
ALA
15
n
15
ALA
15
B
ARG
16
n
16
ARG
16
B
ARG
17
n
17
ARG
17
B
LEU
18
n
18
LEU
18
B
LYS
19
n
19
LYS
19
B
ALA
20
n
20
ALA
20
B
ILE
21
n
21
ILE
21
B
TYR
22
n
22
TYR
22
B
GLU
23
n
23
GLU
23
B
LYS
24
n
24
LYS
24
B
LYS
25
n
25
LYS
25
B
LYS
26
n
26
LYS
26
B
ASN
27
n
27
ASN
27
B
GLU
28
n
28
GLU
28
B
LEU
29
n
29
LEU
29
B
GLY
30
n
30
GLY
30
B
LEU
31
n
31
LEU
31
B
SER
32
n
32
SER
32
B
GLN
33
n
33
GLN
33
B
GLU
34
n
34
GLU
34
B
SER
35
n
35
SER
35
B
LEU
36
n
36
LEU
36
B
ALA
37
n
37
ALA
37
B
ASP
38
n
38
ASP
38
B
LYS
39
n
39
LYS
39
B
LEU
40
n
40
LEU
40
B
GLY
41
n
41
GLY
41
B
MET
42
n
42
MET
42
B
GLY
43
n
43
GLY
43
B
GLN
44
n
44
GLN
44
B
SER
45
n
45
SER
45
B
GLY
46
n
46
GLY
46
B
ILE
47
n
47
ILE
47
B
GLY
48
n
48
GLY
48
B
ALA
49
n
49
ALA
49
B
LEU
50
n
50
LEU
50
B
PHE
51
n
51
PHE
51
B
ASN
52
n
52
ASN
52
B
GLY
53
n
53
GLY
53
B
ILE
54
n
54
ILE
54
B
ASN
55
n
55
ASN
55
B
ALA
56
n
56
ALA
56
B
LEU
57
n
57
LEU
57
B
ASN
58
n
58
ASN
58
B
ALA
59
n
59
ALA
59
B
TYR
60
n
60
TYR
60
B
ASN
61
n
61
ASN
61
B
ALA
62
n
62
ALA
62
B
ALA
63
n
63
ALA
63
B
LEU
64
n
64
LEU
64
B
LEU
65
n
65
LEU
65
B
ALA
66
n
66
ALA
66
B
LYS
67
n
67
LYS
67
B
ILE
68
n
68
ILE
68
B
LEU
69
n
69
LEU
69
B
LYS
70
n
70
LYS
70
B
VAL
71
n
71
VAL
71
B
SER
72
n
72
SER
72
B
VAL
73
n
73
VAL
73
B
GLU
74
n
74
GLU
74
B
GLU
75
n
75
GLU
75
B
PHE
76
n
76
PHE
76
B
SER
77
n
77
SER
77
B
PRO
78
n
78
PRO
78
B
SER
79
n
79
SER
79
B
ILE
80
n
80
ILE
80
B
ALA
81
n
81
ALA
81
B
ARG
82
n
82
ARG
82
B
GLU
83
n
83
GLU
83
B
ILE
84
n
84
ILE
84
B
TYR
85
n
85
TYR
85
B
GLU
86
n
86
GLU
86
B
MET
87
n
87
MET
87
B
TYR
88
n
88
TYR
88
B
GLU
89
n
89
GLU
89
B
ALA
90
n
90
ALA
90
B
VAL
91
n
91
VAL
91
B
SER
92
n
92
SER
92
B
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
LYS
5
C
CG
LYS
5
1
Y
1
A
CD
LYS
5
C
CD
LYS
5
1
Y
1
A
CE
LYS
5
C
CE
LYS
5
1
Y
1
A
NZ
LYS
5
C
NZ
LYS
5
1
Y
1
A
SER
1
C
SER
1
1
Y
1
A
THR
2
C
THR
2
1
Y
1
A
LYS
3
C
LYS
3
1
Y
1
D
DA
1
0.065
SIDE CHAIN
1
D
DA
2
0.054
SIDE CHAIN
1
D
DC
5
0.112
SIDE CHAIN
1
D
DC
6
0.065
SIDE CHAIN
1
D
DA
7
0.062
SIDE CHAIN
1
D
DC
8
0.088
SIDE CHAIN
1
D
DG
10
0.084
SIDE CHAIN
1
D
DG
13
0.081
SIDE CHAIN
1
D
DG
14
0.089
SIDE CHAIN
1
D
DT
15
0.123
SIDE CHAIN
1
D
DT
20
0.095
SIDE CHAIN
1
E
DT
1
0.199
SIDE CHAIN
1
E
DA
4
0.071
SIDE CHAIN
1
E
DT
5
0.095
SIDE CHAIN
1
E
DC
6
0.222
SIDE CHAIN
1
E
DA
7
0.110
SIDE CHAIN
1
E
DC
8
0.114
SIDE CHAIN
1
E
DC
11
0.087
SIDE CHAIN
1
E
DC
12
0.112
SIDE CHAIN
1
E
DA
13
0.087
SIDE CHAIN
1
E
DG
14
0.072
SIDE CHAIN
1
-6.75
0.80
105.90
99.15
D
D
D
O4'
C1'
C2'
DA
DA
DA
1
1
1
N
1
1.94
0.30
108.30
110.24
D
D
D
O4'
C1'
N9
DA
DA
DA
1
1
1
N
1
10.34
1.20
119.70
130.04
D
D
D
C3'
O3'
P
DA
DA
DT
2
2
3
Y
1
-5.10
0.80
105.90
100.80
D
D
D
O4'
C1'
C2'
DT
DT
DT
3
3
3
N
1
-3.91
0.60
123.70
119.79
D
D
D
C5
C6
N1
DT
DT
DT
3
3
3
N
1
8.06
1.20
119.70
127.76
D
D
D
C3'
O3'
P
DT
DT
DA
3
3
4
Y
1
-5.57
0.80
105.90
100.33
D
D
D
O4'
C1'
C2'
DA
DA
DA
4
4
4
N
1
7.52
1.20
119.70
127.22
D
D
D
C3'
O3'
P
DA
DA
DC
4
4
5
Y
1
4.57
0.30
108.30
112.87
D
D
D
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
3.89
0.60
118.90
122.79
D
D
D
N1
C2
O2
DC
DC
DC
5
5
5
N
1
-4.85
0.70
121.90
117.05
D
D
D
N3
C2
O2
DC
DC
DC
5
5
5
N
1
-4.81
0.80
105.90
101.09
D
D
D
O4'
C1'
C2'
DC
DC
DC
6
6
6
N
1
4.08
0.30
108.30
112.38
D
D
D
O4'
C1'
N1
DC
DC
DC
6
6
6
N
1
3.96
0.60
118.90
122.86
D
D
D
N1
C2
O2
DC
DC
DC
6
6
6
N
1
4.39
0.30
108.30
112.69
D
D
D
O4'
C1'
N9
DA
DA
DA
7
7
7
N
1
-6.11
0.40
104.50
98.39
D
D
D
O4'
C4'
C3'
DC
DC
DC
8
8
8
N
1
-10.27
1.00
110.10
99.83
D
D
D
C1'
O4'
C4'
DC
DC
DC
8
8
8
N
1
3.11
0.30
108.30
111.41
D
D
D
O4'
C1'
N1
DC
DC
DC
8
8
8
N
1
4.77
0.30
108.30
113.07
D
D
D
O4'
C1'
N1
DT
DT
DT
9
9
9
N
1
3.93
0.60
118.00
121.93
D
D
D
C4
C5
C6
DT
DT
DT
9
9
9
N
1
-5.36
0.60
122.90
117.54
D
D
D
C6
C5
C7
DT
DT
DT
9
9
9
N
1
-3.01
0.50
128.60
125.59
D
D
D
N3
C4
C5
DG
DG
DG
10
10
10
N
1
-5.21
0.80
105.90
100.69
D
D
D
O4'
C1'
C2'
DG
DG
DG
13
13
13
N
1
3.62
0.30
108.30
111.92
D
D
D
O4'
C1'
N9
DG
DG
DG
13
13
13
N
1
6.74
0.30
108.30
115.04
D
D
D
O4'
C1'
N1
DT
DT
DT
15
15
15
N
1
-5.37
0.80
105.90
100.53
D
D
D
O4'
C1'
C2'
DA
DA
DA
17
17
17
N
1
9.67
1.20
119.70
129.37
D
D
D
C3'
O3'
P
DA
DA
DT
17
17
18
Y
1
-8.28
0.80
105.90
97.62
D
D
D
O4'
C1'
C2'
DT
DT
DT
18
18
18
N
1
3.12
0.30
108.30
111.42
D
D
D
O4'
C1'
N1
DT
DT
DT
18
18
18
N
1
4.17
0.60
118.00
122.17
D
D
D
C4
C5
C6
DT
DT
DT
18
18
18
N
1
-6.87
0.60
122.90
116.03
D
D
D
C6
C5
C7
DT
DT
DT
18
18
18
N
1
7.37
1.20
119.70
127.07
D
D
D
C3'
O3'
P
DT
DT
DA
18
18
19
Y
1
4.66
0.70
110.30
114.96
D
D
D
C1'
O4'
C4'
DA
DA
DA
19
19
19
N
1
-5.84
0.80
105.90
100.06
D
D
D
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
1
3.88
0.30
108.30
112.18
D
D
D
O4'
C1'
N1
DT
DT
DT
20
20
20
N
1
4.44
0.60
118.00
122.44
D
D
D
C4
C5
C6
DT
DT
DT
20
20
20
N
1
-5.57
0.60
122.90
117.33
D
D
D
C6
C5
C7
DT
DT
DT
20
20
20
N
1
5.52
0.30
108.30
113.82
E
E
E
O4'
C1'
N1
DT
DT
DT
1
1
1
N
1
-4.09
0.60
122.90
118.81
E
E
E
C6
C5
C7
DT
DT
DT
1
1
1
N
1
6.33
0.30
108.30
114.63
E
E
E
O4'
C1'
N9
DA
DA
DA
2
2
2
N
1
9.03
1.20
119.70
128.73
E
E
E
C3'
O3'
P
DA
DA
DT
2
2
3
Y
1
-6.31
0.80
105.90
99.59
E
E
E
O4'
C1'
C2'
DT
DT
DT
3
3
3
N
1
-5.73
0.70
108.00
102.27
E
E
E
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
-5.28
0.80
105.90
100.62
E
E
E
O4'
C1'
C2'
DA
DA
DA
4
4
4
N
1
9.48
1.20
119.70
129.18
E
E
E
C3'
O3'
P
DA
DA
DT
4
4
5
Y
1
-5.82
0.80
105.90
100.08
E
E
E
O4'
C1'
C2'
DT
DT
DT
5
5
5
N
1
2.19
0.30
108.30
110.49
E
E
E
O4'
C1'
N1
DT
DT
DT
5
5
5
N
1
-4.84
0.60
122.90
118.06
E
E
E
C6
C5
C7
DT
DT
DT
5
5
5
N
1
-12.07
1.80
114.10
102.03
E
E
E
C5'
C4'
C3'
DC
DC
DC
6
6
6
N
1
-5.18
0.80
105.90
100.72
E
E
E
O4'
C1'
C2'
DC
DC
DC
6
6
6
N
1
7.29
0.30
108.30
115.59
E
E
E
O4'
C1'
N1
DC
DC
DC
6
6
6
N
1
-7.23
1.00
110.10
102.87
E
E
E
C1'
O4'
C4'
DC
DC
DC
8
8
8
N
1
3.80
0.30
108.30
112.10
E
E
E
O4'
C1'
N1
DC
DC
DC
8
8
8
N
1
4.78
0.30
108.30
113.08
E
E
E
O4'
C1'
N1
DC
DC
DC
9
9
9
N
1
4.57
0.60
118.90
123.47
E
E
E
N1
C2
O2
DC
DC
DC
9
9
9
N
1
7.25
1.20
119.70
126.95
E
E
E
C3'
O3'
P
DC
DC
DC
11
11
12
Y
1
2.47
0.30
108.30
110.77
E
E
E
O4'
C1'
N1
DC
DC
DC
12
12
12
N
1
7.52
1.20
119.70
127.22
E
E
E
C3'
O3'
P
DG
DG
DT
14
14
15
Y
1
-5.21
0.80
105.90
100.69
E
E
E
O4'
C1'
C2'
DT
DT
DT
15
15
15
N
1
3.73
0.60
118.00
121.73
E
E
E
C4
C5
C6
DT
DT
DT
15
15
15
N
1
3.61
0.30
108.30
111.91
E
E
E
O4'
C1'
N9
DG
DG
DG
16
16
16
N
1
-7.29
0.80
105.90
98.61
E
E
E
O4'
C1'
C2'
DG
DG
DG
17
17
17
N
1
-5.39
0.80
105.90
100.51
E
E
E
O4'
C1'
C2'
DT
DT
DT
18
18
18
N
1
3.54
0.30
108.30
111.84
E
E
E
O4'
C1'
N1
DT
DT
DT
18
18
18
N
1
4.96
0.60
119.00
123.96
E
E
E
C4
C5
C7
DT
DT
DT
18
18
18
N
1
-6.07
0.60
122.90
116.83
E
E
E
C6
C5
C7
DT
DT
DT
18
18
18
N
1
-5.87
0.80
105.90
100.03
E
E
E
O4'
C1'
C2'
DT
DT
DT
20
20
20
N
1
4.70
0.60
118.00
122.70
E
E
E
C4
C5
C6
DT
DT
DT
20
20
20
N
1
-6.80
0.60
122.90
116.10
E
E
E
C6
C5
C7
DT
DT
DT
20
20
20
N
1
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
16
16
16
N
1
-4.45
0.50
120.30
115.85
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
16
16
16
N
1
3.18
0.50
120.30
123.48
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
16
16
16
N
1
13.90
2.20
113.40
127.30
B
B
B
CA
CB
CG
ARG
ARG
ARG
82
82
82
N
1
3.36
0.50
120.30
123.66
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
82
82
82
N
1
D
D
C5'
C4'
DA
DA
1
1
0.043
0.007
1.512
1.555
N
1
D
D
C8
N9
DG
DG
13
13
-0.056
0.007
1.374
1.318
N
1
D
D
C5
C7
DT
DT
15
15
0.038
0.006
1.496
1.534
N
1
D
D
N9
C4
DA
DA
17
17
0.036
0.006
1.374
1.410
N
1
E
E
C5'
C4'
DT
DT
1
1
0.044
0.007
1.512
1.556
N
1
E
E
C5
C7
DT
DT
3
3
0.039
0.006
1.496
1.535
N
1
E
E
C5
C7
DT
DT
5
5
0.049
0.006
1.496
1.545
N
1
B
SER
77
-159.17
85.28
0.1960000
0.1960000
2.100
8.000
99.700
1
2.100
8.000
92
2302
0
814
1396
0.015
3.00
refinement
X-PLOR
THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
GLN
9
C
GLN
9
HELX_P
A
LYS
25
C
LYS
25
1
H1
17
A
SER
32
C
SER
32
HELX_P
A
LEU
40
C
LEU
40
1
H2
9
A
GLY
43
C
GLY
43
HELX_P
A
GLY
53
C
GLY
53
1
H3
11
A
ASN
58
C
ASN
58
HELX_P
A
LYS
70
C
LYS
70
1
H4
13
A
SER
72
C
SER
72
HELX_P
A
SER
92
C
SER
92
1
H5
21
B
GLN
9
D
GLN
9
HELX_P
B
LYS
25
D
LYS
25
1
H1
17
B
SER
32
D
SER
32
HELX_P
B
LEU
40
D
LEU
40
1
H2
9
B
GLY
43
D
GLY
43
HELX_P
B
GLY
53
D
GLY
53
1
H3
11
B
ASN
58
D
ASN
58
HELX_P
B
LYS
70
D
LYS
70
1
H4
13
B
SER
72
D
SER
72
HELX_P
B
SER
92
D
SER
92
1
H5
21
hydrog
WATSON-CRICK
D
DA
2
A
N1
DA
2
1_555
E
DT
20
B
N3
DT
20
1_555
hydrog
WATSON-CRICK
D
DA
2
A
N6
DA
2
1_555
E
DT
20
B
O4
DT
20
1_555
hydrog
WATSON-CRICK
D
DT
3
A
N3
DT
3
1_555
E
DA
19
B
N1
DA
19
1_555
hydrog
WATSON-CRICK
D
DT
3
A
O4
DT
3
1_555
E
DA
19
B
N6
DA
19
1_555
hydrog
WATSON-CRICK
D
DA
4
A
N1
DA
4
1_555
E
DT
18
B
N3
DT
18
1_555
hydrog
WATSON-CRICK
D
DA
4
A
N6
DA
4
1_555
E
DT
18
B
O4
DT
18
1_555
hydrog
WATSON-CRICK
D
DC
5
A
N3
DC
5
1_555
E
DG
17
B
N1
DG
17
1_555
hydrog
WATSON-CRICK
D
DC
5
A
N4
DC
5
1_555
E
DG
17
B
O6
DG
17
1_555
hydrog
WATSON-CRICK
D
DC
5
A
O2
DC
5
1_555
E
DG
17
B
N2
DG
17
1_555
hydrog
WATSON-CRICK
D
DC
6
A
N3
DC
6
1_555
E
DG
16
B
N1
DG
16
1_555
hydrog
WATSON-CRICK
D
DC
6
A
N4
DC
6
1_555
E
DG
16
B
O6
DG
16
1_555
hydrog
WATSON-CRICK
D
DC
6
A
O2
DC
6
1_555
E
DG
16
B
N2
DG
16
1_555
hydrog
WATSON-CRICK
D
DA
7
A
N1
DA
7
1_555
E
DT
15
B
N3
DT
15
1_555
hydrog
WATSON-CRICK
D
DA
7
A
N6
DA
7
1_555
E
DT
15
B
O4
DT
15
1_555
hydrog
WATSON-CRICK
D
DC
8
A
N3
DC
8
1_555
E
DG
14
B
N1
DG
14
1_555
hydrog
WATSON-CRICK
D
DC
8
A
N4
DC
8
1_555
E
DG
14
B
O6
DG
14
1_555
hydrog
WATSON-CRICK
D
DC
8
A
O2
DC
8
1_555
E
DG
14
B
N2
DG
14
1_555
hydrog
WATSON-CRICK
D
DT
9
A
N3
DT
9
1_555
E
DA
13
B
N1
DA
13
1_555
hydrog
WATSON-CRICK
D
DT
9
A
O4
DT
9
1_555
E
DA
13
B
N6
DA
13
1_555
hydrog
WATSON-CRICK
D
DG
10
A
N1
DG
10
1_555
E
DC
12
B
N3
DC
12
1_555
hydrog
WATSON-CRICK
D
DG
10
A
N2
DG
10
1_555
E
DC
12
B
O2
DC
12
1_555
hydrog
WATSON-CRICK
D
DG
10
A
O6
DG
10
1_555
E
DC
12
B
N4
DC
12
1_555
hydrog
WATSON-CRICK
D
DG
11
A
N1
DG
11
1_555
E
DC
11
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
D
DG
11
A
N2
DG
11
1_555
E
DC
11
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
D
DG
11
A
O6
DG
11
1_555
E
DC
11
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
D
DC
12
A
N3
DC
12
1_555
E
DG
10
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
D
DC
12
A
N4
DC
12
1_555
E
DG
10
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
D
DC
12
A
O2
DC
12
1_555
E
DG
10
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
D
DG
13
A
N1
DG
13
1_555
E
DC
9
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
D
DG
13
A
N2
DG
13
1_555
E
DC
9
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
D
DG
13
A
O6
DG
13
1_555
E
DC
9
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
D
DG
14
A
N1
DG
14
1_555
E
DC
8
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
D
DG
14
A
N2
DG
14
1_555
E
DC
8
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
D
DG
14
A
O6
DG
14
1_555
E
DC
8
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
D
DT
15
A
N3
DT
15
1_555
E
DA
7
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
D
DT
15
A
O4
DT
15
1_555
E
DA
7
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
D
DG
16
A
N1
DG
16
1_555
E
DC
6
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
D
DG
16
A
N2
DG
16
1_555
E
DC
6
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
D
DG
16
A
O6
DG
16
1_555
E
DC
6
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
D
DA
17
A
N1
DA
17
1_555
E
DT
5
B
N3
DT
5
1_555
hydrog
WATSON-CRICK
D
DA
17
A
N6
DA
17
1_555
E
DT
5
B
O4
DT
5
1_555
hydrog
WATSON-CRICK
D
DT
18
A
N3
DT
18
1_555
E
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
D
DT
18
A
O4
DT
18
1_555
E
DA
4
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
D
DA
19
A
N1
DA
19
1_555
E
DT
3
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
D
DA
19
A
N6
DA
19
1_555
E
DT
3
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
D
DT
20
A
N3
DT
20
1_555
E
DA
2
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
D
DT
20
A
O4
DT
20
1_555
E
DA
2
B
N6
DA
2
1_555
TRANSCRIPTION/DNA
PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX
RPC1_LAMBD
UNP
3
P03034
1LLI
PDB
1
1LLI
1LLI
PDB
2
1LLI
1
92
1LLI
1
92
P03034
A
1
1
92
1
92
1LLI
1
92
P03034
B
1
1
92
1
20
1LLI
1
20
1LLI
D
2
1
20
1
20
1LLI
1
20
1LLI
E
3
1
20
1
VAL
conflict
LEU
36
1LLI
A
P03034
UNP
36
36
1
MET
conflict
LEU
40
1LLI
A
P03034
UNP
40
40
1
VAL
conflict
ILE
47
1LLI
A
P03034
UNP
47
47
2
VAL
conflict
LEU
36
1LLI
B
P03034
UNP
36
36
2
MET
conflict
LEU
40
1LLI
B
P03034
UNP
40
40
2
VAL
conflict
ILE
47
1LLI
B
P03034
UNP
47
47
4
P 1 21 1