0.012427
0.007175
-0.000000
0.000000
0.014349
-0.000000
0.000000
0.000000
0.013122
0.00000
0.00000
0.00000
Kurinov, I.V.
Uckun, F.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
80.47
80.47
76.21
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H18 N2 O2
174.241
n
N-DIMETHYL-LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Biochem.Pharm.
BCPCA6
0725
0006-2952
65
1709
1717
10.1016/S0006-2952(03)00144-8
12754107
High resolution X-ray structure of potent anti-HIV pokeweed antiviral protein-III
2003
US
Protein Sci.
PRCIEI
0795
0961-8368
8
1765
1772
X-Ray Crystallographic Analysis of the Structural Basis for the Interactions of Pokeweed Antiviral Protein
with its Active Site Inhibitor and Ribosomal RNA Substrate Analogs
1999
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
90.0
1
IMAGE PLATE
2001-03-08
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.97
1.0
BL7-1
SSRL
0.97
SYNCHROTRON
SSRL BEAMLINE BL7-1
29683.041
Antiviral Protein 3
3.2.2.22
1
nat
polymer
18.015
water
260
nat
water
PAP-II, Ribosome-inactivating protein, rRNA N-glycosidase
no
yes
NIVFDVENATPETYSNFLTSLREAV(MLY)D(MLY)KLTCHGMIMATTLTEQP(MLY)YVLVDL(MLY)FGSGTFTLAIR
RGNLYLEGYSDIYNGKCRYRIF(MLY)DSESDAQETVCPGDKSKPGTQNNIPYE(MLY)SYKGMESKGGARTKLGLG
(MLY)ITLKSRMG(MLY)IYGKDATDQKQYQKNEAEFLLIAVQMVTEASRF(MLY)YIEN(MLY)V(MLY)AKFDDANGY
QPDP(MLY)AISLEKNWDSVS(MLY)VIAKVGTSGDSTVTLPGDL(MLY)DENNKPWTTATMNDLKNDIMALLTHVTCKV
K
NIVFDVENATPETYSNFLTSLREAVKDKKLTCHGMIMATTLTEQPKYVLVDLKFGSGTFTLAIRRGNLYLEGYSDIYNGK
CRYRIFKDSESDAQETVCPGDKSKPGTQNNIPYEKSYKGMESKGGARTKLGLGKITLKSRMGKIYGKDATDQKQYQKNEA
EFLLIAVQMVTEASRFKYIENKVKAKFDDANGYQPDPKAISLEKNWDSVSKVIAKVGTSGDSTVTLPGDLKDENNKPWTT
ATMNDLKNDIMALLTHVTCKVK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
American pokeweed
late summer leaves
Phytolacca
sample
3527
Phytolacca americana
1
2.30
48.73
VAPOR DIFFUSION, HANGING DROP
9.5
30% PEG400, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K
290
repository
Initial release
Version format compliance
Version format compliance
1
0
2003-06-17
1
1
2008-04-28
1
2
2011-07-13
Low Temperature Structure Of Pokeweed Antiviral Protein, Wild-type isoform (PAP-I)
RCSB
Y
RCSB
2002-04-29
REL
HOH
water
WAT
501
2
HOH
HOH
501
A
WAT
502
2
HOH
HOH
502
A
WAT
503
2
HOH
HOH
503
A
WAT
504
2
HOH
HOH
504
A
WAT
505
2
HOH
HOH
505
A
WAT
506
2
HOH
HOH
506
A
WAT
507
2
HOH
HOH
507
A
WAT
508
2
HOH
HOH
508
A
WAT
509
2
HOH
HOH
509
A
WAT
510
2
HOH
HOH
510
A
WAT
511
2
HOH
HOH
511
A
WAT
512
2
HOH
HOH
512
A
WAT
513
2
HOH
HOH
513
A
WAT
514
2
HOH
HOH
514
A
WAT
515
2
HOH
HOH
515
A
WAT
516
2
HOH
HOH
516
A
WAT
517
2
HOH
HOH
517
A
WAT
518
2
HOH
HOH
518
A
WAT
519
2
HOH
HOH
519
A
WAT
520
2
HOH
HOH
520
A
WAT
521
2
HOH
HOH
521
A
WAT
522
2
HOH
HOH
522
A
WAT
523
2
HOH
HOH
523
A
WAT
524
2
HOH
HOH
524
A
WAT
525
2
HOH
HOH
525
A
WAT
527
2
HOH
HOH
527
A
WAT
528
2
HOH
HOH
528
A
WAT
529
2
HOH
HOH
529
A
WAT
530
2
HOH
HOH
530
A
WAT
531
2
HOH
HOH
531
A
WAT
532
2
HOH
HOH
532
A
WAT
533
2
HOH
HOH
533
A
WAT
534
2
HOH
HOH
534
A
WAT
535
2
HOH
HOH
535
A
WAT
536
2
HOH
HOH
536
A
WAT
537
2
HOH
HOH
537
A
WAT
538
2
HOH
HOH
538
A
WAT
539
2
HOH
HOH
539
A
WAT
540
2
HOH
HOH
540
A
WAT
541
2
HOH
HOH
541
A
WAT
542
2
HOH
HOH
542
A
WAT
543
2
HOH
HOH
543
A
WAT
544
2
HOH
HOH
544
A
WAT
545
2
HOH
HOH
545
A
WAT
546
2
HOH
HOH
546
A
WAT
547
2
HOH
HOH
547
A
WAT
548
2
HOH
HOH
548
A
WAT
549
2
HOH
HOH
549
A
WAT
550
2
HOH
HOH
550
A
WAT
551
2
HOH
HOH
551
A
WAT
552
2
HOH
HOH
552
A
WAT
553
2
HOH
HOH
553
A
WAT
554
2
HOH
HOH
554
A
WAT
555
2
HOH
HOH
555
A
WAT
556
2
HOH
HOH
556
A
WAT
557
2
HOH
HOH
557
A
WAT
558
2
HOH
HOH
558
A
WAT
559
2
HOH
HOH
559
A
WAT
560
2
HOH
HOH
560
A
WAT
561
2
HOH
HOH
561
A
WAT
562
2
HOH
HOH
562
A
WAT
563
2
HOH
HOH
563
A
WAT
564
2
HOH
HOH
564
A
WAT
565
2
HOH
HOH
565
A
WAT
566
2
HOH
HOH
566
A
WAT
567
2
HOH
HOH
567
A
WAT
568
2
HOH
HOH
568
A
WAT
569
2
HOH
HOH
569
A
WAT
570
2
HOH
HOH
570
A
WAT
571
2
HOH
HOH
571
A
WAT
572
2
HOH
HOH
572
A
WAT
573
2
HOH
HOH
573
A
WAT
574
2
HOH
HOH
574
A
WAT
575
2
HOH
HOH
575
A
WAT
576
2
HOH
HOH
576
A
WAT
577
2
HOH
HOH
577
A
WAT
578
2
HOH
HOH
578
A
WAT
579
2
HOH
HOH
579
A
WAT
580
2
HOH
HOH
580
A
WAT
581
2
HOH
HOH
581
A
WAT
582
2
HOH
HOH
582
A
WAT
583
2
HOH
HOH
583
A
WAT
584
2
HOH
HOH
584
A
WAT
585
2
HOH
HOH
585
A
WAT
586
2
HOH
HOH
586
A
WAT
587
2
HOH
HOH
587
A
WAT
588
2
HOH
HOH
588
A
WAT
589
2
HOH
HOH
589
A
WAT
590
2
HOH
HOH
590
A
WAT
591
2
HOH
HOH
591
A
WAT
592
2
HOH
HOH
592
A
WAT
593
2
HOH
HOH
593
A
WAT
594
2
HOH
HOH
594
A
WAT
595
2
HOH
HOH
595
A
WAT
596
2
HOH
HOH
596
A
WAT
597
2
HOH
HOH
597
A
WAT
598
2
HOH
HOH
598
A
WAT
599
2
HOH
HOH
599
A
WAT
600
2
HOH
HOH
600
A
WAT
601
2
HOH
HOH
601
A
WAT
602
2
HOH
HOH
602
A
WAT
603
2
HOH
HOH
603
A
WAT
604
2
HOH
HOH
604
A
WAT
605
2
HOH
HOH
605
A
WAT
606
2
HOH
HOH
606
A
WAT
608
2
HOH
HOH
608
A
WAT
609
2
HOH
HOH
609
A
WAT
610
2
HOH
HOH
610
A
WAT
611
2
HOH
HOH
611
A
WAT
612
2
HOH
HOH
612
A
WAT
613
2
HOH
HOH
613
A
WAT
614
2
HOH
HOH
614
A
WAT
615
2
HOH
HOH
615
A
WAT
616
2
HOH
HOH
616
A
WAT
617
2
HOH
HOH
617
A
WAT
618
2
HOH
HOH
618
A
WAT
619
2
HOH
HOH
619
A
WAT
620
2
HOH
HOH
620
A
WAT
621
2
HOH
HOH
621
A
WAT
622
2
HOH
HOH
622
A
WAT
623
2
HOH
HOH
623
A
WAT
624
2
HOH
HOH
624
A
WAT
625
2
HOH
HOH
625
A
WAT
626
2
HOH
HOH
626
A
WAT
627
2
HOH
HOH
627
A
WAT
628
2
HOH
HOH
628
A
WAT
629
2
HOH
HOH
629
A
WAT
630
2
HOH
HOH
630
A
WAT
631
2
HOH
HOH
631
A
WAT
632
2
HOH
HOH
632
A
WAT
633
2
HOH
HOH
633
A
WAT
634
2
HOH
HOH
634
A
WAT
635
2
HOH
HOH
635
A
WAT
636
2
HOH
HOH
636
A
WAT
637
2
HOH
HOH
637
A
WAT
638
2
HOH
HOH
638
A
WAT
639
2
HOH
HOH
639
A
WAT
640
2
HOH
HOH
640
A
WAT
641
2
HOH
HOH
641
A
WAT
642
2
HOH
HOH
642
A
WAT
643
2
HOH
HOH
643
A
WAT
644
2
HOH
HOH
644
A
WAT
645
2
HOH
HOH
645
A
WAT
646
2
HOH
HOH
646
A
WAT
647
2
HOH
HOH
647
A
WAT
648
2
HOH
HOH
648
A
WAT
649
2
HOH
HOH
649
A
WAT
650
2
HOH
HOH
650
A
WAT
651
2
HOH
HOH
651
A
WAT
652
2
HOH
HOH
652
A
WAT
653
2
HOH
HOH
653
A
WAT
654
2
HOH
HOH
654
A
WAT
655
2
HOH
HOH
655
A
WAT
656
2
HOH
HOH
656
A
WAT
657
2
HOH
HOH
657
A
WAT
658
2
HOH
HOH
658
A
WAT
659
2
HOH
HOH
659
A
WAT
660
2
HOH
HOH
660
A
WAT
661
2
HOH
HOH
661
A
WAT
662
2
HOH
HOH
662
A
WAT
664
2
HOH
HOH
664
A
WAT
665
2
HOH
HOH
665
A
WAT
667
2
HOH
HOH
667
A
WAT
668
2
HOH
HOH
668
A
WAT
669
2
HOH
HOH
669
A
WAT
670
2
HOH
HOH
670
A
WAT
671
2
HOH
HOH
671
A
WAT
672
2
HOH
HOH
672
A
WAT
673
2
HOH
HOH
673
A
WAT
674
2
HOH
HOH
674
A
WAT
675
2
HOH
HOH
675
A
WAT
676
2
HOH
HOH
676
A
WAT
677
2
HOH
HOH
677
A
WAT
678
2
HOH
HOH
678
A
WAT
679
2
HOH
HOH
679
A
WAT
680
2
HOH
HOH
680
A
WAT
681
2
HOH
HOH
681
A
WAT
682
2
HOH
HOH
682
A
WAT
683
2
HOH
HOH
683
A
WAT
684
2
HOH
HOH
684
A
WAT
686
2
HOH
HOH
686
A
WAT
687
2
HOH
HOH
687
A
WAT
688
2
HOH
HOH
688
A
WAT
689
2
HOH
HOH
689
A
WAT
691
2
HOH
HOH
691
A
WAT
693
2
HOH
HOH
693
A
WAT
695
2
HOH
HOH
695
A
WAT
696
2
HOH
HOH
696
A
WAT
697
2
HOH
HOH
697
A
WAT
699
2
HOH
HOH
699
A
WAT
700
2
HOH
HOH
700
A
WAT
701
2
HOH
HOH
701
A
WAT
702
2
HOH
HOH
702
A
WAT
703
2
HOH
HOH
703
A
WAT
704
2
HOH
HOH
704
A
WAT
705
2
HOH
HOH
705
A
WAT
706
2
HOH
HOH
706
A
WAT
707
2
HOH
HOH
707
A
WAT
708
2
HOH
HOH
708
A
WAT
709
2
HOH
HOH
709
A
WAT
710
2
HOH
HOH
710
A
WAT
711
2
HOH
HOH
711
A
WAT
712
2
HOH
HOH
712
A
WAT
713
2
HOH
HOH
713
A
WAT
715
2
HOH
HOH
715
A
WAT
716
2
HOH
HOH
716
A
WAT
717
2
HOH
HOH
717
A
WAT
718
2
HOH
HOH
718
A
WAT
721
2
HOH
HOH
721
A
WAT
722
2
HOH
HOH
722
A
WAT
724
2
HOH
HOH
724
A
WAT
725
2
HOH
HOH
725
A
WAT
726
2
HOH
HOH
726
A
WAT
727
2
HOH
HOH
727
A
WAT
728
2
HOH
HOH
728
A
WAT
730
2
HOH
HOH
730
A
WAT
734
2
HOH
HOH
734
A
WAT
736
2
HOH
HOH
736
A
WAT
737
2
HOH
HOH
737
A
WAT
738
2
HOH
HOH
738
A
WAT
739
2
HOH
HOH
739
A
WAT
744
2
HOH
HOH
744
A
WAT
745
2
HOH
HOH
745
A
WAT
746
2
HOH
HOH
746
A
WAT
749
2
HOH
HOH
749
A
WAT
750
2
HOH
HOH
750
A
WAT
752
2
HOH
HOH
752
A
WAT
753
2
HOH
HOH
753
A
WAT
754
2
HOH
HOH
754
A
WAT
756
2
HOH
HOH
756
A
WAT
757
2
HOH
HOH
757
A
WAT
758
2
HOH
HOH
758
A
WAT
761
2
HOH
HOH
761
A
WAT
762
2
HOH
HOH
762
A
WAT
763
2
HOH
HOH
763
A
WAT
765
2
HOH
HOH
765
A
WAT
767
2
HOH
HOH
767
A
WAT
768
2
HOH
HOH
768
A
WAT
769
2
HOH
HOH
769
A
WAT
770
2
HOH
HOH
770
A
WAT
771
2
HOH
HOH
771
A
WAT
772
2
HOH
HOH
772
A
WAT
773
2
HOH
HOH
773
A
WAT
774
2
HOH
HOH
774
A
WAT
775
2
HOH
HOH
775
A
WAT
776
2
HOH
HOH
776
A
WAT
777
2
HOH
HOH
777
A
WAT
778
2
HOH
HOH
778
A
WAT
779
2
HOH
HOH
779
A
WAT
780
2
HOH
HOH
780
A
WAT
782
2
HOH
HOH
782
A
WAT
783
2
HOH
HOH
783
A
WAT
784
2
HOH
HOH
784
A
WAT
785
2
HOH
HOH
785
A
WAT
786
2
HOH
HOH
786
A
WAT
787
2
HOH
HOH
787
A
WAT
788
2
HOH
HOH
788
A
WAT
789
2
HOH
HOH
789
A
WAT
790
2
HOH
HOH
790
A
WAT
791
2
HOH
HOH
791
A
ASN
1
n
1
ASN
1
A
ILE
2
n
2
ILE
2
A
VAL
3
n
3
VAL
3
A
PHE
4
n
4
PHE
4
A
ASP
5
n
5
ASP
5
A
VAL
6
n
6
VAL
6
A
GLU
7
n
7
GLU
7
A
ASN
8
n
8
ASN
8
A
ALA
9
n
9
ALA
9
A
THR
10
n
10
THR
10
A
PRO
11
n
11
PRO
11
A
GLU
12
n
12
GLU
12
A
THR
13
n
13
THR
13
A
TYR
14
n
14
TYR
14
A
SER
15
n
15
SER
15
A
ASN
16
n
16
ASN
16
A
PHE
17
n
17
PHE
17
A
LEU
18
n
18
LEU
18
A
THR
19
n
19
THR
19
A
SER
20
n
20
SER
20
A
LEU
21
n
21
LEU
21
A
ARG
22
n
22
ARG
22
A
GLU
23
n
23
GLU
23
A
ALA
24
n
24
ALA
24
A
VAL
25
n
25
VAL
25
A
LYS
26
n
26
MLY
26
A
ASP
27
n
27
ASP
27
A
LYS
28
n
28
MLY
28
A
LYS
29
n
29
LYS
29
A
LEU
30
n
30
LEU
30
A
THR
31
n
31
THR
31
A
CYS
32
n
32
CYS
32
A
HIS
33
n
33
HIS
33
A
GLY
34
n
34
GLY
34
A
MET
35
n
35
MET
35
A
ILE
36
n
36
ILE
36
A
MET
37
n
37
MET
37
A
ALA
38
n
38
ALA
38
A
THR
39
n
39
THR
39
A
THR
40
n
40
THR
40
A
LEU
41
n
41
LEU
41
A
THR
42
n
42
THR
42
A
GLU
43
n
43
GLU
43
A
GLN
44
n
44
GLN
44
A
PRO
45
n
45
PRO
45
A
LYS
46
n
46
MLY
46
A
TYR
47
n
47
TYR
47
A
VAL
48
n
48
VAL
48
A
LEU
49
n
49
LEU
49
A
VAL
50
n
50
VAL
50
A
ASP
51
n
51
ASP
51
A
LEU
52
n
52
LEU
52
A
LYS
53
n
53
MLY
53
A
PHE
54
n
54
PHE
54
A
GLY
55
n
55
GLY
55
A
SER
56
n
56
SER
56
A
GLY
57
n
57
GLY
57
A
THR
58
n
58
THR
58
A
PHE
59
n
59
PHE
59
A
THR
60
n
60
THR
60
A
LEU
61
n
61
LEU
61
A
ALA
62
n
62
ALA
62
A
ILE
63
n
63
ILE
63
A
ARG
64
n
64
ARG
64
A
ARG
65
n
65
ARG
65
A
GLY
66
n
66
GLY
66
A
ASN
67
n
67
ASN
67
A
LEU
68
n
68
LEU
68
A
TYR
69
n
69
TYR
69
A
LEU
70
n
70
LEU
70
A
GLU
71
n
71
GLU
71
A
GLY
72
n
72
GLY
72
A
TYR
73
n
73
TYR
73
A
SER
74
n
74
SER
74
A
ASP
75
n
75
ASP
75
A
ILE
76
n
76
ILE
76
A
TYR
77
n
77
TYR
77
A
ASN
78
n
78
ASN
78
A
GLY
79
n
79
GLY
79
A
LYS
80
n
80
LYS
80
A
CYS
81
n
81
CYS
81
A
ARG
82
n
82
ARG
82
A
TYR
83
n
83
TYR
83
A
ARG
84
n
84
ARG
84
A
ILE
85
n
85
ILE
85
A
PHE
86
n
86
PHE
86
A
LYS
87
n
87
MLY
87
A
ASP
88
n
88
ASP
88
A
SER
89
n
89
SER
89
A
GLU
90
n
90
GLU
90
A
SER
91
n
91
SER
91
A
ASP
92
n
92
ASP
92
A
ALA
93
n
93
ALA
93
A
GLN
94
n
94
GLN
94
A
GLU
95
n
95
GLU
95
A
THR
96
n
96
THR
96
A
VAL
97
n
97
VAL
97
A
CYS
98
n
98
CYS
98
A
PRO
99
n
99
PRO
99
A
GLY
100
n
100
GLY
100
A
ASP
101
n
101
ASP
101
A
LYS
102
n
102
LYS
102
A
SER
103
n
103
SER
103
A
LYS
104
n
104
LYS
104
A
PRO
105
n
105
PRO
105
A
GLY
106
n
106
GLY
106
A
THR
107
n
107
THR
107
A
GLN
108
n
108
GLN
108
A
ASN
109
n
109
ASN
109
A
ASN
110
n
110
ASN
110
A
ILE
111
n
111
ILE
111
A
PRO
112
n
112
PRO
112
A
TYR
113
n
113
TYR
113
A
GLU
114
n
114
GLU
114
A
LYS
115
n
115
MLY
115
A
SER
116
n
116
SER
116
A
TYR
117
n
117
TYR
117
A
LYS
118
n
118
LYS
118
A
GLY
119
n
119
GLY
119
A
MET
120
n
120
MET
120
A
GLU
121
n
121
GLU
121
A
SER
122
n
122
SER
122
A
LYS
123
n
123
LYS
123
A
GLY
124
n
124
GLY
124
A
GLY
125
n
125
GLY
125
A
ALA
126
n
126
ALA
126
A
ARG
127
n
127
ARG
127
A
THR
128
n
128
THR
128
A
LYS
129
n
129
LYS
129
A
LEU
130
n
130
LEU
130
A
GLY
131
n
131
GLY
131
A
LEU
132
n
132
LEU
132
A
GLY
133
n
133
GLY
133
A
LYS
134
n
134
MLY
134
A
ILE
135
n
135
ILE
135
A
THR
136
n
136
THR
136
A
LEU
137
n
137
LEU
137
A
LYS
138
n
138
LYS
138
A
SER
139
n
139
SER
139
A
ARG
140
n
140
ARG
140
A
MET
141
n
141
MET
141
A
GLY
142
n
142
GLY
142
A
LYS
143
n
143
MLY
143
A
ILE
144
n
144
ILE
144
A
TYR
145
n
145
TYR
145
A
GLY
146
n
146
GLY
146
A
LYS
147
n
147
LYS
147
A
ASP
148
n
148
ASP
148
A
ALA
149
n
149
ALA
149
A
THR
150
n
150
THR
150
A
ASP
151
n
151
ASP
151
A
GLN
152
n
152
GLN
152
A
LYS
153
n
153
LYS
153
A
GLN
154
n
154
GLN
154
A
TYR
155
n
155
TYR
155
A
GLN
156
n
156
GLN
156
A
LYS
157
n
157
LYS
157
A
ASN
158
n
158
ASN
158
A
GLU
159
n
159
GLU
159
A
ALA
160
n
160
ALA
160
A
GLU
161
n
161
GLU
161
A
PHE
162
n
162
PHE
162
A
LEU
163
n
163
LEU
163
A
LEU
164
n
164
LEU
164
A
ILE
165
n
165
ILE
165
A
ALA
166
n
166
ALA
166
A
VAL
167
n
167
VAL
167
A
GLN
168
n
168
GLN
168
A
MET
169
n
169
MET
169
A
VAL
170
n
170
VAL
170
A
THR
171
n
171
THR
171
A
GLU
172
n
172
GLU
172
A
ALA
173
n
173
ALA
173
A
SER
174
n
174
SER
174
A
ARG
175
n
175
ARG
175
A
PHE
176
n
176
PHE
176
A
LYS
177
n
177
MLY
177
A
TYR
178
n
178
TYR
178
A
ILE
179
n
179
ILE
179
A
GLU
180
n
180
GLU
180
A
ASN
181
n
181
ASN
181
A
LYS
182
n
182
MLY
182
A
VAL
183
n
183
VAL
183
A
LYS
184
n
184
MLY
184
A
ALA
185
n
185
ALA
185
A
LYS
186
n
186
LYS
186
A
PHE
187
n
187
PHE
187
A
ASP
188
n
188
ASP
188
A
ASP
189
n
189
ASP
189
A
ALA
190
n
190
ALA
190
A
ASN
191
n
191
ASN
191
A
GLY
192
n
192
GLY
192
A
TYR
193
n
193
TYR
193
A
GLN
194
n
194
GLN
194
A
PRO
195
n
195
PRO
195
A
ASP
196
n
196
ASP
196
A
PRO
197
n
197
PRO
197
A
LYS
198
n
198
MLY
198
A
ALA
199
n
199
ALA
199
A
ILE
200
n
200
ILE
200
A
SER
201
n
201
SER
201
A
LEU
202
n
202
LEU
202
A
GLU
203
n
203
GLU
203
A
LYS
204
n
204
LYS
204
A
ASN
205
n
205
ASN
205
A
TRP
206
n
206
TRP
206
A
ASP
207
n
207
ASP
207
A
SER
208
n
208
SER
208
A
VAL
209
n
209
VAL
209
A
SER
210
n
210
SER
210
A
LYS
211
n
211
MLY
211
A
VAL
212
n
212
VAL
212
A
ILE
213
n
213
ILE
213
A
ALA
214
n
214
ALA
214
A
LYS
215
n
215
LYS
215
A
VAL
216
n
216
VAL
216
A
GLY
217
n
217
GLY
217
A
THR
218
n
218
THR
218
A
SER
219
n
219
SER
219
A
GLY
220
n
220
GLY
220
A
ASP
221
n
221
ASP
221
A
SER
222
n
222
SER
222
A
THR
223
n
223
THR
223
A
VAL
224
n
224
VAL
224
A
THR
225
n
225
THR
225
A
LEU
226
n
226
LEU
226
A
PRO
227
n
227
PRO
227
A
GLY
228
n
228
GLY
228
A
ASP
229
n
229
ASP
229
A
LEU
230
n
230
LEU
230
A
LYS
231
n
231
MLY
231
A
ASP
232
n
232
ASP
232
A
GLU
233
n
233
GLU
233
A
ASN
234
n
234
ASN
234
A
ASN
235
n
235
ASN
235
A
LYS
236
n
236
LYS
236
A
PRO
237
n
237
PRO
237
A
TRP
238
n
238
TRP
238
A
THR
239
n
239
THR
239
A
THR
240
n
240
THR
240
A
ALA
241
n
241
ALA
241
A
THR
242
n
242
THR
242
A
MET
243
n
243
MET
243
A
ASN
244
n
244
ASN
244
A
ASP
245
n
245
ASP
245
A
LEU
246
n
246
LEU
246
A
LYS
247
n
247
LYS
247
A
ASN
248
n
248
ASN
248
A
ASP
249
n
249
ASP
249
A
ILE
250
n
250
ILE
250
A
MET
251
n
251
MET
251
A
ALA
252
n
252
ALA
252
A
LEU
253
n
253
LEU
253
A
LEU
254
n
254
LEU
254
A
THR
255
n
255
THR
255
A
HIS
256
n
256
HIS
256
A
VAL
257
n
257
VAL
257
A
THR
258
n
258
THR
258
A
CYS
259
n
259
CYS
259
A
LYS
260
n
260
LYS
260
A
VAL
261
n
261
VAL
261
A
LYS
262
n
262
LYS
262
A
author_defined_assembly
1
monomeric
A
MLY
26
N-DIMETHYL-LYSINE
A
MLY
26
LYS
A
MLY
28
N-DIMETHYL-LYSINE
A
MLY
28
LYS
A
MLY
46
N-DIMETHYL-LYSINE
A
MLY
46
LYS
A
MLY
53
N-DIMETHYL-LYSINE
A
MLY
53
LYS
A
MLY
87
N-DIMETHYL-LYSINE
A
MLY
87
LYS
A
MLY
115
N-DIMETHYL-LYSINE
A
MLY
115
LYS
A
MLY
134
N-DIMETHYL-LYSINE
A
MLY
134
LYS
A
MLY
143
N-DIMETHYL-LYSINE
A
MLY
143
LYS
A
MLY
177
N-DIMETHYL-LYSINE
A
MLY
177
LYS
A
MLY
182
N-DIMETHYL-LYSINE
A
MLY
182
LYS
A
MLY
184
N-DIMETHYL-LYSINE
A
MLY
184
LYS
A
MLY
198
N-DIMETHYL-LYSINE
A
MLY
198
LYS
A
MLY
211
N-DIMETHYL-LYSINE
A
MLY
211
LYS
A
MLY
231
N-DIMETHYL-LYSINE
A
MLY
231
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
4
A
N
PHE
4
A
O
ASP
51
A
O
ASP
51
A
N
VAL
50
A
N
VAL
50
A
O
LEU
61
A
O
LEU
61
A
N
ALA
62
A
N
ALA
62
A
O
GLY
72
A
O
GLY
72
A
N
TYR
73
A
N
TYR
73
A
O
ARG
84
A
O
ARG
84
A
N
CYS
32
A
N
CYS
32
A
O
MET
35
A
O
MET
35
A
N
VAL
224
A
N
VAL
224
A
O
ALA
241
A
O
ALA
241
1
A
ASP
75
-134.03
-159.52
1
A
PRO
112
-74.62
38.57
1
A
GLN
154
-103.52
-60.03
1
A
VAL
170
-97.79
-67.18
1
A
ILE
250
-102.45
-66.60
0.245
0.201
0.203
1.60
7.00
3605
36455
10.00
97.1
RANDOM
0.0001
1
Isotropic
THROUGHOUT
2.00
2.0
MOLECULAR REPLACEMENT
Engh & Huber
1.60
7.00
260
2357
0
0
2097
0.007
1.67
1.17
1.60
20.00
1LLN
38088
37018
0.0
0.0
0.052
1
23.9
4.4
97.3
0.132
1.60
1.66
96.9
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
refinement
X-PLOR
3.851
phasing
X-PLOR
Antiviral Protein 3
1.6A CRYSTAL STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN-III (PAP-III) WITH METHYLATED LYSINES
1
N
N
2
N
N
A
THR
10
A
THR
10
HELX_P
A
VAL
25
A
VAL
25
1
1
16
A
ASP
92
A
ASP
92
HELX_P
A
CYS
98
A
CYS
98
1
2
7
A
SER
116
A
SER
116
HELX_P
A
GLY
125
A
GLY
125
1
3
10
A
ALA
126
A
ALA
126
HELX_P
A
LEU
130
A
LEU
130
5
4
5
A
GLY
133
A
GLY
133
HELX_P
A
TYR
145
A
TYR
145
1
5
13
A
GLN
154
A
GLN
154
HELX_P
A
PHE
176
A
PHE
176
1
6
23
A
PHE
176
A
PHE
176
HELX_P
A
LYS
186
A
LYS
186
1
7
11
A
ASP
196
A
ASP
196
HELX_P
A
LYS
204
A
LYS
204
1
8
9
A
ASN
205
A
ASN
205
HELX_P
A
VAL
216
A
VAL
216
1
9
12
A
MET
243
A
MET
243
HELX_P
A
ASP
249
A
ASP
249
1
10
7
disulf
2.033
A
CYS
32
A
SG
CYS
32
1_555
A
CYS
259
A
SG
CYS
259
1_555
disulf
2.038
A
CYS
81
A
SG
CYS
81
1_555
A
CYS
98
A
SG
CYS
98
1_555
covale
1.328
A
VAL
25
A
C
VAL
25
1_555
A
MLY
26
A
N
MLY
26
1_555
covale
1.329
A
MLY
26
A
C
MLY
26
1_555
A
ASP
27
A
N
ASP
27
1_555
covale
1.326
A
ASP
27
A
C
ASP
27
1_555
A
MLY
28
A
N
MLY
28
1_555
covale
1.330
A
MLY
28
A
C
MLY
28
1_555
A
LYS
29
A
N
LYS
29
1_555
covale
1.328
A
PRO
45
A
C
PRO
45
1_555
A
MLY
46
A
N
MLY
46
1_555
covale
1.328
A
MLY
46
A
C
MLY
46
1_555
A
TYR
47
A
N
TYR
47
1_555
covale
1.326
A
LEU
52
A
C
LEU
52
1_555
A
MLY
53
A
N
MLY
53
1_555
covale
1.331
A
MLY
53
A
C
MLY
53
1_555
A
PHE
54
A
N
PHE
54
1_555
covale
1.327
A
PHE
86
A
C
PHE
86
1_555
A
MLY
87
A
N
MLY
87
1_555
covale
1.331
A
MLY
87
A
C
MLY
87
1_555
A
ASP
88
A
N
ASP
88
1_555
covale
1.330
A
GLU
114
A
C
GLU
114
1_555
A
MLY
115
A
N
MLY
115
1_555
covale
1.329
A
MLY
115
A
C
MLY
115
1_555
A
SER
116
A
N
SER
116
1_555
covale
1.328
A
GLY
133
A
C
GLY
133
1_555
A
MLY
134
A
N
MLY
134
1_555
covale
1.332
A
MLY
134
A
C
MLY
134
1_555
A
ILE
135
A
N
ILE
135
1_555
covale
1.331
A
GLY
142
A
C
GLY
142
1_555
A
MLY
143
A
N
MLY
143
1_555
covale
1.331
A
MLY
143
A
C
MLY
143
1_555
A
ILE
144
A
N
ILE
144
1_555
covale
1.331
A
PHE
176
A
C
PHE
176
1_555
A
MLY
177
A
N
MLY
177
1_555
covale
1.334
A
MLY
177
A
C
MLY
177
1_555
A
TYR
178
A
N
TYR
178
1_555
covale
1.331
A
ASN
181
A
C
ASN
181
1_555
A
MLY
182
A
N
MLY
182
1_555
covale
1.329
A
MLY
182
A
C
MLY
182
1_555
A
VAL
183
A
N
VAL
183
1_555
covale
1.335
A
VAL
183
A
C
VAL
183
1_555
A
MLY
184
A
N
MLY
184
1_555
covale
1.329
A
MLY
184
A
C
MLY
184
1_555
A
ALA
185
A
N
ALA
185
1_555
covale
1.333
A
PRO
197
A
C
PRO
197
1_555
A
MLY
198
A
N
MLY
198
1_555
covale
1.330
A
MLY
198
A
C
MLY
198
1_555
A
ALA
199
A
N
ALA
199
1_555
covale
1.329
A
SER
210
A
C
SER
210
1_555
A
MLY
211
A
N
MLY
211
1_555
covale
1.333
A
MLY
211
A
C
MLY
211
1_555
A
VAL
212
A
N
VAL
212
1_555
covale
1.328
A
LEU
230
A
C
LEU
230
1_555
A
MLY
231
A
N
MLY
231
1_555
covale
1.332
A
MLY
231
A
C
MLY
231
1_555
A
ASP
232
A
N
ASP
232
1_555
HYDROLASE
POKEWEED ANTIVIRAL PROTEIN, RIBOSOME INACTIVATING PROTEIN, POLYNUCLEOTIDE:ADENOSINE, HYDROLASE
A
GLN
44
A
GLN
44
1
A
PRO
45
A
PRO
45
-0.14
RIP2_PHYAM
UNP
1
26
Q40772
NIVFDVENATPETYSNFLTSLREAVKDKKLTCHGMIMATTLTEQPKYVLVDLKFGSGTFTLAIRRGNLYLEGYSDIYNGK
CRYRIFKDSESDAQETVCPGDKSKPGTQNNIPYEKSYKGMESKGGARTKLGLGKITLKSRMGKIYGKDATDQKQYQKNEA
EFLLIAVQMVTEASRFKYIENKVKAKFDDANGYQPDPKAISLEKNWDSVSKVIAKVGTSGDSTVTLPGDLKDENNKPWTT
ATMNDLKNDIMALLTHVTCKVK
26
287
1LLN
1
262
Q40772
A
1
1
262
1
LYS
MODIFIED RESIDUE
MLY
26
1LLN
A
Q40772
UNP
51
26
1
LYS
MODIFIED RESIDUE
MLY
28
1LLN
A
Q40772
UNP
53
28
1
LYS
MODIFIED RESIDUE
MLY
46
1LLN
A
Q40772
UNP
71
46
1
LYS
MODIFIED RESIDUE
MLY
53
1LLN
A
Q40772
UNP
78
53
1
LYS
MODIFIED RESIDUE
MLY
87
1LLN
A
Q40772
UNP
112
87
1
LYS
MODIFIED RESIDUE
MLY
115
1LLN
A
Q40772
UNP
140
115
1
LYS
MODIFIED RESIDUE
MLY
134
1LLN
A
Q40772
UNP
159
134
1
LYS
MODIFIED RESIDUE
MLY
143
1LLN
A
Q40772
UNP
168
143
1
LYS
MODIFIED RESIDUE
MLY
177
1LLN
A
Q40772
UNP
202
177
1
LYS
MODIFIED RESIDUE
MLY
182
1LLN
A
Q40772
UNP
207
182
1
LYS
MODIFIED RESIDUE
MLY
184
1LLN
A
Q40772
UNP
209
184
1
LYS
MODIFIED RESIDUE
MLY
198
1LLN
A
Q40772
UNP
223
198
1
LYS
MODIFIED RESIDUE
MLY
211
1LLN
A
Q40772
UNP
236
211
1
LYS
MODIFIED RESIDUE
MLY
231
1LLN
A
Q40772
UNP
256
231
5
2
2
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
2
A
ILE
2
A
ASP
5
A
ASP
5
A
TYR
47
A
TYR
47
A
PHE
54
A
PHE
54
A
GLY
57
A
GLY
57
A
ARG
64
A
ARG
64
A
LEU
70
A
LEU
70
A
TYR
77
A
TYR
77
A
LYS
80
A
LYS
80
A
ARG
84
A
ARG
84
A
MLY
26
A
MLY
26
A
CYS
32
A
CYS
32
A
MET
35
A
MET
35
A
ALA
38
A
ALA
38
A
THR
223
A
THR
223
A
THR
225
A
THR
225
A
THR
240
A
THR
240
A
THR
242
A
THR
242
152
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