0.026867
0.000000
0.001032
0.000000
0.014552
0.000000
0.000000
0.000000
0.017548
0.00000
0.00000
0.00000
Beamer, L.J.
Pabo, C.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
92.20
90.00
37.220
68.720
57.030
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
N
C
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
Y
90
N
C
N
91
N
N
Y
92
N
N
Y
93
N
C
Y
94
N
N
Y
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
N
C
N
121
R
C
N
122
N
N
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
C
N
150
R
C
N
151
N
O
N
152
S
C
N
153
N
O
N
154
N
C
N
155
R
C
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
C
N
164
N
N
N
165
N
N
Y
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
C
N
187
R
C
N
188
N
O
N
189
S
C
N
190
N
O
N
191
N
C
N
192
R
C
N
193
N
N
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
S
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
N
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
N
343
N
C
N
344
N
S
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
R
C
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
N
440
N
O
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
N
N
454
S
C
N
455
N
C
N
456
N
O
N
457
N
C
N
458
N
C
N
459
N
C
N
460
N
O
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
Y
432
N
doub
Y
433
N
sing
Y
434
N
sing
N
435
N
sing
Y
436
N
doub
N
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
doub
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
227
177
196
10.1016/0022-2836(92)90690-L
1387915
Refined 1.8 A crystal structure of the lambda repressor-operator complex.
1992
US
Science
SCIEAS
0038
0036-8075
254
267
270
The DNA Binding Arm of a Lambda Repressor: Critical Contacts from a Flexible Region
1991
US
Science
SCIEAS
0038
0036-8075
247
1210
1213
Conserved Residues Make Similar Contacts in Two Repressor-Operator Complexes
1990
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
169
757
769
Comparison of the Structures of Cro and Lambda Repressor Proteins from Bacteriophage Lambda
1983
US
Cold Spring Harbor Symp.Quant.Biol.
CSHSAZ
0421
0091-7451
47
435
Structure of the Operator-Binding Domain of Bacteriophage Lambda Repressor. Implications for DNA Recognition and Gene Regulation
1983
UK
Nature
NATUAS
0006
0028-0836
298
447
Homology Among DNA-Binding Proteins Suggests Use of a Conserved Super-Secondary Structure
1982
UK
Nature
NATUAS
0006
0028-0836
298
443
The Operator-Binding Domain of Lambda Repressor. Structure and DNA Recognition
1982
UK
Nature
NATUAS
0006
0028-0836
298
441
443
The N-Terminal Arms of Lambda Repressor Wrap Around the Operator DNA
1982
10.2210/pdb1lmb/pdb
pdb_00001lmb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
258.00
1
AREA DETECTOR
UCSD MARK II
SINGLE WAVELENGTH
M
x-ray
1
1.0
6158.004
DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3')
1
syn
polymer
6108.967
DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3')
1
syn
polymer
10136.613
PROTEIN (LAMBDA REPRESSOR)
2
nat
polymer
18.015
water
140
nat
water
no
no
(DA)(DA)(DT)(DA)(DC)(DC)(DA)(DC)(DT)(DG)(DG)(DC)(DG)(DG)(DT)(DG)(DA)(DT)(DA)(DT)
AATACCACTGGCGGTGATAT
1
polydeoxyribonucleotide
no
no
(DT)(DA)(DT)(DA)(DT)(DC)(DA)(DC)(DC)(DG)(DC)(DC)(DA)(DG)(DT)(DG)(DG)(DT)(DA)(DT)
TATATCACCGCCAGTGGTAT
2
polydeoxyribonucleotide
no
no
STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSI
AREIYEMYEAVS
STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSI
AREIYEMYEAVS
3,4
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lambda-like viruses
sample
10710
Enterobacteria phage lambda
2.21
44.29
VAPOR DIFFUSION
7.00
pH 7.00, VAPOR DIFFUSION
WATER
1
PEG 400
1
BIS-TRIS-PROPANE_HCL
1
WATER
2
PEG 400
2
-2.071
1
20
1
2
2
40
-0.196
1_DA2:DT40_2
1
-18.456
0.237
-0.002
-0.153
-0.333
1
20
1
3
2
39
6.382
1_DT3:DA39_2
2
-9.423
0.081
-0.022
0.042
-5.428
1
20
1
4
2
38
7.877
1_DA4:DT38_2
3
-11.603
0.214
0.163
-0.052
-6.797
1
19
1
5
2
37
5.294
1_DC5:DG37_2
4
-14.451
0.283
0.035
-0.119
-7.677
1
19
1
6
2
36
4.397
1_DC6:DG36_2
5
-8.645
0.107
-0.093
-0.020
6.481
1
20
1
7
2
35
4.772
1_DA7:DT35_2
6
-15.763
-0.041
0.088
-0.204
-1.058
1
19
1
8
2
34
0.688
1_DC8:DG34_2
7
-10.750
0.221
-0.063
-0.081
-2.590
1
20
1
9
2
33
-4.277
1_DT9:DA33_2
8
-11.922
-0.043
0.051
-0.185
-4.064
1
19
1
10
2
32
-2.421
1_DG10:DC32_2
9
-11.957
-0.353
0.178
-0.257
4.902
1
19
1
11
2
31
0.735
1_DG11:DC31_2
10
-10.526
-0.143
0.091
-0.042
1.381
1
19
1
12
2
30
-3.525
1_DC12:DG30_2
11
-17.980
0.060
0.255
-0.175
-0.982
1
19
1
13
2
29
-0.939
1_DG13:DC29_2
12
1.398
-0.277
-0.085
-0.084
-0.683
1
19
1
14
2
28
-0.902
1_DG14:DC28_2
13
-5.411
0.035
0.030
-0.220
-7.332
1
20
1
15
2
27
0.830
1_DT15:DA27_2
14
-6.286
0.042
0.154
0.011
5.037
1
19
1
16
2
26
1.560
1_DG16:DC26_2
15
-7.027
-0.262
-0.475
-0.194
1.364
1
20
1
17
2
25
1.151
1_DA17:DT25_2
16
-9.124
-0.157
-0.160
-0.013
9.304
1
20
1
18
2
24
6.293
1_DT18:DA24_2
17
-11.994
-0.120
-0.116
-0.009
-3.937
1
20
1
19
2
23
5.167
1_DA19:DT23_2
18
-13.079
-0.088
0.124
0.053
-1.605
1
20
1
20
2
22
2.132
1_DT20:DA22_2
19
-14.518
-0.148
-0.261
-0.081
3.245
29.614
1
1
2
3
1.858
2
2
40
39
3.264
0.950
0.409
-0.678
11_DA2DT3:DA39DT40_22
1
0.316
-0.618
29.598
-1.526
-0.735
3.435
39.963
1
1
3
4
-0.781
2
2
39
38
3.443
-0.534
0.163
-0.042
11_DT3DA4:DT38DA39_22
2
-1.629
2.385
39.928
0.004
-0.436
3.330
32.223
1
1
4
5
0.911
2
2
38
37
3.337
0.506
-0.648
-0.492
11_DA4DC5:DG37DT38_22
3
-0.045
0.081
32.219
-0.978
1.159
3.379
33.788
1
1
5
6
7.405
2
2
37
36
3.436
4.290
-0.145
-0.128
11_DC5DC6:DG36DG37_22
4
2.068
-3.569
33.460
-0.947
0.599
3.316
34.922
1
1
6
7
15.937
2
2
36
35
3.137
9.450
0.082
1.116
11_DC6DA7:DT35DG36_22
5
-1.039
1.752
33.642
0.421
-0.295
3.464
31.597
1
1
7
8
3.485
2
2
35
34
3.511
1.897
0.423
-0.804
11_DA7DC8:DG34DT35_22
6
0.521
-0.957
31.537
-1.851
-0.673
3.416
33.462
1
1
8
9
9.822
2
2
34
33
3.499
5.624
-0.556
0.104
11_DC8DT9:DA33DG34_22
7
2.631
-4.595
32.897
-0.809
1.428
3.134
47.305
1
1
9
10
-6.537
2
2
33
32
3.390
-5.235
-0.128
2.295
11_DT9DG10:DC32DA33_22
8
-0.713
0.890
47.025
3.285
0.101
3.357
25.838
1
1
10
11
12.806
2
2
32
31
3.251
5.681
0.417
0.831
11_DG10DG11:DC31DC32_22
9
0.185
-0.417
25.215
0.241
-0.879
3.524
42.355
1
1
11
12
-7.075
2
2
31
30
3.544
-5.097
-1.160
0.564
11_DG11DC12:DG30DC31_22
10
-2.908
4.036
41.965
1.345
1.283
3.659
35.959
1
1
12
13
-7.878
2
2
30
29
3.535
-4.827
1.976
0.969
11_DC12DG13:DC29DG30_22
11
6.197
-10.115
35.118
2.335
-2.218
3.075
24.432
1
1
13
14
10.475
2
2
29
28
3.434
4.404
0.790
-1.248
11_DG13DG14:DC28DC29_22
12
-2.174
5.172
23.941
-4.328
-2.547
3.099
31.324
1
1
14
15
13.394
2
2
28
27
3.553
7.161
-0.770
-1.253
11_DG14DT15:DA27DC28_22
13
2.912
-5.448
30.379
-3.717
1.994
3.110
34.506
1
1
15
16
19.990
2
2
27
26
3.184
11.604
-0.078
0.429
11_DT15DG16:DC26DA27_22
14
4.626
-7.970
32.229
-1.070
0.847
3.326
40.547
1
1
16
17
-1.660
2
2
26
25
3.339
-1.150
0.117
-0.006
11_DG16DA17:DT25DC26_22
15
-2.409
3.478
40.463
0.122
-0.443
3.115
29.617
1
1
17
18
-1.084
2
2
25
24
3.107
-0.554
0.123
-0.514
11_DA17DT18:DA24DT25_22
16
-0.292
0.571
29.610
-0.895
-0.299
3.624
40.883
1
1
18
19
2.754
2
2
24
23
3.621
1.922
-0.194
0.032
11_DT18DA19:DT23DA24_22
17
-2.636
3.777
40.758
-0.188
-0.043
3.167
30.998
1
1
19
20
2.678
2
2
23
22
3.223
1.430
-0.523
-0.669
11_DA19DT20:DA22DT23_22
18
1.243
-2.328
30.941
-1.522
1.213
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1991-11-05
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
1993-10-15
SPRSDE
BNL
Y
BNL
1991-11-05
REL
HOH
water
HOH
1
4
HOH
HOH
21
1
HOH
4
4
HOH
HOH
22
1
HOH
9
4
HOH
HOH
23
1
HOH
10
4
HOH
HOH
24
1
HOH
11
4
HOH
HOH
25
1
HOH
12
4
HOH
HOH
26
1
HOH
14
4
HOH
HOH
27
1
HOH
16
4
HOH
HOH
28
1
HOH
18
4
HOH
HOH
29
1
HOH
36
4
HOH
HOH
30
1
HOH
38
4
HOH
HOH
31
1
HOH
42
4
HOH
HOH
32
1
HOH
44
4
HOH
HOH
33
1
HOH
47
4
HOH
HOH
34
1
HOH
48
4
HOH
HOH
35
1
HOH
52
4
HOH
HOH
36
1
HOH
61
4
HOH
HOH
37
1
HOH
66
4
HOH
HOH
38
1
HOH
67
4
HOH
HOH
39
1
HOH
73
4
HOH
HOH
40
1
HOH
76
4
HOH
HOH
41
1
HOH
79
4
HOH
HOH
42
1
HOH
92
4
HOH
HOH
43
1
HOH
99
4
HOH
HOH
44
1
HOH
100
4
HOH
HOH
45
1
HOH
101
4
HOH
HOH
46
1
HOH
102
4
HOH
HOH
47
1
HOH
103
4
HOH
HOH
48
1
HOH
115
4
HOH
HOH
49
1
HOH
116
4
HOH
HOH
50
1
HOH
117
4
HOH
HOH
51
1
HOH
118
4
HOH
HOH
52
1
HOH
121
4
HOH
HOH
53
1
HOH
123
4
HOH
HOH
54
1
HOH
134
4
HOH
HOH
55
1
HOH
135
4
HOH
HOH
56
1
HOH
2
4
HOH
HOH
41
2
HOH
17
4
HOH
HOH
42
2
HOH
34
4
HOH
HOH
43
2
HOH
39
4
HOH
HOH
44
2
HOH
40
4
HOH
HOH
45
2
HOH
41
4
HOH
HOH
46
2
HOH
43
4
HOH
HOH
47
2
HOH
45
4
HOH
HOH
48
2
HOH
50
4
HOH
HOH
49
2
HOH
54
4
HOH
HOH
50
2
HOH
57
4
HOH
HOH
51
2
HOH
58
4
HOH
HOH
52
2
HOH
60
4
HOH
HOH
53
2
HOH
62
4
HOH
HOH
54
2
HOH
74
4
HOH
HOH
55
2
HOH
80
4
HOH
HOH
56
2
HOH
83
4
HOH
HOH
57
2
HOH
85
4
HOH
HOH
58
2
HOH
89
4
HOH
HOH
59
2
HOH
112
4
HOH
HOH
60
2
HOH
113
4
HOH
HOH
61
2
HOH
114
4
HOH
HOH
62
2
HOH
128
4
HOH
HOH
63
2
HOH
130
4
HOH
HOH
64
2
HOH
131
4
HOH
HOH
65
2
HOH
139
4
HOH
HOH
66
2
HOH
140
4
HOH
HOH
67
2
HOH
22
4
HOH
HOH
93
3
HOH
23
4
HOH
HOH
94
3
HOH
24
4
HOH
HOH
95
3
HOH
25
4
HOH
HOH
96
3
HOH
26
4
HOH
HOH
97
3
HOH
27
4
HOH
HOH
98
3
HOH
28
4
HOH
HOH
99
3
HOH
29
4
HOH
HOH
100
3
HOH
30
4
HOH
HOH
101
3
HOH
31
4
HOH
HOH
102
3
HOH
32
4
HOH
HOH
103
3
HOH
33
4
HOH
HOH
104
3
HOH
35
4
HOH
HOH
105
3
HOH
37
4
HOH
HOH
106
3
HOH
49
4
HOH
HOH
107
3
HOH
51
4
HOH
HOH
108
3
HOH
55
4
HOH
HOH
109
3
HOH
59
4
HOH
HOH
110
3
HOH
63
4
HOH
HOH
111
3
HOH
64
4
HOH
HOH
112
3
HOH
65
4
HOH
HOH
113
3
HOH
68
4
HOH
HOH
114
3
HOH
75
4
HOH
HOH
115
3
HOH
78
4
HOH
HOH
116
3
HOH
81
4
HOH
HOH
117
3
HOH
82
4
HOH
HOH
118
3
HOH
84
4
HOH
HOH
119
3
HOH
86
4
HOH
HOH
120
3
HOH
87
4
HOH
HOH
121
3
HOH
96
4
HOH
HOH
122
3
HOH
98
4
HOH
HOH
123
3
HOH
104
4
HOH
HOH
124
3
HOH
105
4
HOH
HOH
125
3
HOH
106
4
HOH
HOH
126
3
HOH
107
4
HOH
HOH
127
3
HOH
108
4
HOH
HOH
128
3
HOH
109
4
HOH
HOH
129
3
HOH
110
4
HOH
HOH
130
3
HOH
111
4
HOH
HOH
131
3
HOH
119
4
HOH
HOH
132
3
HOH
122
4
HOH
HOH
133
3
HOH
124
4
HOH
HOH
134
3
HOH
125
4
HOH
HOH
135
3
HOH
126
4
HOH
HOH
136
3
HOH
129
4
HOH
HOH
137
3
HOH
133
4
HOH
HOH
138
3
HOH
136
4
HOH
HOH
139
3
HOH
142
4
HOH
HOH
140
3
HOH
3
4
HOH
HOH
93
4
HOH
5
4
HOH
HOH
94
4
HOH
6
4
HOH
HOH
95
4
HOH
7
4
HOH
HOH
96
4
HOH
8
4
HOH
HOH
97
4
HOH
13
4
HOH
HOH
98
4
HOH
15
4
HOH
HOH
99
4
HOH
19
4
HOH
HOH
100
4
HOH
20
4
HOH
HOH
101
4
HOH
21
4
HOH
HOH
102
4
HOH
53
4
HOH
HOH
103
4
HOH
56
4
HOH
HOH
104
4
HOH
69
4
HOH
HOH
105
4
HOH
70
4
HOH
HOH
106
4
HOH
71
4
HOH
HOH
107
4
HOH
72
4
HOH
HOH
108
4
HOH
88
4
HOH
HOH
109
4
HOH
90
4
HOH
HOH
110
4
HOH
91
4
HOH
HOH
111
4
HOH
93
4
HOH
HOH
112
4
HOH
94
4
HOH
HOH
113
4
HOH
95
4
HOH
HOH
114
4
HOH
97
4
HOH
HOH
115
4
HOH
120
4
HOH
HOH
116
4
HOH
127
4
HOH
HOH
117
4
HOH
132
4
HOH
HOH
118
4
HOH
137
4
HOH
HOH
119
4
HOH
138
4
HOH
HOH
120
4
HOH
141
4
HOH
HOH
121
4
A
1
n
1
DA
1
1
A
2
n
2
DA
2
1
T
3
n
3
DT
3
1
A
4
n
4
DA
4
1
C
5
n
5
DC
5
1
C
6
n
6
DC
6
1
A
7
n
7
DA
7
1
C
8
n
8
DC
8
1
T
9
n
9
DT
9
1
G
10
n
10
DG
10
1
G
11
n
11
DG
11
1
C
12
n
12
DC
12
1
G
13
n
13
DG
13
1
G
14
n
14
DG
14
1
T
15
n
15
DT
15
1
G
16
n
16
DG
16
1
A
17
n
17
DA
17
1
T
18
n
18
DT
18
1
A
19
n
19
DA
19
1
T
20
n
20
DT
20
1
T
21
n
1
DT
21
2
A
22
n
2
DA
22
2
T
23
n
3
DT
23
2
A
24
n
4
DA
24
2
T
25
n
5
DT
25
2
C
26
n
6
DC
26
2
A
27
n
7
DA
27
2
C
28
n
8
DC
28
2
C
29
n
9
DC
29
2
G
30
n
10
DG
30
2
C
31
n
11
DC
31
2
C
32
n
12
DC
32
2
A
33
n
13
DA
33
2
G
34
n
14
DG
34
2
T
35
n
15
DT
35
2
G
36
n
16
DG
36
2
G
37
n
17
DG
37
2
T
38
n
18
DT
38
2
A
39
n
19
DA
39
2
T
40
n
20
DT
40
2
n
1
1
3
n
2
2
3
n
3
3
3
n
4
4
3
n
5
5
3
PRO
6
n
6
PRO
6
3
LEU
7
n
7
LEU
7
3
THR
8
n
8
THR
8
3
GLN
9
n
9
GLN
9
3
GLU
10
n
10
GLU
10
3
GLN
11
n
11
GLN
11
3
LEU
12
n
12
LEU
12
3
GLU
13
n
13
GLU
13
3
ASP
14
n
14
ASP
14
3
ALA
15
n
15
ALA
15
3
ARG
16
n
16
ARG
16
3
ARG
17
n
17
ARG
17
3
LEU
18
n
18
LEU
18
3
LYS
19
n
19
LYS
19
3
ALA
20
n
20
ALA
20
3
ILE
21
n
21
ILE
21
3
TYR
22
n
22
TYR
22
3
GLU
23
n
23
GLU
23
3
LYS
24
n
24
LYS
24
3
LYS
25
n
25
LYS
25
3
LYS
26
n
26
LYS
26
3
ASN
27
n
27
ASN
27
3
GLU
28
n
28
GLU
28
3
LEU
29
n
29
LEU
29
3
GLY
30
n
30
GLY
30
3
LEU
31
n
31
LEU
31
3
SER
32
n
32
SER
32
3
GLN
33
n
33
GLN
33
3
GLU
34
n
34
GLU
34
3
SER
35
n
35
SER
35
3
VAL
36
n
36
VAL
36
3
ALA
37
n
37
ALA
37
3
ASP
38
n
38
ASP
38
3
LYS
39
n
39
LYS
39
3
MET
40
n
40
MET
40
3
GLY
41
n
41
GLY
41
3
MET
42
n
42
MET
42
3
GLY
43
n
43
GLY
43
3
GLN
44
n
44
GLN
44
3
SER
45
n
45
SER
45
3
GLY
46
n
46
GLY
46
3
VAL
47
n
47
VAL
47
3
GLY
48
n
48
GLY
48
3
ALA
49
n
49
ALA
49
3
LEU
50
n
50
LEU
50
3
PHE
51
n
51
PHE
51
3
ASN
52
n
52
ASN
52
3
GLY
53
n
53
GLY
53
3
ILE
54
n
54
ILE
54
3
ASN
55
n
55
ASN
55
3
ALA
56
n
56
ALA
56
3
LEU
57
n
57
LEU
57
3
ASN
58
n
58
ASN
58
3
ALA
59
n
59
ALA
59
3
TYR
60
n
60
TYR
60
3
ASN
61
n
61
ASN
61
3
ALA
62
n
62
ALA
62
3
ALA
63
n
63
ALA
63
3
LEU
64
n
64
LEU
64
3
LEU
65
n
65
LEU
65
3
ALA
66
n
66
ALA
66
3
LYS
67
n
67
LYS
67
3
ILE
68
n
68
ILE
68
3
LEU
69
n
69
LEU
69
3
LYS
70
n
70
LYS
70
3
VAL
71
n
71
VAL
71
3
SER
72
n
72
SER
72
3
VAL
73
n
73
VAL
73
3
GLU
74
n
74
GLU
74
3
GLU
75
n
75
GLU
75
3
PHE
76
n
76
PHE
76
3
SER
77
n
77
SER
77
3
PRO
78
n
78
PRO
78
3
SER
79
n
79
SER
79
3
ILE
80
n
80
ILE
80
3
ALA
81
n
81
ALA
81
3
ARG
82
n
82
ARG
82
3
GLU
83
n
83
GLU
83
3
ILE
84
n
84
ILE
84
3
TYR
85
n
85
TYR
85
3
GLU
86
n
86
GLU
86
3
MET
87
n
87
MET
87
3
TYR
88
n
88
TYR
88
3
GLU
89
n
89
GLU
89
3
ALA
90
n
90
ALA
90
3
VAL
91
n
91
VAL
91
3
SER
92
n
92
SER
92
3
SER
1
n
1
SER
1
4
THR
2
n
2
THR
2
4
LYS
3
n
3
LYS
3
4
LYS
4
n
4
LYS
4
4
LYS
5
n
5
LYS
5
4
PRO
6
n
6
PRO
6
4
LEU
7
n
7
LEU
7
4
THR
8
n
8
THR
8
4
GLN
9
n
9
GLN
9
4
GLU
10
n
10
GLU
10
4
GLN
11
n
11
GLN
11
4
LEU
12
n
12
LEU
12
4
GLU
13
n
13
GLU
13
4
ASP
14
n
14
ASP
14
4
ALA
15
n
15
ALA
15
4
ARG
16
n
16
ARG
16
4
ARG
17
n
17
ARG
17
4
LEU
18
n
18
LEU
18
4
LYS
19
n
19
LYS
19
4
ALA
20
n
20
ALA
20
4
ILE
21
n
21
ILE
21
4
TYR
22
n
22
TYR
22
4
GLU
23
n
23
GLU
23
4
LYS
24
n
24
LYS
24
4
LYS
25
n
25
LYS
25
4
LYS
26
n
26
LYS
26
4
ASN
27
n
27
ASN
27
4
GLU
28
n
28
GLU
28
4
LEU
29
n
29
LEU
29
4
GLY
30
n
30
GLY
30
4
LEU
31
n
31
LEU
31
4
SER
32
n
32
SER
32
4
GLN
33
n
33
GLN
33
4
GLU
34
n
34
GLU
34
4
SER
35
n
35
SER
35
4
VAL
36
n
36
VAL
36
4
ALA
37
n
37
ALA
37
4
ASP
38
n
38
ASP
38
4
LYS
39
n
39
LYS
39
4
MET
40
n
40
MET
40
4
GLY
41
n
41
GLY
41
4
MET
42
n
42
MET
42
4
GLY
43
n
43
GLY
43
4
GLN
44
n
44
GLN
44
4
SER
45
n
45
SER
45
4
GLY
46
n
46
GLY
46
4
VAL
47
n
47
VAL
47
4
GLY
48
n
48
GLY
48
4
ALA
49
n
49
ALA
49
4
LEU
50
n
50
LEU
50
4
PHE
51
n
51
PHE
51
4
ASN
52
n
52
ASN
52
4
GLY
53
n
53
GLY
53
4
ILE
54
n
54
ILE
54
4
ASN
55
n
55
ASN
55
4
ALA
56
n
56
ALA
56
4
LEU
57
n
57
LEU
57
4
ASN
58
n
58
ASN
58
4
ALA
59
n
59
ALA
59
4
TYR
60
n
60
TYR
60
4
ASN
61
n
61
ASN
61
4
ALA
62
n
62
ALA
62
4
ALA
63
n
63
ALA
63
4
LEU
64
n
64
LEU
64
4
LEU
65
n
65
LEU
65
4
ALA
66
n
66
ALA
66
4
LYS
67
n
67
LYS
67
4
ILE
68
n
68
ILE
68
4
LEU
69
n
69
LEU
69
4
LYS
70
n
70
LYS
70
4
VAL
71
n
71
VAL
71
4
SER
72
n
72
SER
72
4
VAL
73
n
73
VAL
73
4
GLU
74
n
74
GLU
74
4
GLU
75
n
75
GLU
75
4
PHE
76
n
76
PHE
76
4
SER
77
n
77
SER
77
4
PRO
78
n
78
PRO
78
4
SER
79
n
79
SER
79
4
ILE
80
n
80
ILE
80
4
ALA
81
n
81
ALA
81
4
ARG
82
n
82
ARG
82
4
GLU
83
n
83
GLU
83
4
ILE
84
n
84
ILE
84
4
TYR
85
n
85
TYR
85
4
GLU
86
n
86
GLU
86
4
MET
87
n
87
MET
87
4
TYR
88
n
88
TYR
88
4
GLU
89
n
89
GLU
89
4
ALA
90
n
90
ALA
90
4
VAL
91
n
91
VAL
91
4
SER
92
n
92
SER
92
4
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
3
SER
1
C
SER
1
1
Y
1
3
THR
2
C
THR
2
1
Y
1
3
LYS
3
C
LYS
3
1
Y
1
3
LYS
4
C
LYS
4
1
Y
1
3
LYS
5
C
LYS
5
1
Y
1
2.82
0.40
105.80
108.62
1
1
1
C8
N9
C4
DA
DA
DA
2
2
2
N
1
9.97
1.20
119.70
129.67
1
1
1
C3'
O3'
P
DT
DT
DA
3
3
4
Y
1
7.45
1.20
120.80
128.25
1
1
1
C6
N1
C1'
DC
DC
DC
5
5
5
N
1
-7.29
1.10
118.80
111.51
1
1
1
C2
N1
C1'
DC
DC
DC
5
5
5
N
1
8.18
1.20
119.70
127.88
1
1
1
C3'
O3'
P
DA
DA
DC
7
7
8
Y
1
3.20
0.30
108.30
111.50
1
1
1
O4'
C1'
N1
DT
DT
DT
9
9
9
N
1
10.50
1.20
119.70
130.20
1
1
1
C3'
O3'
P
DG
DG
DG
10
10
11
Y
1
8.22
1.30
127.00
135.22
1
1
1
C8
N9
C1'
DG
DG
DG
11
11
11
N
1
-8.98
1.30
126.50
117.52
1
1
1
C4
N9
C1'
DG
DG
DG
11
11
11
N
1
5.06
0.30
108.30
113.36
1
1
1
O4'
C1'
N9
DG
DG
DG
13
13
13
N
1
3.02
0.50
106.80
109.82
1
1
1
O4'
C1'
C2'
DG
DG
DG
14
14
14
N
1
2.03
0.30
108.30
110.33
1
1
1
O4'
C1'
N9
DG
DG
DG
14
14
14
N
1
10.44
1.50
120.40
130.84
1
1
1
C6
N1
C1'
DT
DT
DT
15
15
15
N
1
-9.92
1.60
118.20
108.28
1
1
1
C2
N1
C1'
DT
DT
DT
15
15
15
N
1
-4.37
0.70
108.00
103.63
1
1
1
O4'
C1'
N1
DT
DT
DT
18
18
18
N
1
10.12
1.20
119.70
129.82
1
1
1
C3'
O3'
P
DT
DT
DA
18
18
19
Y
1
-4.73
0.70
108.00
103.27
1
1
1
O4'
C1'
N1
DT
DT
DT
20
20
20
N
1
11.15
1.50
120.40
131.55
2
2
2
C6
N1
C1'
DT
DT
DT
21
21
21
N
1
-12.35
1.60
118.20
105.85
2
2
2
C2
N1
C1'
DT
DT
DT
21
21
21
N
1
-10.29
1.60
120.90
110.61
2
2
2
P
O5'
C5'
DA
DA
DA
22
22
22
N
1
-7.37
1.20
120.80
113.43
2
2
2
C6
N1
C1'
DC
DC
DC
26
26
26
N
1
-11.98
1.80
127.70
115.72
2
2
2
C8
N9
C1'
DA
DA
DA
27
27
27
N
1
7.68
1.20
119.70
127.38
2
2
2
C3'
O3'
P
DA
DA
DC
27
27
28
Y
1
7.50
1.20
119.70
127.20
2
2
2
C3'
O3'
P
DC
DC
DC
28
28
29
Y
1
3.23
0.30
108.30
111.53
2
2
2
O4'
C1'
N1
DC
DC
DC
29
29
29
N
1
-4.98
0.70
108.00
103.02
2
2
2
O4'
C1'
N9
DG
DG
DG
30
30
30
N
1
-9.32
1.20
120.80
111.48
2
2
2
C6
N1
C1'
DC
DC
DC
31
31
31
N
1
7.56
1.10
118.80
126.36
2
2
2
C2
N1
C1'
DC
DC
DC
31
31
31
N
1
3.04
0.30
108.30
111.34
2
2
2
O4'
C1'
N1
DC
DC
DC
32
32
32
N
1
-9.75
1.30
127.00
117.25
2
2
2
C8
N9
C1'
DG
DG
DG
36
36
36
N
1
10.24
1.30
126.50
136.74
2
2
2
C4
N9
C1'
DG
DG
DG
36
36
36
N
1
12.63
1.20
119.70
132.33
2
2
2
C3'
O3'
P
DG
DG
DG
36
36
37
Y
1
-12.46
1.30
127.00
114.54
2
2
2
C8
N9
C1'
DG
DG
DG
37
37
37
N
1
12.48
1.30
126.50
138.98
2
2
2
C4
N9
C1'
DG
DG
DG
37
37
37
N
1
11.39
1.20
119.70
131.09
2
2
2
C3'
O3'
P
DT
DT
DA
38
38
39
Y
1
-4.26
0.70
108.00
103.74
2
2
2
O4'
C1'
N9
DA
DA
DA
39
39
39
N
1
3.20
0.30
108.30
111.50
2
2
2
O4'
C1'
N1
DT
DT
DT
40
40
40
N
1
6.60
0.90
118.30
124.90
3
3
3
CB
CG
OD1
ASP
ASP
ASP
14
14
14
N
1
-6.70
0.90
118.30
111.60
3
3
3
CB
CG
OD2
ASP
ASP
ASP
14
14
14
N
1
4.95
0.60
121.00
125.95
3
3
3
CB
CG
CD2
TYR
TYR
TYR
60
60
60
N
1
-6.19
0.60
121.00
114.81
3
3
3
CB
CG
CD1
TYR
TYR
TYR
60
60
60
N
1
10.72
1.40
123.60
134.32
3
3
3
CD
NE
CZ
ARG
ARG
ARG
82
82
82
N
1
-3.85
0.60
121.00
117.15
3
3
3
CB
CG
CD2
TYR
TYR
TYR
85
85
85
N
1
5.82
0.90
118.30
124.12
4
4
4
CB
CG
OD1
ASP
ASP
ASP
14
14
14
N
1
-5.62
0.90
118.30
112.68
4
4
4
CB
CG
OD2
ASP
ASP
ASP
14
14
14
N
1
9.75
1.40
123.60
133.35
4
4
4
CD
NE
CZ
ARG
ARG
ARG
16
16
16
N
1
5.59
0.50
120.30
125.89
4
4
4
NE
CZ
NH1
ARG
ARG
ARG
16
16
16
N
1
-4.49
0.50
120.30
115.81
4
4
4
NE
CZ
NH2
ARG
ARG
ARG
16
16
16
N
1
12.15
1.80
110.60
122.75
4
4
4
N
CA
CB
ASN
ASN
ASN
27
27
27
N
1
-5.52
0.90
118.30
112.78
4
4
4
CB
CG
OD2
ASP
ASP
ASP
38
38
38
N
1
-4.27
0.60
121.00
116.73
4
4
4
CB
CG
CD2
TYR
TYR
TYR
60
60
60
N
1
-7.52
0.80
121.30
113.78
4
4
4
CG
CD1
CE1
TYR
TYR
TYR
60
60
60
N
1
-7.94
0.90
119.80
111.86
4
4
4
CZ
CE2
CD2
TYR
TYR
TYR
60
60
60
N
1
-5.73
0.90
119.80
114.07
4
4
4
CD1
CE1
CZ
TYR
TYR
TYR
85
85
85
N
1
1
1
C5
N7
DA
DA
1
1
-0.043
0.006
1.388
1.345
N
1
1
1
N9
C4
DA
DA
1
1
-0.055
0.006
1.374
1.319
N
1
1
1
C1'
N1
DT
DT
3
3
-0.104
0.014
1.468
1.364
N
1
1
1
O3'
C3'
DA
DA
4
4
-0.036
0.006
1.419
1.383
N
1
1
1
O3'
C3'
DC
DC
5
5
-0.058
0.006
1.419
1.361
N
1
1
1
N1
C6
DC
DC
6
6
-0.037
0.006
1.367
1.330
N
1
1
1
C4
C5
DG
DG
13
13
-0.044
0.007
1.379
1.335
N
1
1
1
O3'
C3'
DT
DT
15
15
-0.079
0.006
1.419
1.340
N
1
1
1
C4
C5
DA
DA
17
17
-0.042
0.007
1.383
1.341
N
1
2
2
O3'
C3'
DT
DT
23
23
-0.060
0.006
1.419
1.359
N
1
2
2
C4
C5
DA
DA
24
24
0.050
0.007
1.383
1.433
N
1
2
2
N3
C4
DA
DA
27
27
-0.044
0.006
1.344
1.300
N
1
2
2
N9
C4
DA
DA
27
27
-0.060
0.006
1.374
1.314
N
1
2
2
O3'
C3'
DC
DC
29
29
-0.060
0.006
1.419
1.359
N
1
2
2
O3'
C3'
DC
DC
31
31
-0.061
0.006
1.419
1.358
N
1
2
2
C4
C5
DG
DG
34
34
-0.051
0.007
1.379
1.328
N
1
2
2
O3'
C3'
DG
DG
37
37
-0.085
0.006
1.419
1.334
N
1
2
2
O3'
C3'
DA
DA
39
39
-0.047
0.006
1.419
1.372
N
1
3
3
CD
OE2
GLU
GLU
28
28
0.067
0.011
1.252
1.319
N
1
3
3
NE
CZ
ARG
ARG
82
82
0.113
0.013
1.326
1.439
N
1
3
3
CD
OE1
GLU
GLU
83
83
0.072
0.011
1.252
1.324
N
1
3
3
CB
CG
TYR
TYR
85
85
-0.095
0.015
1.512
1.417
N
1
4
4
N
CA
LYS
LYS
3
3
0.122
0.020
1.459
1.581
N
1
4
4
CD
OE1
GLU
GLU
10
10
0.069
0.011
1.252
1.321
N
1
4
4
CD
OE1
GLU
GLU
34
34
0.071
0.011
1.252
1.323
N
0.1890000
0.1890000
1.800
8.000
25252
1
2.000
1.800
8.000
140
2334
0
814
1380
1.800
1LMB
28193
2.000
1
refinement
X-PLOR
refinement
TNT
REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
3
GLN
9
C
GLN
9
HELX_P
3
GLU
23
C
GLU
23
1
H13
15
3
GLN
33
C
GLN
33
HELX_P
1ST HELIX OF HTH UNIT
3
LYS
39
C
LYS
39
1
H23
7
3
GLN
44
C
GLN
44
HELX_P
2ND HELIX OF HTH UNIT
3
PHE
51
C
PHE
51
1
H33
8
3
ASN
61
C
ASN
61
HELX_P
3
LEU
69
C
LEU
69
1
H43
9
3
SER
79
C
SER
79
HELX_P
3
SER
92
C
SER
92
1
H53
14
4
GLN
9
D
GLN
9
HELX_P
4
GLU
23
D
GLU
23
1
H14
15
4
GLN
33
D
GLN
33
HELX_P
1ST HELIX OF HTH UNIT
4
LYS
39
D
LYS
39
1
H24
7
4
GLN
44
D
GLN
44
HELX_P
2ND HELIX OF HTH UNIT
4
PHE
51
D
PHE
51
1
H34
8
4
ASN
61
D
ASN
61
HELX_P
4
LEU
69
D
LEU
69
1
H44
9
4
SER
79
D
SER
79
HELX_P
4
SER
92
D
SER
92
1
H54
14
hydrog
WATSON-CRICK
1
DA
2
A
N1
DA
2
1_555
2
DT
40
B
N3
DT
20
1_555
hydrog
WATSON-CRICK
1
DA
2
A
N6
DA
2
1_555
2
DT
40
B
O4
DT
20
1_555
hydrog
WATSON-CRICK
1
DT
3
A
N3
DT
3
1_555
2
DA
39
B
N1
DA
19
1_555
hydrog
WATSON-CRICK
1
DT
3
A
O4
DT
3
1_555
2
DA
39
B
N6
DA
19
1_555
hydrog
WATSON-CRICK
1
DA
4
A
N1
DA
4
1_555
2
DT
38
B
N3
DT
18
1_555
hydrog
WATSON-CRICK
1
DA
4
A
N6
DA
4
1_555
2
DT
38
B
O4
DT
18
1_555
hydrog
WATSON-CRICK
1
DC
5
A
N3
DC
5
1_555
2
DG
37
B
N1
DG
17
1_555
hydrog
WATSON-CRICK
1
DC
5
A
N4
DC
5
1_555
2
DG
37
B
O6
DG
17
1_555
hydrog
WATSON-CRICK
1
DC
5
A
O2
DC
5
1_555
2
DG
37
B
N2
DG
17
1_555
hydrog
WATSON-CRICK
1
DC
6
A
N3
DC
6
1_555
2
DG
36
B
N1
DG
16
1_555
hydrog
WATSON-CRICK
1
DC
6
A
N4
DC
6
1_555
2
DG
36
B
O6
DG
16
1_555
hydrog
WATSON-CRICK
1
DC
6
A
O2
DC
6
1_555
2
DG
36
B
N2
DG
16
1_555
hydrog
WATSON-CRICK
1
DA
7
A
N1
DA
7
1_555
2
DT
35
B
N3
DT
15
1_555
hydrog
WATSON-CRICK
1
DA
7
A
N6
DA
7
1_555
2
DT
35
B
O4
DT
15
1_555
hydrog
WATSON-CRICK
1
DC
8
A
N3
DC
8
1_555
2
DG
34
B
N1
DG
14
1_555
hydrog
WATSON-CRICK
1
DC
8
A
N4
DC
8
1_555
2
DG
34
B
O6
DG
14
1_555
hydrog
WATSON-CRICK
1
DC
8
A
O2
DC
8
1_555
2
DG
34
B
N2
DG
14
1_555
hydrog
WATSON-CRICK
1
DT
9
A
N3
DT
9
1_555
2
DA
33
B
N1
DA
13
1_555
hydrog
WATSON-CRICK
1
DT
9
A
O4
DT
9
1_555
2
DA
33
B
N6
DA
13
1_555
hydrog
WATSON-CRICK
1
DG
10
A
N1
DG
10
1_555
2
DC
32
B
N3
DC
12
1_555
hydrog
WATSON-CRICK
1
DG
10
A
N2
DG
10
1_555
2
DC
32
B
O2
DC
12
1_555
hydrog
WATSON-CRICK
1
DG
10
A
O6
DG
10
1_555
2
DC
32
B
N4
DC
12
1_555
hydrog
WATSON-CRICK
1
DG
11
A
N1
DG
11
1_555
2
DC
31
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
1
DG
11
A
N2
DG
11
1_555
2
DC
31
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
1
DG
11
A
O6
DG
11
1_555
2
DC
31
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
1
DC
12
A
N3
DC
12
1_555
2
DG
30
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
1
DC
12
A
N4
DC
12
1_555
2
DG
30
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
1
DC
12
A
O2
DC
12
1_555
2
DG
30
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
1
DG
13
A
N1
DG
13
1_555
2
DC
29
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
1
DG
13
A
N2
DG
13
1_555
2
DC
29
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
1
DG
13
A
O6
DG
13
1_555
2
DC
29
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
1
DG
14
A
N1
DG
14
1_555
2
DC
28
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
1
DG
14
A
N2
DG
14
1_555
2
DC
28
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
1
DG
14
A
O6
DG
14
1_555
2
DC
28
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
1
DT
15
A
N3
DT
15
1_555
2
DA
27
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
1
DT
15
A
O4
DT
15
1_555
2
DA
27
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
1
DG
16
A
N1
DG
16
1_555
2
DC
26
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
1
DG
16
A
N2
DG
16
1_555
2
DC
26
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
1
DG
16
A
O6
DG
16
1_555
2
DC
26
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
1
DA
17
A
N1
DA
17
1_555
2
DT
25
B
N3
DT
5
1_555
hydrog
WATSON-CRICK
1
DA
17
A
N6
DA
17
1_555
2
DT
25
B
O4
DT
5
1_555
hydrog
WATSON-CRICK
1
DT
18
A
N3
DT
18
1_555
2
DA
24
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
1
DT
18
A
O4
DT
18
1_555
2
DA
24
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
1
DA
19
A
N1
DA
19
1_555
2
DT
23
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
1
DA
19
A
N6
DA
19
1_555
2
DT
23
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
1
DT
20
A
N3
DT
20
1_555
2
DA
22
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
1
DT
20
A
O4
DT
20
1_555
2
DA
22
B
N6
DA
2
1_555
TRANSCRIPTION/DNA
PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX
RPC1_LAMBD
UNP
3
P03034
1LMB
PDB
1
1LMB
1LMB
PDB
2
1LMB
1
92
1LMB
1
92
P03034
3
1
1
92
1
92
1LMB
1
92
P03034
4
1
1
92
1
20
1LMB
1
20
1LMB
1
2
1
20
21
40
1LMB
21
40
1LMB
2
3
1
20
4
P 1 21 1