0.020243
0.000000
0.000000
0.000000
0.018315
0.000000
0.000000
0.000000
0.010741
0.00000
0.00000
0.00000
Thoden, J.B.
Holden, H.M.
Zhuang, Z.
Dunaway-Mariano, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
49.400
54.600
93.100
C28 H42 N7 O17 P3 S
873.656
4-HYDROXYBENZYL COENZYME A
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
N
Y
2
N
C
Y
3
N
N
Y
4
N
C
Y
5
N
C
Y
6
N
C
N
7
N
N
Y
8
N
N
Y
9
N
C
Y
10
N
N
N
11
R
C
N
12
R
C
N
13
N
O
N
14
S
C
N
15
N
O
N
16
N
P
N
17
N
O
N
18
N
O
N
19
N
O
N
20
R
C
N
21
N
O
N
22
N
C
N
23
N
O
N
24
S
P
N
25
N
O
N
26
N
O
N
27
N
O
N
28
S
P
N
29
N
O
N
30
N
O
N
31
N
O
N
32
N
C
N
33
N
C
N
34
N
C
N
35
N
C
N
36
R
C
N
37
N
O
N
38
N
C
N
39
N
O
N
40
N
N
N
41
N
C
N
42
N
C
N
43
N
C
N
44
N
O
N
45
N
N
N
46
N
C
N
47
N
C
N
48
N
S
N
49
N
C
Y
50
N
C
Y
51
N
C
Y
52
N
C
Y
53
N
C
N
54
N
O
Y
55
N
C
Y
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
N
N
100
S
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
S
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
C
N
118
N
C
N
119
N
N
N
120
N
C
N
121
N
N
N
122
N
N
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
N
N
140
S
C
N
141
N
C
N
142
N
O
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
N
N
173
R
C
N
174
N
C
N
175
N
O
N
176
N
C
N
177
N
S
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
N
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
O
N
214
N
O
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
N
C
N
227
N
C
N
228
N
O
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
Y
240
N
C
Y
241
N
N
Y
242
N
C
Y
243
N
C
Y
244
N
N
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
S
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
C
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
N
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
S
N
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
N
376
N
C
N
377
N
C
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
N
N
389
S
C
N
390
N
C
N
391
N
O
N
392
N
C
N
393
N
O
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
R
C
N
407
N
O
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
N
Y
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
N
N
447
S
C
N
448
N
C
N
449
N
O
N
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
Y
454
N
C
Y
455
N
C
Y
456
N
C
N
457
N
O
N
458
N
O
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
N
N
471
S
C
N
472
N
C
N
473
N
O
N
474
N
C
N
475
N
C
N
476
N
C
N
477
N
O
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
Y
1
N
sing
Y
2
N
doub
Y
3
N
doub
N
4
N
sing
Y
5
N
sing
Y
6
N
doub
Y
7
N
sing
Y
8
N
sing
Y
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
Y
13
N
doub
Y
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
Y
90
N
doub
Y
91
N
sing
Y
92
N
sing
N
93
N
sing
Y
94
N
doub
N
95
N
sing
N
96
N
sing
Y
97
N
sing
N
98
N
sing
Y
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
Y
241
N
sing
Y
242
N
doub
Y
243
N
doub
N
244
N
sing
Y
245
N
sing
N
246
N
sing
Y
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
doub
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
Y
418
N
doub
Y
419
N
sing
Y
420
N
sing
N
421
N
sing
Y
422
N
doub
Y
423
N
sing
Y
424
N
sing
N
425
N
sing
Y
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
doub
N
430
N
sing
Y
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
Y
446
N
doub
Y
447
N
sing
Y
448
N
sing
N
449
N
sing
Y
450
N
doub
N
451
N
sing
Y
452
N
doub
N
453
N
sing
Y
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
doub
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
277
27468
27476
10.1074/jbc.M203904200
11997398
X-ray crystallographic analyses of inhibitor and substrate complexes of wild-type and mutant 4-hydroxybenzoyl-CoA thioesterase.
2002
10.2210/pdb1lo8/pdb
pdb_00001lo8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
goebel mirrors
AREA DETECTOR
2001-11-08
SIEMENS HI-STAR
goebel mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
16140.452
4-hydroxybenzoyl-CoA Thioesterase
3.1.2.23
1
man
polymer
873.656
4-HYDROXYBENZYL COENZYME A
1
syn
non-polymer
18.015
water
111
nat
water
E.C.3.1.2.23
no
no
MARSITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTI
ETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELCS
MARSITMQQRIEFGDCDPAGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTI
ETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELCS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CBS-3
Escherichia
sample
4HBT_PSESP
72586
Pseudomonas sp. CBS3
562
Escherichia coli
HMS174(DE3)
Plasmid
pET-3a
1
1.94
36.72
batch
5.0
PEG 8000, potassium chloride, succinate, 4-hydroxybenzyl CoA, pH 5.0, batch at 277K
277
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-05-17
1
1
2008-04-28
1
2
2011-07-13
1
3
2017-10-11
1
4
2023-08-16
_software.classification
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2002-05-06
REL
REL
4CA
4-HYDROXYBENZYL COENZYME A
HOH
water
1BVQ
PDB ENTRY 1BVQ
PDB
experimental model
4CA
170
2
4CA
4CA
170
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
258
3
HOH
HOH
258
A
HOH
259
3
HOH
HOH
259
A
HOH
260
3
HOH
HOH
260
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
264
3
HOH
HOH
264
A
HOH
265
3
HOH
HOH
265
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
268
3
HOH
HOH
268
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
274
3
HOH
HOH
274
A
HOH
275
3
HOH
HOH
275
A
HOH
276
3
HOH
HOH
276
A
HOH
277
3
HOH
HOH
277
A
HOH
278
3
HOH
HOH
278
A
HOH
279
3
HOH
HOH
279
A
HOH
280
3
HOH
HOH
280
A
HOH
281
3
HOH
HOH
281
A
HOH
282
3
HOH
HOH
282
A
HOH
283
3
HOH
HOH
283
A
HOH
284
3
HOH
HOH
284
A
HOH
285
3
HOH
HOH
285
A
HOH
286
3
HOH
HOH
286
A
HOH
287
3
HOH
HOH
287
A
HOH
288
3
HOH
HOH
288
A
HOH
289
3
HOH
HOH
289
A
HOH
290
3
HOH
HOH
290
A
HOH
291
3
HOH
HOH
291
A
HOH
292
3
HOH
HOH
292
A
HOH
293
3
HOH
HOH
293
A
HOH
294
3
HOH
HOH
294
A
HOH
295
3
HOH
HOH
295
A
HOH
296
3
HOH
HOH
296
A
HOH
297
3
HOH
HOH
297
A
HOH
298
3
HOH
HOH
298
A
HOH
299
3
HOH
HOH
299
A
HOH
300
3
HOH
HOH
300
A
HOH
301
3
HOH
HOH
301
A
HOH
302
3
HOH
HOH
302
A
HOH
303
3
HOH
HOH
303
A
HOH
304
3
HOH
HOH
304
A
HOH
305
3
HOH
HOH
305
A
HOH
306
3
HOH
HOH
306
A
HOH
307
3
HOH
HOH
307
A
HOH
308
3
HOH
HOH
308
A
HOH
309
3
HOH
HOH
309
A
HOH
310
3
HOH
HOH
310
A
n
1
1
A
ALA
2
n
2
ALA
2
A
ARG
3
n
3
ARG
3
A
SER
4
n
4
SER
4
A
ILE
5
n
5
ILE
5
A
THR
6
n
6
THR
6
A
MET
7
n
7
MET
7
A
GLN
8
n
8
GLN
8
A
GLN
9
n
9
GLN
9
A
ARG
10
n
10
ARG
10
A
ILE
11
n
11
ILE
11
A
GLU
12
n
12
GLU
12
A
PHE
13
n
13
PHE
13
A
GLY
14
n
14
GLY
14
A
ASP
15
n
15
ASP
15
A
CYS
16
n
16
CYS
16
A
ASP
17
n
17
ASP
17
A
PRO
18
n
18
PRO
18
A
ALA
19
n
19
ALA
19
A
GLY
20
n
20
GLY
20
A
ILE
21
n
21
ILE
21
A
VAL
22
n
22
VAL
22
A
TRP
23
n
23
TRP
23
A
TYR
24
n
24
TYR
24
A
PRO
25
n
25
PRO
25
A
ASN
26
n
26
ASN
26
A
TYR
27
n
27
TYR
27
A
HIS
28
n
28
HIS
28
A
ARG
29
n
29
ARG
29
A
TRP
30
n
30
TRP
30
A
LEU
31
n
31
LEU
31
A
ASP
32
n
32
ASP
32
A
ALA
33
n
33
ALA
33
A
ALA
34
n
34
ALA
34
A
SER
35
n
35
SER
35
A
ARG
36
n
36
ARG
36
A
ASN
37
n
37
ASN
37
A
TYR
38
n
38
TYR
38
A
PHE
39
n
39
PHE
39
A
ILE
40
n
40
ILE
40
A
LYS
41
n
41
LYS
41
A
CYS
42
n
42
CYS
42
A
GLY
43
n
43
GLY
43
A
LEU
44
n
44
LEU
44
A
PRO
45
n
45
PRO
45
A
PRO
46
n
46
PRO
46
A
TRP
47
n
47
TRP
47
A
ARG
48
n
48
ARG
48
A
GLN
49
n
49
GLN
49
A
THR
50
n
50
THR
50
A
VAL
51
n
51
VAL
51
A
VAL
52
n
52
VAL
52
A
GLU
53
n
53
GLU
53
A
ARG
54
n
54
ARG
54
A
GLY
55
n
55
GLY
55
A
ILE
56
n
56
ILE
56
A
VAL
57
n
57
VAL
57
A
GLY
58
n
58
GLY
58
A
THR
59
n
59
THR
59
A
PRO
60
n
60
PRO
60
A
ILE
61
n
61
ILE
61
A
VAL
62
n
62
VAL
62
A
SER
63
n
63
SER
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ALA
66
n
66
ALA
66
A
SER
67
n
67
SER
67
A
PHE
68
n
68
PHE
68
A
VAL
69
n
69
VAL
69
A
CYS
70
n
70
CYS
70
A
THR
71
n
71
THR
71
A
ALA
72
n
72
ALA
72
A
SER
73
n
73
SER
73
A
TYR
74
n
74
TYR
74
A
ASP
75
n
75
ASP
75
A
ASP
76
n
76
ASP
76
A
VAL
77
n
77
VAL
77
A
LEU
78
n
78
LEU
78
A
THR
79
n
79
THR
79
A
ILE
80
n
80
ILE
80
A
GLU
81
n
81
GLU
81
A
THR
82
n
82
THR
82
A
CYS
83
n
83
CYS
83
A
ILE
84
n
84
ILE
84
A
LYS
85
n
85
LYS
85
A
GLU
86
n
86
GLU
86
A
TRP
87
n
87
TRP
87
A
ARG
88
n
88
ARG
88
A
ARG
89
n
89
ARG
89
A
LYS
90
n
90
LYS
90
A
SER
91
n
91
SER
91
A
PHE
92
n
92
PHE
92
A
VAL
93
n
93
VAL
93
A
GLN
94
n
94
GLN
94
A
ARG
95
n
95
ARG
95
A
HIS
96
n
96
HIS
96
A
SER
97
n
97
SER
97
A
VAL
98
n
98
VAL
98
A
SER
99
n
99
SER
99
A
ARG
100
n
100
ARG
100
A
THR
101
n
101
THR
101
A
THR
102
n
102
THR
102
A
PRO
103
n
103
PRO
103
A
GLY
104
n
104
GLY
104
A
GLY
105
n
105
GLY
105
A
ASP
106
n
106
ASP
106
A
VAL
107
n
107
VAL
107
A
GLN
108
n
108
GLN
108
A
LEU
109
n
109
LEU
109
A
VAL
110
n
110
VAL
110
A
MET
111
n
111
MET
111
A
ARG
112
n
112
ARG
112
A
ALA
113
n
113
ALA
113
A
ASP
114
n
114
ASP
114
A
GLU
115
n
115
GLU
115
A
ILE
116
n
116
ILE
116
A
ARG
117
n
117
ARG
117
A
VAL
118
n
118
VAL
118
A
PHE
119
n
119
PHE
119
A
ALA
120
n
120
ALA
120
A
MET
121
n
121
MET
121
A
ASN
122
n
122
ASN
122
A
ASP
123
n
123
ASP
123
A
GLY
124
n
124
GLY
124
A
GLU
125
n
125
GLU
125
A
ARG
126
n
126
ARG
126
A
LEU
127
n
127
LEU
127
A
ARG
128
n
128
ARG
128
A
ALA
129
n
129
ALA
129
A
ILE
130
n
130
ILE
130
A
GLU
131
n
131
GLU
131
A
VAL
132
n
132
VAL
132
A
PRO
133
n
133
PRO
133
A
ALA
134
n
134
ALA
134
A
ASP
135
n
135
ASP
135
A
TYR
136
n
136
TYR
136
A
ILE
137
n
137
ILE
137
A
GLU
138
n
138
GLU
138
A
LEU
139
n
139
LEU
139
A
CYS
140
n
140
CYS
140
A
SER
141
n
141
SER
141
A
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_655
-x+1,-y,z
crystal symmetry operation
49.4000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_655
-x+1,y,-z
crystal symmetry operation
49.4000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
9
A
N
GLN
9
A
O
LEU
78
A
O
LEU
78
A
N
GLU
81
A
N
GLU
81
A
O
SER
97
A
O
SER
97
A
N
GLN
94
A
N
GLN
94
A
O
GLU
115
A
O
GLU
115
A
O
ILE
116
A
O
ILE
116
A
N
SER
63
A
N
SER
63
A
N
GLY
58
A
N
GLY
58
A
O
ALA
120
A
O
ALA
120
A
N
ASP
123
A
N
ASP
123
A
O
ARG
126
A
O
ARG
126
1
A
MET
1
A
MET
1
1
Y
1
14.52
1.50
110.10
124.62
A
A
A
CB
CA
C
ALA
ALA
ALA
2
2
2
N
1
3.03
0.50
120.30
123.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
3
3
3
N
1
18.28
2.10
111.80
130.08
A
A
A
CG
CD
NE
ARG
ARG
ARG
10
10
10
N
1
-7.60
0.90
118.30
110.70
A
A
A
CB
CG
OD2
ASP
ASP
ASP
17
17
17
N
1
3.86
0.50
120.30
124.16
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
48
48
48
N
1
3.06
0.50
120.30
123.36
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
54
54
54
N
1
-5.74
0.90
118.30
112.56
A
A
A
CB
CG
OD2
ASP
ASP
ASP
75
75
75
N
1
-5.67
0.90
118.30
112.63
A
A
A
CB
CG
OD2
ASP
ASP
ASP
106
106
106
N
1
5.43
0.90
118.30
123.73
A
A
A
CB
CG
OD1
ASP
ASP
ASP
114
114
114
N
1
-5.54
0.90
118.30
112.76
A
A
A
CB
CG
OD2
ASP
ASP
ASP
114
114
114
N
1
4.05
0.50
120.30
124.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
117
117
117
N
1
-6.87
0.90
118.30
111.43
A
A
A
CB
CG
OD2
ASP
ASP
ASP
123
123
123
N
1
-5.59
0.90
118.30
112.71
A
A
A
CB
CG
OD2
ASP
ASP
ASP
135
135
135
N
1
A
A
O
O
HOH
HOH
279
279
1.47
1_555
2_655
1
A
A
O
O
HOH
HOH
270
270
1.74
1_555
2_655
1
A
ASP
75
93.42
-30.42
1
A
ARG
88
-126.32
-162.39
0.2470000
0.1920000
0.1930000
0.1930000
1.80
30.0
1179
11789
11789
98.0
random
1
0
0
MOLECULAR REPLACEMENT
PDB ENTRY 1BVQ
Engh & Huber
1.80
30.0
111
1294
56
0
1127
0.013
2.47
1.80
30.0
1LO8
11789
11789
0
0
0.0510000
1
19.2
3.3
98.0
1.80
1.88
2.7
1352
0.2610000
2.3
91.2
phasing
AMoRE
refinement
TNT
5F
data collection
FRAMBO
data scaling
SAINT
X-ray crystal structure of 4-hydroxybenzoyl CoA thioesterase complexed with 4-hydroxybenzyl CoA
1
N
N
2
N
N
3
N
N
The biological assemble is a homotetramer.
The independent monomer in the crystallographic independent unit sits on 222 site symmetry.
Matrices to generage the tetramer are as follows:
(1) -1 0 0
0 -1 0
0 0 1
49.4 0.0 0.0
(2) -1 0 0
0 1 0
0 0 -1
49.4 0.0 0.0
(3) 1 0 0
0 -1 0
0 0 -1
0.0 0.0 0.0
A
GLU
12
A
GLU
12
HELX_P
A
CYS
16
A
CYS
16
5
1
5
A
TYR
24
A
TYR
24
HELX_P
A
CYS
42
A
CYS
42
1
2
19
A
PRO
46
A
PRO
46
HELX_P
A
ARG
54
A
ARG
54
1
3
9
A
PRO
133
A
PRO
133
HELX_P
A
SER
141
A
SER
141
1
4
9
HYDROLASE
Thioesterase, hot dog fold, catalytic mechanism, HYDROLASE
4HBT_PSEUC
UNP
1
1
P56653
MARSITMQQRIEFGDCDPAGIVWFPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTI
ETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFAMNDGERLRAIEVPADYIELCS
1
141
1LO8
1
141
P56653
A
1
1
141
1
PHE
conflict
TYR
24
1LO8
A
P56653
UNP
24
24
5
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
4
A
SER
4
A
ARG
10
A
ARG
10
A
VAL
77
A
VAL
77
A
TRP
87
A
TRP
87
A
PHE
92
A
PHE
92
A
THR
101
A
THR
101
A
VAL
107
A
VAL
107
A
ARG
117
A
ARG
117
A
ILE
61
A
ILE
61
A
PHE
68
A
PHE
68
A
ILE
56
A
ILE
56
A
GLY
58
A
GLY
58
A
PHE
119
A
PHE
119
A
ASP
123
A
ASP
123
A
ARG
126
A
ARG
126
A
ILE
130
A
ILE
130
BINDING SITE FOR RESIDUE 4CA A 170
A
4CA
170
Software
32
A
ALA
2
A
ALA
2
32
8_555
A
ARG
3
A
ARG
3
32
8_555
A
PHE
13
A
PHE
13
32
4_555
A
ASP
17
A
ASP
17
32
2_655
A
VAL
22
A
VAL
22
32
2_655
A
ASP
32
A
ASP
32
32
1_555
A
TRP
47
A
TRP
47
32
1_555
A
GLY
58
A
GLY
58
32
1_555
A
THR
59
A
THR
59
32
1_555
A
ILE
61
A
ILE
61
32
1_555
A
VAL
62
A
VAL
62
32
1_555
A
SER
63
A
SER
63
32
1_555
A
PHE
68
A
PHE
68
32
2_655
A
VAL
69
A
VAL
69
32
2_655
A
CYS
70
A
CYS
70
32
2_655
A
THR
71
A
THR
71
32
2_655
A
ARG
89
A
ARG
89
32
1_555
A
LYS
90
A
LYS
90
32
1_555
A
SER
91
A
SER
91
32
1_555
A
ILE
116
A
ILE
116
32
1_555
A
ARG
117
A
ARG
117
32
1_555
A
VAL
118
A
VAL
118
32
1_555
A
LEU
127
A
LEU
127
32
1_555
A
ALA
129
A
ALA
129
32
1_555
A
GLU
138
A
GLU
138
32
8_555
A
SER
141
A
SER
141
32
8_555
A
HOH
206
C
HOH
32
1_555
A
HOH
216
C
HOH
32
1_555
A
HOH
217
C
HOH
32
2_655
A
HOH
227
C
HOH
32
2_655
A
HOH
240
C
HOH
32
7_555
A
HOH
248
C
HOH
32
2_655
23
orthorhombic
I 2 2 2