0.026975
-0.000000
0.007380
0.000000
0.012729
-0.000000
0.000000
0.000000
0.024295
0.00000
0.00000
0.00000
Kurinov, I.V.
Rajamohan, F.
Uckun, F.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
105.301
90.000
37.071
78.559
42.674
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
S
C
N
145
N
C
N
146
N
C
N
147
N
C
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
N
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
S
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
Y
234
N
C
Y
235
N
C
Y
236
N
C
Y
237
N
C
Y
238
N
C
Y
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
O
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
R
C
N
288
N
O
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
N
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
N
338
N
O
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
Y
227
N
doub
Y
228
N
sing
Y
229
N
sing
N
230
N
sing
Y
231
N
doub
N
232
N
sing
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
Y
296
N
doub
Y
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
Y
324
N
doub
Y
325
N
sing
Y
326
N
sing
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
GE
Arzneimittelforschung
0004-4172
54
692
702
15553110
High resolution X-ray structure and potent anti-HIV activity of recombinant dianthin antiviral protein.
2004
10.2210/pdb1lp8/pdb
pdb_00001lp8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
290.
1
IMAGE PLATE
2000-12-25
RIGAKU RAXIS IV
YALE MIRRORS
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU RU300
28603.588
DIANTHIN 30
3.2.2.22
1
man
polymer
18.015
water
198
nat
water
Antiviral protein DAP-30, rRNA N-glycosylase, rRNA N-glycosidase, Ribosome-inactivating protein
no
no
ATAYTLNLANPSASQYSSFLDQIRNNVRDTSLIYGGTDVEVIGAPSTTDKFLRLNFQGPRGTVSLGLRRENLYVVAYLAM
DNANVNRAYYFKNQITSAELTALFPEVVVANQKQLEYGEDYQAIEKNAKITTGDQSRKELGLGINLLITMIDGVNKKVRV
VKDEARFLLIAIQMTAEAARFRYIQNLVTKNFPNKFDSENKVIQFQVSWSKISTAIFGDCKNGVFNKDYDFGFGKVRQAK
DLQMGLLKYLGRPK
ATAYTLNLANPSASQYSSFLDQIRNNVRDTSLIYGGTDVEVIGAPSTTDKFLRLNFQGPRGTVSLGLRRENLYVVAYLAM
DNANVNRAYYFKNQITSAELTALFPEVVVANQKQLEYGEDYQAIEKNAKITTGDQSRKELGLGINLLITMIDGVNKKVRV
VKDEARFLLIAIQMTAEAARFRYIQNLVTKNFPNKFDSENKVIQFQVSWSKISTAIFGDCKNGVFNKDYDFGFGKVRQAK
DLQMGLLKYLGRPK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
clove pink
Dianthus
Escherichia
sample
3570
Dianthus caryophyllus
562
Escherichia coli
1
2.10
41.30
VAPOR DIFFUSION, HANGING DROP
8
26% PEG3350, 0.1M CaCl2, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 295K
295
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2004-05-11
1
1
2008-04-28
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
HIGH RESOLUTION STRUCTURE OF RECOMBINANT DIANTHIN ANTIVIRAL
PROTEIN-POTENT ANTI-HIV AGENT (COMPLEX WITH CYCLIC AMP)
HIGH RESOLUTION STRUCTURE OF RECOMBINANT DIANTHIN ANTIVIRAL
PROTEIN-POTENT ANTI-HIV AGENT (COMPLEX WITH ADENINE)
RCSB
Y
RCSB
2002-05-07
REL
HOH
water
WAT
501
2
HOH
HOH
501
A
WAT
502
2
HOH
HOH
502
A
WAT
503
2
HOH
HOH
503
A
WAT
504
2
HOH
HOH
504
A
WAT
505
2
HOH
HOH
505
A
WAT
506
2
HOH
HOH
506
A
WAT
507
2
HOH
HOH
507
A
WAT
508
2
HOH
HOH
508
A
WAT
509
2
HOH
HOH
509
A
WAT
510
2
HOH
HOH
510
A
WAT
511
2
HOH
HOH
511
A
WAT
512
2
HOH
HOH
512
A
WAT
513
2
HOH
HOH
513
A
WAT
514
2
HOH
HOH
514
A
WAT
515
2
HOH
HOH
515
A
WAT
516
2
HOH
HOH
516
A
WAT
517
2
HOH
HOH
517
A
WAT
518
2
HOH
HOH
518
A
WAT
519
2
HOH
HOH
519
A
WAT
520
2
HOH
HOH
520
A
WAT
521
2
HOH
HOH
521
A
WAT
522
2
HOH
HOH
522
A
WAT
523
2
HOH
HOH
523
A
WAT
524
2
HOH
HOH
524
A
WAT
525
2
HOH
HOH
525
A
WAT
526
2
HOH
HOH
526
A
WAT
527
2
HOH
HOH
527
A
WAT
528
2
HOH
HOH
528
A
WAT
529
2
HOH
HOH
529
A
WAT
530
2
HOH
HOH
530
A
WAT
531
2
HOH
HOH
531
A
WAT
532
2
HOH
HOH
532
A
WAT
533
2
HOH
HOH
533
A
WAT
534
2
HOH
HOH
534
A
WAT
535
2
HOH
HOH
535
A
WAT
536
2
HOH
HOH
536
A
WAT
537
2
HOH
HOH
537
A
WAT
538
2
HOH
HOH
538
A
WAT
539
2
HOH
HOH
539
A
WAT
540
2
HOH
HOH
540
A
WAT
541
2
HOH
HOH
541
A
WAT
542
2
HOH
HOH
542
A
WAT
543
2
HOH
HOH
543
A
WAT
544
2
HOH
HOH
544
A
WAT
545
2
HOH
HOH
545
A
WAT
546
2
HOH
HOH
546
A
WAT
547
2
HOH
HOH
547
A
WAT
548
2
HOH
HOH
548
A
WAT
549
2
HOH
HOH
549
A
WAT
550
2
HOH
HOH
550
A
WAT
551
2
HOH
HOH
551
A
WAT
552
2
HOH
HOH
552
A
WAT
553
2
HOH
HOH
553
A
WAT
554
2
HOH
HOH
554
A
WAT
555
2
HOH
HOH
555
A
WAT
556
2
HOH
HOH
556
A
WAT
557
2
HOH
HOH
557
A
WAT
558
2
HOH
HOH
558
A
WAT
559
2
HOH
HOH
559
A
WAT
560
2
HOH
HOH
560
A
WAT
561
2
HOH
HOH
561
A
WAT
562
2
HOH
HOH
562
A
WAT
563
2
HOH
HOH
563
A
WAT
564
2
HOH
HOH
564
A
WAT
565
2
HOH
HOH
565
A
WAT
566
2
HOH
HOH
566
A
WAT
567
2
HOH
HOH
567
A
WAT
568
2
HOH
HOH
568
A
WAT
569
2
HOH
HOH
569
A
WAT
570
2
HOH
HOH
570
A
WAT
571
2
HOH
HOH
571
A
WAT
572
2
HOH
HOH
572
A
WAT
573
2
HOH
HOH
573
A
WAT
574
2
HOH
HOH
574
A
WAT
575
2
HOH
HOH
575
A
WAT
576
2
HOH
HOH
576
A
WAT
577
2
HOH
HOH
577
A
WAT
578
2
HOH
HOH
578
A
WAT
579
2
HOH
HOH
579
A
WAT
580
2
HOH
HOH
580
A
WAT
581
2
HOH
HOH
581
A
WAT
582
2
HOH
HOH
582
A
WAT
583
2
HOH
HOH
583
A
WAT
584
2
HOH
HOH
584
A
WAT
585
2
HOH
HOH
585
A
WAT
586
2
HOH
HOH
586
A
WAT
587
2
HOH
HOH
587
A
WAT
588
2
HOH
HOH
588
A
WAT
589
2
HOH
HOH
589
A
WAT
590
2
HOH
HOH
590
A
WAT
591
2
HOH
HOH
591
A
WAT
592
2
HOH
HOH
592
A
WAT
593
2
HOH
HOH
593
A
WAT
594
2
HOH
HOH
594
A
WAT
595
2
HOH
HOH
595
A
WAT
596
2
HOH
HOH
596
A
WAT
597
2
HOH
HOH
597
A
WAT
598
2
HOH
HOH
598
A
WAT
599
2
HOH
HOH
599
A
WAT
600
2
HOH
HOH
600
A
WAT
601
2
HOH
HOH
601
A
WAT
602
2
HOH
HOH
602
A
WAT
603
2
HOH
HOH
603
A
WAT
604
2
HOH
HOH
604
A
WAT
606
2
HOH
HOH
606
A
WAT
607
2
HOH
HOH
607
A
WAT
608
2
HOH
HOH
608
A
WAT
609
2
HOH
HOH
609
A
WAT
610
2
HOH
HOH
610
A
WAT
611
2
HOH
HOH
611
A
WAT
612
2
HOH
HOH
612
A
WAT
613
2
HOH
HOH
613
A
WAT
614
2
HOH
HOH
614
A
WAT
615
2
HOH
HOH
615
A
WAT
616
2
HOH
HOH
616
A
WAT
617
2
HOH
HOH
617
A
WAT
618
2
HOH
HOH
618
A
WAT
619
2
HOH
HOH
619
A
WAT
620
2
HOH
HOH
620
A
WAT
621
2
HOH
HOH
621
A
WAT
622
2
HOH
HOH
622
A
WAT
623
2
HOH
HOH
623
A
WAT
624
2
HOH
HOH
624
A
WAT
625
2
HOH
HOH
625
A
WAT
626
2
HOH
HOH
626
A
WAT
627
2
HOH
HOH
627
A
WAT
628
2
HOH
HOH
628
A
WAT
629
2
HOH
HOH
629
A
WAT
630
2
HOH
HOH
630
A
WAT
631
2
HOH
HOH
631
A
WAT
632
2
HOH
HOH
632
A
WAT
633
2
HOH
HOH
633
A
WAT
634
2
HOH
HOH
634
A
WAT
635
2
HOH
HOH
635
A
WAT
636
2
HOH
HOH
636
A
WAT
637
2
HOH
HOH
637
A
WAT
638
2
HOH
HOH
638
A
WAT
639
2
HOH
HOH
639
A
WAT
641
2
HOH
HOH
641
A
WAT
642
2
HOH
HOH
642
A
WAT
643
2
HOH
HOH
643
A
WAT
644
2
HOH
HOH
644
A
WAT
645
2
HOH
HOH
645
A
WAT
646
2
HOH
HOH
646
A
WAT
647
2
HOH
HOH
647
A
WAT
648
2
HOH
HOH
648
A
WAT
649
2
HOH
HOH
649
A
WAT
650
2
HOH
HOH
650
A
WAT
651
2
HOH
HOH
651
A
WAT
652
2
HOH
HOH
652
A
WAT
653
2
HOH
HOH
653
A
WAT
654
2
HOH
HOH
654
A
WAT
655
2
HOH
HOH
655
A
WAT
656
2
HOH
HOH
656
A
WAT
657
2
HOH
HOH
657
A
WAT
658
2
HOH
HOH
658
A
WAT
659
2
HOH
HOH
659
A
WAT
660
2
HOH
HOH
660
A
WAT
661
2
HOH
HOH
661
A
WAT
662
2
HOH
HOH
662
A
WAT
663
2
HOH
HOH
663
A
WAT
664
2
HOH
HOH
664
A
WAT
665
2
HOH
HOH
665
A
WAT
666
2
HOH
HOH
666
A
WAT
667
2
HOH
HOH
667
A
WAT
668
2
HOH
HOH
668
A
WAT
669
2
HOH
HOH
669
A
WAT
670
2
HOH
HOH
670
A
WAT
671
2
HOH
HOH
671
A
WAT
672
2
HOH
HOH
672
A
WAT
673
2
HOH
HOH
673
A
WAT
674
2
HOH
HOH
674
A
WAT
675
2
HOH
HOH
675
A
WAT
676
2
HOH
HOH
676
A
WAT
677
2
HOH
HOH
677
A
WAT
678
2
HOH
HOH
678
A
WAT
679
2
HOH
HOH
679
A
WAT
680
2
HOH
HOH
680
A
WAT
681
2
HOH
HOH
681
A
WAT
682
2
HOH
HOH
682
A
WAT
683
2
HOH
HOH
683
A
WAT
684
2
HOH
HOH
684
A
WAT
685
2
HOH
HOH
685
A
WAT
686
2
HOH
HOH
686
A
WAT
687
2
HOH
HOH
687
A
WAT
688
2
HOH
HOH
688
A
WAT
689
2
HOH
HOH
689
A
WAT
690
2
HOH
HOH
690
A
WAT
691
2
HOH
HOH
691
A
WAT
692
2
HOH
HOH
692
A
WAT
693
2
HOH
HOH
693
A
WAT
694
2
HOH
HOH
694
A
WAT
695
2
HOH
HOH
695
A
WAT
696
2
HOH
HOH
696
A
WAT
697
2
HOH
HOH
697
A
WAT
698
2
HOH
HOH
698
A
WAT
699
2
HOH
HOH
699
A
WAT
700
2
HOH
HOH
700
A
ALA
1
n
1
ALA
1
A
THR
2
n
2
THR
2
A
ALA
3
n
3
ALA
3
A
TYR
4
n
4
TYR
4
A
THR
5
n
5
THR
5
A
LEU
6
n
6
LEU
6
A
ASN
7
n
7
ASN
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ASN
10
n
10
ASN
10
A
PRO
11
n
11
PRO
11
A
SER
12
n
12
SER
12
A
ALA
13
n
13
ALA
13
A
SER
14
n
14
SER
14
A
GLN
15
n
15
GLN
15
A
TYR
16
n
16
TYR
16
A
SER
17
n
17
SER
17
A
SER
18
n
18
SER
18
A
PHE
19
n
19
PHE
19
A
LEU
20
n
20
LEU
20
A
ASP
21
n
21
ASP
21
A
GLN
22
n
22
GLN
22
A
ILE
23
n
23
ILE
23
A
ARG
24
n
24
ARG
24
A
ASN
25
n
25
ASN
25
A
ASN
26
n
26
ASN
26
A
VAL
27
n
27
VAL
27
A
ARG
28
n
28
ARG
28
A
ASP
29
n
29
ASP
29
A
THR
30
n
30
THR
30
A
SER
31
n
31
SER
31
A
LEU
32
n
32
LEU
32
A
ILE
33
n
33
ILE
33
A
TYR
34
n
34
TYR
34
A
GLY
35
n
35
GLY
35
A
GLY
36
n
36
GLY
36
A
THR
37
n
37
THR
37
A
ASP
38
n
38
ASP
38
A
VAL
39
n
39
VAL
39
A
GLU
40
n
40
GLU
40
A
VAL
41
n
41
VAL
41
A
ILE
42
n
42
ILE
42
A
GLY
43
n
43
GLY
43
A
ALA
44
n
44
ALA
44
A
PRO
45
n
45
PRO
45
A
SER
46
n
46
SER
46
A
THR
47
n
47
THR
47
A
THR
48
n
48
THR
48
A
ASP
49
n
49
ASP
49
A
LYS
50
n
50
LYS
50
A
PHE
51
n
51
PHE
51
A
LEU
52
n
52
LEU
52
A
ARG
53
n
53
ARG
53
A
LEU
54
n
54
LEU
54
A
ASN
55
n
55
ASN
55
A
PHE
56
n
56
PHE
56
A
GLN
57
n
57
GLN
57
A
GLY
58
n
58
GLY
58
A
PRO
59
n
59
PRO
59
A
ARG
60
n
60
ARG
60
A
GLY
61
n
61
GLY
61
A
THR
62
n
62
THR
62
A
VAL
63
n
63
VAL
63
A
SER
64
n
64
SER
64
A
LEU
65
n
65
LEU
65
A
GLY
66
n
66
GLY
66
A
LEU
67
n
67
LEU
67
A
ARG
68
n
68
ARG
68
A
ARG
69
n
69
ARG
69
A
GLU
70
n
70
GLU
70
A
ASN
71
n
71
ASN
71
A
LEU
72
n
72
LEU
72
A
TYR
73
n
73
TYR
73
A
VAL
74
n
74
VAL
74
A
VAL
75
n
75
VAL
75
A
ALA
76
n
76
ALA
76
A
TYR
77
n
77
TYR
77
A
LEU
78
n
78
LEU
78
A
ALA
79
n
79
ALA
79
A
MET
80
n
80
MET
80
A
ASP
81
n
81
ASP
81
A
ASN
82
n
82
ASN
82
A
ALA
83
n
83
ALA
83
A
ASN
84
n
84
ASN
84
A
VAL
85
n
85
VAL
85
A
ASN
86
n
86
ASN
86
A
ARG
87
n
87
ARG
87
A
ALA
88
n
88
ALA
88
A
TYR
89
n
89
TYR
89
A
TYR
90
n
90
TYR
90
A
PHE
91
n
91
PHE
91
A
LYS
92
n
92
LYS
92
A
ASN
93
n
93
ASN
93
A
GLN
94
n
94
GLN
94
A
ILE
95
n
95
ILE
95
A
THR
96
n
96
THR
96
A
SER
97
n
97
SER
97
A
ALA
98
n
98
ALA
98
A
GLU
99
n
99
GLU
99
A
LEU
100
n
100
LEU
100
A
THR
101
n
101
THR
101
A
ALA
102
n
102
ALA
102
A
LEU
103
n
103
LEU
103
A
PHE
104
n
104
PHE
104
A
PRO
105
n
105
PRO
105
A
GLU
106
n
106
GLU
106
A
VAL
107
n
107
VAL
107
A
VAL
108
n
108
VAL
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
ASN
111
n
111
ASN
111
A
GLN
112
n
112
GLN
112
A
LYS
113
n
113
LYS
113
A
GLN
114
n
114
GLN
114
A
LEU
115
n
115
LEU
115
A
GLU
116
n
116
GLU
116
A
TYR
117
n
117
TYR
117
A
GLY
118
n
118
GLY
118
A
GLU
119
n
119
GLU
119
A
ASP
120
n
120
ASP
120
A
TYR
121
n
121
TYR
121
A
GLN
122
n
122
GLN
122
A
ALA
123
n
123
ALA
123
A
ILE
124
n
124
ILE
124
A
GLU
125
n
125
GLU
125
A
LYS
126
n
126
LYS
126
A
ASN
127
n
127
ASN
127
A
ALA
128
n
128
ALA
128
A
LYS
129
n
129
LYS
129
A
ILE
130
n
130
ILE
130
A
THR
131
n
131
THR
131
A
THR
132
n
132
THR
132
A
GLY
133
n
133
GLY
133
A
ASP
134
n
134
ASP
134
A
GLN
135
n
135
GLN
135
A
SER
136
n
136
SER
136
A
ARG
137
n
137
ARG
137
A
LYS
138
n
138
LYS
138
A
GLU
139
n
139
GLU
139
A
LEU
140
n
140
LEU
140
A
GLY
141
n
141
GLY
141
A
LEU
142
n
142
LEU
142
A
GLY
143
n
143
GLY
143
A
ILE
144
n
144
ILE
144
A
ASN
145
n
145
ASN
145
A
LEU
146
n
146
LEU
146
A
LEU
147
n
147
LEU
147
A
ILE
148
n
148
ILE
148
A
THR
149
n
149
THR
149
A
MET
150
n
150
MET
150
A
ILE
151
n
151
ILE
151
A
ASP
152
n
152
ASP
152
A
GLY
153
n
153
GLY
153
A
VAL
154
n
154
VAL
154
A
ASN
155
n
155
ASN
155
A
LYS
156
n
156
LYS
156
A
LYS
157
n
157
LYS
157
A
VAL
158
n
158
VAL
158
A
ARG
159
n
159
ARG
159
A
VAL
160
n
160
VAL
160
A
VAL
161
n
161
VAL
161
A
LYS
162
n
162
LYS
162
A
ASP
163
n
163
ASP
163
A
GLU
164
n
164
GLU
164
A
ALA
165
n
165
ALA
165
A
ARG
166
n
166
ARG
166
A
PHE
167
n
167
PHE
167
A
LEU
168
n
168
LEU
168
A
LEU
169
n
169
LEU
169
A
ILE
170
n
170
ILE
170
A
ALA
171
n
171
ALA
171
A
ILE
172
n
172
ILE
172
A
GLN
173
n
173
GLN
173
A
MET
174
n
174
MET
174
A
THR
175
n
175
THR
175
A
ALA
176
n
176
ALA
176
A
GLU
177
n
177
GLU
177
A
ALA
178
n
178
ALA
178
A
ALA
179
n
179
ALA
179
A
ARG
180
n
180
ARG
180
A
PHE
181
n
181
PHE
181
A
ARG
182
n
182
ARG
182
A
TYR
183
n
183
TYR
183
A
ILE
184
n
184
ILE
184
A
GLN
185
n
185
GLN
185
A
ASN
186
n
186
ASN
186
A
LEU
187
n
187
LEU
187
A
VAL
188
n
188
VAL
188
A
THR
189
n
189
THR
189
A
LYS
190
n
190
LYS
190
A
ASN
191
n
191
ASN
191
A
PHE
192
n
192
PHE
192
A
PRO
193
n
193
PRO
193
A
ASN
194
n
194
ASN
194
A
LYS
195
n
195
LYS
195
A
PHE
196
n
196
PHE
196
A
ASP
197
n
197
ASP
197
A
SER
198
n
198
SER
198
A
GLU
199
n
199
GLU
199
A
ASN
200
n
200
ASN
200
A
LYS
201
n
201
LYS
201
A
VAL
202
n
202
VAL
202
A
ILE
203
n
203
ILE
203
A
GLN
204
n
204
GLN
204
A
PHE
205
n
205
PHE
205
A
GLN
206
n
206
GLN
206
A
VAL
207
n
207
VAL
207
A
SER
208
n
208
SER
208
A
TRP
209
n
209
TRP
209
A
SER
210
n
210
SER
210
A
LYS
211
n
211
LYS
211
A
ILE
212
n
212
ILE
212
A
SER
213
n
213
SER
213
A
THR
214
n
214
THR
214
A
ALA
215
n
215
ALA
215
A
ILE
216
n
216
ILE
216
A
PHE
217
n
217
PHE
217
A
GLY
218
n
218
GLY
218
A
ASP
219
n
219
ASP
219
A
CYS
220
n
220
CYS
220
A
LYS
221
n
221
LYS
221
A
ASN
222
n
222
ASN
222
A
GLY
223
n
223
GLY
223
A
VAL
224
n
224
VAL
224
A
PHE
225
n
225
PHE
225
A
ASN
226
n
226
ASN
226
A
LYS
227
n
227
LYS
227
A
ASP
228
n
228
ASP
228
A
TYR
229
n
229
TYR
229
A
ASP
230
n
230
ASP
230
A
PHE
231
n
231
PHE
231
A
GLY
232
n
232
GLY
232
A
PHE
233
n
233
PHE
233
A
GLY
234
n
234
GLY
234
A
LYS
235
n
235
LYS
235
A
VAL
236
n
236
VAL
236
A
ARG
237
n
237
ARG
237
A
GLN
238
n
238
GLN
238
A
ALA
239
n
239
ALA
239
A
LYS
240
n
240
LYS
240
A
ASP
241
n
241
ASP
241
A
LEU
242
n
242
LEU
242
A
GLN
243
n
243
GLN
243
A
MET
244
n
244
MET
244
A
GLY
245
n
245
GLY
245
A
LEU
246
n
246
LEU
246
A
LEU
247
n
247
LEU
247
A
LYS
248
n
248
LYS
248
A
TYR
249
n
249
TYR
249
A
LEU
250
n
250
LEU
250
A
GLY
251
n
251
GLY
251
A
ARG
252
n
252
ARG
252
A
PRO
253
n
253
PRO
253
A
LYS
254
n
254
LYS
254
A
0.186
0.18
0.23
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
6
A
N
LEU
6
A
O
ASN
55
A
O
ASN
55
A
N
PHE
56
A
N
PHE
56
A
O
VAL
63
A
O
VAL
63
A
N
GLY
66
A
N
GLY
66
A
O
ALA
76
A
O
ALA
76
A
N
TYR
77
A
N
TYR
77
A
O
TYR
89
A
O
TYR
89
A
N
ALA
88
A
N
ALA
88
A
O
LYS
113
A
O
LYS
113
A
N
GLU
40
A
N
GLU
40
A
O
LEU
247
A
O
LEU
247
A
N
LYS
221
A
N
LYS
221
A
O
VAL
224
A
O
VAL
224
A
N
TYR
229
A
N
TYR
229
A
O
VAL
236
A
O
VAL
236
1
A
ASN
71
-151.45
1.67
1
A
THR
175
-116.11
-77.19
1
A
ASP
219
-146.35
38.54
19.5
0.23
0.18
0.186
0.186
1.65
8.00
2651
26609
26427
10
RANDOM
1
Isotropic
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
HOMOLOGY MODELING
Engh & Huber
1.65
8.00
198
2214
0
0
2016
0.005
1.116
0.951
1.65
20.00
1LP8
28432
26801
0.00
0.00
0.049
1
46.9
94.3
0.107
1.65
1.71
70.8
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
refinement
X-PLOR
3.851
phasing
X-PLOR
HIGH RESOLUTION STRUCTURE OF RECOMBINANT DIANTHIN ANTIVIRAL PROTEIN-POTENT ANTI-HIV AGENT
1
N
N
2
N
N
A
SER
12
A
SER
12
HELX_P
A
ARG
28
A
ARG
28
1
1
17
A
THR
96
A
THR
96
HELX_P
A
PHE
104
A
PHE
104
1
2
9
A
VAL
108
A
VAL
108
HELX_P
A
ALA
110
A
ALA
110
5
3
3
A
ASP
120
A
ASP
120
HELX_P
A
LYS
129
A
LYS
129
1
4
10
A
SER
136
A
SER
136
HELX_P
A
GLY
141
A
GLY
141
5
5
6
A
GLY
143
A
GLY
143
HELX_P
A
GLY
153
A
GLY
153
1
6
11
A
VAL
160
A
VAL
160
HELX_P
A
THR
175
A
THR
175
1
7
16
A
THR
175
A
THR
175
HELX_P
A
PHE
181
A
PHE
181
1
8
7
A
PHE
181
A
PHE
181
HELX_P
A
ASN
191
A
ASN
191
1
9
11
A
GLU
199
A
GLU
199
HELX_P
A
SER
208
A
SER
208
1
10
10
A
SER
208
A
SER
208
HELX_P
A
ASP
219
A
ASP
219
1
11
12
A
LYS
240
A
LYS
240
HELX_P
A
GLN
243
A
GLN
243
5
12
4
ANTIVIRAL PROTEIN
DIANTHIN ANTIVIRAL PROTEIN, RIBOSOME INACTIVATING PROTEIN, ANTI-HIV AGENT, HIV-1 INTEGRASE INHIBITOR, POLYNUCLEOTIDE:ADENOSINE GLYCOSIDASE, ANTIVIRAL PROTEIN
A
PHE
192
A
PHE
192
1
A
PRO
193
A
PRO
193
0.12
RIP0_DIACA
UNP
1
24
P24476
ATAYTLNLANPSASQYSSFLDQIRNNVRDTSLIYGGTDVEVIGAPSTTDKFLRLNFQGPRGTVSLGLRRENLYVVAYLAM
DNANVNRAYYFKNQITSAELTALFPEVVVANQKQLEYGEDYQAIEKNAKITTGDQSRKELGLGINLLITMIDGVNKKVRV
VKDEARFLLIAIQMTAEAARFRYIQNLVTKNFPNKFDSENKVIQFQVSWSKISTAIFGDCKNGVFNKDYDFGFGKVRQAK
DLQMGLLKYLGRPK
24
277
1LP8
1
254
P24476
A
1
1
254
6
2
3
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
A
ALA
3
A
ALA
3
A
ASN
7
A
ASN
7
A
PHE
51
A
PHE
51
A
GLY
58
A
GLY
58
A
GLY
61
A
GLY
61
A
ARG
68
A
ARG
68
A
VAL
74
A
VAL
74
A
MET
80
A
MET
80
A
ASN
86
A
ASN
86
A
TYR
90
A
TYR
90
A
GLN
112
A
GLN
112
A
GLN
114
A
GLN
114
A
GLU
40
A
GLU
40
A
VAL
41
A
VAL
41
A
LEU
246
A
LEU
246
A
LEU
247
A
LEU
247
A
CYS
220
A
CYS
220
A
LYS
221
A
LYS
221
A
VAL
224
A
VAL
224
A
ASP
230
A
ASP
230
A
LYS
235
A
LYS
235
A
GLN
238
A
GLN
238
4
P 1 21 1