0.012610 0.000000 0.000000 0.000000 0.012610 0.000000 0.000000 0.000000 0.026596 0.00000 0.00000 0.00000 TWO ALTERNATIVE CONFORMATIONS MODELLED FOR RESIDUE VAL 109. Johnson, L.N. Hadfield, A.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 79.300 79.300 37.600 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 243 856 872 10.1006/jmbi.1994.1688 7966306 Crystal structure of the mutant D52S hen egg white lysozyme with an oligosaccharide product. 1994 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 16229.650 HEN EGG WHITE LYSOZYME 3.2.1.17 1 man polymer 18.015 water 139 nat water no no MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTSYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTSYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chicken Gallus sample 9031 EGG Gallus gallus 1.82 32.45 repository Initial release Version format compliance Version format compliance 1 0 1995-01-26 1 1 2008-03-24 1 2 2011-07-13 Y 1994-09-27 REL HOH water HOH 130 2 HOH HOH 130 A HOH 131 2 HOH HOH 131 A HOH 132 2 HOH HOH 132 A HOH 133 2 HOH HOH 133 A HOH 136 2 HOH HOH 136 A HOH 137 2 HOH HOH 137 A HOH 138 2 HOH HOH 138 A HOH 139 2 HOH HOH 139 A HOH 141 2 HOH HOH 141 A HOH 142 2 HOH HOH 142 A HOH 143 2 HOH HOH 143 A HOH 144 2 HOH HOH 144 A HOH 145 2 HOH HOH 145 A HOH 147 2 HOH HOH 147 A HOH 148 2 HOH HOH 148 A HOH 150 2 HOH HOH 150 A HOH 152 2 HOH HOH 152 A HOH 156 2 HOH HOH 156 A HOH 160 2 HOH HOH 160 A HOH 162 2 HOH HOH 162 A HOH 167 2 HOH HOH 167 A HOH 180 2 HOH HOH 180 A HOH 195 2 HOH HOH 195 A HOH 200 2 HOH HOH 200 A HOH 201 2 HOH HOH 201 A HOH 202 2 HOH HOH 202 A HOH 203 2 HOH HOH 203 A HOH 205 2 HOH HOH 205 A HOH 206 2 HOH HOH 206 A HOH 207 2 HOH HOH 207 A HOH 209 2 HOH HOH 209 A HOH 210 2 HOH HOH 210 A HOH 211 2 HOH HOH 211 A HOH 212 2 HOH HOH 212 A HOH 213 2 HOH HOH 213 A HOH 214 2 HOH HOH 214 A HOH 216 2 HOH HOH 216 A HOH 217 2 HOH HOH 217 A HOH 218 2 HOH HOH 218 A HOH 219 2 HOH HOH 219 A HOH 221 2 HOH HOH 221 A HOH 222 2 HOH HOH 222 A HOH 223 2 HOH HOH 223 A HOH 224 2 HOH HOH 224 A HOH 226 2 HOH HOH 226 A HOH 227 2 HOH HOH 227 A HOH 228 2 HOH HOH 228 A HOH 229 2 HOH HOH 229 A HOH 230 2 HOH HOH 230 A HOH 301 2 HOH HOH 301 A HOH 302 2 HOH HOH 302 A HOH 304 2 HOH HOH 304 A HOH 305 2 HOH HOH 305 A HOH 306 2 HOH HOH 306 A HOH 307 2 HOH HOH 307 A HOH 309 2 HOH HOH 309 A HOH 313 2 HOH HOH 313 A HOH 314 2 HOH HOH 314 A HOH 315 2 HOH HOH 315 A HOH 316 2 HOH HOH 316 A HOH 317 2 HOH HOH 317 A HOH 318 2 HOH HOH 318 A HOH 319 2 HOH HOH 319 A HOH 320 2 HOH HOH 320 A HOH 321 2 HOH HOH 321 A HOH 323 2 HOH HOH 323 A HOH 324 2 HOH HOH 324 A HOH 325 2 HOH HOH 325 A HOH 326 2 HOH HOH 326 A HOH 328 2 HOH HOH 328 A HOH 330 2 HOH HOH 330 A HOH 331 2 HOH HOH 331 A HOH 333 2 HOH HOH 333 A HOH 334 2 HOH HOH 334 A HOH 335 2 HOH HOH 335 A HOH 336 2 HOH HOH 336 A HOH 337 2 HOH HOH 337 A HOH 338 2 HOH HOH 338 A HOH 339 2 HOH HOH 339 A HOH 341 2 HOH HOH 341 A HOH 343 2 HOH HOH 343 A HOH 344 2 HOH HOH 344 A HOH 346 2 HOH HOH 346 A HOH 347 2 HOH HOH 347 A HOH 349 2 HOH HOH 349 A HOH 350 2 HOH HOH 350 A HOH 352 2 HOH HOH 352 A HOH 353 2 HOH HOH 353 A HOH 354 2 HOH HOH 354 A HOH 355 2 HOH HOH 355 A HOH 356 2 HOH HOH 356 A HOH 360 2 HOH HOH 360 A HOH 361 2 HOH HOH 361 A HOH 364 2 HOH HOH 364 A HOH 365 2 HOH HOH 365 A HOH 366 2 HOH HOH 366 A HOH 367 2 HOH HOH 367 A HOH 368 2 HOH HOH 368 A HOH 372 2 HOH HOH 372 A HOH 374 2 HOH HOH 374 A HOH 376 2 HOH HOH 376 A HOH 379 2 HOH HOH 379 A HOH 380 2 HOH HOH 380 A HOH 382 2 HOH HOH 382 A HOH 383 2 HOH HOH 383 A HOH 386 2 HOH HOH 386 A HOH 387 2 HOH HOH 387 A HOH 388 2 HOH HOH 388 A HOH 389 2 HOH HOH 389 A HOH 390 2 HOH HOH 390 A HOH 391 2 HOH HOH 391 A HOH 393 2 HOH HOH 393 A HOH 394 2 HOH HOH 394 A HOH 395 2 HOH HOH 395 A HOH 396 2 HOH HOH 396 A HOH 397 2 HOH HOH 397 A HOH 401 2 HOH HOH 401 A HOH 403 2 HOH HOH 403 A HOH 404 2 HOH HOH 404 A HOH 407 2 HOH HOH 407 A HOH 408 2 HOH HOH 408 A HOH 415 2 HOH HOH 415 A HOH 416 2 HOH HOH 416 A HOH 417 2 HOH HOH 417 A HOH 418 2 HOH HOH 418 A HOH 420 2 HOH HOH 420 A HOH 422 2 HOH HOH 422 A HOH 423 2 HOH HOH 423 A HOH 424 2 HOH HOH 424 A HOH 425 2 HOH HOH 425 A HOH 429 2 HOH HOH 429 A HOH 430 2 HOH HOH 430 A HOH 431 2 HOH HOH 431 A HOH 432 2 HOH HOH 432 A HOH 433 2 HOH HOH 433 A HOH 434 2 HOH HOH 434 A HOH 435 2 HOH HOH 435 A HOH 436 2 HOH HOH 436 A HOH 437 2 HOH HOH 437 A n 1 -17 A n 2 -16 A n 3 -15 A n 4 -14 A n 5 -13 A n 6 -12 A n 7 -11 A n 8 -10 A n 9 -9 A n 10 -8 A n 11 -7 A n 12 -6 A n 13 -5 A n 14 -4 A n 15 -3 A n 16 -2 A n 17 -1 A n 18 0 A LYS 1 n 19 LYS 1 A VAL 2 n 20 VAL 2 A PHE 3 n 21 PHE 3 A GLY 4 n 22 GLY 4 A ARG 5 n 23 ARG 5 A CYS 6 n 24 CYS 6 A GLU 7 n 25 GLU 7 A LEU 8 n 26 LEU 8 A ALA 9 n 27 ALA 9 A ALA 10 n 28 ALA 10 A ALA 11 n 29 ALA 11 A MET 12 n 30 MET 12 A LYS 13 n 31 LYS 13 A ARG 14 n 32 ARG 14 A HIS 15 n 33 HIS 15 A GLY 16 n 34 GLY 16 A LEU 17 n 35 LEU 17 A ASP 18 n 36 ASP 18 A ASN 19 n 37 ASN 19 A TYR 20 n 38 TYR 20 A ARG 21 n 39 ARG 21 A GLY 22 n 40 GLY 22 A TYR 23 n 41 TYR 23 A SER 24 n 42 SER 24 A LEU 25 n 43 LEU 25 A GLY 26 n 44 GLY 26 A ASN 27 n 45 ASN 27 A TRP 28 n 46 TRP 28 A VAL 29 n 47 VAL 29 A CYS 30 n 48 CYS 30 A ALA 31 n 49 ALA 31 A ALA 32 n 50 ALA 32 A LYS 33 n 51 LYS 33 A PHE 34 n 52 PHE 34 A GLU 35 n 53 GLU 35 A SER 36 n 54 SER 36 A ASN 37 n 55 ASN 37 A PHE 38 n 56 PHE 38 A ASN 39 n 57 ASN 39 A THR 40 n 58 THR 40 A GLN 41 n 59 GLN 41 A ALA 42 n 60 ALA 42 A THR 43 n 61 THR 43 A ASN 44 n 62 ASN 44 A ARG 45 n 63 ARG 45 A ASN 46 n 64 ASN 46 A THR 47 n 65 THR 47 A ASP 48 n 66 ASP 48 A GLY 49 n 67 GLY 49 A SER 50 n 68 SER 50 A THR 51 n 69 THR 51 A SER 52 n 70 SER 52 A TYR 53 n 71 TYR 53 A GLY 54 n 72 GLY 54 A ILE 55 n 73 ILE 55 A LEU 56 n 74 LEU 56 A GLN 57 n 75 GLN 57 A ILE 58 n 76 ILE 58 A ASN 59 n 77 ASN 59 A SER 60 n 78 SER 60 A ARG 61 n 79 ARG 61 A TRP 62 n 80 TRP 62 A TRP 63 n 81 TRP 63 A CYS 64 n 82 CYS 64 A ASN 65 n 83 ASN 65 A ASP 66 n 84 ASP 66 A GLY 67 n 85 GLY 67 A ARG 68 n 86 ARG 68 A THR 69 n 87 THR 69 A PRO 70 n 88 PRO 70 A GLY 71 n 89 GLY 71 A SER 72 n 90 SER 72 A ARG 73 n 91 ARG 73 A ASN 74 n 92 ASN 74 A LEU 75 n 93 LEU 75 A CYS 76 n 94 CYS 76 A ASN 77 n 95 ASN 77 A ILE 78 n 96 ILE 78 A PRO 79 n 97 PRO 79 A CYS 80 n 98 CYS 80 A SER 81 n 99 SER 81 A ALA 82 n 100 ALA 82 A LEU 83 n 101 LEU 83 A LEU 84 n 102 LEU 84 A SER 85 n 103 SER 85 A SER 86 n 104 SER 86 A ASP 87 n 105 ASP 87 A ILE 88 n 106 ILE 88 A THR 89 n 107 THR 89 A ALA 90 n 108 ALA 90 A SER 91 n 109 SER 91 A VAL 92 n 110 VAL 92 A ASN 93 n 111 ASN 93 A CYS 94 n 112 CYS 94 A ALA 95 n 113 ALA 95 A LYS 96 n 114 LYS 96 A LYS 97 n 115 LYS 97 A ILE 98 n 116 ILE 98 A VAL 99 n 117 VAL 99 A SER 100 n 118 SER 100 A ASP 101 n 119 ASP 101 A GLY 102 n 120 GLY 102 A ASN 103 n 121 ASN 103 A GLY 104 n 122 GLY 104 A MET 105 n 123 MET 105 A ASN 106 n 124 ASN 106 A ALA 107 n 125 ALA 107 A TRP 108 n 126 TRP 108 A VAL 109 n 127 VAL 109 A ALA 110 n 128 ALA 110 A TRP 111 n 129 TRP 111 A ARG 112 n 130 ARG 112 A ASN 113 n 131 ASN 113 A ARG 114 n 132 ARG 114 A CYS 115 n 133 CYS 115 A LYS 116 n 134 LYS 116 A GLY 117 n 135 GLY 117 A THR 118 n 136 THR 118 A ASP 119 n 137 ASP 119 A VAL 120 n 138 VAL 120 A GLN 121 n 139 GLN 121 A ALA 122 n 140 ALA 122 A TRP 123 n 141 TRP 123 A ILE 124 n 142 ILE 124 A ARG 125 n 143 ARG 125 A GLY 126 n 144 GLY 126 A CYS 127 n 145 CYS 127 A ARG 128 n 146 ARG 128 A LEU 129 n 147 LEU 129 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ASN 44 A O ASN 62 A N SER 52 A N SER 70 A N TYR 53 A N TYR 71 A O ILE 58 A O ILE 76 1 A MET -17 A MET 1 1 Y 1 A ARG -16 A ARG 2 1 Y 1 A SER -15 A SER 3 1 Y 1 A LEU -14 A LEU 4 1 Y 1 A LEU -13 A LEU 5 1 Y 1 A ILE -12 A ILE 6 1 Y 1 A LEU -11 A LEU 7 1 Y 1 A VAL -10 A VAL 8 1 Y 1 A LEU -9 A LEU 9 1 Y 1 A CYS -8 A CYS 10 1 Y 1 A PHE -7 A PHE 11 1 Y 1 A LEU -6 A LEU 12 1 Y 1 A PRO -5 A PRO 13 1 Y 1 A LEU -4 A LEU 14 1 Y 1 A ALA -3 A ALA 15 1 Y 1 A ALA -2 A ALA 16 1 Y 1 A LEU -1 A LEU 17 1 Y 1 A GLY 0 A GLY 18 1 Y 1 -4.05 0.60 121.00 116.95 A A A CB CG CD2 TYR TYR TYR 20 20 20 N 1 6.16 0.80 106.30 112.46 A A A CD1 CG CD2 TRP TRP TRP 28 28 28 N 1 -6.04 1.00 110.10 104.06 A A A CG CD1 NE1 TRP TRP TRP 28 28 28 N 1 -5.20 0.80 107.30 102.10 A A A CE2 CD2 CG TRP TRP TRP 28 28 28 N 1 -3.74 0.50 120.30 116.56 A A A NE CZ NH2 ARG ARG ARG 61 61 61 N 1 7.22 0.80 106.30 113.52 A A A CD1 CG CD2 TRP TRP TRP 62 62 62 N 1 -6.26 0.80 107.30 101.04 A A A CE2 CD2 CG TRP TRP TRP 62 62 62 N 1 6.90 0.80 106.30 113.20 A A A CD1 CG CD2 TRP TRP TRP 63 63 63 N 1 -8.20 1.30 127.00 118.80 A A A CB CG CD1 TRP TRP TRP 63 63 63 N 1 -6.26 0.80 107.30 101.04 A A A CE2 CD2 CG TRP TRP TRP 63 63 63 N 1 5.45 0.90 133.90 139.35 A A A CG CD2 CE3 TRP TRP TRP 63 63 63 N 1 6.64 0.80 106.30 112.94 A A A CD1 CG CD2 TRP TRP TRP 108 108 108 N 1 -8.69 1.30 127.00 118.31 A A A CB CG CD1 TRP TRP TRP 108 108 108 N 1 -6.47 0.80 107.30 100.83 A A A CE2 CD2 CG TRP TRP TRP 108 108 108 N 1 5.45 0.90 133.90 139.35 A A A CG CD2 CE3 TRP TRP TRP 108 108 108 N 1 4.94 0.80 106.30 111.24 A A A CD1 CG CD2 TRP TRP TRP 111 111 111 N 1 -5.63 0.80 107.30 101.67 A A A CE2 CD2 CG TRP TRP TRP 111 111 111 N 1 -3.03 0.50 120.30 117.27 A A A NE CZ NH2 ARG ARG ARG 114 114 114 N 1 6.62 0.80 106.30 112.92 A A A CD1 CG CD2 TRP TRP TRP 123 123 123 N 1 -5.75 0.80 107.30 101.55 A A A CE2 CD2 CG TRP TRP TRP 123 123 123 N 1 A ASP 48 -66.67 0.54 1 A ASN 74 36.43 52.33 20. 0.173 0.173 1.9 8.0 9095 1 0. 1.9 8.0 139 1141 0 0 1002 0.01 2.9 24.5 1.2 2. 8.0 1LSY 9294 1 93. model building X-PLOR refinement X-PLOR phasing X-PLOR LYSOZYME (E.C.3.2.1.17) MUTANT WITH ASP 52 REPLACED BY SER (D52S) CRYSTAL STRUCTURE OF THE MUTANT D52S HEN EGG WHITE LYSOZYME WITH AN OLIGOSACCHARIDE PRODUCT 1 N N 2 N N A GLY 4 A GLY 22 HELX_P A HIS 15 A HIS 33 1 1 12 A SER 24 A SER 42 HELX_P A ASN 37 A ASN 55 1 2 14 A CYS 80 A CYS 98 HELX_P A SER 85 A SER 103 5 3 6 A ILE 88 A ILE 106 HELX_P A SER 100 A SER 118 1 4 13 A ASN 103 A ASN 121 HELX_P A ALA 107 A ALA 125 5 5 5 A TRP 108 A TRP 126 HELX_P A CYS 115 A CYS 133 1 6 8 A ASP 119 A ASP 137 HELX_P A ILE 124 A ILE 142 5 7 6 disulf 2.007 A CYS 6 A SG CYS 24 1_555 A CYS 127 A SG CYS 145 1_555 disulf 2.011 A CYS 30 A SG CYS 48 1_555 A CYS 115 A SG CYS 133 1_555 disulf 2.034 A CYS 64 A SG CYS 82 1_555 A CYS 80 A SG CYS 98 1_555 disulf 2.003 A CYS 76 A SG CYS 94 1_555 A CYS 94 A SG CYS 112 1_555 HYDROLASE(O-GLYCOSYL) HYDROLASE(O-GLYCOSYL) LYSC_CHICK UNP 1 1 P00698 MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL 1 147 1LSY -17 129 P00698 A 1 1 147 1 ASP CONFLICT SER 52 1LSY A P00698 UNP 70 70 3 anti-parallel anti-parallel A THR 43 A THR 61 A ARG 45 A ARG 63 A THR 51 A THR 69 A TYR 53 A TYR 71 A ILE 58 A ILE 76 A ASN 59 A ASN 77 96 P 43 21 2