0.012610
0.000000
0.000000
0.000000
0.012610
0.000000
0.000000
0.000000
0.026596
0.00000
0.00000
0.00000
TWO ALTERNATIVE CONFORMATIONS MODELLED FOR RESIDUE VAL 109.
Johnson, L.N.
Hadfield, A.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
79.300
79.300
37.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
243
856
872
10.1006/jmbi.1994.1688
7966306
Crystal structure of the mutant D52S hen egg white lysozyme with an oligosaccharide product.
1994
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
16229.650
HEN EGG WHITE LYSOZYME
3.2.1.17
1
man
polymer
18.015
water
139
nat
water
no
no
MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTSYGILQINSRW
WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTSYGILQINSRW
WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
chicken
Gallus
sample
9031
EGG
Gallus gallus
1.82
32.45
repository
Initial release
Version format compliance
Version format compliance
1
0
1995-01-26
1
1
2008-03-24
1
2
2011-07-13
Y
1994-09-27
REL
HOH
water
HOH
130
2
HOH
HOH
130
A
HOH
131
2
HOH
HOH
131
A
HOH
132
2
HOH
HOH
132
A
HOH
133
2
HOH
HOH
133
A
HOH
136
2
HOH
HOH
136
A
HOH
137
2
HOH
HOH
137
A
HOH
138
2
HOH
HOH
138
A
HOH
139
2
HOH
HOH
139
A
HOH
141
2
HOH
HOH
141
A
HOH
142
2
HOH
HOH
142
A
HOH
143
2
HOH
HOH
143
A
HOH
144
2
HOH
HOH
144
A
HOH
145
2
HOH
HOH
145
A
HOH
147
2
HOH
HOH
147
A
HOH
148
2
HOH
HOH
148
A
HOH
150
2
HOH
HOH
150
A
HOH
152
2
HOH
HOH
152
A
HOH
156
2
HOH
HOH
156
A
HOH
160
2
HOH
HOH
160
A
HOH
162
2
HOH
HOH
162
A
HOH
167
2
HOH
HOH
167
A
HOH
180
2
HOH
HOH
180
A
HOH
195
2
HOH
HOH
195
A
HOH
200
2
HOH
HOH
200
A
HOH
201
2
HOH
HOH
201
A
HOH
202
2
HOH
HOH
202
A
HOH
203
2
HOH
HOH
203
A
HOH
205
2
HOH
HOH
205
A
HOH
206
2
HOH
HOH
206
A
HOH
207
2
HOH
HOH
207
A
HOH
209
2
HOH
HOH
209
A
HOH
210
2
HOH
HOH
210
A
HOH
211
2
HOH
HOH
211
A
HOH
212
2
HOH
HOH
212
A
HOH
213
2
HOH
HOH
213
A
HOH
214
2
HOH
HOH
214
A
HOH
216
2
HOH
HOH
216
A
HOH
217
2
HOH
HOH
217
A
HOH
218
2
HOH
HOH
218
A
HOH
219
2
HOH
HOH
219
A
HOH
221
2
HOH
HOH
221
A
HOH
222
2
HOH
HOH
222
A
HOH
223
2
HOH
HOH
223
A
HOH
224
2
HOH
HOH
224
A
HOH
226
2
HOH
HOH
226
A
HOH
227
2
HOH
HOH
227
A
HOH
228
2
HOH
HOH
228
A
HOH
229
2
HOH
HOH
229
A
HOH
230
2
HOH
HOH
230
A
HOH
301
2
HOH
HOH
301
A
HOH
302
2
HOH
HOH
302
A
HOH
304
2
HOH
HOH
304
A
HOH
305
2
HOH
HOH
305
A
HOH
306
2
HOH
HOH
306
A
HOH
307
2
HOH
HOH
307
A
HOH
309
2
HOH
HOH
309
A
HOH
313
2
HOH
HOH
313
A
HOH
314
2
HOH
HOH
314
A
HOH
315
2
HOH
HOH
315
A
HOH
316
2
HOH
HOH
316
A
HOH
317
2
HOH
HOH
317
A
HOH
318
2
HOH
HOH
318
A
HOH
319
2
HOH
HOH
319
A
HOH
320
2
HOH
HOH
320
A
HOH
321
2
HOH
HOH
321
A
HOH
323
2
HOH
HOH
323
A
HOH
324
2
HOH
HOH
324
A
HOH
325
2
HOH
HOH
325
A
HOH
326
2
HOH
HOH
326
A
HOH
328
2
HOH
HOH
328
A
HOH
330
2
HOH
HOH
330
A
HOH
331
2
HOH
HOH
331
A
HOH
333
2
HOH
HOH
333
A
HOH
334
2
HOH
HOH
334
A
HOH
335
2
HOH
HOH
335
A
HOH
336
2
HOH
HOH
336
A
HOH
337
2
HOH
HOH
337
A
HOH
338
2
HOH
HOH
338
A
HOH
339
2
HOH
HOH
339
A
HOH
341
2
HOH
HOH
341
A
HOH
343
2
HOH
HOH
343
A
HOH
344
2
HOH
HOH
344
A
HOH
346
2
HOH
HOH
346
A
HOH
347
2
HOH
HOH
347
A
HOH
349
2
HOH
HOH
349
A
HOH
350
2
HOH
HOH
350
A
HOH
352
2
HOH
HOH
352
A
HOH
353
2
HOH
HOH
353
A
HOH
354
2
HOH
HOH
354
A
HOH
355
2
HOH
HOH
355
A
HOH
356
2
HOH
HOH
356
A
HOH
360
2
HOH
HOH
360
A
HOH
361
2
HOH
HOH
361
A
HOH
364
2
HOH
HOH
364
A
HOH
365
2
HOH
HOH
365
A
HOH
366
2
HOH
HOH
366
A
HOH
367
2
HOH
HOH
367
A
HOH
368
2
HOH
HOH
368
A
HOH
372
2
HOH
HOH
372
A
HOH
374
2
HOH
HOH
374
A
HOH
376
2
HOH
HOH
376
A
HOH
379
2
HOH
HOH
379
A
HOH
380
2
HOH
HOH
380
A
HOH
382
2
HOH
HOH
382
A
HOH
383
2
HOH
HOH
383
A
HOH
386
2
HOH
HOH
386
A
HOH
387
2
HOH
HOH
387
A
HOH
388
2
HOH
HOH
388
A
HOH
389
2
HOH
HOH
389
A
HOH
390
2
HOH
HOH
390
A
HOH
391
2
HOH
HOH
391
A
HOH
393
2
HOH
HOH
393
A
HOH
394
2
HOH
HOH
394
A
HOH
395
2
HOH
HOH
395
A
HOH
396
2
HOH
HOH
396
A
HOH
397
2
HOH
HOH
397
A
HOH
401
2
HOH
HOH
401
A
HOH
403
2
HOH
HOH
403
A
HOH
404
2
HOH
HOH
404
A
HOH
407
2
HOH
HOH
407
A
HOH
408
2
HOH
HOH
408
A
HOH
415
2
HOH
HOH
415
A
HOH
416
2
HOH
HOH
416
A
HOH
417
2
HOH
HOH
417
A
HOH
418
2
HOH
HOH
418
A
HOH
420
2
HOH
HOH
420
A
HOH
422
2
HOH
HOH
422
A
HOH
423
2
HOH
HOH
423
A
HOH
424
2
HOH
HOH
424
A
HOH
425
2
HOH
HOH
425
A
HOH
429
2
HOH
HOH
429
A
HOH
430
2
HOH
HOH
430
A
HOH
431
2
HOH
HOH
431
A
HOH
432
2
HOH
HOH
432
A
HOH
433
2
HOH
HOH
433
A
HOH
434
2
HOH
HOH
434
A
HOH
435
2
HOH
HOH
435
A
HOH
436
2
HOH
HOH
436
A
HOH
437
2
HOH
HOH
437
A
n
1
-17
A
n
2
-16
A
n
3
-15
A
n
4
-14
A
n
5
-13
A
n
6
-12
A
n
7
-11
A
n
8
-10
A
n
9
-9
A
n
10
-8
A
n
11
-7
A
n
12
-6
A
n
13
-5
A
n
14
-4
A
n
15
-3
A
n
16
-2
A
n
17
-1
A
n
18
0
A
LYS
1
n
19
LYS
1
A
VAL
2
n
20
VAL
2
A
PHE
3
n
21
PHE
3
A
GLY
4
n
22
GLY
4
A
ARG
5
n
23
ARG
5
A
CYS
6
n
24
CYS
6
A
GLU
7
n
25
GLU
7
A
LEU
8
n
26
LEU
8
A
ALA
9
n
27
ALA
9
A
ALA
10
n
28
ALA
10
A
ALA
11
n
29
ALA
11
A
MET
12
n
30
MET
12
A
LYS
13
n
31
LYS
13
A
ARG
14
n
32
ARG
14
A
HIS
15
n
33
HIS
15
A
GLY
16
n
34
GLY
16
A
LEU
17
n
35
LEU
17
A
ASP
18
n
36
ASP
18
A
ASN
19
n
37
ASN
19
A
TYR
20
n
38
TYR
20
A
ARG
21
n
39
ARG
21
A
GLY
22
n
40
GLY
22
A
TYR
23
n
41
TYR
23
A
SER
24
n
42
SER
24
A
LEU
25
n
43
LEU
25
A
GLY
26
n
44
GLY
26
A
ASN
27
n
45
ASN
27
A
TRP
28
n
46
TRP
28
A
VAL
29
n
47
VAL
29
A
CYS
30
n
48
CYS
30
A
ALA
31
n
49
ALA
31
A
ALA
32
n
50
ALA
32
A
LYS
33
n
51
LYS
33
A
PHE
34
n
52
PHE
34
A
GLU
35
n
53
GLU
35
A
SER
36
n
54
SER
36
A
ASN
37
n
55
ASN
37
A
PHE
38
n
56
PHE
38
A
ASN
39
n
57
ASN
39
A
THR
40
n
58
THR
40
A
GLN
41
n
59
GLN
41
A
ALA
42
n
60
ALA
42
A
THR
43
n
61
THR
43
A
ASN
44
n
62
ASN
44
A
ARG
45
n
63
ARG
45
A
ASN
46
n
64
ASN
46
A
THR
47
n
65
THR
47
A
ASP
48
n
66
ASP
48
A
GLY
49
n
67
GLY
49
A
SER
50
n
68
SER
50
A
THR
51
n
69
THR
51
A
SER
52
n
70
SER
52
A
TYR
53
n
71
TYR
53
A
GLY
54
n
72
GLY
54
A
ILE
55
n
73
ILE
55
A
LEU
56
n
74
LEU
56
A
GLN
57
n
75
GLN
57
A
ILE
58
n
76
ILE
58
A
ASN
59
n
77
ASN
59
A
SER
60
n
78
SER
60
A
ARG
61
n
79
ARG
61
A
TRP
62
n
80
TRP
62
A
TRP
63
n
81
TRP
63
A
CYS
64
n
82
CYS
64
A
ASN
65
n
83
ASN
65
A
ASP
66
n
84
ASP
66
A
GLY
67
n
85
GLY
67
A
ARG
68
n
86
ARG
68
A
THR
69
n
87
THR
69
A
PRO
70
n
88
PRO
70
A
GLY
71
n
89
GLY
71
A
SER
72
n
90
SER
72
A
ARG
73
n
91
ARG
73
A
ASN
74
n
92
ASN
74
A
LEU
75
n
93
LEU
75
A
CYS
76
n
94
CYS
76
A
ASN
77
n
95
ASN
77
A
ILE
78
n
96
ILE
78
A
PRO
79
n
97
PRO
79
A
CYS
80
n
98
CYS
80
A
SER
81
n
99
SER
81
A
ALA
82
n
100
ALA
82
A
LEU
83
n
101
LEU
83
A
LEU
84
n
102
LEU
84
A
SER
85
n
103
SER
85
A
SER
86
n
104
SER
86
A
ASP
87
n
105
ASP
87
A
ILE
88
n
106
ILE
88
A
THR
89
n
107
THR
89
A
ALA
90
n
108
ALA
90
A
SER
91
n
109
SER
91
A
VAL
92
n
110
VAL
92
A
ASN
93
n
111
ASN
93
A
CYS
94
n
112
CYS
94
A
ALA
95
n
113
ALA
95
A
LYS
96
n
114
LYS
96
A
LYS
97
n
115
LYS
97
A
ILE
98
n
116
ILE
98
A
VAL
99
n
117
VAL
99
A
SER
100
n
118
SER
100
A
ASP
101
n
119
ASP
101
A
GLY
102
n
120
GLY
102
A
ASN
103
n
121
ASN
103
A
GLY
104
n
122
GLY
104
A
MET
105
n
123
MET
105
A
ASN
106
n
124
ASN
106
A
ALA
107
n
125
ALA
107
A
TRP
108
n
126
TRP
108
A
VAL
109
n
127
VAL
109
A
ALA
110
n
128
ALA
110
A
TRP
111
n
129
TRP
111
A
ARG
112
n
130
ARG
112
A
ASN
113
n
131
ASN
113
A
ARG
114
n
132
ARG
114
A
CYS
115
n
133
CYS
115
A
LYS
116
n
134
LYS
116
A
GLY
117
n
135
GLY
117
A
THR
118
n
136
THR
118
A
ASP
119
n
137
ASP
119
A
VAL
120
n
138
VAL
120
A
GLN
121
n
139
GLN
121
A
ALA
122
n
140
ALA
122
A
TRP
123
n
141
TRP
123
A
ILE
124
n
142
ILE
124
A
ARG
125
n
143
ARG
125
A
GLY
126
n
144
GLY
126
A
CYS
127
n
145
CYS
127
A
ARG
128
n
146
ARG
128
A
LEU
129
n
147
LEU
129
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
44
A
O
ASN
62
A
N
SER
52
A
N
SER
70
A
N
TYR
53
A
N
TYR
71
A
O
ILE
58
A
O
ILE
76
1
A
MET
-17
A
MET
1
1
Y
1
A
ARG
-16
A
ARG
2
1
Y
1
A
SER
-15
A
SER
3
1
Y
1
A
LEU
-14
A
LEU
4
1
Y
1
A
LEU
-13
A
LEU
5
1
Y
1
A
ILE
-12
A
ILE
6
1
Y
1
A
LEU
-11
A
LEU
7
1
Y
1
A
VAL
-10
A
VAL
8
1
Y
1
A
LEU
-9
A
LEU
9
1
Y
1
A
CYS
-8
A
CYS
10
1
Y
1
A
PHE
-7
A
PHE
11
1
Y
1
A
LEU
-6
A
LEU
12
1
Y
1
A
PRO
-5
A
PRO
13
1
Y
1
A
LEU
-4
A
LEU
14
1
Y
1
A
ALA
-3
A
ALA
15
1
Y
1
A
ALA
-2
A
ALA
16
1
Y
1
A
LEU
-1
A
LEU
17
1
Y
1
A
GLY
0
A
GLY
18
1
Y
1
-4.05
0.60
121.00
116.95
A
A
A
CB
CG
CD2
TYR
TYR
TYR
20
20
20
N
1
6.16
0.80
106.30
112.46
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
28
28
28
N
1
-6.04
1.00
110.10
104.06
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
28
28
28
N
1
-5.20
0.80
107.30
102.10
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
28
28
28
N
1
-3.74
0.50
120.30
116.56
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
61
61
61
N
1
7.22
0.80
106.30
113.52
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
62
62
62
N
1
-6.26
0.80
107.30
101.04
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
62
62
62
N
1
6.90
0.80
106.30
113.20
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
63
63
63
N
1
-8.20
1.30
127.00
118.80
A
A
A
CB
CG
CD1
TRP
TRP
TRP
63
63
63
N
1
-6.26
0.80
107.30
101.04
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
63
63
63
N
1
5.45
0.90
133.90
139.35
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
63
63
63
N
1
6.64
0.80
106.30
112.94
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
108
108
108
N
1
-8.69
1.30
127.00
118.31
A
A
A
CB
CG
CD1
TRP
TRP
TRP
108
108
108
N
1
-6.47
0.80
107.30
100.83
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
108
108
108
N
1
5.45
0.90
133.90
139.35
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
108
108
108
N
1
4.94
0.80
106.30
111.24
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
111
111
111
N
1
-5.63
0.80
107.30
101.67
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
111
111
111
N
1
-3.03
0.50
120.30
117.27
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
114
114
114
N
1
6.62
0.80
106.30
112.92
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
123
123
123
N
1
-5.75
0.80
107.30
101.55
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
123
123
123
N
1
A
ASP
48
-66.67
0.54
1
A
ASN
74
36.43
52.33
20.
0.173
0.173
1.9
8.0
9095
1
0.
1.9
8.0
139
1141
0
0
1002
0.01
2.9
24.5
1.2
2.
8.0
1LSY
9294
1
93.
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
LYSOZYME (E.C.3.2.1.17) MUTANT WITH ASP 52 REPLACED BY SER (D52S)
CRYSTAL STRUCTURE OF THE MUTANT D52S HEN EGG WHITE LYSOZYME WITH AN OLIGOSACCHARIDE PRODUCT
1
N
N
2
N
N
A
GLY
4
A
GLY
22
HELX_P
A
HIS
15
A
HIS
33
1
1
12
A
SER
24
A
SER
42
HELX_P
A
ASN
37
A
ASN
55
1
2
14
A
CYS
80
A
CYS
98
HELX_P
A
SER
85
A
SER
103
5
3
6
A
ILE
88
A
ILE
106
HELX_P
A
SER
100
A
SER
118
1
4
13
A
ASN
103
A
ASN
121
HELX_P
A
ALA
107
A
ALA
125
5
5
5
A
TRP
108
A
TRP
126
HELX_P
A
CYS
115
A
CYS
133
1
6
8
A
ASP
119
A
ASP
137
HELX_P
A
ILE
124
A
ILE
142
5
7
6
disulf
2.007
A
CYS
6
A
SG
CYS
24
1_555
A
CYS
127
A
SG
CYS
145
1_555
disulf
2.011
A
CYS
30
A
SG
CYS
48
1_555
A
CYS
115
A
SG
CYS
133
1_555
disulf
2.034
A
CYS
64
A
SG
CYS
82
1_555
A
CYS
80
A
SG
CYS
98
1_555
disulf
2.003
A
CYS
76
A
SG
CYS
94
1_555
A
CYS
94
A
SG
CYS
112
1_555
HYDROLASE(O-GLYCOSYL)
HYDROLASE(O-GLYCOSYL)
LYSC_CHICK
UNP
1
1
P00698
MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW
WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
1
147
1LSY
-17
129
P00698
A
1
1
147
1
ASP
CONFLICT
SER
52
1LSY
A
P00698
UNP
70
70
3
anti-parallel
anti-parallel
A
THR
43
A
THR
61
A
ARG
45
A
ARG
63
A
THR
51
A
THR
69
A
TYR
53
A
TYR
71
A
ILE
58
A
ILE
76
A
ASN
59
A
ASN
77
96
P 43 21 2