0.012650
0.000000
0.000000
0.000000
0.012650
0.000000
0.000000
0.000000
0.003845
0.00000
0.00000
0.00000
Hamelryck, T.W.
Loris, R.
Bouckaert, J.
Strecker, G.
Imberty, A.
Fernandez, E.
Wyns, L.
Etzler, M.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
79.050
79.050
260.110
C8 H15 N O6
221.208
2-acetamido-2-deoxy-alpha-D-galactopyranose
N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
D-saccharide, alpha linking
C5 H5 N5
135.127
ADENINE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-galactopyranose
N-acetyl-beta-D-galactosamine; 2-acetamido-2-deoxy-beta-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-D-GALACTOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
286
1161
1177
10.1006/jmbi.1998.2534
10047489
Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
1999
10.2210/pdb1lu1/pdb
pdb_00001lu1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1998-02
MARRESEARCH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
DOLICHOS BIFLORUS SEED LECTIN
27115.078
LECTIN
1
man
polymer
424.401
2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
1
man
branched
40.078
CALCIUM ION
1
syn
non-polymer
54.938
MANGANESE (II) ION
1
syn
non-polymer
135.127
ADENINE
1
syn
non-polymer
DBL
Forssman antigen fragment
no
no
ANIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKSTGAVASWATSFTVKISAPSK
ASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFDTLSNSGWDPSMKHIGIDVNSIKSIATVSWDLANGE
NAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFASKLPDDSTAE
PLDLASYLVRNVL
ANIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKSTGAVASWATSFTVKISAPSK
ASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFDTLSNSGWDPSMKHIGIDVNSIKSIATVSWDLANGE
NAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFASKLPDDSTAE
PLDLASYLVRNVL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
horse gram
Vigna
Vigna unguiculata
subsp. cylindrica
Escherichia
sample
3840
SEED
Vigna unguiculata subsp. cylindrica
562
Escherichia coli
1
3.1
60
7.5
100 MM HEPES PH 7.5 0.2 M MGCL2 30% (W/V) PEG 400
atom_site
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_asym
struct_conn
struct_conn_type
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Advisory
Atomic model
Data collection
Database references
Derived calculations
Structure summary
Database references
Refinement description
Structure summary
1
0
1998-12-09
1
1
2008-03-24
1
2
2011-07-13
2
0
2020-07-29
2
1
2023-08-09
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
NGA
2
n
B
NGA
1
NGA
1
n
B
A2G
2
DGalpNAca
N-acetyl-a-D-galactopyranosamine
a-D-GalpNAc
GalNAc
DGalpNAcb
N-acetyl-b-D-galactopyranosamine
b-D-GalpNAc
GalNAc
Y
BNL
1998-07-24
REL
REL
oligosaccharide
DGalpNAca1-3DGalpNAcb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[a2112h-1b_1-5_2*NCC/3=O][a2112h-1a_1-5_2*NCC/3=O]/1-2/a3-b1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-FucpNAc]{[(3+1)][a-D-GalpNAc]{}}
2
PDB-CARE
LINUCS
C1
O3
A2G
NGA
2
1
2
O1
HO3
sing
n
n
CA
CALCIUM ION
MN
MANGANESE (II) ION
ADE
ADENINE
1FAT
PDB
experimental model
Antigen
oligosaccharide
Forssman antigen fragment
Oligosaccharide
CA
301
3
CA
CA
301
A
MN
302
4
MN
MN
302
A
AD2
601
5
ADE
ADE
601
A
ALA
1
n
1
ALA
1
A
ASN
2
n
2
ASN
2
A
ILE
3
n
3
ILE
3
A
GLN
4
n
4
GLN
4
A
SER
5
n
5
SER
5
A
PHE
6
n
6
PHE
6
A
SER
7
n
7
SER
7
A
PHE
8
n
8
PHE
8
A
LYS
9
n
9
LYS
9
A
ASN
10
n
10
ASN
10
A
PHE
11
n
11
PHE
11
A
ASN
12
n
12
ASN
12
A
SER
13
n
13
SER
13
A
PRO
14
n
14
PRO
14
A
SER
15
n
15
SER
15
A
PHE
16
n
16
PHE
16
A
ILE
17
n
17
ILE
17
A
LEU
18
n
18
LEU
18
A
GLN
19
n
19
GLN
19
A
GLY
20
n
20
GLY
20
A
ASP
21
n
21
ASP
21
A
ALA
22
n
22
ALA
22
A
THR
23
n
23
THR
23
A
VAL
24
n
24
VAL
24
A
SER
25
n
25
SER
25
A
SER
26
n
26
SER
26
A
GLY
27
n
27
GLY
27
A
LYS
28
n
28
LYS
28
A
LEU
29
n
29
LEU
29
A
GLN
30
n
30
GLN
30
A
LEU
31
n
31
LEU
31
A
THR
32
n
32
THR
32
A
LYS
33
n
33
LYS
33
A
VAL
34
n
34
VAL
34
A
LYS
35
n
35
LYS
35
A
GLU
36
n
36
GLU
36
A
ASN
37
n
37
ASN
37
A
GLY
38
n
38
GLY
38
A
ILE
39
n
39
ILE
39
A
PRO
40
n
40
PRO
40
A
THR
41
n
41
THR
41
A
PRO
42
n
42
PRO
42
A
SER
43
n
43
SER
43
A
SER
44
n
44
SER
44
A
LEU
45
n
45
LEU
45
A
GLY
46
n
46
GLY
46
A
ARG
47
n
47
ARG
47
A
ALA
48
n
48
ALA
48
A
PHE
49
n
49
PHE
49
A
TYR
50
n
50
TYR
50
A
SER
51
n
51
SER
51
A
SER
52
n
52
SER
52
A
PRO
53
n
53
PRO
53
A
ILE
54
n
54
ILE
54
A
GLN
55
n
55
GLN
55
A
ILE
56
n
56
ILE
56
A
TYR
57
n
57
TYR
57
A
ASP
58
n
58
ASP
58
A
LYS
59
n
59
LYS
59
A
SER
60
n
60
SER
60
A
THR
61
n
61
THR
61
A
GLY
62
n
62
GLY
62
A
ALA
63
n
63
ALA
63
A
VAL
64
n
64
VAL
64
A
ALA
65
n
65
ALA
65
A
SER
66
n
66
SER
66
A
TRP
67
n
67
TRP
67
A
ALA
68
n
68
ALA
68
A
THR
69
n
69
THR
69
A
SER
70
n
70
SER
70
A
PHE
71
n
71
PHE
71
A
THR
72
n
72
THR
72
A
VAL
73
n
73
VAL
73
A
LYS
74
n
74
LYS
74
A
ILE
75
n
75
ILE
75
A
SER
76
n
76
SER
76
A
ALA
77
n
77
ALA
77
A
PRO
78
n
78
PRO
78
A
SER
79
n
79
SER
79
A
LYS
80
n
80
LYS
80
A
ALA
81
n
81
ALA
81
A
SER
82
n
82
SER
82
A
PHE
83
n
83
PHE
83
A
ALA
84
n
84
ALA
84
A
ASP
85
n
85
ASP
85
A
GLY
86
n
86
GLY
86
A
ILE
87
n
87
ILE
87
A
ALA
88
n
88
ALA
88
A
PHE
89
n
89
PHE
89
A
ALA
90
n
90
ALA
90
A
LEU
91
n
91
LEU
91
A
VAL
92
n
92
VAL
92
A
PRO
93
n
93
PRO
93
A
VAL
94
n
94
VAL
94
A
GLY
95
n
95
GLY
95
A
SER
96
n
96
SER
96
A
GLU
97
n
97
GLU
97
A
PRO
98
n
98
PRO
98
A
ARG
99
n
99
ARG
99
A
ARG
100
n
100
ARG
100
A
ASN
101
n
101
ASN
101
A
GLY
102
n
102
GLY
102
A
GLY
103
n
103
GLY
103
A
TYR
104
n
104
TYR
104
A
LEU
105
n
105
LEU
105
A
GLY
106
n
106
GLY
106
A
VAL
107
n
107
VAL
107
A
PHE
108
n
108
PHE
108
A
ASP
109
n
109
ASP
109
A
SER
110
n
110
SER
110
A
ASP
111
n
111
ASP
111
A
VAL
112
n
112
VAL
112
A
TYR
113
n
113
TYR
113
A
ASN
114
n
114
ASN
114
A
ASN
115
n
115
ASN
115
A
SER
116
n
116
SER
116
A
ALA
117
n
117
ALA
117
A
GLN
118
n
118
GLN
118
A
THR
119
n
119
THR
119
A
VAL
120
n
120
VAL
120
A
ALA
121
n
121
ALA
121
A
VAL
122
n
122
VAL
122
A
GLU
123
n
123
GLU
123
A
PHE
124
n
124
PHE
124
A
ASP
125
n
125
ASP
125
A
THR
126
n
126
THR
126
A
LEU
127
n
127
LEU
127
A
SER
128
n
128
SER
128
A
ASN
129
n
129
ASN
129
A
SER
130
n
130
SER
130
A
GLY
131
n
131
GLY
131
A
TRP
132
n
132
TRP
132
A
ASP
133
n
133
ASP
133
A
PRO
134
n
134
PRO
134
A
SER
135
n
135
SER
135
A
MET
136
n
136
MET
136
A
LYS
137
n
137
LYS
137
A
HIS
138
n
138
HIS
138
A
ILE
139
n
139
ILE
139
A
GLY
140
n
140
GLY
140
A
ILE
141
n
141
ILE
141
A
ASP
142
n
142
ASP
142
A
VAL
143
n
143
VAL
143
A
ASN
144
n
144
ASN
144
A
SER
145
n
145
SER
145
A
ILE
146
n
146
ILE
146
A
LYS
147
n
147
LYS
147
A
SER
148
n
148
SER
148
A
ILE
149
n
149
ILE
149
A
ALA
150
n
150
ALA
150
A
THR
151
n
151
THR
151
A
VAL
152
n
152
VAL
152
A
SER
153
n
153
SER
153
A
TRP
154
n
154
TRP
154
A
ASP
155
n
155
ASP
155
A
LEU
156
n
156
LEU
156
A
ALA
157
n
157
ALA
157
A
ASN
158
n
158
ASN
158
A
GLY
159
n
159
GLY
159
A
GLU
160
n
160
GLU
160
A
ASN
161
n
161
ASN
161
A
ALA
162
n
162
ALA
162
A
GLU
163
n
163
GLU
163
A
ILE
164
n
164
ILE
164
A
LEU
165
n
165
LEU
165
A
ILE
166
n
166
ILE
166
A
THR
167
n
167
THR
167
A
TYR
168
n
168
TYR
168
A
ASN
169
n
169
ASN
169
A
ALA
170
n
170
ALA
170
A
ALA
171
n
171
ALA
171
A
THR
172
n
172
THR
172
A
SER
173
n
173
SER
173
A
LEU
174
n
174
LEU
174
A
LEU
175
n
175
LEU
175
A
VAL
176
n
176
VAL
176
A
ALA
177
n
177
ALA
177
A
SER
178
n
178
SER
178
A
LEU
179
n
179
LEU
179
A
VAL
180
n
180
VAL
180
A
HIS
181
n
181
HIS
181
A
PRO
182
n
182
PRO
182
A
SER
183
n
183
SER
183
A
ARG
184
n
184
ARG
184
A
ARG
185
n
185
ARG
185
A
THR
186
n
186
THR
186
A
SER
187
n
187
SER
187
A
TYR
188
n
188
TYR
188
A
ILE
189
n
189
ILE
189
A
LEU
190
n
190
LEU
190
A
SER
191
n
191
SER
191
A
GLU
192
n
192
GLU
192
A
ARG
193
n
193
ARG
193
A
VAL
194
n
194
VAL
194
A
ASP
195
n
195
ASP
195
A
ILE
196
n
196
ILE
196
A
THR
197
n
197
THR
197
A
ASN
198
n
198
ASN
198
A
GLU
199
n
199
GLU
199
A
LEU
200
n
200
LEU
200
A
PRO
201
n
201
PRO
201
A
GLU
202
n
202
GLU
202
A
TYR
203
n
203
TYR
203
A
VAL
204
n
204
VAL
204
A
SER
205
n
205
SER
205
A
VAL
206
n
206
VAL
206
A
GLY
207
n
207
GLY
207
A
PHE
208
n
208
PHE
208
A
SER
209
n
209
SER
209
A
ALA
210
n
210
ALA
210
A
THR
211
n
211
THR
211
A
THR
212
n
212
THR
212
A
GLY
213
n
213
GLY
213
A
LEU
214
n
214
LEU
214
A
SER
215
n
215
SER
215
A
GLU
216
n
216
GLU
216
A
GLY
217
n
217
GLY
217
A
TYR
218
n
218
TYR
218
A
ILE
219
n
219
ILE
219
A
GLU
220
n
220
GLU
220
A
THR
221
n
221
THR
221
A
HIS
222
n
222
HIS
222
A
ASP
223
n
223
ASP
223
A
VAL
224
n
224
VAL
224
A
LEU
225
n
225
LEU
225
A
SER
226
n
226
SER
226
A
TRP
227
n
227
TRP
227
A
SER
228
n
228
SER
228
A
PHE
229
n
229
PHE
229
A
ALA
230
n
230
ALA
230
A
SER
231
n
231
SER
231
A
LYS
232
n
232
LYS
232
A
LEU
233
n
233
LEU
233
A
PRO
234
n
234
PRO
234
A
ASP
235
n
235
ASP
235
A
ASP
236
n
236
ASP
236
A
SER
237
n
237
SER
237
A
THR
238
n
238
THR
238
A
ALA
239
n
239
ALA
239
A
GLU
240
n
240
GLU
240
A
PRO
241
n
241
PRO
241
A
LEU
242
n
242
LEU
242
A
ASP
243
n
243
ASP
243
A
LEU
244
n
244
LEU
244
A
ALA
245
n
245
ALA
245
A
SER
246
n
246
SER
246
A
TYR
247
n
247
TYR
247
A
LEU
248
n
248
LEU
248
A
VAL
249
n
249
VAL
249
A
ARG
250
n
250
ARG
250
A
ASN
251
n
251
ASN
251
A
VAL
252
n
252
VAL
252
A
LEU
253
n
253
LEU
253
A
author_defined_assembly
4
tetrameric
A
GLU
123
A
OE2
GLU
123
1_555
A
MN
302
D
MN
MN
1_555
A
ASP
125
A
OD2
ASP
125
1_555
77.0
A
GLU
123
A
OE2
GLU
123
1_555
A
MN
302
D
MN
MN
1_555
A
ASP
133
A
OD1
ASP
133
1_555
155.7
A
ASP
125
A
OD2
ASP
125
1_555
A
MN
302
D
MN
MN
1_555
A
ASP
133
A
OD1
ASP
133
1_555
81.2
A
GLU
123
A
OE2
GLU
123
1_555
A
MN
302
D
MN
MN
1_555
A
HIS
138
A
NE2
HIS
138
1_555
80.5
A
ASP
125
A
OD2
ASP
125
1_555
A
MN
302
D
MN
MN
1_555
A
HIS
138
A
NE2
HIS
138
1_555
77.5
A
ASP
133
A
OD1
ASP
133
1_555
A
MN
302
D
MN
MN
1_555
A
HIS
138
A
NE2
HIS
138
1_555
84.5
A
ASP
125
A
OD1
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
125
A
OD2
ASP
125
1_555
51.7
A
ASP
125
A
OD1
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
LEU
127
A
O
LEU
127
1_555
73.6
A
ASP
125
A
OD2
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
LEU
127
A
O
LEU
127
1_555
104.9
A
ASP
125
A
OD1
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
ASN
129
A
OD1
ASN
129
1_555
167.2
A
ASP
125
A
OD2
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
ASN
129
A
OD1
ASN
129
1_555
139.4
A
LEU
127
A
O
LEU
127
1_555
A
CA
301
C
CA
CA
1_555
A
ASN
129
A
OD1
ASN
129
1_555
95.1
A
ASP
125
A
OD1
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
133
A
OD2
ASP
133
1_555
99.0
A
ASP
125
A
OD2
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
133
A
OD2
ASP
133
1_555
68.0
A
LEU
127
A
O
LEU
127
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
133
A
OD2
ASP
133
1_555
76.0
A
ASN
129
A
OD1
ASN
129
1_555
A
CA
301
C
CA
CA
1_555
A
ASP
133
A
OD2
ASP
133
1_555
83.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
15_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
260.1100000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
10_665
-x+1,-y+1,z
crystal symmetry operation
79.0500000000
79.0500000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_666
-y+1,-x+1,-z+1
crystal symmetry operation
79.0500000000
79.0500000000
260.1100000000
A
O
ASN
2
A
O
ASN
2
A
N
LEU
233
A
N
LEU
233
A
O
ASP
223
A
O
ASP
223
A
N
LYS
74
A
N
LYS
74
A
O
TRP
67
A
O
TRP
67
A
N
TYR
168
A
N
TYR
168
A
O
GLU
163
A
O
GLU
163
A
N
VAL
180
A
N
VAL
180
A
O
LEU
175
A
O
LEU
175
A
N
GLU
192
A
N
GLU
192
A
O
ILE
17
A
O
ILE
17
A
N
PHE
49
A
N
PHE
49
A
O
GLY
46
A
O
GLY
46
A
N
ALA
210
A
N
ALA
210
A
O
SER
205
A
O
SER
205
A
N
VAL
92
A
N
VAL
92
A
O
ILE
87
A
O
ILE
87
A
N
PHE
124
A
N
PHE
124
A
O
ALA
121
A
O
ALA
121
A
N
ASP
142
A
N
ASP
142
A
O
ILE
139
A
O
ILE
139
A
N
VAL
152
A
N
VAL
152
A
O
THR
23
A
O
THR
23
A
N
GLN
30
A
N
GLN
30
1
A
CD
LYS
9
A
CD
LYS
9
1
Y
1
A
CE
LYS
9
A
CE
LYS
9
1
Y
1
A
NZ
LYS
9
A
NZ
LYS
9
1
Y
1
A
CD
LYS
28
A
CD
LYS
28
1
Y
1
A
CE
LYS
28
A
CE
LYS
28
1
Y
1
A
NZ
LYS
28
A
NZ
LYS
28
1
Y
1
A
CD
LYS
35
A
CD
LYS
35
1
Y
1
A
CE
LYS
35
A
CE
LYS
35
1
Y
1
A
NZ
LYS
35
A
NZ
LYS
35
1
Y
1
A
CG
GLU
36
A
CG
GLU
36
1
Y
1
A
CD
GLU
36
A
CD
GLU
36
1
Y
1
A
OE1
GLU
36
A
OE1
GLU
36
1
Y
1
A
OE2
GLU
36
A
OE2
GLU
36
1
Y
1
A
CG
LYS
59
A
CG
LYS
59
1
Y
1
A
CD
LYS
59
A
CD
LYS
59
1
Y
1
A
CE
LYS
59
A
CE
LYS
59
1
Y
1
A
NZ
LYS
59
A
NZ
LYS
59
1
Y
1
A
CG
LYS
80
A
CG
LYS
80
1
Y
1
A
CD
LYS
80
A
CD
LYS
80
1
Y
1
A
CE
LYS
80
A
CE
LYS
80
1
Y
1
A
NZ
LYS
80
A
NZ
LYS
80
1
Y
1
A
NE
ARG
193
A
NE
ARG
193
1
Y
1
A
CZ
ARG
193
A
CZ
ARG
193
1
Y
1
A
NH1
ARG
193
A
NH1
ARG
193
1
Y
1
A
NH2
ARG
193
A
NH2
ARG
193
1
Y
1
A
CG
GLU
240
A
CG
GLU
240
1
Y
1
A
CD
GLU
240
A
CD
GLU
240
1
Y
1
A
OE1
GLU
240
A
OE1
GLU
240
1
Y
1
A
OE2
GLU
240
A
OE2
GLU
240
1
Y
1
A
CG
ARG
250
A
CG
ARG
250
1
Y
1
A
CD
ARG
250
A
CD
ARG
250
1
Y
1
A
NE
ARG
250
A
NE
ARG
250
1
Y
1
A
CZ
ARG
250
A
CZ
ARG
250
1
Y
1
A
NH1
ARG
250
A
NH1
ARG
250
1
Y
1
A
NH2
ARG
250
A
NH2
ARG
250
1
Y
1
B
O6
NGA
1
B
O6
NGA
1
1
N
1
A
SER
13
-25.13
-44.02
1
A
SER
79
-29.70
-73.37
1
A
ALA
84
177.08
143.06
1
A
SER
96
-23.28
137.42
1
A
ARG
99
-108.90
-146.25
1
A
LEU
105
52.03
18.09
1
A
SER
130
-34.73
-33.64
1
A
TRP
132
-155.56
-2.15
1
A
MET
136
-119.30
-167.26
1
A
PRO
234
-69.46
-178.70
1
A
THR
238
-52.13
106.53
1
A
ASN
251
-126.02
-50.92
PROTEIN_REP.PARAM
46.0
0.52
0.00
0.00
0.52
0.00
-1.03
BULK SOLVENT MODEL USED
0.234
0.006
0.194
0.194
2.60
20.00
1350
13174
10.2
100.0
RANDOM
10000000.00
0.00100
1
GROUP
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
1FAT
0.39
0.32
5.00
0.56
0.49
2.60
20.00
0
1921
40
0
1881
0.011
1.5
28.7
0.66
0.382
0.033
0.355
2.69
134
1145
10
10.5
99.9
44.7
2.60
20.00
1LU1
13175
0.15
1
15.2
7.0
99.9
0.75
2.60
2.62
2.27
7.0
99.9
phasing
AMoRE
refinement
X-PLOR
3.851
data reduction
DENZO
data scaling
SCALEPACK
THE STRUCTURE OF THE DOLICHOS BIFLORUS SEED LECTIN IN COMPLEX WITH THE FORSSMAN DISACCHARIDE
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
SER
13
A
SER
13
HELX_P
A
SER
15
A
SER
15
5
1
3
A
GLY
102
A
GLY
102
HELX_P
A
TYR
104
A
TYR
104
5
2
3
A
ASN
115
A
ASN
115
HELX_P
A
ALA
117
A
ALA
117
5
3
3
A
PRO
182
A
PRO
182
HELX_P
A
ARG
184
A
ARG
184
5
4
3
A
ILE
196
A
ILE
196
HELX_P
A
GLU
199
A
GLU
199
1
5
4
A
LEU
244
A
LEU
244
HELX_P
A
ASN
251
A
ASN
251
1
6
8
covale
1.441
both
B
NGA
1
B
O3
NGA
1_555
B
A2G
2
B
C1
A2G
1_555
metalc
2.419
A
GLU
123
A
OE2
GLU
123
1_555
A
MN
302
D
MN
MN
1_555
metalc
2.389
A
ASP
125
A
OD1
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.655
A
ASP
125
A
OD2
ASP
125
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.444
A
ASP
125
A
OD2
ASP
125
1_555
A
MN
302
D
MN
MN
1_555
metalc
2.369
A
LEU
127
A
O
LEU
127
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.103
A
ASN
129
A
OD1
ASN
129
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.428
A
ASP
133
A
OD2
ASP
133
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.429
A
ASP
133
A
OD1
ASP
133
1_555
A
MN
302
D
MN
MN
1_555
metalc
2.523
A
HIS
138
A
NE2
HIS
138
1_555
A
MN
302
D
MN
MN
1_555
LECTIN
LEGUME LECTINS, FORSSMAN DISACCHARIDE, DOLICHOS BIFLORUS SEED LECTIN, LECTIN
A
ALA
84
A
ALA
84
1
A
ASP
85
A
ASP
85
-0.21
LEC1_DOLBI
UNP
1
1
P05045
MASSTVSVVLSLFLLLLTQANSANIQSFSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYD
KSTGAVASWATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFDTFSNSGWDPSMKH
IGIDVNSIKSIATVSWDLANGENAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGY
IETHDVLSWSFASKLPDDSTAEPLDLASYLVRNVL
23
275
1LU1
1
253
P05045
A
1
1
253
1
PHE
conflict
LEU
127
1LU1
A
P05045
UNP
149
127
6
7
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
2
A
ASN
2
A
PHE
8
A
PHE
8
A
ASP
223
A
ASP
223
A
LEU
233
A
LEU
233
A
SER
66
A
SER
66
A
LYS
74
A
LYS
74
A
ASN
161
A
ASN
161
A
ASN
169
A
ASN
169
A
LEU
174
A
LEU
174
A
HIS
181
A
HIS
181
A
THR
186
A
THR
186
A
ARG
193
A
ARG
193
A
PHE
16
A
PHE
16
A
GLY
20
A
GLY
20
A
LEU
45
A
LEU
45
A
TYR
50
A
TYR
50
A
VAL
204
A
VAL
204
A
THR
212
A
THR
212
A
ASP
85
A
ASP
85
A
PRO
93
A
PRO
93
A
VAL
120
A
VAL
120
A
ASP
125
A
ASP
125
A
HIS
138
A
HIS
138
A
VAL
143
A
VAL
143
A
ALA
150
A
ALA
150
A
SER
153
A
SER
153
A
THR
23
A
THR
23
A
SER
25
A
SER
25
A
LYS
28
A
LYS
28
A
GLN
30
A
GLN
30
98
I 41 2 2