0.031602
-0.004802
-0.003113
0.000000
0.028382
-0.004795
0.000000
0.000000
0.021947
0.000000
0.000000
0.000000
Silverman, A.P.
Bu, W.
Cohen, S.M.
Lippard, S.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
79.53
83.02
81.36
31.644
35.638
46.556
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
C6 H16 N2 Pt 2
311.283
CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
N
N
154
N
N
N
155
N
PT
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
277
49743
49749
10.1074/jbc.M206979200
12377787
2.4-A Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to
a Dodecamer DNA Duplex
2002
10.2210/pdb1lu5/pdb
pdb_00001lu5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100
1
CCD
2001-08-12
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.97
1.0
19-ID
APS
0.97
SYNCHROTRON
APS BEAMLINE 19-ID
3565.316
5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3'
2
syn
polymer
3761.468
5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'
2
syn
polymer
311.283
CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX
2
syn
non-polymer
18.015
water
47
nat
water
no
no
(DC)(DC)(DT)(DC)(DT)(DG)(DG)(DT)(DC)(DT)(DC)(DC)
CCTCTGGTCTCC
A,C
polydeoxyribonucleotide
no
no
(DG)(DG)(DA)(DG)(DA)(DC)(DC)(DA)(DG)(DA)(DG)(DG)
GGAGACCAGAGG
B,D
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
3.78
67.4
VAPOR DIFFUSION, HANGING DROP
6.5
spermine, sodium cacodylate, magnesium acetate, PEG 4000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
spermine
1
sodium cacodylate
1
magnesium acetate
1
PEG 4000
1
16.638
1
19
A
1
B
24
0.013
A_DC1:DG24_B
1
-6.876
0.649
-0.197
-0.242
4.376
1
19
A
2
B
23
1.034
A_DC2:DG23_B
2
-2.902
0.569
-0.208
-0.119
3.631
1
A
3
B
22
14.439
A_DT3:DA22_B
3
-12.501
-0.044
-0.174
0.064
-1.373
1
19
A
4
B
21
2.865
A_DC4:DG21_B
4
-1.036
0.393
-0.243
0.062
2.831
1
20
A
5
B
20
-1.504
A_DT5:DA20_B
5
-5.198
-0.091
0.257
-0.295
19.479
1
19
A
6
B
19
-0.987
A_DG6:DC19_B
6
-15.020
-0.343
0.176
0.021
-6.914
1
19
A
7
B
18
3.507
A_DG7:DC18_B
7
-13.198
-0.182
-0.033
0.057
-0.657
1
20
A
8
B
17
4.441
A_DT8:DA17_B
8
-21.393
-0.209
-0.662
-0.306
-2.690
1
19
A
9
B
16
1.012
A_DC9:DG16_B
9
-13.362
0.248
0.112
-0.353
2.768
1
20
A
10
B
15
-5.152
A_DT10:DA15_B
10
-8.937
-0.688
0.132
-0.284
0.417
1
19
A
11
B
14
-6.231
A_DC11:DG14_B
11
-11.417
-0.047
0.031
-0.166
-6.664
1
19
A
12
B
13
2.772
A_DC12:DG13_B
12
-3.741
0.643
0.131
-0.102
11.888
1
19
C
25
D
48
-1.258
C_DC25:DG48_D
13
-3.584
0.695
0.018
-0.177
9.167
1
19
C
26
D
47
4.777
C_DC26:DG47_D
14
-2.726
0.502
-0.254
-0.123
4.856
1
20
C
27
D
46
2.891
C_DT27:DA46_D
15
-7.515
-0.319
-0.203
-0.218
-3.104
1
19
C
28
D
45
2.585
C_DC28:DG45_D
16
-5.048
0.070
0.135
0.349
4.278
1
20
C
29
D
44
-0.960
C_DT29:DA44_D
17
-5.197
-0.143
0.172
-0.187
21.673
1
19
C
30
D
43
4.027
C_DG30:DC43_D
18
-16.360
-0.255
0.510
0.122
-4.493
1
19
C
31
D
42
0.465
C_DG31:DC42_D
19
-16.813
-0.144
0.273
-0.030
-11.827
1
20
C
32
D
41
-2.017
C_DT32:DA41_D
20
-21.810
-0.614
-0.245
-0.145
-10.895
1
19
C
33
D
40
-1.466
C_DC33:DG40_D
21
-6.412
-0.140
0.004
-0.305
-7.263
1
20
C
34
D
39
0.132
C_DT34:DA39_D
22
-2.725
-0.664
0.466
-0.071
0.361
1
19
C
35
D
38
-4.536
C_DC35:DG38_D
23
-11.602
-0.026
0.269
-0.005
-10.105
1
19
C
36
D
37
7.515
C_DC36:DG37_D
24
-8.034
1.085
0.336
-0.305
3.233
26.373
A
A
1
2
9.203
B
B
24
23
3.536
4.171
-0.992
-2.280
AA_DC1DC2:DG23DG24_BB
1
-3.279
7.234
25.843
-6.163
1.258
3.164
28.562
A
A
2
3
4.906
B
B
23
22
3.307
2.415
0.172
-1.622
AA_DC2DT3:DA22DG23_BB
2
2.399
-4.874
28.362
-3.833
0.192
2.942
35.187
A
A
3
4
15.450
B
B
22
21
3.413
9.236
-0.327
-1.440
AA_DT3DC4:DG21DA22_BB
3
-1.081
1.808
33.973
-3.743
0.381
2.920
29.392
A
A
4
5
9.977
B
B
21
20
3.227
5.036
-0.482
-1.685
AA_DC4DT5:DA20DG21_BB
4
-1.674
3.317
28.919
-4.345
0.610
2.551
26.449
A
A
5
6
13.736
B
B
20
19
2.937
6.227
-0.699
-1.357
AA_DT5DG6:DC19DA20_BB
5
-0.328
0.722
25.716
-4.374
1.454
1.837
43.002
A
A
6
7
42.218
B
B
19
18
3.711
28.507
1.277
-1.619
AA_DG6DG7:DC18DC19_BB
6
1.655
-2.452
32.494
-4.977
-1.581
2.784
35.173
A
A
7
8
5.819
B
B
18
17
3.041
3.496
-0.743
-0.882
AA_DG7DT8:DA17DC18_BB
7
5.802
-9.657
34.535
-1.928
2.007
3.259
35.136
A
A
8
9
7.151
B
B
17
16
3.399
4.304
0.622
-0.623
AA_DT8DC9:DG16DA17_BB
8
-2.118
3.519
34.817
-1.690
-1.353
3.013
29.871
A
A
9
10
14.304
B
B
16
15
3.233
7.302
-0.493
-0.494
AA_DC9DT10:DA15DG16_BB
9
0.468
-0.918
28.981
-2.429
1.050
3.331
41.124
A
A
10
11
-2.182
B
B
15
14
3.332
-1.529
0.119
-0.224
AA_DT10DC11:DG14DA15_BB
10
4.694
-6.698
40.839
-0.150
0.350
3.224
33.313
A
A
11
12
10.867
B
B
14
13
3.359
6.194
0.081
-0.413
AA_DC11DC12:DG13DG14_BB
11
-1.324
2.323
32.722
-1.768
-0.365
2.982
26.668
C
C
25
26
5.810
D
D
48
47
3.239
2.675
-0.636
-2.316
CC_DC25DC26:DG47DG48_DD
12
0.534
-1.160
26.530
-5.688
1.512
3.298
28.527
C
C
26
27
5.435
D
D
47
46
3.479
2.674
-0.436
-1.813
CC_DC26DT27:DA46DG47_DD
13
-0.009
0.018
28.404
-4.312
0.882
2.775
34.015
C
C
27
28
17.980
D
D
46
45
3.401
10.360
0.391
-1.587
CC_DT27DC28:DG45DA46_DD
14
-0.276
0.479
32.443
-4.313
-0.711
2.831
31.425
C
C
28
29
10.291
D
D
45
44
3.154
5.546
-0.262
-1.634
CC_DC28DT29:DA44DG45_DD
15
-0.785
1.457
30.934
-3.975
0.347
2.718
25.985
C
C
29
30
8.560
D
D
44
43
2.925
3.830
-0.629
-1.529
CC_DT29DG30:DC43DA44_DD
16
-2.416
5.399
25.594
-4.316
0.820
1.919
41.709
C
C
30
31
39.530
D
D
43
42
3.675
26.173
1.173
-1.726
CC_DG30DG31:DC42DC43_DD
17
2.568
-3.879
32.663
-5.104
-1.384
2.974
34.002
C
C
31
32
7.048
D
D
42
41
3.253
4.102
-0.751
-1.227
CC_DG31DT32:DA41DC42_DD
18
4.157
-7.142
33.511
-2.726
1.922
3.130
37.773
C
C
32
33
8.018
D
D
41
40
3.255
5.175
0.559
-0.819
CC_DT32DC33:DG40DA41_DD
19
0.848
-1.313
37.420
-1.920
-0.756
3.298
29.137
C
C
33
34
7.050
D
D
40
39
3.385
3.537
-0.196
-0.575
CC_DC33DT34:DA39DG40_DD
20
-1.624
3.238
28.881
-1.935
0.025
3.106
39.370
C
C
34
35
1.452
D
D
39
38
3.119
0.977
0.059
-0.382
CC_DT34DC35:DG38DA39_DD
21
2.877
-4.274
39.257
-0.678
0.236
3.483
36.347
C
C
35
36
2.783
D
D
38
37
3.469
1.735
0.670
-0.302
CC_DC35DC36:DG37DG38_DD
22
2.089
-3.352
36.249
-0.741
-0.764
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-12-20
1
1
2008-04-28
1
2
2011-07-13
1
3
2012-02-08
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2002-05-21
REL
LPT
CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX
HOH
water
1AIO
PDB Entry 1AIO
PDB
experimental model
UNK
49
3
LPT
LPT
49
A
UNK
50
3
LPT
LPT
50
C
HOH
204
4
HOH
HOH
204
A
HOH
214
4
HOH
HOH
214
A
HOH
216
4
HOH
HOH
216
A
HOH
222
4
HOH
HOH
222
A
HOH
224
4
HOH
HOH
224
A
HOH
230
4
HOH
HOH
230
A
HOH
231
4
HOH
HOH
231
A
HOH
232
4
HOH
HOH
232
A
HOH
233
4
HOH
HOH
233
A
HOH
241
4
HOH
HOH
241
A
HOH
246
4
HOH
HOH
246
A
HOH
207
4
HOH
HOH
207
B
HOH
211
4
HOH
HOH
211
B
HOH
213
4
HOH
HOH
213
B
HOH
218
4
HOH
HOH
218
B
HOH
220
4
HOH
HOH
220
B
HOH
225
4
HOH
HOH
225
B
HOH
228
4
HOH
HOH
228
B
HOH
239
4
HOH
HOH
239
B
HOH
240
4
HOH
HOH
240
B
HOH
244
4
HOH
HOH
244
B
HOH
245
4
HOH
HOH
245
B
HOH
201
4
HOH
HOH
201
C
HOH
202
4
HOH
HOH
202
C
HOH
206
4
HOH
HOH
206
C
HOH
210
4
HOH
HOH
210
C
HOH
212
4
HOH
HOH
212
C
HOH
219
4
HOH
HOH
219
C
HOH
223
4
HOH
HOH
223
C
HOH
226
4
HOH
HOH
226
C
HOH
234
4
HOH
HOH
234
C
HOH
236
4
HOH
HOH
236
C
HOH
237
4
HOH
HOH
237
C
HOH
203
4
HOH
HOH
203
D
HOH
205
4
HOH
HOH
205
D
HOH
208
4
HOH
HOH
208
D
HOH
209
4
HOH
HOH
209
D
HOH
215
4
HOH
HOH
215
D
HOH
217
4
HOH
HOH
217
D
HOH
221
4
HOH
HOH
221
D
HOH
227
4
HOH
HOH
227
D
HOH
229
4
HOH
HOH
229
D
HOH
235
4
HOH
HOH
235
D
HOH
238
4
HOH
HOH
238
D
HOH
242
4
HOH
HOH
242
D
HOH
243
4
HOH
HOH
243
D
HOH
248
4
HOH
HOH
248
D
C
1
n
1
DC
1
A
C
2
n
2
DC
2
A
T
3
n
3
DT
3
A
C
4
n
4
DC
4
A
T
5
n
5
DT
5
A
G
6
n
6
DG
6
A
G
7
n
7
DG
7
A
T
8
n
8
DT
8
A
C
9
n
9
DC
9
A
T
10
n
10
DT
10
A
C
11
n
11
DC
11
A
C
12
n
12
DC
12
A
G
13
n
1
DG
13
B
G
14
n
2
DG
14
B
A
15
n
3
DA
15
B
G
16
n
4
DG
16
B
A
17
n
5
DA
17
B
C
18
n
6
DC
18
B
C
19
n
7
DC
19
B
A
20
n
8
DA
20
B
G
21
n
9
DG
21
B
A
22
n
10
DA
22
B
G
23
n
11
DG
23
B
G
24
n
12
DG
24
B
C
25
n
1
DC
25
C
C
26
n
2
DC
26
C
T
27
n
3
DT
27
C
C
28
n
4
DC
28
C
T
29
n
5
DT
29
C
G
30
n
6
DG
30
C
G
31
n
7
DG
31
C
T
32
n
8
DT
32
C
C
33
n
9
DC
33
C
T
34
n
10
DT
34
C
C
35
n
11
DC
35
C
C
36
n
12
DC
36
C
G
37
n
1
DG
37
D
G
38
n
2
DG
38
D
A
39
n
3
DA
39
D
G
40
n
4
DG
40
D
A
41
n
5
DA
41
D
C
42
n
6
DC
42
D
C
43
n
7
DC
43
D
A
44
n
8
DA
44
D
G
45
n
9
DG
45
D
A
46
n
10
DA
46
D
G
47
n
11
DG
47
D
G
48
n
12
DG
48
D
0.2351
0.2008
0.2345
0.2495
0.2944
565
733
10
10.00
5267
6604
author_defined_assembly
2
dimeric
author_defined_assembly
2
dimeric
A
DG
6
A
N7
DG
6
1_555
A
LPT
49
E
PT
LPT
1_555
A
LPT
49
E
N2
LPT
1_555
159.5
A
DG
6
A
N7
DG
6
1_555
A
LPT
49
E
PT
LPT
1_555
A
LPT
49
E
N1
LPT
1_555
96.4
A
LPT
49
E
N2
LPT
1_555
A
LPT
49
E
PT
LPT
1_555
A
LPT
49
E
N1
LPT
1_555
87.6
A
DG
6
A
N7
DG
6
1_555
A
LPT
49
E
PT
LPT
1_555
A
DG
7
A
N7
DG
7
1_555
92.3
A
LPT
49
E
N2
LPT
1_555
A
LPT
49
E
PT
LPT
1_555
A
DG
7
A
N7
DG
7
1_555
87.5
A
LPT
49
E
N1
LPT
1_555
A
LPT
49
E
PT
LPT
1_555
A
DG
7
A
N7
DG
7
1_555
167.2
C
DG
30
C
N7
DG
6
1_555
C
LPT
50
F
PT
LPT
1_555
C
LPT
50
F
N2
LPT
1_555
167.6
C
DG
30
C
N7
DG
6
1_555
C
LPT
50
F
PT
LPT
1_555
C
LPT
50
F
N1
LPT
1_555
73.6
C
LPT
50
F
N2
LPT
1_555
C
LPT
50
F
PT
LPT
1_555
C
LPT
50
F
N1
LPT
1_555
99.1
C
DG
30
C
N7
DG
6
1_555
C
LPT
50
F
PT
LPT
1_555
C
DG
31
C
N7
DG
7
1_555
98.5
C
LPT
50
F
N2
LPT
1_555
C
LPT
50
F
PT
LPT
1_555
C
DG
31
C
N7
DG
7
1_555
88.2
C
LPT
50
F
N1
LPT
1_555
C
LPT
50
F
PT
LPT
1_555
C
DG
31
C
N7
DG
7
1_555
171.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
2.59
0.30
108.30
110.89
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
1
2.14
0.30
108.30
110.44
B
B
B
O4'
C1'
N9
DG
DG
DG
23
23
23
N
2.40
50.0
4163
6604
4897
10.0
96.3
random
1
isotropic
THROUGHOUT
4
2
MOLECULAR REPLACEMENT
PDB Entry 1AIO
0.00
1037.00
2.40
50.0
47
1037
18
972
0
0.005
0.022
0.00
0.0003
0.000
0.004
0.005
0.000
0.075
0.000
2.4
50
1LU5
7337
4
2
0.082
0.09
1
9.2
96.3
0.251
2.40
2.49
0.277
1
96.3
data reduction
DENZO
data scaling
SCALEPACK
phasing
SHELXS
refinement
SHELXL-97
2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA Duplex
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
metalc
1.965
A
DG
6
A
N7
DG
6
1_555
A
LPT
49
E
PT
LPT
1_555
metalc
1.957
A
DG
7
A
N7
DG
7
1_555
A
LPT
49
E
PT
LPT
1_555
metalc
1.961
C
DG
30
C
N7
DG
6
1_555
C
LPT
50
F
PT
LPT
1_555
metalc
1.961
C
DG
31
C
N7
DG
7
1_555
C
LPT
50
F
PT
LPT
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
24
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
24
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
24
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
B
DG
23
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
B
DG
23
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
B
DG
23
B
N2
DG
11
1_555
hydrog
DT-DA PAIR
A
DT
3
A
N3
DT
3
1_555
B
DA
22
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N3
DC
4
1_555
B
DG
21
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N4
DC
4
1_555
B
DG
21
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
4
A
O2
DC
4
1_555
B
DG
21
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
A
DT
5
A
N3
DT
5
1_555
B
DA
20
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
5
A
O4
DT
5
1_555
B
DA
20
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
B
DC
19
B
N3
DC
7
1_555
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
B
DC
19
B
O2
DC
7
1_555
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
B
DC
19
B
N4
DC
7
1_555
hydrog
WATSON-CRICK
A
DG
7
A
N1
DG
7
1_555
B
DC
18
B
N3
DC
6
1_555
hydrog
WATSON-CRICK
A
DG
7
A
N2
DG
7
1_555
B
DC
18
B
O2
DC
6
1_555
hydrog
WATSON-CRICK
A
DG
7
A
O6
DG
7
1_555
B
DC
18
B
N4
DC
6
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
17
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
17
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N3
DC
9
1_555
B
DG
16
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N4
DC
9
1_555
B
DG
16
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
9
A
O2
DC
9
1_555
B
DG
16
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
DT
10
A
N3
DT
10
1_555
B
DA
15
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
10
A
O4
DT
10
1_555
B
DA
15
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
14
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
14
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
14
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
12
A
N3
DC
12
1_555
B
DG
13
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
12
A
N4
DC
12
1_555
B
DG
13
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
12
A
O2
DC
12
1_555
B
DG
13
B
N2
DG
1
1_555
hydrog
WATSON-CRICK
C
DC
25
C
N3
DC
1
1_555
D
DG
48
D
N1
DG
12
1_555
hydrog
WATSON-CRICK
C
DC
25
C
N4
DC
1
1_555
D
DG
48
D
O6
DG
12
1_555
hydrog
WATSON-CRICK
C
DC
25
C
O2
DC
1
1_555
D
DG
48
D
N2
DG
12
1_555
hydrog
WATSON-CRICK
C
DC
26
C
N3
DC
2
1_555
D
DG
47
D
N1
DG
11
1_555
hydrog
WATSON-CRICK
C
DC
26
C
N4
DC
2
1_555
D
DG
47
D
O6
DG
11
1_555
hydrog
WATSON-CRICK
C
DC
26
C
O2
DC
2
1_555
D
DG
47
D
N2
DG
11
1_555
hydrog
WATSON-CRICK
C
DT
27
C
N3
DT
3
1_555
D
DA
46
D
N1
DA
10
1_555
hydrog
WATSON-CRICK
C
DT
27
C
O4
DT
3
1_555
D
DA
46
D
N6
DA
10
1_555
hydrog
WATSON-CRICK
C
DC
28
C
N3
DC
4
1_555
D
DG
45
D
N1
DG
9
1_555
hydrog
WATSON-CRICK
C
DC
28
C
N4
DC
4
1_555
D
DG
45
D
O6
DG
9
1_555
hydrog
WATSON-CRICK
C
DC
28
C
O2
DC
4
1_555
D
DG
45
D
N2
DG
9
1_555
hydrog
WATSON-CRICK
C
DT
29
C
N3
DT
5
1_555
D
DA
44
D
N1
DA
8
1_555
hydrog
WATSON-CRICK
C
DT
29
C
O4
DT
5
1_555
D
DA
44
D
N6
DA
8
1_555
hydrog
WATSON-CRICK
C
DG
30
C
N1
DG
6
1_555
D
DC
43
D
N3
DC
7
1_555
hydrog
WATSON-CRICK
C
DG
30
C
N2
DG
6
1_555
D
DC
43
D
O2
DC
7
1_555
hydrog
WATSON-CRICK
C
DG
30
C
O6
DG
6
1_555
D
DC
43
D
N4
DC
7
1_555
hydrog
WATSON-CRICK
C
DG
31
C
N1
DG
7
1_555
D
DC
42
D
N3
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
31
C
N2
DG
7
1_555
D
DC
42
D
O2
DC
6
1_555
hydrog
WATSON-CRICK
C
DG
31
C
O6
DG
7
1_555
D
DC
42
D
N4
DC
6
1_555
hydrog
WATSON-CRICK
C
DT
32
C
N3
DT
8
1_555
D
DA
41
D
N1
DA
5
1_555
hydrog
WATSON-CRICK
C
DT
32
C
O4
DT
8
1_555
D
DA
41
D
N6
DA
5
1_555
hydrog
WATSON-CRICK
C
DC
33
C
N3
DC
9
1_555
D
DG
40
D
N1
DG
4
1_555
hydrog
WATSON-CRICK
C
DC
33
C
N4
DC
9
1_555
D
DG
40
D
O6
DG
4
1_555
hydrog
WATSON-CRICK
C
DC
33
C
O2
DC
9
1_555
D
DG
40
D
N2
DG
4
1_555
hydrog
WATSON-CRICK
C
DT
34
C
N3
DT
10
1_555
D
DA
39
D
N1
DA
3
1_555
hydrog
WATSON-CRICK
C
DT
34
C
O4
DT
10
1_555
D
DA
39
D
N6
DA
3
1_555
hydrog
WATSON-CRICK
C
DC
35
C
N3
DC
11
1_555
D
DG
38
D
N1
DG
2
1_555
hydrog
WATSON-CRICK
C
DC
35
C
N4
DC
11
1_555
D
DG
38
D
O6
DG
2
1_555
hydrog
WATSON-CRICK
C
DC
35
C
O2
DC
11
1_555
D
DG
38
D
N2
DG
2
1_555
hydrog
WATSON-CRICK
C
DC
36
C
N3
DC
12
1_555
D
DG
37
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
C
DC
36
C
N4
DC
12
1_555
D
DG
37
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
C
DC
36
C
O2
DC
12
1_555
D
DG
37
D
N2
DG
1
1_555
DNA
platinum-DNA complex, DNA
1LU5
PDB
1
1LU5
1LU5
PDB
2
1LU5
1
12
1LU5
1
12
1LU5
A
1
1
12
13
24
1LU5
13
24
1LU5
B
2
1
12
25
36
1LU5
25
36
1LU5
C
1
1
12
37
48
1LU5
37
48
1LU5
D
2
1
12
BINDING SITE FOR RESIDUE LPT A 49
A
LPT
49
Software
5
BINDING SITE FOR RESIDUE LPT C 50
C
LPT
50
Software
4
A
DG
6
A
DG
6
5
1_555
A
DG
7
A
DG
7
5
1_555
A
DT
8
A
DT
8
5
1_555
A
HOH
204
G
HOH
5
1_555
A
HOH
222
G
HOH
5
1_555
C
DT
29
C
DT
5
4
1_555
C
DG
30
C
DG
6
4
1_555
C
DG
31
C
DG
7
4
1_555
C
DT
32
C
DT
8
4
1_555
1
P 1