0.034083
0.000000
0.013128
0.000000
0.017393
0.000000
0.000000
0.000000
0.033691
0.000000
0.000000
0.000000
Matoba, Y.
Sugiyama, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
111.07
90.00
29.340
57.495
31.807
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
PROTEINS: STRUCT.,FUNCT.,GENET.
PSFGEY
0867
0887-3585
51
453
469
10.1002/prot.10360
12696056
Atomic resolution structure of prokaryotic phospholipase A2: Analysis of internal motion and implication for a catalytic mechanism.
2003
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
277
20059
20069
10.1074/jbc.M200263200
The crystal structure of prokaryotic phospholipase A2
2002
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
277
20051
20058
10.1074/jbc.M200264200
A novel prokaryotic phospholipase A2. Characterizaton, gene cloning and solution structure
2002
10.2210/pdb1lwb/pdb
pdb_00001lwb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
297
1
IMAGE PLATE
1997
RIGAKU RAXIS IV
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
0.71073
1.0
0.71073
ROTATING ANODE
RIGAKU RU200
13570.782
putative secreted protein
3.1.1.4
1
man
polymer
18.015
water
177
nat
water
Phospholipase A2
no
no
APADKPQVLASFTQTSASSQNAWLAANRNQSAWAAYEFDWSTDLCTQAPDNPFGFPFNTACARHDFGYRNYKAAGSFDAN
KSRIDSAFYEDMKRVCTGYTGEKNTACNSTAWTYYQAVKIFG
APADKPQVLASFTQTSASSQNAWLAANRNQSAWAAYEFDWSTDLCTQAPDNPFGFPFNTACARHDFGYRNYKAAGSFDAN
KSRIDSAFYEDMKRVCTGYTGEKNTACNSTAWTYYQAVKIFG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Streptomyces
Streptomyces
Streptomyces lividans
sample
1935
Streptomyces violaceoruber
457428
Streptomyces lividans TK24
TK24
Plasmid
pIJ680
1
1.48
17.1
VAPOR DIFFUSION, HANGING DROP
6
PEG 6000, lithium sulfate, sodium cacodylate, VAPOR DIFFUSION, HANGING DROP, temperature 297K
297
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Refinement description
1
0
2003-06-10
1
1
2008-04-28
1
2
2011-07-13
1
3
2017-10-11
1
4
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
1FAZ contains Crystal structure of calcium-free form at 1.4 A resolution
1KP4 contains Crystal structure of calcium-bound form at 1.6 A resolution
1IT4 contains Solution structure of calcium-bound form
1IT5 contains Solution structure of calcium-free form
RCSB
Y
PDBJ
2002-05-31
REL
HOH
water
1FAZ
PDB ENTRY 1FAZ
PDB
experimental model
HOH
201
2
HOH
HOH
201
A
HOH
202
2
HOH
HOH
202
A
HOH
203
2
HOH
HOH
203
A
HOH
204
2
HOH
HOH
204
A
HOH
205
2
HOH
HOH
205
A
HOH
206
2
HOH
HOH
206
A
HOH
207
2
HOH
HOH
207
A
HOH
208
2
HOH
HOH
208
A
HOH
209
2
HOH
HOH
209
A
HOH
210
2
HOH
HOH
210
A
HOH
211
2
HOH
HOH
211
A
HOH
212
2
HOH
HOH
212
A
HOH
213
2
HOH
HOH
213
A
HOH
214
2
HOH
HOH
214
A
HOH
215
2
HOH
HOH
215
A
HOH
216
2
HOH
HOH
216
A
HOH
217
2
HOH
HOH
217
A
HOH
218
2
HOH
HOH
218
A
HOH
219
2
HOH
HOH
219
A
HOH
220
2
HOH
HOH
220
A
HOH
221
2
HOH
HOH
221
A
HOH
222
2
HOH
HOH
222
A
HOH
223
2
HOH
HOH
223
A
HOH
224
2
HOH
HOH
224
A
HOH
225
2
HOH
HOH
225
A
HOH
226
2
HOH
HOH
226
A
HOH
227
2
HOH
HOH
227
A
HOH
228
2
HOH
HOH
228
A
HOH
229
2
HOH
HOH
229
A
HOH
230
2
HOH
HOH
230
A
HOH
231
2
HOH
HOH
231
A
HOH
232
2
HOH
HOH
232
A
HOH
233
2
HOH
HOH
233
A
HOH
234
2
HOH
HOH
234
A
HOH
235
2
HOH
HOH
235
A
HOH
236
2
HOH
HOH
236
A
HOH
237
2
HOH
HOH
237
A
HOH
238
2
HOH
HOH
238
A
HOH
239
2
HOH
HOH
239
A
HOH
240
2
HOH
HOH
240
A
HOH
241
2
HOH
HOH
241
A
HOH
242
2
HOH
HOH
242
A
HOH
243
2
HOH
HOH
243
A
HOH
244
2
HOH
HOH
244
A
HOH
245
2
HOH
HOH
245
A
HOH
246
2
HOH
HOH
246
A
HOH
247
2
HOH
HOH
247
A
HOH
248
2
HOH
HOH
248
A
HOH
249
2
HOH
HOH
249
A
HOH
250
2
HOH
HOH
250
A
HOH
251
2
HOH
HOH
251
A
HOH
252
2
HOH
HOH
252
A
HOH
253
2
HOH
HOH
253
A
HOH
254
2
HOH
HOH
254
A
HOH
255
2
HOH
HOH
255
A
HOH
256
2
HOH
HOH
256
A
HOH
257
2
HOH
HOH
257
A
HOH
258
2
HOH
HOH
258
A
HOH
259
2
HOH
HOH
259
A
HOH
260
2
HOH
HOH
260
A
HOH
261
2
HOH
HOH
261
A
HOH
262
2
HOH
HOH
262
A
HOH
263
2
HOH
HOH
263
A
HOH
264
2
HOH
HOH
264
A
HOH
265
2
HOH
HOH
265
A
HOH
266
2
HOH
HOH
266
A
HOH
267
2
HOH
HOH
267
A
HOH
268
2
HOH
HOH
268
A
HOH
269
2
HOH
HOH
269
A
HOH
270
2
HOH
HOH
270
A
HOH
271
2
HOH
HOH
271
A
HOH
272
2
HOH
HOH
272
A
HOH
273
2
HOH
HOH
273
A
HOH
274
2
HOH
HOH
274
A
HOH
275
2
HOH
HOH
275
A
HOH
276
2
HOH
HOH
276
A
HOH
277
2
HOH
HOH
277
A
HOH
278
2
HOH
HOH
278
A
HOH
279
2
HOH
HOH
279
A
HOH
280
2
HOH
HOH
280
A
HOH
281
2
HOH
HOH
281
A
HOH
282
2
HOH
HOH
282
A
HOH
283
2
HOH
HOH
283
A
HOH
284
2
HOH
HOH
284
A
HOH
285
2
HOH
HOH
285
A
HOH
286
2
HOH
HOH
286
A
HOH
287
2
HOH
HOH
287
A
HOH
288
2
HOH
HOH
288
A
HOH
289
2
HOH
HOH
289
A
HOH
290
2
HOH
HOH
290
A
HOH
291
2
HOH
HOH
291
A
HOH
292
2
HOH
HOH
292
A
HOH
293
2
HOH
HOH
293
A
HOH
294
2
HOH
HOH
294
A
HOH
295
2
HOH
HOH
295
A
HOH
296
2
HOH
HOH
296
A
HOH
297
2
HOH
HOH
297
A
HOH
298
2
HOH
HOH
298
A
HOH
299
2
HOH
HOH
299
A
HOH
300
2
HOH
HOH
300
A
HOH
301
2
HOH
HOH
301
A
HOH
302
2
HOH
HOH
302
A
HOH
303
2
HOH
HOH
303
A
HOH
304
2
HOH
HOH
304
A
HOH
305
2
HOH
HOH
305
A
HOH
306
2
HOH
HOH
306
A
HOH
307
2
HOH
HOH
307
A
HOH
308
2
HOH
HOH
308
A
HOH
309
2
HOH
HOH
309
A
HOH
310
2
HOH
HOH
310
A
HOH
311
2
HOH
HOH
311
A
HOH
312
2
HOH
HOH
312
A
HOH
313
2
HOH
HOH
313
A
HOH
314
2
HOH
HOH
314
A
HOH
315
2
HOH
HOH
315
A
HOH
316
2
HOH
HOH
316
A
HOH
317
2
HOH
HOH
317
A
HOH
318
2
HOH
HOH
318
A
HOH
319
2
HOH
HOH
319
A
HOH
320
2
HOH
HOH
320
A
HOH
321
2
HOH
HOH
321
A
HOH
322
2
HOH
HOH
322
A
HOH
323
2
HOH
HOH
323
A
HOH
324
2
HOH
HOH
324
A
HOH
325
2
HOH
HOH
325
A
HOH
326
2
HOH
HOH
326
A
HOH
327
2
HOH
HOH
327
A
HOH
328
2
HOH
HOH
328
A
HOH
329
2
HOH
HOH
329
A
HOH
330
2
HOH
HOH
330
A
HOH
331
2
HOH
HOH
331
A
HOH
332
2
HOH
HOH
332
A
HOH
333
2
HOH
HOH
333
A
HOH
334
2
HOH
HOH
334
A
HOH
335
2
HOH
HOH
335
A
HOH
336
2
HOH
HOH
336
A
HOH
337
2
HOH
HOH
337
A
HOH
338
2
HOH
HOH
338
A
HOH
339
2
HOH
HOH
339
A
HOH
340
2
HOH
HOH
340
A
HOH
341
2
HOH
HOH
341
A
HOH
342
2
HOH
HOH
342
A
HOH
343
2
HOH
HOH
343
A
HOH
344
2
HOH
HOH
344
A
HOH
345
2
HOH
HOH
345
A
HOH
346
2
HOH
HOH
346
A
HOH
347
2
HOH
HOH
347
A
HOH
348
2
HOH
HOH
348
A
HOH
349
2
HOH
HOH
349
A
HOH
350
2
HOH
HOH
350
A
HOH
351
2
HOH
HOH
351
A
HOH
352
2
HOH
HOH
352
A
HOH
353
2
HOH
HOH
353
A
HOH
354
2
HOH
HOH
354
A
HOH
355
2
HOH
HOH
355
A
HOH
356
2
HOH
HOH
356
A
HOH
357
2
HOH
HOH
357
A
HOH
358
2
HOH
HOH
358
A
HOH
359
2
HOH
HOH
359
A
HOH
360
2
HOH
HOH
360
A
HOH
361
2
HOH
HOH
361
A
HOH
362
2
HOH
HOH
362
A
HOH
363
2
HOH
HOH
363
A
HOH
364
2
HOH
HOH
364
A
HOH
365
2
HOH
HOH
365
A
HOH
366
2
HOH
HOH
366
A
HOH
367
2
HOH
HOH
367
A
HOH
368
2
HOH
HOH
368
A
HOH
369
2
HOH
HOH
369
A
HOH
370
2
HOH
HOH
370
A
HOH
371
2
HOH
HOH
371
A
HOH
372
2
HOH
HOH
372
A
HOH
373
2
HOH
HOH
373
A
HOH
374
2
HOH
HOH
374
A
HOH
375
2
HOH
HOH
375
A
HOH
376
2
HOH
HOH
376
A
HOH
377
2
HOH
HOH
377
A
ALA
1
n
1
ALA
1
A
PRO
2
n
2
PRO
2
A
ALA
3
n
3
ALA
3
A
ASP
4
n
4
ASP
4
A
LYS
5
n
5
LYS
5
A
PRO
6
n
6
PRO
6
A
GLN
7
n
7
GLN
7
A
VAL
8
n
8
VAL
8
A
LEU
9
n
9
LEU
9
A
ALA
10
n
10
ALA
10
A
SER
11
n
11
SER
11
A
PHE
12
n
12
PHE
12
A
THR
13
n
13
THR
13
A
GLN
14
n
14
GLN
14
A
THR
15
n
15
THR
15
A
SER
16
n
16
SER
16
A
ALA
17
n
17
ALA
17
A
SER
18
n
18
SER
18
A
SER
19
n
19
SER
19
A
GLN
20
n
20
GLN
20
A
ASN
21
n
21
ASN
21
A
ALA
22
n
22
ALA
22
A
TRP
23
n
23
TRP
23
A
LEU
24
n
24
LEU
24
A
ALA
25
n
25
ALA
25
A
ALA
26
n
26
ALA
26
A
ASN
27
n
27
ASN
27
A
ARG
28
n
28
ARG
28
A
ASN
29
n
29
ASN
29
A
GLN
30
n
30
GLN
30
A
SER
31
n
31
SER
31
A
ALA
32
n
32
ALA
32
A
TRP
33
n
33
TRP
33
A
ALA
34
n
34
ALA
34
A
ALA
35
n
35
ALA
35
A
TYR
36
n
36
TYR
36
A
GLU
37
n
37
GLU
37
A
PHE
38
n
38
PHE
38
A
ASP
39
n
39
ASP
39
A
TRP
40
n
40
TRP
40
A
SER
41
n
41
SER
41
A
THR
42
n
42
THR
42
A
ASP
43
n
43
ASP
43
A
LEU
44
n
44
LEU
44
A
CYS
45
n
45
CYS
45
A
THR
46
n
46
THR
46
A
GLN
47
n
47
GLN
47
A
ALA
48
n
48
ALA
48
A
PRO
49
n
49
PRO
49
A
ASP
50
n
50
ASP
50
A
ASN
51
n
51
ASN
51
A
PRO
52
n
52
PRO
52
A
PHE
53
n
53
PHE
53
A
GLY
54
n
54
GLY
54
A
PHE
55
n
55
PHE
55
A
PRO
56
n
56
PRO
56
A
PHE
57
n
57
PHE
57
A
ASN
58
n
58
ASN
58
A
THR
59
n
59
THR
59
A
ALA
60
n
60
ALA
60
A
CYS
61
n
61
CYS
61
A
ALA
62
n
62
ALA
62
A
ARG
63
n
63
ARG
63
A
HIS
64
n
64
HIS
64
A
ASP
65
n
65
ASP
65
A
PHE
66
n
66
PHE
66
A
GLY
67
n
67
GLY
67
A
TYR
68
n
68
TYR
68
A
ARG
69
n
69
ARG
69
A
ASN
70
n
70
ASN
70
A
TYR
71
n
71
TYR
71
A
LYS
72
n
72
LYS
72
A
ALA
73
n
73
ALA
73
A
ALA
74
n
74
ALA
74
A
GLY
75
n
75
GLY
75
A
SER
76
n
76
SER
76
A
PHE
77
n
77
PHE
77
A
ASP
78
n
78
ASP
78
A
ALA
79
n
79
ALA
79
A
ASN
80
n
80
ASN
80
A
LYS
81
n
81
LYS
81
A
SER
82
n
82
SER
82
A
ARG
83
n
83
ARG
83
A
ILE
84
n
84
ILE
84
A
ASP
85
n
85
ASP
85
A
SER
86
n
86
SER
86
A
ALA
87
n
87
ALA
87
A
PHE
88
n
88
PHE
88
A
TYR
89
n
89
TYR
89
A
GLU
90
n
90
GLU
90
A
ASP
91
n
91
ASP
91
A
MET
92
n
92
MET
92
A
LYS
93
n
93
LYS
93
A
ARG
94
n
94
ARG
94
A
VAL
95
n
95
VAL
95
A
CYS
96
n
96
CYS
96
A
THR
97
n
97
THR
97
A
GLY
98
n
98
GLY
98
A
TYR
99
n
99
TYR
99
A
THR
100
n
100
THR
100
A
GLY
101
n
101
GLY
101
A
GLU
102
n
102
GLU
102
A
LYS
103
n
103
LYS
103
A
ASN
104
n
104
ASN
104
A
THR
105
n
105
THR
105
A
ALA
106
n
106
ALA
106
A
CYS
107
n
107
CYS
107
A
ASN
108
n
108
ASN
108
A
SER
109
n
109
SER
109
A
THR
110
n
110
THR
110
A
ALA
111
n
111
ALA
111
A
TRP
112
n
112
TRP
112
A
THR
113
n
113
THR
113
A
TYR
114
n
114
TYR
114
A
TYR
115
n
115
TYR
115
A
GLN
116
n
116
GLN
116
A
ALA
117
n
117
ALA
117
A
VAL
118
n
118
VAL
118
A
LYS
119
n
119
LYS
119
A
ILE
120
n
120
ILE
120
A
PHE
121
n
121
PHE
121
A
GLY
122
n
122
GLY
122
A
0.0901
0.1034
0.0873
0.0972
0.1277
0.1373
2934
3423
9.3
9.1
31531
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-7.34
0.90
118.30
110.96
A
A
A
CB
CG
OD1
ASP
ASP
ASP
50
50
50
N
1
10.34
0.90
118.30
128.64
A
A
A
CB
CG
OD2
ASP
ASP
ASP
50
50
50
N
1
5.76
0.60
121.00
126.76
A
A
A
CB
CG
CD2
TYR
TYR
TYR
68
68
68
N
1
-4.21
0.60
121.00
116.79
A
A
A
CB
CG
CD1
TYR
TYR
TYR
68
68
68
N
1
6.55
0.90
118.30
124.85
A
A
A
CB
CG
OD2
ASP
ASP
ASP
85
85
85
N
1
3.88
0.50
120.30
124.18
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
94
94
94
N
1
4.32
0.60
121.00
125.32
A
A
A
CB
CG
CD2
TYR
TYR
TYR
99
99
99
N
1
5.03
0.80
121.30
126.33
A
A
A
CG
CD2
CE2
TYR
TYR
TYR
99
99
99
N
1
A
LEU
44
56.58
-138.43
ANISOTROPIC TEMPERATURE FACTOR WAS INTRODUCED.
0.1034
0.1034
0.1034
1.05
10.00
10812
3423
37649
37649
13414
9.1
82.2
RANDOM
1
FREE R
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1FAZ
Engh & Huber
34
844.00
1120.70
1.05
10.00
202
2054
0
0
1852
0.022
0.035
0.000
0.0225
0.104
0.128
0.035
0.010
0.044
0.132
0.923
100
1LWB
45532
2
1
0.072
1
8.21
2.65
67.48
0.228
0.923
0.954
1.64
1418
22.75
model building
X-PLOR
refinement
SHELXL-97
phasing
X-PLOR
Crystal structure of prokaryotic phospholipase A2 at atomic resolution
1
N
N
2
N
N
This enzyme is a monomeric protein in solution.
A
ASP
4
A
ASP
4
HELX_P
A
PHE
12
A
PHE
12
1
1
9
A
SER
16
A
SER
16
HELX_P
A
ASN
29
A
ASN
29
1
2
14
A
GLN
30
A
GLN
30
HELX_P
A
GLU
37
A
GLU
37
5
3
8
A
PHE
57
A
PHE
57
HELX_P
A
GLY
75
A
GLY
75
1
4
19
A
SER
76
A
SER
76
HELX_P
A
THR
97
A
THR
97
1
5
22
A
THR
100
A
THR
100
HELX_P
A
ILE
120
A
ILE
120
1
6
21
disulf
2.016
A
CYS
45
A
SG
CYS
45
1_555
A
CYS
61
A
SG
CYS
61
1_555
disulf
2.020
A
CYS
96
A
SG
CYS
96
1_555
A
CYS
107
A
SG
CYS
107
1_555
HYDROLASE
Phospholipase A2, atomic resolution, internal motion, HYDROLASE
Q9Z4W2_STRCO
UNP
1
30
Q9Z4W2
APADKPQVLASFTQTSASSQNAWLAANRNQSAWAAYEFDWSTDLCTQAPDNPFGFPFNTACARHDFGYRNYKAAGSFDAN
KSRIDSAFYEDMKRVCTGYTGEKNTACNSTAWTYYQAVKIFG
30
151
1LWB
1
122
Q9Z4W2
A
1
1
122
4
P 1 21 1