0.022124 0.000000 0.000000 0.000000 0.011442 0.000000 0.000000 0.000000 0.004655 0.00000 0.00000 0.00000 Moure, C.M. Gimble, F.S. Quiocho, F.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 45.200 87.400 214.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 9 764 770 10.1038/nsb840 12219083 Crystal structure of the intein homing endonuclease PI-SceI bound to its recognition sequence. 2002 US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 89 555 564 10.1016/S0092-8674(00)80237-8 Crystal structure of PI-SceI, a homing endonuclease with protein splicing activity 1997 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 200 1 CCD 2000-11-27 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 1.0 1.0 14-BM-C APS 1.0 SYNCHROTRON APS BEAMLINE 14-BM-C 11599.467 PI-SceI DNA substrate top strand 1 syn polymer 11172.185 PI-SceI DNA substrate bottom strand 1 syn polymer 51379.051 ENDONUCLEASE PI-SCEI 3.1.-.- 1 man polymer 18.015 water 15 nat water PI-SceI, VMA-derived endonuclease, VDE, SCE VMA intein no no (DC)(DT)(DC)(DT)(DA)(DT)(DG)(DT)(DC)(DG)(DG)(DG)(DT)(DG)(DC)(DG)(DG)(DA)(DG)(DA) (DA)(DA)(DG)(DA)(DG)(DG)(DT)(DA)(DA)(DT)(DG)(DA)(DA)(DA)(DT)(DG)(DG) CTCTATGTCGGGTGCGGAGAAAGAGGTAATGAAATGG B polydeoxyribonucleotide no no (DG)(DC)(DC)(DA)(DT)(DT)(DT)(DC)(DA)(DT)(DT)(DA)(DC)(DC)(DT)(DC)(DT)(DT)(DT)(DC) (DT)(DC)(DC)(DG)(DC)(DA)(DC)(DC)(DC)(DG)(DA)(DC)(DA)(DT)(DA)(DG)(DA) GCCATTTCATTACCTCTTTCTCCGCACCCGACATAGA C polydeoxyribonucleotide no yes CFAKGTNVL(MSE)ADGSIECIENIEVGNKV(MSE)GKDGRPREVIKLPRGRET(MSE)YSVVQKSQHRAHKSDSSREVP ELLKFTCNATHELVVRTPRSVRRLSRTIKGVEYFEVITFE(MSE)GQKKAPDGRIVELVKEVSKSYPISEGPERANELVE SYRKASNKAYFEWTIEARDLSLLGSHVRKATYQTYAPILYENDHFFDY(MSE)QKSKFHLTIEGPKVLAYLLGLWIGDGL SDRATFSVDSRDTSL(MSE)ERVTEYAEKLNLCAEYKDRKEPQVAKTVNLYSKVVRGNGIRNNLNTENPLWDAIVGLGFL KDGVKNIPSFLSTDNIGTRETFLAGLIDSDGYVTDEHGIKATIKTIHTSVRDGLVSLARSLGLVVSVNAEPAKVD(MSE) NGTKHKISYAIY(MSE)SGGDVLLNVLSKCAGSKKFRPAPAAAFARECRGFYFELQELKEDDYYGITLSDDSDHQFLLAN QVVVHN CFAKGTNVLMADGSIECIENIEVGNKVMGKDGRPREVIKLPRGRETMYSVVQKSQHRAHKSDSSREVPELLKFTCNATHE LVVRTPRSVRRLSRTIKGVEYFEVITFEMGQKKAPDGRIVELVKEVSKSYPISEGPERANELVESYRKASNKAYFEWTIE ARDLSLLGSHVRKATYQTYAPILYENDHFFDYMQKSKFHLTIEGPKVLAYLLGLWIGDGLSDRATFSVDSRDTSLMERVT EYAEKLNLCAEYKDRKEPQVAKTVNLYSKVVRGNGIRNNLNTENPLWDAIVGLGFLKDGVKNIPSFLSTDNIGTRETFLA GLIDSDGYVTDEHGIKATIKTIHTSVRDGLVSLARSLGLVVSVNAEPAKVDMNGTKHKISYAIYMSGGDVLLNVLSKCAG SKKFRPAPAAAFARECRGFYFELQELKEDDYYGITLSDDSDHQFLLANQVVVHN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n baker's yeast Saccharomyces Escherichia sample VMA1 4932 Saccharomyces cerevisiae 562 Escherichia coli DL41 (DE3) PLASMID PT7PI-SCEI 1 2.83 56.49 VAPOR DIFFUSION, HANGING DROP 5.8 PEG 3550, na citrate, ammonium acetate, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 PEG 3550 1 na citrate 1 ammonium acetate 1 na citrate 2 2.275 1 20 B 2 C 37 -6.217 B_DT2:DA37_C 1 -6.145 0.078 -0.933 -0.227 -9.674 1 19 B 3 C 36 0.559 B_DC3:DG36_C 2 9.463 0.358 0.227 -0.075 -13.386 1 20 B 4 C 35 2.134 B_DT4:DA35_C 3 -5.632 -0.197 0.603 -0.037 -7.838 1 20 B 5 C 34 7.301 B_DA5:DT34_C 4 -9.805 0.085 -0.246 0.164 -11.194 1 20 B 6 C 33 6.780 B_DT6:DA33_C 5 -4.944 -0.002 0.396 -0.086 -9.232 1 19 B 7 C 32 1.374 B_DG7:DC32_C 6 5.738 -0.500 -0.368 -0.271 -11.377 1 20 B 8 C 31 -3.151 B_DT8:DA31_C 7 -3.325 -0.147 0.403 -0.317 -14.676 1 19 B 9 C 30 -2.152 B_DC9:DG30_C 8 -1.981 -0.006 0.213 -0.010 3.896 1 19 B 10 C 29 -6.278 B_DG10:DC29_C 9 6.530 -0.102 0.236 -0.039 10.440 1 19 B 11 C 28 -4.837 B_DG11:DC28_C 10 -7.919 0.061 0.517 -0.241 10.756 1 19 B 12 C 27 -6.670 B_DG12:DC27_C 11 0.098 0.291 0.296 -0.055 -5.346 1 20 B 13 C 26 2.363 B_DT13:DA26_C 12 -11.715 0.022 -0.113 -0.098 -23.464 1 19 B 14 C 25 -4.484 B_DG14:DC25_C 13 -16.587 -0.407 0.173 -0.003 -24.219 1 19 B 15 C 24 -10.553 B_DC15:DG24_C 14 11.464 -0.452 0.042 0.109 1.765 1 19 B 16 C 23 0.705 B_DG16:DC23_C 15 15.702 0.025 0.177 -0.034 -17.378 1 19 B 17 C 22 5.542 B_DG17:DC22_C 16 -0.802 0.062 -1.296 -0.008 3.043 1 20 B 18 C 21 -4.499 B_DA18:DT21_C 17 -3.876 0.363 -0.583 -0.336 11.002 1 19 B 19 C 20 -1.872 B_DG19:DC20_C 18 -4.591 0.328 -0.249 -0.097 23.213 1 20 B 20 C 19 -3.904 B_DA20:DT19_C 19 -21.889 0.371 -0.263 0.050 5.543 1 20 B 21 C 18 0.695 B_DA21:DT18_C 20 -17.686 0.021 0.480 -0.032 8.528 1 20 B 22 C 17 -4.013 B_DA22:DT17_C 21 -2.393 0.320 0.213 0.020 4.763 1 19 B 23 C 16 0.328 B_DG23:DC16_C 22 -2.800 0.215 0.107 -0.067 -4.209 1 20 B 24 C 15 -6.340 B_DA24:DT15_C 23 9.288 0.088 -0.255 -0.145 18.834 1 19 B 25 C 14 -3.957 B_DG25:DC14_C 24 6.927 0.015 0.286 0.064 -5.824 1 19 B 26 C 13 2.715 B_DG26:DC13_C 25 -8.740 0.069 -0.441 -0.018 -0.585 1 20 B 27 C 12 2.686 B_DT27:DA12_C 26 -1.364 -0.099 -0.130 -0.130 5.030 1 20 B 28 C 11 5.330 B_DA28:DT11_C 27 -10.463 0.365 0.048 -0.281 -11.615 1 20 B 29 C 10 -4.507 B_DA29:DT10_C 28 -6.821 -0.020 -0.494 0.048 -3.372 1 20 B 30 C 9 -3.128 B_DT30:DA9_C 29 -3.314 0.065 -0.150 -0.084 -10.323 1 19 B 31 C 8 -0.673 B_DG31:DC8_C 30 -1.035 -0.124 -0.888 -0.136 0.915 1 20 B 32 C 7 -2.527 B_DA32:DT7_C 31 8.183 -0.177 -0.486 -0.298 7.504 1 20 B 33 C 6 4.985 B_DA33:DT6_C 32 -0.385 0.080 0.170 -0.103 0.835 1 20 B 34 C 5 -2.804 B_DA34:DT5_C 33 0.701 -0.270 0.625 -0.006 8.140 1 20 B 35 C 4 -6.577 B_DT35:DA4_C 34 -6.650 -0.282 0.070 -0.071 19.842 1 19 B 36 C 3 -0.921 B_DG36:DC3_C 35 -7.708 -0.120 0.154 -0.108 13.234 1 19 B 37 C 2 -5.627 B_DG37:DC2_C 36 -5.579 0.370 -0.644 -0.188 3.340 35.683 B B 2 3 13.638 C C 37 36 3.588 8.219 -0.069 -0.381 BB_DT2DC3:DG36DA37_CC 1 -7.920 13.142 33.865 -1.917 -1.137 3.257 32.994 B B 3 4 1.605 C C 36 35 3.330 0.910 -0.250 -1.373 BB_DC3DT4:DA35DG36_CC 2 2.968 -5.233 32.852 -2.573 0.948 3.162 46.613 B B 4 5 -4.175 C C 35 34 3.167 -3.293 0.785 1.063 BB_DT4DA5:DT34DA35_CC 3 6.136 -7.781 46.119 1.612 -0.492 3.422 33.869 B B 5 6 10.162 C C 34 33 3.484 5.876 -0.437 -0.229 BB_DA5DT6:DA33DT34_CC 4 -4.316 7.464 33.098 -1.404 0.008 3.182 36.642 B B 6 7 7.756 C C 33 32 3.196 4.859 -0.433 -0.061 BB_DT6DG7:DC32DA33_CC 5 -2.338 3.732 36.256 -0.750 0.375 3.092 31.031 B B 7 8 9.877 C C 32 31 3.319 5.229 -0.286 -1.073 BB_DG7DT8:DA31DC32_CC 6 -5.891 11.126 30.039 -3.007 -0.594 3.395 37.302 B B 8 9 -9.027 C C 31 30 3.325 -5.751 -0.710 -0.565 BB_DT8DC9:DG30DA31_CC 7 -1.404 2.204 36.846 -0.096 0.919 2.956 35.707 B B 9 10 -5.847 C C 30 29 3.056 -3.577 -0.128 0.747 BB_DC9DG10:DC29DG30_CC 8 2.201 -3.597 35.468 1.694 0.503 3.158 34.662 B B 10 11 7.479 C C 29 28 3.169 4.443 -0.111 0.093 BB_DG10DG11:DC28DC29_CC 9 -1.347 2.268 34.359 -0.506 -0.015 3.311 42.152 B B 11 12 -7.786 C C 28 27 3.463 -5.585 0.238 0.940 BB_DG11DG12:DC27DC28_CC 10 -0.862 1.201 41.789 1.906 -0.424 3.721 35.625 B B 12 13 -2.968 C C 27 26 3.765 -1.812 -0.154 0.040 BB_DG12DT13:DA26DC27_CC 11 3.910 -6.406 35.372 0.368 0.904 3.023 54.727 B B 13 14 -14.502 C C 26 25 3.773 -13.163 -0.920 3.360 BB_DT13DG14:DC25DA26_CC 12 -9.247 10.187 52.485 4.497 0.409 3.752 30.247 B B 14 15 15.908 C C 25 24 3.598 8.151 -0.346 1.074 BB_DG14DC15:DG24DC25_CC 13 -5.796 11.312 28.581 0.149 -0.695 2.241 40.256 B B 15 16 -16.579 C C 24 23 2.964 -11.220 0.100 2.081 BB_DC15DG16:DC23DG24_CC 14 -6.728 9.941 38.155 4.064 -0.769 3.006 35.299 B B 16 17 62.834 C C 23 22 4.300 30.962 0.334 1.158 BB_DG16DG17:DC22DC23_CC 15 6.993 -14.191 15.646 -5.338 1.086 3.110 32.488 B B 17 18 8.830 C C 22 21 2.905 4.891 -0.601 1.198 BB_DG17DA18:DT21DC22_CC 16 -6.408 11.568 31.498 1.341 0.025 3.176 30.870 B B 18 19 6.612 C C 21 20 3.125 3.502 -0.378 0.431 BB_DA18DG19:DC20DT21_CC 17 -4.174 7.881 30.397 0.149 -0.078 3.061 32.574 B B 19 20 2.910 C C 20 19 3.087 1.631 -0.206 -0.512 BB_DG19DA20:DT19DC20_CC 18 -0.468 0.834 32.531 -1.180 0.292 3.559 44.135 B B 20 21 -7.813 C C 19 18 3.676 -5.852 0.312 0.495 BB_DA20DA21:DT18DT19_CC 19 -2.756 3.680 43.682 1.268 -0.703 3.001 36.055 B B 21 22 -17.005 C C 18 17 3.292 -10.385 -0.067 0.572 BB_DA21DA22:DT17DT18_CC 20 0.041 -0.067 34.574 2.372 0.115 3.568 35.986 B B 22 23 1.360 C C 17 16 3.559 0.840 0.444 -0.398 BB_DA22DG23:DC16DT17_CC 21 1.944 -3.148 35.925 -0.775 -0.418 2.952 34.476 B B 23 24 21.520 C C 16 15 3.330 12.477 -0.719 -0.552 BB_DG23DA24:DT15DC16_CC 22 -1.627 2.807 32.163 -2.861 0.962 2.675 35.726 B B 24 25 -5.943 C C 15 14 2.706 -3.624 -0.004 -0.159 BB_DA24DG25:DC14DT15_CC 23 -5.876 9.634 35.074 0.175 -0.699 3.651 38.935 B B 25 26 9.271 C C 14 13 3.842 6.148 -0.184 -0.779 BB_DG25DG26:DC13DC14_CC 24 3.326 -5.014 38.326 -2.030 0.741 3.597 30.339 B B 26 27 -13.958 C C 13 12 3.444 -7.208 -0.600 -0.848 BB_DG26DT27:DA12DC13_CC 25 -4.752 9.201 29.112 -0.025 0.095 3.209 36.775 B B 27 28 11.181 C C 12 11 3.147 7.013 0.204 0.644 BB_DT27DA28:DT11DA12_CC 26 -0.586 0.935 36.119 0.085 -0.401 3.534 33.940 B B 28 29 7.901 C C 11 10 3.675 4.592 -0.117 -0.619 BB_DA28DA29:DT10DT11_CC 27 3.309 -5.694 33.478 -1.878 0.789 3.131 33.366 B B 29 30 0.503 C C 10 9 3.141 0.289 0.257 -0.944 BB_DA29DT30:DA9DT10_CC 28 -0.339 0.591 33.363 -1.690 -0.502 3.760 35.824 B B 30 31 13.104 C C 9 8 3.577 7.949 0.483 1.119 BB_DT30DG31:DC8DA9_CC 29 6.907 -11.387 34.290 0.509 0.354 1.814 28.119 B B 31 32 39.367 C C 8 7 3.004 17.509 -0.025 -0.717 BB_DG31DA32:DT7DC8_CC 30 -6.976 15.685 20.963 -4.968 -1.339 2.986 38.905 B B 32 33 -11.644 C C 7 6 3.081 -7.695 -0.061 0.153 BB_DA32DA33:DT6DT7_CC 31 -4.014 6.074 37.961 1.108 -0.367 3.609 38.264 B B 33 34 -11.402 C C 6 5 3.487 -7.400 -0.594 -0.723 BB_DA33DA34:DT5DT6_CC 32 -6.073 9.358 37.090 -0.077 0.064 3.011 31.982 B B 34 35 -1.928 C C 5 4 3.097 -1.059 -0.663 -1.208 BB_DA34DT35:DA4DT5_CC 33 4.574 -8.330 31.645 -2.013 1.979 2.941 30.787 B B 35 36 8.114 C C 4 3 2.973 4.292 0.275 0.103 BB_DT35DG36:DC3DA4_CC 34 -1.666 3.149 30.449 -0.568 -0.813 3.469 33.947 B B 36 37 8.851 C C 3 2 3.628 5.141 -0.187 -0.586 BB_DG36DG37:DC2DC3_CC 35 3.260 -5.612 33.413 -1.905 0.892 repository Initial release Version format compliance Version format compliance 1 0 2002-09-27 1 1 2008-04-28 1 2 2011-07-13 PI-SCEI, A HOMING ENDONUCLEASE WITH PROTEIN SPLICING Crystal structure of the intein homing endonuclease bound to its recognition sequence RCSB Y RCSB 2002-06-03 REL REL HOH water HOH 2 4 HOH HOH 38 B HOH 3 4 HOH HOH 39 B HOH 13 4 HOH HOH 40 B HOH 1 4 HOH HOH 38 C HOH 6 4 HOH HOH 39 C HOH 10 4 HOH HOH 40 C HOH 15 4 HOH HOH 41 C HOH 4 4 HOH HOH 455 A HOH 5 4 HOH HOH 456 A HOH 7 4 HOH HOH 457 A HOH 8 4 HOH HOH 458 A HOH 9 4 HOH HOH 459 A HOH 11 4 HOH HOH 460 A HOH 12 4 HOH HOH 461 A HOH 14 4 HOH HOH 462 A C 1 n 1 DC 1 B T 2 n 2 DT 2 B C 3 n 3 DC 3 B T 4 n 4 DT 4 B A 5 n 5 DA 5 B T 6 n 6 DT 6 B G 7 n 7 DG 7 B T 8 n 8 DT 8 B C 9 n 9 DC 9 B G 10 n 10 DG 10 B G 11 n 11 DG 11 B G 12 n 12 DG 12 B T 13 n 13 DT 13 B G 14 n 14 DG 14 B C 15 n 15 DC 15 B G 16 n 16 DG 16 B G 17 n 17 DG 17 B A 18 n 18 DA 18 B G 19 n 19 DG 19 B A 20 n 20 DA 20 B A 21 n 21 DA 21 B A 22 n 22 DA 22 B G 23 n 23 DG 23 B A 24 n 24 DA 24 B G 25 n 25 DG 25 B G 26 n 26 DG 26 B T 27 n 27 DT 27 B A 28 n 28 DA 28 B A 29 n 29 DA 29 B T 30 n 30 DT 30 B G 31 n 31 DG 31 B A 32 n 32 DA 32 B A 33 n 33 DA 33 B A 34 n 34 DA 34 B T 35 n 35 DT 35 B G 36 n 36 DG 36 B G 37 n 37 DG 37 B G 1 n 1 DG 1 C C 2 n 2 DC 2 C C 3 n 3 DC 3 C A 4 n 4 DA 4 C T 5 n 5 DT 5 C T 6 n 6 DT 6 C T 7 n 7 DT 7 C C 8 n 8 DC 8 C A 9 n 9 DA 9 C T 10 n 10 DT 10 C T 11 n 11 DT 11 C A 12 n 12 DA 12 C C 13 n 13 DC 13 C C 14 n 14 DC 14 C T 15 n 15 DT 15 C C 16 n 16 DC 16 C T 17 n 17 DT 17 C T 18 n 18 DT 18 C T 19 n 19 DT 19 C C 20 n 20 DC 20 C T 21 n 21 DT 21 C C 22 n 22 DC 22 C C 23 n 23 DC 23 C G 24 n 24 DG 24 C C 25 n 25 DC 25 C A 26 n 26 DA 26 C C 27 n 27 DC 27 C C 28 n 28 DC 28 C C 29 n 29 DC 29 C G 30 n 30 DG 30 C A 31 n 31 DA 31 C C 32 n 32 DC 32 C A 33 n 33 DA 33 C T 34 n 34 DT 34 C A 35 n 35 DA 35 C G 36 n 36 DG 36 C A 37 n 37 DA 37 C CYS 1 n 1 CYS 1 A PHE 2 n 2 PHE 2 A ALA 3 n 3 ALA 3 A LYS 4 n 4 LYS 4 A GLY 5 n 5 GLY 5 A THR 6 n 6 THR 6 A ASN 7 n 7 ASN 7 A VAL 8 n 8 VAL 8 A LEU 9 n 9 LEU 9 A MSE 10 n 10 MSE 10 A ALA 11 n 11 ALA 11 A ASP 12 n 12 ASP 12 A GLY 13 n 13 GLY 13 A SER 14 n 14 SER 14 A ILE 15 n 15 ILE 15 A GLU 16 n 16 GLU 16 A CYS 17 n 17 CYS 17 A ILE 18 n 18 ILE 18 A GLU 19 n 19 GLU 19 A ASN 20 n 20 ASN 20 A ILE 21 n 21 ILE 21 A GLU 22 n 22 GLU 22 A VAL 23 n 23 VAL 23 A GLY 24 n 24 GLY 24 A ASN 25 n 25 ASN 25 A LYS 26 n 26 LYS 26 A VAL 27 n 27 VAL 27 A MSE 28 n 28 MSE 28 A GLY 29 n 29 GLY 29 A LYS 30 n 30 LYS 30 A ASP 31 n 31 ASP 31 A GLY 32 n 32 GLY 32 A ARG 33 n 33 ARG 33 A PRO 34 n 34 PRO 34 A ARG 35 n 35 ARG 35 A GLU 36 n 36 GLU 36 A VAL 37 n 37 VAL 37 A ILE 38 n 38 ILE 38 A LYS 39 n 39 LYS 39 A LEU 40 n 40 LEU 40 A PRO 41 n 41 PRO 41 A ARG 42 n 42 ARG 42 A GLY 43 n 43 GLY 43 A ARG 44 n 44 ARG 44 A GLU 45 n 45 GLU 45 A THR 46 n 46 THR 46 A MSE 47 n 47 MSE 47 A TYR 48 n 48 TYR 48 A SER 49 n 49 SER 49 A VAL 50 n 50 VAL 50 A VAL 51 n 51 VAL 51 A GLN 52 n 52 GLN 52 A LYS 53 n 53 LYS 53 A SER 54 n 54 SER 54 A GLN 55 n 55 GLN 55 A HIS 56 n 56 HIS 56 A ARG 57 n 57 ARG 57 A ALA 58 n 58 ALA 58 A HIS 59 n 59 HIS 59 A LYS 60 n 60 LYS 60 A n 61 61 A n 62 62 A SER 63 n 63 SER 63 A SER 64 n 64 SER 64 A ARG 65 n 65 ARG 65 A GLU 66 n 66 GLU 66 A VAL 67 n 67 VAL 67 A PRO 68 n 68 PRO 68 A GLU 69 n 69 GLU 69 A LEU 70 n 70 LEU 70 A LEU 71 n 71 LEU 71 A LYS 72 n 72 LYS 72 A PHE 73 n 73 PHE 73 A THR 74 n 74 THR 74 A CYS 75 n 75 CYS 75 A ASN 76 n 76 ASN 76 A ALA 77 n 77 ALA 77 A THR 78 n 78 THR 78 A HIS 79 n 79 HIS 79 A GLU 80 n 80 GLU 80 A LEU 81 n 81 LEU 81 A VAL 82 n 82 VAL 82 A VAL 83 n 83 VAL 83 A ARG 84 n 84 ARG 84 A THR 85 n 85 THR 85 A PRO 86 n 86 PRO 86 A ARG 87 n 87 ARG 87 A SER 88 n 88 SER 88 A VAL 89 n 89 VAL 89 A ARG 90 n 90 ARG 90 A ARG 91 n 91 ARG 91 A LEU 92 n 92 LEU 92 A SER 93 n 93 SER 93 A ARG 94 n 94 ARG 94 A THR 95 n 95 THR 95 A ILE 96 n 96 ILE 96 A LYS 97 n 97 LYS 97 A GLY 98 n 98 GLY 98 A VAL 99 n 99 VAL 99 A GLU 100 n 100 GLU 100 A TYR 101 n 101 TYR 101 A PHE 102 n 102 PHE 102 A GLU 103 n 103 GLU 103 A VAL 104 n 104 VAL 104 A ILE 105 n 105 ILE 105 A THR 106 n 106 THR 106 A PHE 107 n 107 PHE 107 A GLU 108 n 108 GLU 108 A MSE 109 n 109 MSE 109 A GLY 110 n 110 GLY 110 A GLN 111 n 111 GLN 111 A LYS 112 n 112 LYS 112 A LYS 113 n 113 LYS 113 A ALA 114 n 114 ALA 114 A PRO 115 n 115 PRO 115 A ASP 116 n 116 ASP 116 A GLY 117 n 117 GLY 117 A ARG 118 n 118 ARG 118 A ILE 119 n 119 ILE 119 A VAL 120 n 120 VAL 120 A GLU 121 n 121 GLU 121 A LEU 122 n 122 LEU 122 A VAL 123 n 123 VAL 123 A LYS 124 n 124 LYS 124 A GLU 125 n 125 GLU 125 A VAL 126 n 126 VAL 126 A SER 127 n 127 SER 127 A LYS 128 n 128 LYS 128 A SER 129 n 129 SER 129 A TYR 130 n 130 TYR 130 A PRO 131 n 131 PRO 131 A ILE 132 n 132 ILE 132 A SER 133 n 133 SER 133 A GLU 134 n 134 GLU 134 A GLY 135 n 135 GLY 135 A PRO 136 n 136 PRO 136 A GLU 137 n 137 GLU 137 A ARG 138 n 138 ARG 138 A ALA 139 n 139 ALA 139 A ASN 140 n 140 ASN 140 A GLU 141 n 141 GLU 141 A LEU 142 n 142 LEU 142 A VAL 143 n 143 VAL 143 A GLU 144 n 144 GLU 144 A SER 145 n 145 SER 145 A TYR 146 n 146 TYR 146 A ARG 147 n 147 ARG 147 A LYS 148 n 148 LYS 148 A ALA 149 n 149 ALA 149 A SER 150 n 150 SER 150 A ASN 151 n 151 ASN 151 A LYS 152 n 152 LYS 152 A ALA 153 n 153 ALA 153 A TYR 154 n 154 TYR 154 A PHE 155 n 155 PHE 155 A GLU 156 n 156 GLU 156 A TRP 157 n 157 TRP 157 A THR 158 n 158 THR 158 A ILE 159 n 159 ILE 159 A GLU 160 n 160 GLU 160 A ALA 161 n 161 ALA 161 A ARG 162 n 162 ARG 162 A ASP 163 n 163 ASP 163 A LEU 164 n 164 LEU 164 A SER 165 n 165 SER 165 A LEU 166 n 166 LEU 166 A LEU 167 n 167 LEU 167 A GLY 168 n 168 GLY 168 A SER 169 n 169 SER 169 A HIS 170 n 170 HIS 170 A VAL 171 n 171 VAL 171 A ARG 172 n 172 ARG 172 A LYS 173 n 173 LYS 173 A ALA 174 n 174 ALA 174 A THR 175 n 175 THR 175 A TYR 176 n 176 TYR 176 A GLN 177 n 177 GLN 177 A THR 178 n 178 THR 178 A TYR 179 n 179 TYR 179 A ALA 180 n 180 ALA 180 A PRO 181 n 181 PRO 181 A ILE 182 n 182 ILE 182 A LEU 183 n 183 LEU 183 A TYR 184 n 184 TYR 184 A GLU 185 n 185 GLU 185 A ASN 186 n 186 ASN 186 A ASP 187 n 187 ASP 187 A HIS 188 n 188 HIS 188 A PHE 189 n 189 PHE 189 A PHE 190 n 190 PHE 190 A ASP 191 n 191 ASP 191 A TYR 192 n 192 TYR 192 A MSE 193 n 193 MSE 193 A GLN 194 n 194 GLN 194 A LYS 195 n 195 LYS 195 A SER 196 n 196 SER 196 A LYS 197 n 197 LYS 197 A PHE 198 n 198 PHE 198 A HIS 199 n 199 HIS 199 A LEU 200 n 200 LEU 200 A THR 201 n 201 THR 201 A ILE 202 n 202 ILE 202 A GLU 203 n 203 GLU 203 A GLY 204 n 204 GLY 204 A PRO 205 n 205 PRO 205 A LYS 206 n 206 LYS 206 A VAL 207 n 207 VAL 207 A LEU 208 n 208 LEU 208 A ALA 209 n 209 ALA 209 A TYR 210 n 210 TYR 210 A LEU 211 n 211 LEU 211 A LEU 212 n 212 LEU 212 A GLY 213 n 213 GLY 213 A LEU 214 n 214 LEU 214 A TRP 215 n 215 TRP 215 A ILE 216 n 216 ILE 216 A GLY 217 n 217 GLY 217 A ASP 218 n 218 ASP 218 A GLY 219 n 219 GLY 219 A LEU 220 n 220 LEU 220 A SER 221 n 221 SER 221 A ASP 222 n 222 ASP 222 A ARG 223 n 223 ARG 223 A ALA 224 n 224 ALA 224 A THR 225 n 225 THR 225 A PHE 226 n 226 PHE 226 A SER 227 n 227 SER 227 A VAL 228 n 228 VAL 228 A ASP 229 n 229 ASP 229 A SER 230 n 230 SER 230 A ARG 231 n 231 ARG 231 A ASP 232 n 232 ASP 232 A THR 233 n 233 THR 233 A SER 234 n 234 SER 234 A LEU 235 n 235 LEU 235 A MSE 236 n 236 MSE 236 A GLU 237 n 237 GLU 237 A ARG 238 n 238 ARG 238 A VAL 239 n 239 VAL 239 A THR 240 n 240 THR 240 A GLU 241 n 241 GLU 241 A TYR 242 n 242 TYR 242 A ALA 243 n 243 ALA 243 A GLU 244 n 244 GLU 244 A LYS 245 n 245 LYS 245 A LEU 246 n 246 LEU 246 A ASN 247 n 247 ASN 247 A LEU 248 n 248 LEU 248 A CYS 249 n 249 CYS 249 A ALA 250 n 250 ALA 250 A GLU 251 n 251 GLU 251 A TYR 252 n 252 TYR 252 A LYS 253 n 253 LYS 253 A ASP 254 n 254 ASP 254 A ARG 255 n 255 ARG 255 A LYS 256 n 256 LYS 256 A n 257 257 A n 258 258 A n 259 259 A n 260 260 A ALA 261 n 261 ALA 261 A LYS 262 n 262 LYS 262 A THR 263 n 263 THR 263 A VAL 264 n 264 VAL 264 A ASN 265 n 265 ASN 265 A LEU 266 n 266 LEU 266 A TYR 267 n 267 TYR 267 A SER 268 n 268 SER 268 A LYS 269 n 269 LYS 269 A VAL 270 n 270 VAL 270 A VAL 271 n 271 VAL 271 A ARG 272 n 272 ARG 272 A GLY 273 n 273 GLY 273 A ASN 274 n 274 ASN 274 A GLY 275 n 275 GLY 275 A ILE 276 n 276 ILE 276 A ARG 277 n 277 ARG 277 A ASN 278 n 278 ASN 278 A ASN 279 n 279 ASN 279 A LEU 280 n 280 LEU 280 A ASN 281 n 281 ASN 281 A THR 282 n 282 THR 282 A GLU 283 n 283 GLU 283 A ASN 284 n 284 ASN 284 A PRO 285 n 285 PRO 285 A LEU 286 n 286 LEU 286 A TRP 287 n 287 TRP 287 A ASP 288 n 288 ASP 288 A ALA 289 n 289 ALA 289 A ILE 290 n 290 ILE 290 A VAL 291 n 291 VAL 291 A GLY 292 n 292 GLY 292 A LEU 293 n 293 LEU 293 A GLY 294 n 294 GLY 294 A PHE 295 n 295 PHE 295 A LEU 296 n 296 LEU 296 A LYS 297 n 297 LYS 297 A ASP 298 n 298 ASP 298 A GLY 299 n 299 GLY 299 A VAL 300 n 300 VAL 300 A LYS 301 n 301 LYS 301 A ASN 302 n 302 ASN 302 A ILE 303 n 303 ILE 303 A PRO 304 n 304 PRO 304 A SER 305 n 305 SER 305 A PHE 306 n 306 PHE 306 A LEU 307 n 307 LEU 307 A SER 308 n 308 SER 308 A THR 309 n 309 THR 309 A ASP 310 n 310 ASP 310 A ASN 311 n 311 ASN 311 A ILE 312 n 312 ILE 312 A GLY 313 n 313 GLY 313 A THR 314 n 314 THR 314 A ARG 315 n 315 ARG 315 A GLU 316 n 316 GLU 316 A THR 317 n 317 THR 317 A PHE 318 n 318 PHE 318 A LEU 319 n 319 LEU 319 A ALA 320 n 320 ALA 320 A GLY 321 n 321 GLY 321 A LEU 322 n 322 LEU 322 A ILE 323 n 323 ILE 323 A ASP 324 n 324 ASP 324 A SER 325 n 325 SER 325 A ASP 326 n 326 ASP 326 A GLY 327 n 327 GLY 327 A TYR 328 n 328 TYR 328 A VAL 329 n 329 VAL 329 A THR 330 n 330 THR 330 A ASP 331 n 331 ASP 331 A GLU 332 n 332 GLU 332 A HIS 333 n 333 HIS 333 A GLY 334 n 334 GLY 334 A ILE 335 n 335 ILE 335 A LYS 336 n 336 LYS 336 A ALA 337 n 337 ALA 337 A THR 338 n 338 THR 338 A ILE 339 n 339 ILE 339 A LYS 340 n 340 LYS 340 A THR 341 n 341 THR 341 A ILE 342 n 342 ILE 342 A HIS 343 n 343 HIS 343 A THR 344 n 344 THR 344 A SER 345 n 345 SER 345 A VAL 346 n 346 VAL 346 A ARG 347 n 347 ARG 347 A ASP 348 n 348 ASP 348 A GLY 349 n 349 GLY 349 A LEU 350 n 350 LEU 350 A VAL 351 n 351 VAL 351 A SER 352 n 352 SER 352 A LEU 353 n 353 LEU 353 A ALA 354 n 354 ALA 354 A ARG 355 n 355 ARG 355 A SER 356 n 356 SER 356 A LEU 357 n 357 LEU 357 A GLY 358 n 358 GLY 358 A LEU 359 n 359 LEU 359 A VAL 360 n 360 VAL 360 A VAL 361 n 361 VAL 361 A SER 362 n 362 SER 362 A VAL 363 n 363 VAL 363 A ASN 364 n 364 ASN 364 A ALA 365 n 365 ALA 365 A GLU 366 n 366 GLU 366 A PRO 367 n 367 PRO 367 A ALA 368 n 368 ALA 368 A LYS 369 n 369 LYS 369 A VAL 370 n 370 VAL 370 A ASP 371 n 371 ASP 371 A MSE 372 n 372 MSE 372 A ASN 373 n 373 ASN 373 A GLY 374 n 374 GLY 374 A THR 375 n 375 THR 375 A LYS 376 n 376 LYS 376 A HIS 377 n 377 HIS 377 A LYS 378 n 378 LYS 378 A ILE 379 n 379 ILE 379 A SER 380 n 380 SER 380 A TYR 381 n 381 TYR 381 A ALA 382 n 382 ALA 382 A ILE 383 n 383 ILE 383 A TYR 384 n 384 TYR 384 A MSE 385 n 385 MSE 385 A SER 386 n 386 SER 386 A GLY 387 n 387 GLY 387 A GLY 388 n 388 GLY 388 A ASP 389 n 389 ASP 389 A VAL 390 n 390 VAL 390 A LEU 391 n 391 LEU 391 A LEU 392 n 392 LEU 392 A ASN 393 n 393 ASN 393 A VAL 394 n 394 VAL 394 A LEU 395 n 395 LEU 395 A SER 396 n 396 SER 396 A LYS 397 n 397 LYS 397 A CYS 398 n 398 CYS 398 A ALA 399 n 399 ALA 399 A GLY 400 n 400 GLY 400 A SER 401 n 401 SER 401 A LYS 402 n 402 LYS 402 A LYS 403 n 403 LYS 403 A PHE 404 n 404 PHE 404 A ARG 405 n 405 ARG 405 A PRO 406 n 406 PRO 406 A ALA 407 n 407 ALA 407 A PRO 408 n 408 PRO 408 A ALA 409 n 409 ALA 409 A ALA 410 n 410 ALA 410 A ALA 411 n 411 ALA 411 A PHE 412 n 412 PHE 412 A ALA 413 n 413 ALA 413 A ARG 414 n 414 ARG 414 A GLU 415 n 415 GLU 415 A CYS 416 n 416 CYS 416 A ARG 417 n 417 ARG 417 A GLY 418 n 418 GLY 418 A PHE 419 n 419 PHE 419 A TYR 420 n 420 TYR 420 A PHE 421 n 421 PHE 421 A GLU 422 n 422 GLU 422 A LEU 423 n 423 LEU 423 A GLN 424 n 424 GLN 424 A GLU 425 n 425 GLU 425 A LEU 426 n 426 LEU 426 A LYS 427 n 427 LYS 427 A GLU 428 n 428 GLU 428 A ASP 429 n 429 ASP 429 A ASP 430 n 430 ASP 430 A TYR 431 n 431 TYR 431 A TYR 432 n 432 TYR 432 A GLY 433 n 433 GLY 433 A ILE 434 n 434 ILE 434 A THR 435 n 435 THR 435 A LEU 436 n 436 LEU 436 A SER 437 n 437 SER 437 A ASP 438 n 438 ASP 438 A ASP 439 n 439 ASP 439 A SER 440 n 440 SER 440 A ASP 441 n 441 ASP 441 A HIS 442 n 442 HIS 442 A GLN 443 n 443 GLN 443 A PHE 444 n 444 PHE 444 A LEU 445 n 445 LEU 445 A LEU 446 n 446 LEU 446 A ALA 447 n 447 ALA 447 A ASN 448 n 448 ASN 448 A GLN 449 n 449 GLN 449 A VAL 450 n 450 VAL 450 A VAL 451 n 451 VAL 451 A VAL 452 n 452 VAL 452 A HIS 453 n 453 HIS 453 A ASN 454 n 454 ASN 454 A author_defined_assembly 3 trimeric A MSE 10 SELENOMETHIONINE C MSE 10 MET A MSE 28 SELENOMETHIONINE C MSE 28 MET A MSE 47 SELENOMETHIONINE C MSE 47 MET A MSE 109 SELENOMETHIONINE C MSE 109 MET A MSE 193 SELENOMETHIONINE C MSE 193 MET A MSE 236 SELENOMETHIONINE C MSE 236 MET A MSE 372 SELENOMETHIONINE C MSE 372 MET A MSE 385 SELENOMETHIONINE C MSE 385 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 2 C N PHE 2 A O TYR 432 C O TYR 432 A O TYR 431 C O TYR 431 A N GLY 43 C N GLY 43 A N VAL 8 C N VAL 8 A O GLU 16 C O GLU 16 A N VAL 27 C N VAL 27 A O ARG 35 C O ARG 35 A N LYS 39 C N LYS 39 A O THR 435 C O THR 435 A O CYS 75 C O CYS 75 A N TYR 48 C N TYR 48 A N SER 49 C N SER 49 A O GLN 424 C O GLN 424 A O PHE 419 C O PHE 419 A N GLN 177 C N GLN 177 A O TYR 176 C O TYR 176 A N ARG 84 C N ARG 84 A N THR 85 C N THR 85 A O PHE 155 C O PHE 155 A O PHE 419 C O PHE 419 A N GLN 177 C N GLN 177 A O TYR 176 C O TYR 176 A N ARG 84 C N ARG 84 A N LEU 81 C N LEU 81 A O ILE 159 C O ILE 159 A O VAL 126 C O VAL 126 A N THR 106 C N THR 106 A O GLU 103 C O GLU 103 A N LEU 92 C N LEU 92 A O VAL 126 C O VAL 126 A N THR 106 C N THR 106 A N PHE 102 C N PHE 102 A O TYR 130 C O TYR 130 A N LEU 220 C N LEU 220 A O THR 225 C O THR 225 A N VAL 228 C N VAL 228 A O LYS 262 C O LYS 262 A O TYR 267 C O TYR 267 A N CYS 249 C N CYS 249 A N LYS 297 C N LYS 297 A O VAL 300 C O VAL 300 A N TYR 328 C N TYR 328 A O THR 338 C O THR 338 A N THR 341 C N THR 341 A O TYR 381 C O TYR 381 A O TYR 384 C O TYR 384 A N SER 362 C N SER 362 A N TYR 328 C N TYR 328 A O THR 338 C O THR 338 A N THR 341 C N THR 341 A O TYR 381 C O TYR 381 A O SER 380 C O SER 380 A N GLU 366 C N GLU 366 A N PHE 444 C N PHE 444 A O VAL 452 C O VAL 452 1 A SER 61 C SER 61 1 Y 1 A ASP 62 C ASP 62 1 Y 1 A GLU 257 C GLU 257 1 Y 1 A PRO 258 C PRO 258 1 Y 1 A GLN 259 C GLN 259 1 Y 1 A VAL 260 C VAL 260 1 Y 1 A TYR 179 0.070 SIDE CHAIN 1 2.37 0.30 108.30 110.67 B B B O4' C1' N1 DT DT DT 8 8 8 N 1 2.89 0.30 108.30 111.19 B B B O4' C1' N1 DC DC DC 15 15 15 N 1 1.86 0.30 108.30 110.16 C C C O4' C1' N1 DT DT DT 34 34 34 N 1 20.03 2.70 111.00 131.03 A A A N CA C LYS LYS LYS 60 60 60 N 1 -16.26 2.50 113.10 96.84 A A A N CA C GLY GLY GLY 273 273 273 N 1 A A CB OG SER SER 165 165 -0.086 0.013 1.418 1.332 N 1 A LEU 40 -110.36 53.36 1 A VAL 51 -174.47 120.00 1 A SER 54 177.89 154.35 1 A GLN 55 -58.11 2.74 1 A ARG 57 -154.74 -31.52 1 A ALA 58 -35.26 36.72 1 A SER 64 -75.56 22.92 1 A GLU 66 -32.60 143.30 1 A PRO 68 -44.64 167.41 1 A PHE 73 179.04 172.70 1 A ARG 118 -48.34 161.06 1 A PRO 136 -45.78 -2.47 1 A SER 145 -58.73 1.21 1 A LYS 148 -105.90 61.88 1 A ALA 174 -77.56 30.05 1 A ASP 187 -148.28 22.38 1 A LYS 195 -62.78 2.64 1 A ILE 202 -87.41 30.36 1 A PRO 205 -38.01 -35.81 1 A SER 230 -38.29 -18.63 1 A ASN 247 71.71 61.67 1 A ARG 255 -23.73 104.05 1 A VAL 270 -67.25 -147.44 1 A ARG 277 -166.21 58.41 1 A ASN 278 -48.40 171.29 1 A LEU 280 -136.28 -40.70 1 A LEU 286 -44.45 -70.56 1 A ILE 290 -33.68 -39.89 1 A LYS 301 -58.95 176.14 1 A ASN 302 175.83 142.79 1 A ASP 310 -87.15 -157.75 1 A GLU 316 -61.54 -70.21 1 A ASP 324 -44.24 -17.42 1 A SER 325 -107.74 -65.38 1 A ASP 326 -105.89 55.56 1 A ASP 331 -146.34 -9.62 1 A ASP 348 -42.78 -81.13 1 A PRO 367 -46.82 169.03 1 A ASP 371 -134.29 -150.29 1 A ALA 382 -114.15 78.30 1 A ASP 389 -28.36 -65.80 1 A PHE 404 -38.72 144.70 1 A PRO 408 -48.45 154.61 1 A ALA 409 -30.70 -76.08 1 A ALA 410 170.14 161.44 1 A ALA 411 33.84 48.74 1 A ARG 414 -102.85 62.32 1 A GLU 428 -42.14 151.68 1 A ASP 439 -52.33 -2.74 PROTEIN_REP.PARAM PROTEIN.TOP DNA-RNA_REP.PARAM DNA-RNA.TOP WATER.PARAM WATER.TOP 36.7 9.535 -25.273 15.737 0.0 0.00 0.0 BULK SOLVENT MODEL USED 0.2870000 0.012 0.2420000 0.2480000 3.20 24.49 546 11779 11597 4.5 82.4 RANDOM 1 isotropic THROUGHOUT 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1LWS FLAT MODEL 10 0.18428 0.53 0.59 3.20 24.49 15 5065 0 1511 3539 0.011 1.8 23.5 1.24 1.59 1.50 2.80 2.00 1.79 2.00 2.79 2.50 0.3530000 0.40 0.3010000 3.35 54 1639 6 4.1 71.3 3.2 30.0 1LWT 12363 12363 -3 0.0820000 0.0820000 1 11.9 3.9 83.6 0.1930000 3.2 3.3 999 0.1930000 69.8 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS ENDONUCLEASE PI-SCEI/DNA Complex Crystal structure of the intein homing endonuclease PI-SceI bound to its substrate DNA (Ca2+ free) 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N A GLU 19 C GLU 19 HELX_P A ILE 21 C ILE 21 5 1 3 A SER 133 C SER 133 HELX_P A GLY 135 C GLY 135 5 2 3 A PRO 136 C PRO 136 HELX_P A LYS 148 C LYS 148 1 3 13 A ARG 162 C ARG 162 HELX_P A LEU 167 C LEU 167 5 4 6 A GLY 168 C GLY 168 HELX_P A ALA 174 C ALA 174 1 5 7 A ASP 187 C ASP 187 HELX_P A LYS 195 C LYS 195 1 6 9 A GLU 203 C GLU 203 HELX_P A ASP 218 C ASP 218 1 7 16 A ASP 232 C ASP 232 HELX_P A LEU 246 C LEU 246 1 8 15 A ASN 284 C ASN 284 HELX_P A LEU 293 C LEU 293 1 9 10 A PRO 304 C PRO 304 HELX_P A THR 309 C THR 309 5 10 6 A ASN 311 C ASN 311 HELX_P A GLY 327 C GLY 327 1 11 17 A HIS 343 C HIS 343 HELX_P A LEU 357 C LEU 357 1 12 15 A GLY 388 C GLY 388 HELX_P A SER 396 C SER 396 1 13 9 covale 1.330 A LEU 9 C C LEU 9 1_555 A MSE 10 C N MSE 10 1_555 covale 1.326 A MSE 10 C C MSE 10 1_555 A ALA 11 C N ALA 11 1_555 covale 1.324 A VAL 27 C C VAL 27 1_555 A MSE 28 C N MSE 28 1_555 covale 1.330 A MSE 28 C C MSE 28 1_555 A GLY 29 C N GLY 29 1_555 covale 1.328 A THR 46 C C THR 46 1_555 A MSE 47 C N MSE 47 1_555 covale 1.329 A MSE 47 C C MSE 47 1_555 A TYR 48 C N TYR 48 1_555 covale 1.317 A GLU 108 C C GLU 108 1_555 A MSE 109 C N MSE 109 1_555 covale 1.317 A MSE 109 C C MSE 109 1_555 A GLY 110 C N GLY 110 1_555 covale 1.328 A TYR 192 C C TYR 192 1_555 A MSE 193 C N MSE 193 1_555 covale 1.323 A MSE 193 C C MSE 193 1_555 A GLN 194 C N GLN 194 1_555 covale 1.320 A LEU 235 C C LEU 235 1_555 A MSE 236 C N MSE 236 1_555 covale 1.325 A MSE 236 C C MSE 236 1_555 A GLU 237 C N GLU 237 1_555 covale 1.326 A ASP 371 C C ASP 371 1_555 A MSE 372 C N MSE 372 1_555 covale 1.322 A MSE 372 C C MSE 372 1_555 A ASN 373 C N ASN 373 1_555 covale 1.333 A TYR 384 C C TYR 384 1_555 A MSE 385 C N MSE 385 1_555 covale 1.325 A MSE 385 C C MSE 385 1_555 A SER 386 C N SER 386 1_555 hydrog WATSON-CRICK B DT 2 A N3 DT 2 1_555 C DA 37 B N1 DA 37 1_555 hydrog WATSON-CRICK B DT 2 A O4 DT 2 1_555 C DA 37 B N6 DA 37 1_555 hydrog WATSON-CRICK B DC 3 A N3 DC 3 1_555 C DG 36 B N1 DG 36 1_555 hydrog WATSON-CRICK B DC 3 A N4 DC 3 1_555 C DG 36 B O6 DG 36 1_555 hydrog WATSON-CRICK B DC 3 A O2 DC 3 1_555 C DG 36 B N2 DG 36 1_555 hydrog WATSON-CRICK B DT 4 A N3 DT 4 1_555 C DA 35 B N1 DA 35 1_555 hydrog WATSON-CRICK B DT 4 A O4 DT 4 1_555 C DA 35 B N6 DA 35 1_555 hydrog WATSON-CRICK B DA 5 A N1 DA 5 1_555 C DT 34 B N3 DT 34 1_555 hydrog WATSON-CRICK B DA 5 A N6 DA 5 1_555 C DT 34 B O4 DT 34 1_555 hydrog WATSON-CRICK B DT 6 A N3 DT 6 1_555 C DA 33 B N1 DA 33 1_555 hydrog WATSON-CRICK B DT 6 A O4 DT 6 1_555 C DA 33 B N6 DA 33 1_555 hydrog WATSON-CRICK B DG 7 A N1 DG 7 1_555 C DC 32 B N3 DC 32 1_555 hydrog WATSON-CRICK B DG 7 A N2 DG 7 1_555 C DC 32 B O2 DC 32 1_555 hydrog WATSON-CRICK B DG 7 A O6 DG 7 1_555 C DC 32 B N4 DC 32 1_555 hydrog WATSON-CRICK B DT 8 A N3 DT 8 1_555 C DA 31 B N1 DA 31 1_555 hydrog WATSON-CRICK B DT 8 A O4 DT 8 1_555 C DA 31 B N6 DA 31 1_555 hydrog WATSON-CRICK B DC 9 A N3 DC 9 1_555 C DG 30 B N1 DG 30 1_555 hydrog WATSON-CRICK B DC 9 A N4 DC 9 1_555 C DG 30 B O6 DG 30 1_555 hydrog WATSON-CRICK B DC 9 A O2 DC 9 1_555 C DG 30 B N2 DG 30 1_555 hydrog WATSON-CRICK B DG 10 A N1 DG 10 1_555 C DC 29 B N3 DC 29 1_555 hydrog WATSON-CRICK B DG 10 A N2 DG 10 1_555 C DC 29 B O2 DC 29 1_555 hydrog WATSON-CRICK B DG 10 A O6 DG 10 1_555 C DC 29 B N4 DC 29 1_555 hydrog WATSON-CRICK B DG 11 A N1 DG 11 1_555 C DC 28 B N3 DC 28 1_555 hydrog WATSON-CRICK B DG 11 A N2 DG 11 1_555 C DC 28 B O2 DC 28 1_555 hydrog WATSON-CRICK B DG 11 A O6 DG 11 1_555 C DC 28 B N4 DC 28 1_555 hydrog WATSON-CRICK B DG 12 A N1 DG 12 1_555 C DC 27 B N3 DC 27 1_555 hydrog WATSON-CRICK B DG 12 A N2 DG 12 1_555 C DC 27 B O2 DC 27 1_555 hydrog WATSON-CRICK B DG 12 A O6 DG 12 1_555 C DC 27 B N4 DC 27 1_555 hydrog WATSON-CRICK B DT 13 A N3 DT 13 1_555 C DA 26 B N1 DA 26 1_555 hydrog WATSON-CRICK B DT 13 A O4 DT 13 1_555 C DA 26 B N6 DA 26 1_555 hydrog WATSON-CRICK B DG 14 A N1 DG 14 1_555 C DC 25 B N3 DC 25 1_555 hydrog WATSON-CRICK B DG 14 A N2 DG 14 1_555 C DC 25 B O2 DC 25 1_555 hydrog WATSON-CRICK B DG 14 A O6 DG 14 1_555 C DC 25 B N4 DC 25 1_555 hydrog WATSON-CRICK B DC 15 A N3 DC 15 1_555 C DG 24 B N1 DG 24 1_555 hydrog WATSON-CRICK B DC 15 A N4 DC 15 1_555 C DG 24 B O6 DG 24 1_555 hydrog WATSON-CRICK B DC 15 A O2 DC 15 1_555 C DG 24 B N2 DG 24 1_555 hydrog WATSON-CRICK B DG 16 A N1 DG 16 1_555 C DC 23 B N3 DC 23 1_555 hydrog WATSON-CRICK B DG 16 A N2 DG 16 1_555 C DC 23 B O2 DC 23 1_555 hydrog WATSON-CRICK B DG 16 A O6 DG 16 1_555 C DC 23 B N4 DC 23 1_555 hydrog WATSON-CRICK B DG 17 A N1 DG 17 1_555 C DC 22 B N3 DC 22 1_555 hydrog WATSON-CRICK B DG 17 A N2 DG 17 1_555 C DC 22 B O2 DC 22 1_555 hydrog WATSON-CRICK B DG 17 A O6 DG 17 1_555 C DC 22 B N4 DC 22 1_555 hydrog WATSON-CRICK B DA 18 A N1 DA 18 1_555 C DT 21 B N3 DT 21 1_555 hydrog WATSON-CRICK B DA 18 A N6 DA 18 1_555 C DT 21 B O4 DT 21 1_555 hydrog WATSON-CRICK B DG 19 A N1 DG 19 1_555 C DC 20 B N3 DC 20 1_555 hydrog WATSON-CRICK B DG 19 A N2 DG 19 1_555 C DC 20 B O2 DC 20 1_555 hydrog WATSON-CRICK B DG 19 A O6 DG 19 1_555 C DC 20 B N4 DC 20 1_555 hydrog WATSON-CRICK B DA 20 A N1 DA 20 1_555 C DT 19 B N3 DT 19 1_555 hydrog WATSON-CRICK B DA 20 A N6 DA 20 1_555 C DT 19 B O4 DT 19 1_555 hydrog WATSON-CRICK B DA 21 A N1 DA 21 1_555 C DT 18 B N3 DT 18 1_555 hydrog WATSON-CRICK B DA 21 A N6 DA 21 1_555 C DT 18 B O4 DT 18 1_555 hydrog WATSON-CRICK B DA 22 A N1 DA 22 1_555 C DT 17 B N3 DT 17 1_555 hydrog WATSON-CRICK B DA 22 A N6 DA 22 1_555 C DT 17 B O4 DT 17 1_555 hydrog WATSON-CRICK B DG 23 A N1 DG 23 1_555 C DC 16 B N3 DC 16 1_555 hydrog WATSON-CRICK B DG 23 A N2 DG 23 1_555 C DC 16 B O2 DC 16 1_555 hydrog WATSON-CRICK B DG 23 A O6 DG 23 1_555 C DC 16 B N4 DC 16 1_555 hydrog WATSON-CRICK B DA 24 A N1 DA 24 1_555 C DT 15 B N3 DT 15 1_555 hydrog WATSON-CRICK B DA 24 A N6 DA 24 1_555 C DT 15 B O4 DT 15 1_555 hydrog WATSON-CRICK B DG 25 A N1 DG 25 1_555 C DC 14 B N3 DC 14 1_555 hydrog WATSON-CRICK B DG 25 A N2 DG 25 1_555 C DC 14 B O2 DC 14 1_555 hydrog WATSON-CRICK B DG 25 A O6 DG 25 1_555 C DC 14 B N4 DC 14 1_555 hydrog WATSON-CRICK B DG 26 A N1 DG 26 1_555 C DC 13 B N3 DC 13 1_555 hydrog WATSON-CRICK B DG 26 A N2 DG 26 1_555 C DC 13 B O2 DC 13 1_555 hydrog WATSON-CRICK B DG 26 A O6 DG 26 1_555 C DC 13 B N4 DC 13 1_555 hydrog WATSON-CRICK B DT 27 A N3 DT 27 1_555 C DA 12 B N1 DA 12 1_555 hydrog WATSON-CRICK B DT 27 A O4 DT 27 1_555 C DA 12 B N6 DA 12 1_555 hydrog WATSON-CRICK B DA 28 A N1 DA 28 1_555 C DT 11 B N3 DT 11 1_555 hydrog WATSON-CRICK B DA 28 A N6 DA 28 1_555 C DT 11 B O4 DT 11 1_555 hydrog WATSON-CRICK B DA 29 A N1 DA 29 1_555 C DT 10 B N3 DT 10 1_555 hydrog WATSON-CRICK B DA 29 A N6 DA 29 1_555 C DT 10 B O4 DT 10 1_555 hydrog WATSON-CRICK B DT 30 A N3 DT 30 1_555 C DA 9 B N1 DA 9 1_555 hydrog WATSON-CRICK B DT 30 A O4 DT 30 1_555 C DA 9 B N6 DA 9 1_555 hydrog WATSON-CRICK B DG 31 A N1 DG 31 1_555 C DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK B DG 31 A N2 DG 31 1_555 C DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK B DG 31 A O6 DG 31 1_555 C DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK B DA 32 A N1 DA 32 1_555 C DT 7 B N3 DT 7 1_555 hydrog WATSON-CRICK B DA 32 A N6 DA 32 1_555 C DT 7 B O4 DT 7 1_555 hydrog WATSON-CRICK B DA 33 A N1 DA 33 1_555 C DT 6 B N3 DT 6 1_555 hydrog WATSON-CRICK B DA 33 A N6 DA 33 1_555 C DT 6 B O4 DT 6 1_555 hydrog WATSON-CRICK B DA 34 A N1 DA 34 1_555 C DT 5 B N3 DT 5 1_555 hydrog WATSON-CRICK B DA 34 A N6 DA 34 1_555 C DT 5 B O4 DT 5 1_555 hydrog WATSON-CRICK B DT 35 A N3 DT 35 1_555 C DA 4 B N1 DA 4 1_555 hydrog WATSON-CRICK B DT 35 A O4 DT 35 1_555 C DA 4 B N6 DA 4 1_555 hydrog WATSON-CRICK B DG 36 A N1 DG 36 1_555 C DC 3 B N3 DC 3 1_555 hydrog WATSON-CRICK B DG 36 A N2 DG 36 1_555 C DC 3 B O2 DC 3 1_555 hydrog WATSON-CRICK B DG 36 A O6 DG 36 1_555 C DC 3 B N4 DC 3 1_555 hydrog WATSON-CRICK B DG 37 A N1 DG 37 1_555 C DC 2 B N3 DC 2 1_555 hydrog WATSON-CRICK B DG 37 A N2 DG 37 1_555 C DC 2 B O2 DC 2 1_555 hydrog WATSON-CRICK B DG 37 A O6 DG 37 1_555 C DC 2 B N4 DC 2 1_555 HYDROLASE/DNA HOMING ENDONUCLEASE, PROTEIN-DNA COMPLEX, INTEIN, ENDONUCLEASE, HYDROLASE-DNA COMPLEX VATA_YEAST UNP 3 284 P17255 CFAKGTNVLMADGSIECIENIEVGNKVMGKDGRPREVIKLPRGRETMYSVVQKSQHRAHKSDSSREVPELLKFTCNATHE LVVRTPRSVRRLSRTIKGVEYFEVITFEMGQKKAPDGRIVELVKEVSKSYPISEGPERANELVESYRKASNKAYFEWTIE ARDLSLLGSHVRKATYQTYAPILYENDHFFDYMQKSKFHLTIEGPKVLAYLLGLWIGDGLSDRATFSVDSRDTSLMERVT EYAEKLNLCAEYKDRKEPQVAKTVNLYSKVVRGNGIRNNLNTENPLWDAIVGLGFLKDGVKNIPSFLSTDNIGTRETFLA GLIDSDGYVTDEHGIKATIKTIHTSVRDGLVSLARSLGLVVSVNAEPAKVDMNGTKHKISYAIYMSGGDVLLNVLSKCAG SKKFRPAPAAAFARECRGFYFELQELKEDDYYGITLSDDSDHQFLLANQVVVHN 1LWT PDB 1 1LWT 1LWT PDB 2 1LWT 284 737 1LWT 1 454 P17255 A 1 1 454 1 37 1LWT 1 37 1LWT B 2 1 37 1 37 1LWT 1 37 1LWT C 3 1 37 1 MET MODIFIED RESIDUE MSE 10 1LWT A P17255 UNP 293 10 1 MET MODIFIED RESIDUE MSE 28 1LWT A P17255 UNP 311 28 1 MET MODIFIED RESIDUE MSE 47 1LWT A P17255 UNP 330 47 1 MET MODIFIED RESIDUE MSE 109 1LWT A P17255 UNP 392 109 1 MET MODIFIED RESIDUE MSE 193 1LWT A P17255 UNP 476 193 1 MET MODIFIED RESIDUE MSE 236 1LWT A P17255 UNP 519 236 1 MET MODIFIED RESIDUE MSE 372 1LWT A P17255 UNP 655 372 1 MET MODIFIED RESIDUE MSE 385 1LWT A P17255 UNP 668 385 3 2 3 3 4 4 3 3 4 2 4 4 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 2 C PHE 2 A ALA 3 C ALA 3 A ASP 429 C ASP 429 A TYR 432 C TYR 432 A ARG 42 C ARG 42 A GLU 45 C GLU 45 A ASN 7 C ASN 7 A LEU 9 C LEU 9 A ILE 15 C ILE 15 A CYS 17 C CYS 17 A LYS 26 C LYS 26 A MSE 28 C MSE 28 A PRO 34 C PRO 34 A LYS 39 C LYS 39 A THR 435 C THR 435 A LEU 436 C LEU 436 A LYS 72 C LYS 72 A ASN 76 C ASN 76 A MSE 47 C MSE 47 A GLN 52 C GLN 52 A PHE 421 C PHE 421 A GLU 425 C GLU 425 A ARG 417 C ARG 417 A PHE 419 C PHE 419 A TYR 176 C TYR 176 A TYR 179 C TYR 179 A GLU 80 C GLU 80 A PRO 86 C PRO 86 A TYR 154 C TYR 154 A PHE 155 C PHE 155 A ARG 417 C ARG 417 A PHE 419 C PHE 419 A TYR 176 C TYR 176 A TYR 179 C TYR 179 A GLU 80 C GLU 80 A PRO 86 C PRO 86 A THR 158 C THR 158 A GLU 160 C GLU 160 A ILE 119 C ILE 119 A VAL 126 C VAL 126 A GLU 100 C GLU 100 A LYS 113 C LYS 113 A VAL 89 C VAL 89 A THR 95 C THR 95 A ILE 119 C ILE 119 A VAL 126 C VAL 126 A GLU 100 C GLU 100 A LYS 113 C LYS 113 A SER 129 C SER 129 A PRO 131 C PRO 131 A GLY 219 C GLY 219 A LEU 220 C LEU 220 A ARG 223 C ARG 223 A VAL 228 C VAL 228 A LYS 262 C LYS 262 A SER 268 C SER 268 A LEU 248 C LEU 248 A ALA 250 C ALA 250 A LEU 296 C LEU 296 A LYS 297 C LYS 297 A VAL 300 C VAL 300 A LYS 301 C LYS 301 A TYR 328 C TYR 328 A THR 330 C THR 330 A LYS 336 C LYS 336 A THR 341 C THR 341 A SER 380 C SER 380 A SER 386 C SER 386 A VAL 360 C VAL 360 A SER 362 C SER 362 A TYR 328 C TYR 328 A THR 330 C THR 330 A LYS 336 C LYS 336 A THR 341 C THR 341 A SER 380 C SER 380 A SER 386 C SER 386 A ALA 365 C ALA 365 A GLU 366 C GLU 366 A GLN 443 C GLN 443 A LEU 445 C LEU 445 A VAL 451 C VAL 451 A HIS 453 C HIS 453 19 P 21 21 21