0.036657 0.014513 0.014177 0.000000 0.033568 0.003749 0.000000 0.000000 0.031016 0.00000 0.00000 0.00000 Bon, C.I. Lehmann, M.S. Wilkinson, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 88.80 108.80 111.60 27.280 32.040 34.270 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking D2 O 20.028 DEUTERATED WATER non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer N O3 -1 62.005 NITRATE ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N D N 90 N D N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N C N 98 N O N 99 N N N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 N C N 132 N C N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 N C Y 145 N C Y 146 N N Y 147 N C Y 148 N C Y 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N O N 162 N H N 163 N H N 164 N N N 165 S C N 166 N C N 167 N O N 168 S C N 169 N C N 170 N C N 171 N C N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C N 191 N C N 192 N C N 193 N C N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C N 213 N C N 214 N C N 215 N C N 216 N N N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 S C N 235 N C N 236 N O N 237 N C N 238 N C N 239 N S N 240 N C N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N NA N 254 N N N 255 N O N 256 N O N 257 N O N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C N 303 N O N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 R C N 317 N O N 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N N Y 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N C N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing Y 142 N sing Y 143 N doub Y 144 N doub N 145 N sing Y 146 N sing N 147 N sing Y 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N doub N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing Y 253 N doub Y 254 N sing Y 255 N sing N 256 N sing Y 257 N doub N 258 N sing Y 259 N doub N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing Y 322 N doub Y 323 N sing Y 324 N sing N 325 N sing Y 326 N doub Y 327 N sing Y 328 N sing N 329 N sing Y 330 N sing Y 331 N doub N 332 N sing Y 333 N doub N 334 N sing Y 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing Y 350 N doub Y 351 N sing Y 352 N sing N 353 N sing Y 354 N doub N 355 N sing Y 356 N doub N 357 N sing Y 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 55 978 987 10.1107/S0907444998018514 10216294 Quasi-Laue neutron-diffraction study of the water arrangement in crystals of triclinic hen egg-white lysozyme. 1999 NE Physica B (AMSTERDAM) PHYBE3 1305 0921-4526 241 1122 1130 10.1016/S0921-4526(97)00808-9 Neutron Laue Diffraction in Macromolecular Crystallography 1998 10.2210/pdb1lzn/pdb pdb_00001lzn 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 295 1 IMAGE PLATE 1997-12 LAUE L neutron 1 2.7 1.0 3.5 1.0 2.7-3.5 NITRATE IONS PRESENT 14331.160 PROTEIN (LYSOZYME) 3.2.1.17 1 nat polymer 62.005 NITRATE ION 5 syn non-polymer 22.990 SODIUM ION 1 syn non-polymer 18.015 water 243 nat water no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chicken Gallus sample EGG CYTOPLASM (WHITE) 9031 Gallus gallus 3 1.82 31.82 EXCHANGEABLE HYDROGENS (LABIL HYDROGENS+HYDROGENS WITHIN THE SOLVENT) WERE REPLACED BY DEUTERIUM. SITES OF EXCHANGEABLE HYDROGEN ON THE PROTEIN WERE ALL NAMED D*, AND WERE ASSIGNED THE SCATTERING LENGTH OF DEUTERIUM. WHEN THE HYDROGEN IS ACTUALLY EXCHANGED BY DEUTERIUM, THE OCCUPANCY IS 1, AND WHEN IT IS ACTUALLY NOT EXCHANGED,THE OCCUPANCY IS -0.56. PART OF SITES OF HYDRATION WERE MODELIZED AS COMPLETE D2O ENTITIES (MOLECULE DOD), AND PART OF THEM WERE MODELIZED AS SINGLE OXYGEN ATOM (MOLECULE HOH), BECAUSE OF DYNAMICAL DISORDER. 4.7 BATCH TECHNIQUE EQUAL AMOUNT OF 1.0 % SOLUTION OF HEN EGG-WHITE LYSOZYME ( BOEHRINGER) AND 2.8 % NANO3 IN 50 MM ACETATE BUFFER (PH 4.7) software diffrn_detector diffrn_radiation diffrn_radiation_wavelength diffrn_source pdbx_struct_conn_angle struct_conn struct_site chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Non-polymer description Version format compliance Refinement description Data collection Derived calculations Data collection Database references Refinement description 1 0 1999-04-01 1 1 2008-04-26 1 2 2011-07-13 1 3 2017-10-04 1 4 2021-06-30 1 5 2023-12-27 _software.classification _diffrn_detector.detector _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession PDBE Y RCSB 1999-03-23 REL NO3 NITRATE ION NA SODIUM ION DOD water 4LZT PDB ENTRY 4LZT PDB experimental model NO3 1130 2 NO3 NO3 1130 A NO3 1132 2 NO3 NO3 1132 A NO3 1151 2 NO3 NO3 1151 A NO3 1349 2 NO3 NO3 1349 A NO3 1350 2 NO3 NO3 1350 A NA 1453 3 NA NA 1453 A HOH 1133 4 DOD DOD 1133 A HOH 1134 4 DOD DOD 1134 A HOH 1135 4 DOD DOD 1135 A HOH 1136 4 DOD DOD 1136 A HOH 1138 4 DOD DOD 1138 A HOH 1139 4 DOD DOD 1139 A HOH 1140 4 DOD DOD 1140 A HOH 1141 4 DOD DOD 1141 A HOH 1142 4 DOD DOD 1142 A HOH 1143 4 DOD DOD 1143 A HOH 1144 4 DOD DOD 1144 A HOH 1145 4 DOD DOD 1145 A HOH 1146 4 HOH HOH 1146 A HOH 1147 4 DOD DOD 1147 A HOH 1148 4 DOD DOD 1148 A HOH 1149 4 DOD DOD 1149 A HOH 1150 4 DOD DOD 1150 A HOH 1152 4 DOD DOD 1152 A HOH 1153 4 DOD DOD 1153 A HOH 1154 4 DOD DOD 1154 A HOH 1155 4 DOD DOD 1155 A HOH 1156 4 DOD DOD 1156 A HOH 1157 4 HOH HOH 1157 A HOH 1158 4 DOD DOD 1158 A HOH 1159 4 HOH HOH 1159 A HOH 1160 4 DOD DOD 1160 A HOH 1161 4 HOH HOH 1161 A HOH 1162 4 HOH HOH 1162 A HOH 1163 4 DOD DOD 1163 A HOH 1164 4 DOD DOD 1164 A HOH 1165 4 DOD DOD 1165 A HOH 1167 4 DOD DOD 1167 A HOH 1168 4 DOD DOD 1168 A HOH 1169 4 DOD DOD 1169 A HOH 1170 4 DOD DOD 1170 A HOH 1171 4 DOD DOD 1171 A HOH 1172 4 DOD DOD 1172 A HOH 1173 4 HOH HOH 1173 A HOH 1174 4 DOD DOD 1174 A HOH 1175 4 DOD DOD 1175 A HOH 1176 4 HOH HOH 1176 A HOH 1177 4 DOD DOD 1177 A HOH 1179 4 DOD DOD 1179 A HOH 1180 4 HOH HOH 1180 A HOH 1181 4 HOH HOH 1181 A HOH 1183 4 DOD DOD 1183 A HOH 1184 4 DOD DOD 1184 A HOH 1185 4 HOH HOH 1185 A HOH 1187 4 HOH HOH 1187 A HOH 1188 4 HOH HOH 1188 A HOH 1189 4 HOH HOH 1189 A HOH 1190 4 HOH HOH 1190 A HOH 1191 4 HOH HOH 1191 A HOH 1192 4 DOD DOD 1192 A HOH 1193 4 DOD DOD 1193 A HOH 1194 4 DOD DOD 1194 A HOH 1195 4 DOD DOD 1195 A HOH 1196 4 HOH HOH 1196 A HOH 1198 4 DOD DOD 1198 A HOH 1201 4 DOD DOD 1201 A HOH 1202 4 DOD DOD 1202 A HOH 1204 4 HOH HOH 1204 A HOH 1208 4 DOD DOD 1208 A HOH 1209 4 HOH HOH 1209 A HOH 1210 4 DOD DOD 1210 A HOH 1212 4 DOD DOD 1212 A HOH 1215 4 DOD DOD 1215 A HOH 1216 4 HOH HOH 1216 A HOH 1217 4 DOD DOD 1217 A HOH 1219 4 HOH HOH 1219 A HOH 1222 4 HOH HOH 1222 A HOH 1226 4 DOD DOD 1226 A HOH 1228 4 DOD DOD 1228 A HOH 1229 4 DOD DOD 1229 A HOH 1230 4 HOH HOH 1230 A HOH 1233 4 DOD DOD 1233 A HOH 1234 4 DOD DOD 1234 A HOH 1235 4 HOH HOH 1235 A HOH 1236 4 HOH HOH 1236 A HOH 1238 4 HOH HOH 1238 A HOH 1239 4 HOH HOH 1239 A HOH 1240 4 DOD DOD 1240 A HOH 1241 4 DOD DOD 1241 A HOH 1242 4 HOH HOH 1242 A HOH 1246 4 DOD DOD 1246 A HOH 1247 4 DOD DOD 1247 A HOH 1250 4 DOD DOD 1250 A HOH 1253 4 DOD DOD 1253 A HOH 1254 4 DOD DOD 1254 A HOH 1255 4 HOH HOH 1255 A HOH 1256 4 DOD DOD 1256 A HOH 1258 4 DOD DOD 1258 A HOH 1260 4 DOD DOD 1260 A HOH 1261 4 DOD DOD 1261 A HOH 1263 4 HOH HOH 1263 A HOH 1264 4 DOD DOD 1264 A HOH 1265 4 DOD DOD 1265 A HOH 1267 4 HOH HOH 1267 A HOH 1269 4 HOH HOH 1269 A HOH 1272 4 HOH HOH 1272 A HOH 1273 4 DOD DOD 1273 A HOH 1275 4 DOD DOD 1275 A HOH 1276 4 HOH HOH 1276 A HOH 1278 4 HOH HOH 1278 A HOH 1280 4 DOD DOD 1280 A HOH 1281 4 DOD DOD 1281 A HOH 1284 4 DOD DOD 1284 A HOH 1285 4 DOD DOD 1285 A HOH 1287 4 DOD DOD 1287 A HOH 1288 4 DOD DOD 1288 A HOH 1289 4 HOH HOH 1289 A HOH 1291 4 DOD DOD 1291 A HOH 1292 4 HOH HOH 1292 A HOH 1293 4 HOH HOH 1293 A HOH 1294 4 HOH HOH 1294 A HOH 1295 4 HOH HOH 1295 A HOH 1296 4 HOH HOH 1296 A HOH 1297 4 HOH HOH 1297 A HOH 1302 4 DOD DOD 1302 A HOH 1303 4 HOH HOH 1303 A HOH 1305 4 HOH HOH 1305 A HOH 1307 4 HOH HOH 1307 A HOH 1308 4 DOD DOD 1308 A HOH 1309 4 HOH HOH 1309 A HOH 1310 4 HOH HOH 1310 A HOH 1311 4 DOD DOD 1311 A HOH 1314 4 DOD DOD 1314 A HOH 1317 4 DOD DOD 1317 A HOH 1318 4 DOD DOD 1318 A HOH 1320 4 HOH HOH 1320 A HOH 1323 4 HOH HOH 1323 A HOH 1324 4 DOD DOD 1324 A HOH 1328 4 DOD DOD 1328 A HOH 1332 4 DOD DOD 1332 A HOH 1333 4 DOD DOD 1333 A HOH 1337 4 DOD DOD 1337 A HOH 1339 4 HOH HOH 1339 A HOH 1341 4 DOD DOD 1341 A HOH 1342 4 HOH HOH 1342 A HOH 1343 4 DOD DOD 1343 A HOH 1347 4 HOH HOH 1347 A HOH 1351 4 HOH HOH 1351 A HOH 1356 4 HOH HOH 1356 A HOH 1364 4 DOD DOD 1364 A HOH 1365 4 DOD DOD 1365 A HOH 1367 4 DOD DOD 1367 A HOH 1380 4 HOH HOH 1380 A HOH 1382 4 DOD DOD 1382 A HOH 1383 4 HOH HOH 1383 A HOH 1386 4 HOH HOH 1386 A HOH 1387 4 HOH HOH 1387 A HOH 1388 4 DOD DOD 1388 A HOH 1389 4 HOH HOH 1389 A HOH 1391 4 HOH HOH 1391 A HOH 1396 4 HOH HOH 1396 A HOH 1397 4 HOH HOH 1397 A HOH 1398 4 HOH HOH 1398 A HOH 1400 4 HOH HOH 1400 A HOH 1401 4 HOH HOH 1401 A HOH 1402 4 HOH HOH 1402 A HOH 1404 4 HOH HOH 1404 A HOH 1405 4 DOD DOD 1405 A HOH 1406 4 HOH HOH 1406 A HOH 1407 4 HOH HOH 1407 A HOH 1410 4 HOH HOH 1410 A HOH 1411 4 HOH HOH 1411 A HOH 1412 4 DOD DOD 1412 A HOH 1417 4 HOH HOH 1417 A HOH 1418 4 HOH HOH 1418 A HOH 1420 4 HOH HOH 1420 A HOH 1421 4 DOD DOD 1421 A HOH 1424 4 HOH HOH 1424 A HOH 1428 4 HOH HOH 1428 A HOH 1432 4 HOH HOH 1432 A HOH 1433 4 DOD DOD 1433 A HOH 1434 4 DOD DOD 1434 A HOH 1435 4 HOH HOH 1435 A HOH 1437 4 HOH HOH 1437 A HOH 1438 4 HOH HOH 1438 A HOH 1439 4 HOH HOH 1439 A HOH 1440 4 DOD DOD 1440 A HOH 1441 4 DOD DOD 1441 A HOH 1442 4 HOH HOH 1442 A HOH 1443 4 HOH HOH 1443 A HOH 1444 4 HOH HOH 1444 A HOH 1445 4 HOH HOH 1445 A HOH 1447 4 HOH HOH 1447 A HOH 1448 4 HOH HOH 1448 A HOH 1459 4 DOD DOD 1459 A HOH 1463 4 DOD DOD 1463 A HOH 1470 4 DOD DOD 1470 A HOH 1472 4 HOH HOH 1472 A HOH 1474 4 HOH HOH 1474 A HOH 1476 4 DOD DOD 1476 A HOH 1478 4 HOH HOH 1478 A HOH 1480 4 DOD DOD 1480 A HOH 1482 4 DOD DOD 1482 A HOH 1483 4 DOD DOD 1483 A HOH 1484 4 DOD DOD 1484 A HOH 1485 4 HOH HOH 1485 A HOH 1486 4 HOH HOH 1486 A HOH 2002 4 HOH HOH 2002 A HOH 2004 4 HOH HOH 2004 A HOH 2006 4 HOH HOH 2006 A HOH 2013 4 HOH HOH 2013 A HOH 2015 4 HOH HOH 2015 A HOH 2018 4 HOH HOH 2018 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2026 4 HOH HOH 2026 A HOH 2031 4 HOH HOH 2031 A HOH 2033 4 HOH HOH 2033 A HOH 2036 4 HOH HOH 2036 A HOH 2040 4 HOH HOH 2040 A HOH 2041 4 HOH HOH 2041 A HOH 2042 4 HOH HOH 2042 A HOH 2044 4 HOH HOH 2044 A HOH 2045 4 DOD DOD 2045 A HOH 2047 4 DOD DOD 2047 A HOH 2052 4 HOH HOH 2052 A HOH 2053 4 HOH HOH 2053 A HOH 2062 4 HOH HOH 2062 A HOH 2067 4 HOH HOH 2067 A HOH 2068 4 HOH HOH 2068 A HOH 2069 4 HOH HOH 2069 A HOH 2070 4 HOH HOH 2070 A HOH 2071 4 DOD DOD 2071 A HOH 2072 4 HOH HOH 2072 A HOH 2074 4 HOH HOH 2074 A HOH 2076 4 DOD DOD 2076 A HOH 2077 4 HOH HOH 2077 A HOH 2079 4 HOH HOH 2079 A HOH 2080 4 HOH HOH 2080 A HOH 2081 4 HOH HOH 2081 A HOH 2082 4 HOH HOH 2082 A HOH 2085 4 HOH HOH 2085 A HOH 2086 4 HOH HOH 2086 A HOH 2087 4 HOH HOH 2087 A HOH 2089 4 HOH HOH 2089 A HOH 2090 4 HOH HOH 2090 A HOH 2091 4 HOH HOH 2091 A HOH 2103 4 DOD DOD 2103 A HOH 2203 4 HOH HOH 2203 A LYS 1 n 1 LYS 1 A VAL 2 n 2 VAL 2 A PHE 3 n 3 PHE 3 A GLY 4 n 4 GLY 4 A ARG 5 n 5 ARG 5 A CYS 6 n 6 CYS 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A MET 12 n 12 MET 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A HIS 15 n 15 HIS 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ASN 19 n 19 ASN 19 A TYR 20 n 20 TYR 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A TYR 23 n 23 TYR 23 A SER 24 n 24 SER 24 A LEU 25 n 25 LEU 25 A GLY 26 n 26 GLY 26 A ASN 27 n 27 ASN 27 A TRP 28 n 28 TRP 28 A VAL 29 n 29 VAL 29 A CYS 30 n 30 CYS 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A ASN 37 n 37 ASN 37 A PHE 38 n 38 PHE 38 A ASN 39 n 39 ASN 39 A THR 40 n 40 THR 40 A GLN 41 n 41 GLN 41 A ALA 42 n 42 ALA 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A ASN 46 n 46 ASN 46 A THR 47 n 47 THR 47 A ASP 48 n 48 ASP 48 A GLY 49 n 49 GLY 49 A SER 50 n 50 SER 50 A THR 51 n 51 THR 51 A ASP 52 n 52 ASP 52 A TYR 53 n 53 TYR 53 A GLY 54 n 54 GLY 54 A ILE 55 n 55 ILE 55 A LEU 56 n 56 LEU 56 A GLN 57 n 57 GLN 57 A ILE 58 n 58 ILE 58 A ASN 59 n 59 ASN 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A TRP 62 n 62 TRP 62 A TRP 63 n 63 TRP 63 A CYS 64 n 64 CYS 64 A ASN 65 n 65 ASN 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A ARG 68 n 68 ARG 68 A THR 69 n 69 THR 69 A PRO 70 n 70 PRO 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A LEU 75 n 75 LEU 75 A CYS 76 n 76 CYS 76 A ASN 77 n 77 ASN 77 A ILE 78 n 78 ILE 78 A PRO 79 n 79 PRO 79 A CYS 80 n 80 CYS 80 A SER 81 n 81 SER 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A SER 86 n 86 SER 86 A ASP 87 n 87 ASP 87 A ILE 88 n 88 ILE 88 A THR 89 n 89 THR 89 A ALA 90 n 90 ALA 90 A SER 91 n 91 SER 91 A VAL 92 n 92 VAL 92 A ASN 93 n 93 ASN 93 A CYS 94 n 94 CYS 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A LYS 97 n 97 LYS 97 A ILE 98 n 98 ILE 98 A VAL 99 n 99 VAL 99 A SER 100 n 100 SER 100 A ASP 101 n 101 ASP 101 A GLY 102 n 102 GLY 102 A ASN 103 n 103 ASN 103 A GLY 104 n 104 GLY 104 A MET 105 n 105 MET 105 A ASN 106 n 106 ASN 106 A ALA 107 n 107 ALA 107 A TRP 108 n 108 TRP 108 A VAL 109 n 109 VAL 109 A ALA 110 n 110 ALA 110 A TRP 111 n 111 TRP 111 A ARG 112 n 112 ARG 112 A ASN 113 n 113 ASN 113 A ARG 114 n 114 ARG 114 A CYS 115 n 115 CYS 115 A LYS 116 n 116 LYS 116 A GLY 117 n 117 GLY 117 A THR 118 n 118 THR 118 A ASP 119 n 119 ASP 119 A VAL 120 n 120 VAL 120 A GLN 121 n 121 GLN 121 A ALA 122 n 122 ALA 122 A TRP 123 n 123 TRP 123 A ILE 124 n 124 ILE 124 A ARG 125 n 125 ARG 125 A GLY 126 n 126 GLY 126 A CYS 127 n 127 CYS 127 A ARG 128 n 128 ARG 128 A LEU 129 n 129 LEU 129 A author_defined_assembly 1 monomeric A SER 36 A O SER 36 1_555 A NA 1453 G NA NA 1_555 A ASN 37 A N ASN 37 1_555 52.8 A SER 36 A O SER 36 1_555 A NA 1453 G NA NA 1_555 A ASN 37 A O ASN 37 1_555 122.7 A ASN 37 A N ASN 37 1_555 A NA 1453 G NA NA 1_555 A ASN 37 A O ASN 37 1_555 84.1 A SER 36 A O SER 36 1_555 A NA 1453 G NA NA 1_555 A DOD 1143 H O DOD 1_555 75.4 A ASN 37 A N ASN 37 1_555 A NA 1453 G NA NA 1_555 A DOD 1143 H O DOD 1_555 113.4 A ASN 37 A O ASN 37 1_555 A NA 1453 G NA NA 1_555 A DOD 1143 H O DOD 1_555 161.2 A SER 36 A O SER 36 1_555 A NA 1453 G NA NA 1_555 A DOD 1333 H O DOD 1_555 171.3 A ASN 37 A N ASN 37 1_555 A NA 1453 G NA NA 1_555 A DOD 1333 H O DOD 1_555 126.7 A ASN 37 A O ASN 37 1_555 A NA 1453 G NA NA 1_555 A DOD 1333 H O DOD 1_555 50.8 A DOD 1143 H O DOD 1_555 A NA 1453 G NA NA 1_555 A DOD 1333 H O DOD 1_555 110.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ASN 44 A O ASN 44 A N ASP 52 A N ASP 52 1 A A DH12 DH22 ARG ARG 45 68 1.38 1 A A D O1 ILE NO3 88 1151 1.51 1 4.88 0.50 120.30 125.18 A A A NE CZ NH1 ARG ARG ARG 5 5 5 N 1 8.49 1.10 119.40 127.89 A A A NH1 CZ NH2 ARG ARG ARG 14 14 14 N 1 -5.93 0.50 120.30 114.37 A A A NE CZ NH1 ARG ARG ARG 14 14 14 N 1 4.02 0.50 120.30 124.32 A A A NE CZ NH2 ARG ARG ARG 21 21 21 N 1 16.19 2.60 111.60 127.79 A A A CB CG CD ARG ARG ARG 45 45 45 N 1 19.42 1.40 123.60 143.02 A A A CD NE CZ ARG ARG ARG 45 45 45 N 1 -3.72 0.50 120.30 116.58 A A A NE CZ NH1 ARG ARG ARG 45 45 45 N 1 7.74 0.50 120.30 128.04 A A A NE CZ NH2 ARG ARG ARG 45 45 45 N 1 9.25 1.40 123.60 132.85 A A A CD NE CZ ARG ARG ARG 61 61 61 N 1 12.95 1.40 123.60 136.55 A A A CD NE CZ ARG ARG ARG 68 68 68 N 1 5.07 0.50 120.30 125.37 A A A NE CZ NH1 ARG ARG ARG 68 68 68 N 1 -4.02 0.50 120.30 116.28 A A A NE CZ NH2 ARG ARG ARG 68 68 68 N 1 -8.90 0.90 118.30 109.40 A A A CB CG OD2 ASP ASP ASP 87 87 87 N 1 -10.94 1.60 122.70 111.76 A A A O C N VAL VAL SER 99 99 100 Y 1 -12.64 2.10 122.30 109.66 A A A C N CA ASN GLY GLY 103 104 104 Y 1 -3.51 0.50 120.30 116.79 A A A NE CZ NH2 ARG ARG ARG 125 125 125 N 1 48.39 1.40 123.60 171.99 A A A CD NE CZ ARG ARG ARG 128 128 128 N 1 4.85 0.50 120.30 125.15 A A A NE CZ NH1 ARG ARG ARG 128 128 128 N 1 A A CG CD ARG ARG 45 45 -0.223 0.025 1.515 1.292 N 1 A A CZ NH2 ARG ARG 45 45 0.105 0.013 1.326 1.431 N 1 A A DZ1 O2 LYS NO3 116 1349 1.58 1_555 1_665 PARALLH22X.PRO TOPALLH22X 17.82 POSITIONS OF NON HYDROGEN ATOMS OF THE PROTEIN WERE KEPT FROM 4LZT, BECAUSE NEUTRON REFINEMENT CAN'T PROVIDE BETTER POSITIONS . WE BETTER FOCUSED OUR ATTENTION ON MODELING HYDROGEN AND HYDRATION SITES 0.221 0.204 1.7 13.6 471 8976 5 83 RANDOM 10000 0.0 1 RESTRAINED THROUGHOUT 2 MOLECULAR REPLACEMEN XPLOR PDB ENTRY 4LZT 1.7 13.6 243 1265 21 0 1001 0.016 0.033 1.7 13.6 1LZN 8976 2 0.146 0.114 1 35 3.7 83 refinement CCP4 LAUE SUITE MODIFIED FOR CYLINDER GEOMETRY (C. WILKINSON) data reduction CCP4 LAUE SUITE refinement X-PLOR 3.1 data scaling CCP4 (LAUE SUITE) NEUTRON STRUCTURE OF HEN EGG-WHITE LYSOZYME 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 4 N N A ARG 5 A ARG 5 HELX_P A ARG 14 A ARG 14 1 1 10 A TYR 20 A TYR 20 HELX_P A GLY 22 A GLY 22 5 2 3 A LEU 25 A LEU 25 HELX_P A SER 36 A SER 36 1 3 12 A CYS 80 A CYS 80 HELX_P A LEU 84 A LEU 84 5 4 5 A THR 89 A THR 89 HELX_P A SER 100 A SER 100 1 5 12 A MET 105 A MET 105 HELX_P A ALA 107 A ALA 107 5 6 3 A VAL 109 A VAL 109 HELX_P A ARG 114 A ARG 114 1 7 6 A VAL 120 A VAL 120 HELX_P A TRP 123 A TRP 123 5 8 4 disulf 2.042 A CYS 6 A SG CYS 6 1_555 A CYS 127 A SG CYS 127 1_555 disulf 2.028 A CYS 30 A SG CYS 30 1_555 A CYS 115 A SG CYS 115 1_555 disulf 2.024 A CYS 64 A SG CYS 64 1_555 A CYS 80 A SG CYS 80 1_555 disulf 2.024 A CYS 76 A SG CYS 76 1_555 A CYS 94 A SG CYS 94 1_555 metalc 1.450 A SER 36 A O SER 36 1_555 A NA 1453 G NA NA 1_555 metalc 2.781 A ASN 37 A N ASN 37 1_555 A NA 1453 G NA NA 1_555 metalc 2.485 A ASN 37 A O ASN 37 1_555 A NA 1453 G NA NA 1_555 metalc 2.806 A DOD 1143 H O DOD 1_555 A NA 1453 G NA NA 1_555 metalc 2.931 A DOD 1333 H O DOD 1_555 A NA 1453 G NA NA 1_555 HYDROLASE HYDROLASE LYSC_CHICK UNP 1 P00698 19 147 1LZN 1 129 P00698 A 1 1 129 2 anti-parallel A THR 43 A THR 43 A ARG 45 A ARG 45 A THR 51 A THR 51 A TYR 53 A TYR 53 BINDING SITE FOR RESIDUE NO3 A 1130 A NO3 1130 Software 3 BINDING SITE FOR RESIDUE NO3 A 1132 A NO3 1132 Software 6 BINDING SITE FOR RESIDUE NO3 A 1151 A NO3 1151 Software 7 BINDING SITE FOR RESIDUE NO3 A 1349 A NO3 1349 Software 5 BINDING SITE FOR RESIDUE NO3 A 1350 A NO3 1350 Software 6 BINDING SITE FOR RESIDUE NA A 1453 A NA 1453 Software 6 A ASN 65 A ASN 65 3 1_555 A ASP 66 A ASP 66 3 1_555 A SER 81 A SER 81 3 1_555 A ARG 5 A ARG 5 6 1_555 A LYS 33 A LYS 33 6 1_555 A PHE 38 A PHE 38 6 1_555 A HOH 1347 H HOH 6 1_555 A HOH 1444 H HOH 6 1_555 A HOH 2026 H HOH 6 1_555 A PHE 3 A PHE 3 7 1_555 A HIS 15 A HIS 15 7 1_555 A SER 86 A SER 86 7 1_555 A ASP 87 A ASP 87 7 1_555 A ILE 88 A ILE 88 7 1_555 A HOH 1235 H HOH 7 1_555 A DOD 1382 H DOD 7 1_555 A ASN 65 A ASN 65 5 1_555 A ASN 74 A ASN 74 5 1_555 A ASN 77 A ASN 77 5 1_555 A ILE 78 A ILE 78 5 1_555 A PRO 79 A PRO 79 5 1_555 A SER 24 A SER 24 6 1_555 A LEU 25 A LEU 25 6 1_555 A GLY 26 A GLY 26 6 1_555 A GLN 121 A GLN 121 6 1_555 A ILE 124 A ILE 124 6 1_555 A DOD 1275 H DOD 6 1_555 A SER 36 A SER 36 6 1_555 A ASN 37 A ASN 37 6 1_555 A PHE 38 A PHE 38 6 1_555 A ASN 39 A ASN 39 6 1_555 A DOD 1143 H DOD 6 1_555 A DOD 1333 H DOD 6 1_555 1 P 1