0.015954 0.009211 0.000000 0.000000 0.018422 0.000000 0.000000 0.000000 0.012004 0.00000 0.00000 0.00000 Skalova, T. Hasek, J. Dohnalek, J. Petrokova, H. Buchtelova, E. Soucek, M. Majer, P. Uhlikova, T. Konvalinka, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 62.680 62.680 83.309 C38 H49 N5 O7 687.825 N-{(3S)-3-[(tert-butoxycarbonyl)amino]-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H6 O S 78.133 BETA-MERCAPTOETHANOL non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N C N 3 N O N 4 N C N 5 N C N 6 N C N 7 N C N 8 N N N 9 S C N 10 N C N 11 N C Y 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C Y 17 N C N 18 N C N 19 N N N 20 S C N 21 N C N 22 N O N 23 N C Y 24 N C Y 25 N C Y 26 N C Y 27 N C Y 28 N C Y 29 N C N 30 N N N 31 S C N 32 N C N 33 N O N 34 N C N 35 N C N 36 N C N 37 N O N 38 N O N 39 N N N 40 S C N 41 N C N 42 N O N 43 N C Y 44 N C Y 45 N C Y 46 N C Y 47 N C Y 48 N C Y 49 N C N 50 N N N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 S C N 102 N C N 103 N O N 104 N C N 105 N O N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 S C N 115 N C N 116 N O N 117 N C N 118 N C N 119 N C N 120 N N N 121 N C N 122 N N N 123 N N N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 N C N 145 N C N 146 N O N 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N N N 158 S C N 159 N C N 160 N O N 161 N C N 162 N C N 163 N O N 164 N O N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N C N 174 N C N 175 N O N 176 N S N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 R C N 185 N C N 186 N O N 187 N C N 188 N S N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C N 202 N C N 203 N C N 204 N O N 205 N N N 206 N O N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N O N 225 N O N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 N C N 238 N C N 239 N O N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C Y 251 N C Y 252 N N Y 253 N C Y 254 N C Y 255 N N N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N O N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 S C N 275 N C N 276 N C N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C N 297 N C N 298 N C N 299 N C N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 N C N 319 N C N 320 N C N 321 N C N 322 N N N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 N C N 344 N C N 345 N S N 346 N C N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C N 387 N C N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C N 404 N O N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N N N 414 S C N 415 N C N 416 N O N 417 R C N 418 N O N 419 N C N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C Y 435 N C Y 436 N C Y 437 N C Y 438 N N Y 439 N C Y 440 N C Y 441 N C Y 442 N C Y 443 N C N 444 N O N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N N N 458 S C N 459 N C N 460 N O N 461 N C Y 462 N C Y 463 N C Y 464 N C Y 465 N C Y 466 N C Y 467 N C N 468 N O N 469 N O N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N N N 482 S C N 483 N C N 484 N O N 485 N C N 486 N C N 487 N C N 488 N O N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing Y 27 N doub Y 28 N sing Y 29 N sing N 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing Y 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing Y 49 N doub Y 50 N sing Y 51 N sing N 52 N sing Y 53 N doub N 54 N sing Y 55 N doub N 56 N sing Y 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing Y 84 N doub Y 85 N sing Y 86 N sing N 87 N sing Y 88 N doub N 89 N sing Y 90 N doub N 91 N sing Y 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing Y 250 N sing Y 251 N doub Y 252 N doub N 253 N sing Y 254 N sing N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N doub N 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N doub N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing Y 427 N doub Y 428 N sing Y 429 N sing N 430 N sing Y 431 N doub Y 432 N sing Y 433 N sing N 434 N sing Y 435 N sing Y 436 N doub N 437 N sing Y 438 N doub N 439 N sing Y 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N doub N 451 N sing N 452 N sing N 453 N sing N 454 N sing Y 455 N doub Y 456 N sing Y 457 N sing N 458 N sing Y 459 N doub N 460 N sing Y 461 N doub N 462 N sing Y 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N doub N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 46 1636 1644 10.1021/jm021079g 12699382 An Ethylenamine Inhibitor Binds Tightly to Both Wild Type and Mutant HIV-1 Proteases. Structure and Energy Study 2003 10.2210/pdb1lzq/pdb pdb_00001lzq 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2000-04-12 MARRESEARCH Diamond (111), Sagitally focusing Ge(220) and a multilayer SINGLE WAVELENGTH M x-ray 1 0.9340 1.0 ID14-1 ESRF 0.9340 SYNCHROTRON ESRF BEAMLINE ID14-1 10819.756 PROTEASE RETROPEPSIN 3.4.23.16 A71V, V82T, I84V 2 man polymer 687.825 N-{(3S)-3-[(tert-butoxycarbonyl)amino]-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide 1 syn non-polymer 78.133 BETA-MERCAPTOETHANOL 1 syn non-polymer 18.015 water 86 nat water HIV-1 PROTEASE E.C.3.4.23.16 no no PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKVIGTVLVGPT PTNVIGRNLLTQIGCTLNF PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKVIGTVLVGPT PTNVIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n gag-pol sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 1 2.2 43.7 VAPOR DIFFUSION, HANGING DROP 4.4 NaCl, GLYCEROL, pH 4.4, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Source and taxonomy Structure summary Version format compliance Other Database references Derived calculations Data collection 1 0 2003-04-29 1 1 2007-10-16 1 2 2011-07-13 1 3 2012-12-12 1 4 2021-10-27 1 5 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id HIV-1 protease with a similar inhibitor HIV-1 protease with a similar inhibitor HIV-1 protease with a similar inhibitor RCSB Y RCSB 2002-06-11 REL REL 0ZQ N-{(3S)-3-[(tert-butoxycarbonyl)amino]-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide BME BETA-MERCAPTOETHANOL HOH water Inhibitor BOC-PHE-PSI[CH2CH2NH]-PHE-GLU-PHE-NH2 Peptide-like BOC 201 2 0ZQ 0ZQ 201 A BME 387 3 BME BME 387 A HOH 302 4 HOH HOH 302 A HOH 303 4 HOH HOH 303 A HOH 306 4 HOH HOH 306 A HOH 308 4 HOH HOH 308 A HOH 310 4 HOH HOH 310 A HOH 312 4 HOH HOH 312 A HOH 314 4 HOH HOH 314 A HOH 315 4 HOH HOH 315 A HOH 317 4 HOH HOH 317 A HOH 318 4 HOH HOH 318 A HOH 323 4 HOH HOH 323 A HOH 326 4 HOH HOH 326 A HOH 327 4 HOH HOH 327 A HOH 334 4 HOH HOH 334 A HOH 335 4 HOH HOH 335 A HOH 336 4 HOH HOH 336 A HOH 338 4 HOH HOH 338 A HOH 340 4 HOH HOH 340 A HOH 343 4 HOH HOH 343 A HOH 344 4 HOH HOH 344 A HOH 346 4 HOH HOH 346 A HOH 347 4 HOH HOH 347 A HOH 348 4 HOH HOH 348 A HOH 349 4 HOH HOH 349 A HOH 352 4 HOH HOH 352 A HOH 353 4 HOH HOH 353 A HOH 354 4 HOH HOH 354 A HOH 355 4 HOH HOH 355 A HOH 357 4 HOH HOH 357 A HOH 361 4 HOH HOH 361 A HOH 362 4 HOH HOH 362 A HOH 365 4 HOH HOH 365 A HOH 368 4 HOH HOH 368 A HOH 370 4 HOH HOH 370 A HOH 373 4 HOH HOH 373 A HOH 374 4 HOH HOH 374 A HOH 375 4 HOH HOH 375 A HOH 379 4 HOH HOH 379 A HOH 382 4 HOH HOH 382 A HOH 385 4 HOH HOH 385 A HOH 301 4 HOH HOH 301 B HOH 304 4 HOH HOH 304 B HOH 305 4 HOH HOH 305 B HOH 307 4 HOH HOH 307 B HOH 309 4 HOH HOH 309 B HOH 311 4 HOH HOH 311 B HOH 313 4 HOH HOH 313 B HOH 316 4 HOH HOH 316 B HOH 319 4 HOH HOH 319 B HOH 320 4 HOH HOH 320 B HOH 321 4 HOH HOH 321 B HOH 322 4 HOH HOH 322 B HOH 324 4 HOH HOH 324 B HOH 325 4 HOH HOH 325 B HOH 328 4 HOH HOH 328 B HOH 329 4 HOH HOH 329 B HOH 330 4 HOH HOH 330 B HOH 331 4 HOH HOH 331 B HOH 332 4 HOH HOH 332 B HOH 333 4 HOH HOH 333 B HOH 337 4 HOH HOH 337 B HOH 341 4 HOH HOH 341 B HOH 342 4 HOH HOH 342 B HOH 345 4 HOH HOH 345 B HOH 350 4 HOH HOH 350 B HOH 351 4 HOH HOH 351 B HOH 356 4 HOH HOH 356 B HOH 358 4 HOH HOH 358 B HOH 359 4 HOH HOH 359 B HOH 360 4 HOH HOH 360 B HOH 363 4 HOH HOH 363 B HOH 364 4 HOH HOH 364 B HOH 366 4 HOH HOH 366 B HOH 367 4 HOH HOH 367 B HOH 369 4 HOH HOH 369 B HOH 371 4 HOH HOH 371 B HOH 372 4 HOH HOH 372 B HOH 376 4 HOH HOH 376 B HOH 377 4 HOH HOH 377 B HOH 378 4 HOH HOH 378 B HOH 380 4 HOH HOH 380 B HOH 381 4 HOH HOH 381 B HOH 383 4 HOH HOH 383 B HOH 384 4 HOH HOH 384 B HOH 386 4 HOH HOH 386 B HOH 389 4 HOH HOH 389 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A THR 82 n 82 THR 82 A ASN 83 n 83 ASN 83 A VAL 84 n 84 VAL 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 101 n 1 PRO 101 B GLN 102 n 2 GLN 102 B ILE 103 n 3 ILE 103 B THR 104 n 4 THR 104 B LEU 105 n 5 LEU 105 B TRP 106 n 6 TRP 106 B GLN 107 n 7 GLN 107 B ARG 108 n 8 ARG 108 B PRO 109 n 9 PRO 109 B LEU 110 n 10 LEU 110 B VAL 111 n 11 VAL 111 B THR 112 n 12 THR 112 B ILE 113 n 13 ILE 113 B LYS 114 n 14 LYS 114 B ILE 115 n 15 ILE 115 B GLY 116 n 16 GLY 116 B GLY 117 n 17 GLY 117 B GLN 118 n 18 GLN 118 B LEU 119 n 19 LEU 119 B LYS 120 n 20 LYS 120 B GLU 121 n 21 GLU 121 B ALA 122 n 22 ALA 122 B LEU 123 n 23 LEU 123 B LEU 124 n 24 LEU 124 B ASP 125 n 25 ASP 125 B THR 126 n 26 THR 126 B GLY 127 n 27 GLY 127 B ALA 128 n 28 ALA 128 B ASP 129 n 29 ASP 129 B ASP 130 n 30 ASP 130 B THR 131 n 31 THR 131 B VAL 132 n 32 VAL 132 B LEU 133 n 33 LEU 133 B GLU 134 n 34 GLU 134 B GLU 135 n 35 GLU 135 B MET 136 n 36 MET 136 B SER 137 n 37 SER 137 B LEU 138 n 38 LEU 138 B PRO 139 n 39 PRO 139 B GLY 140 n 40 GLY 140 B ARG 141 n 41 ARG 141 B TRP 142 n 42 TRP 142 B LYS 143 n 43 LYS 143 B PRO 144 n 44 PRO 144 B LYS 145 n 45 LYS 145 B MET 146 n 46 MET 146 B ILE 147 n 47 ILE 147 B GLY 148 n 48 GLY 148 B GLY 149 n 49 GLY 149 B ILE 150 n 50 ILE 150 B GLY 151 n 51 GLY 151 B GLY 152 n 52 GLY 152 B PHE 153 n 53 PHE 153 B ILE 154 n 54 ILE 154 B LYS 155 n 55 LYS 155 B VAL 156 n 56 VAL 156 B ARG 157 n 57 ARG 157 B GLN 158 n 58 GLN 158 B TYR 159 n 59 TYR 159 B ASP 160 n 60 ASP 160 B GLN 161 n 61 GLN 161 B ILE 162 n 62 ILE 162 B LEU 163 n 63 LEU 163 B ILE 164 n 64 ILE 164 B GLU 165 n 65 GLU 165 B ILE 166 n 66 ILE 166 B CYS 167 n 67 CYS 167 B GLY 168 n 68 GLY 168 B HIS 169 n 69 HIS 169 B LYS 170 n 70 LYS 170 B VAL 171 n 71 VAL 171 B ILE 172 n 72 ILE 172 B GLY 173 n 73 GLY 173 B THR 174 n 74 THR 174 B VAL 175 n 75 VAL 175 B LEU 176 n 76 LEU 176 B VAL 177 n 77 VAL 177 B GLY 178 n 78 GLY 178 B PRO 179 n 79 PRO 179 B THR 180 n 80 THR 180 B PRO 181 n 81 PRO 181 B THR 182 n 82 THR 182 B ASN 183 n 83 ASN 183 B VAL 184 n 84 VAL 184 B ILE 185 n 85 ILE 185 B GLY 186 n 86 GLY 186 B ARG 187 n 87 ARG 187 B ASN 188 n 88 ASN 188 B LEU 189 n 89 LEU 189 B LEU 190 n 90 LEU 190 B THR 191 n 91 THR 191 B GLN 192 n 92 GLN 192 B ILE 193 n 93 ILE 193 B GLY 194 n 94 GLY 194 B CYS 195 n 95 CYS 195 B THR 196 n 96 THR 196 B LEU 197 n 97 LEU 197 B ASN 198 n 98 ASN 198 B PHE 199 n 99 PHE 199 B author_and_software_defined_assembly PISA 2 dimeric 4320 -22 9040 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 3 A N ILE 3 B O LEU 197 B O LEU 97 B N ASN 198 B N ASN 98 A O THR 96 A O THR 96 A O LEU 97 A O LEU 97 B N ILE 103 B N ILE 3 A O VAL 11 A O VAL 11 A N ALA 22 A N ALA 22 A O LEU 23 A O LEU 23 A N ILE 85 A N ILE 85 A N THR 31 A N THR 31 A O THR 74 A O THR 74 A O VAL 77 A O VAL 77 A N ARG 57 A N ARG 57 A O GLU 65 A O GLU 65 A N LYS 14 A N LYS 14 A N ILE 15 A N ILE 15 A O GLN 18 A O GLN 18 A N THR 31 A N THR 31 A O THR 74 A O THR 74 A O VAL 77 A O VAL 77 A N ARG 57 A N ARG 57 A N GLN 58 A N GLN 58 A O LYS 43 A O LYS 43 B O VAL 111 B O VAL 11 B N ALA 122 B N ALA 22 B O LEU 123 B O LEU 23 B N ILE 185 B N ILE 85 B N THR 131 B N THR 31 B O THR 174 B O THR 74 B O VAL 177 B O VAL 77 B N ARG 157 B N ARG 57 B O GLU 165 B O GLU 65 B N LYS 114 B N LYS 14 B N ILE 115 B N ILE 15 B O GLN 118 B O GLN 18 B N THR 131 B N THR 31 B O THR 174 B O THR 74 B O VAL 177 B O VAL 77 B N ARG 157 B N ARG 57 B N GLN 158 B N GLN 58 B O LYS 143 B O LYS 43 1 -16.34 2.70 111.00 94.66 A A A N CA C ILE ILE ILE 50 50 50 B N 1 B GLU 134 -58.62 172.83 1 B TRP 142 -171.07 -179.36 35. 0.252 0.203 0.208 0.208 2.20 33. 533 9504 9492 5.6 99.9 RANDOM 1 ISOTROPIC THROUGHOUT EXCEPT LAST CYCLE 0.0 MOLECULAR REPLACEMENT CNS 0.30 0.27 5.00 0.34 0.30 2.20 33. 86 1658 54 0 1518 0.012 1.60 1.60 26.47 1.10 1.598 1.5 2.632 2.0 2.277 2.0 3.471 2.5 0.3176 0.2959 2.27 10 31.8 2.20 33.0 1LZQ 9504 9492 0.0 0.0 0.079 1 6.5 99.9 0.449 2.20 2.26 3.3 1 100.0 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 1.0 Crystal structure of the complex of mutant HIV-1 protease (A71V, V82T, I84V) with an ethylenamine peptidomimetic inhibitor BOC-PHE-PSI[CH2CH2NH]-PHE-GLU-PHE-NH2 1 N N 1 N N 2 N N 3 N N 4 N N 4 N N BIOLOGICAL ASSEMBLY IS A DIMER IN THE ASSYMETRIC UNIT A GLY 86 A GLY 86 HELX_P A THR 91 A THR 91 1 1 6 A GLN 92 A GLN 92 HELX_P A GLY 94 A GLY 94 5 2 3 B GLY 186 B GLY 86 HELX_P B THR 191 B THR 91 1 3 6 B GLN 192 B GLN 92 HELX_P B GLY 194 B GLY 94 5 4 3 HYDROLASE/HYDROLASE INHIBITOR HIV, PEPTIDOMIMETIC, ethylenamine ISOSTERE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX POL_HV1BR UNP 1 501 P03367 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF 501 599 1LZQ 1 99 P03367 A 1 1 99 501 599 1LZQ 101 199 P03367 B 1 1 99 1 ALA engineered mutation VAL 71 1LZQ A P03367 UNP 571 71 1 VAL engineered mutation THR 82 1LZQ A P03367 UNP 582 82 1 ILE engineered mutation VAL 84 1LZQ A P03367 UNP 584 84 2 ALA engineered mutation VAL 171 1LZQ B P03367 UNP 571 71 2 VAL engineered mutation THR 182 1LZQ B P03367 UNP 582 82 2 ILE engineered mutation VAL 184 1LZQ B P03367 UNP 584 84 4 3 5 4 3 5 4 anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A GLN 2 A GLN 2 A ILE 3 A ILE 3 B THR 196 B THR 96 B ASN 198 B ASN 98 A THR 96 A THR 96 A ASN 98 A ASN 98 B GLN 102 B GLN 2 B ILE 103 B ILE 3 A LEU 10 A LEU 10 A VAL 11 A VAL 11 A ALA 22 A ALA 22 A LEU 24 A LEU 24 A VAL 84 A VAL 84 A ILE 85 A ILE 85 A THR 31 A THR 31 A LEU 33 A LEU 33 A HIS 69 A HIS 69 A VAL 77 A VAL 77 A GLY 52 A GLY 52 A ILE 66 A ILE 66 A ILE 13 A ILE 13 A ILE 15 A ILE 15 A GLN 18 A GLN 18 A LEU 19 A LEU 19 A THR 31 A THR 31 A LEU 33 A LEU 33 A HIS 69 A HIS 69 A VAL 77 A VAL 77 A GLY 52 A GLY 52 A ILE 66 A ILE 66 A LYS 43 A LYS 43 A GLY 49 A GLY 49 B LEU 110 B LEU 10 B VAL 111 B VAL 11 B ALA 122 B ALA 22 B LEU 124 B LEU 24 B VAL 184 B VAL 84 B ILE 185 B ILE 85 B THR 131 B THR 31 B LEU 133 B LEU 33 B HIS 169 B HIS 69 B VAL 177 B VAL 77 B GLY 152 B GLY 52 B ILE 166 B ILE 66 B ILE 113 B ILE 13 B ILE 115 B ILE 15 B GLN 118 B GLN 18 B LEU 119 B LEU 19 B THR 131 B THR 31 B LEU 133 B LEU 33 B HIS 169 B HIS 69 B VAL 177 B VAL 77 B GLY 152 B GLY 52 B ILE 166 B ILE 66 B LYS 143 B LYS 43 B GLY 149 B GLY 49 BINDING SITE FOR RESIDUE 0ZQ A 201 A 0ZQ 201 Software 29 BINDING SITE FOR RESIDUE BME A 387 A BME 387 Software 4 A ARG 8 A ARG 8 29 1_555 A ASP 25 A ASP 25 29 1_555 A GLY 27 A GLY 27 29 1_555 A ALA 28 A ALA 28 29 1_555 A ASP 29 A ASP 29 29 1_555 A ASP 30 A ASP 30 29 1_555 A VAL 32 A VAL 32 29 1_555 A ILE 47 A ILE 47 29 1_555 A GLY 48 A GLY 48 29 1_555 A GLY 49 A GLY 49 29 1_555 A ILE 50 A ILE 50 29 1_555 A PRO 81 A PRO 81 29 1_555 A THR 82 A THR 82 29 1_555 A HOH 370 E HOH 29 1_555 B ARG 108 B ARG 8 29 1_555 B ASP 125 B ASP 25 29 1_555 B GLY 127 B GLY 27 29 1_555 B ALA 128 B ALA 28 29 1_555 B ASP 129 B ASP 29 29 1_555 B ASP 130 B ASP 30 29 1_555 B VAL 132 B VAL 32 29 1_555 B ILE 147 B ILE 47 29 1_555 B GLY 148 B GLY 48 29 1_555 B GLY 149 B GLY 49 29 1_555 B ILE 150 B ILE 50 29 1_555 B PRO 181 B PRO 81 29 1_555 B THR 182 B THR 82 29 1_555 B HOH 319 F HOH 29 1_555 B HOH 331 F HOH 29 1_555 A TRP 6 A TRP 6 4 1_555 B ASP 129 B ASP 29 4 1_555 B ARG 187 B ARG 87 4 1_555 B ASN 188 B ASN 88 4 1_555 169 hexagonal P 61