1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Capasso, C. Carginale, V. Crescenzi, O. Di Maro, D. Parisi, E. Spadaccini, R. Temussi, P.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cd 2 112.411 CADMIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 11 435 443 10.1016/S0969-2126(03)00044-3 12679021 Solution Structure of MT_nc, a Novel Metallothionein from the Antarctic Fish Notothenia coriiceps. 2003 10.2210/pdb1m0g/pdb pdb_00001m0g 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 2970.558 metallothionein MT_nc alpha domain 1 man polymer 112.411 CADMIUM ION 4 syn non-polymer metallothionein A no no SCCPCCPSGCTKCASGCVCKGKTCDTSCCQ SCCPCCPSGCTKCASGCVCKGKTCDTSCCQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n yellowbelly rockcod Notothenia Escherichia Escherichia coli sample 8208 Notothenia coriiceps 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid pCR2.1-TOPO PGEM-MT database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_conn_angle pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-05-06 1 1 2008-04-28 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1M0J contains beta domain of the same protein RCSB Y PDBJ 2002-06-13 REL REL CD CADMIUM ION all calculated structures submitted 20 20 2D NOESY 2D TOCSY E-COSY DQF-COSY [113Cd,1H]COSY 7 ambient 293 K the structures are based on a total of 373 NOEs,16 Cd-S bonds and 40 dihedral angle restraints torsion angle dynamics 1 fewest violations 2mM metallothoinein; 95% H2O, 5% D2O 95% H2O/5% D2O 2mM metallothoinein, U-113Cd; 95% H2O, 5% D2O 95% H2O/5% D2O Delaglio processing NMRPipe Johnsonn data analysis NMRView 4.0.3 Guentert structure solution DYANA 1.5 Guentert refinement DYANA 1.5 400 Bruker AVANCE 600 Bruker AVANCE CYS 39 2 CD CD 101 A CYS 49 2 CD CD 102 A CYS 55 2 CD CD 103 A CYS 65 2 CD CD 104 A SER 37 n 1 SER 37 A CYS 38 n 2 CYS 38 A CYS 39 n 3 CYS 39 A PRO 40 n 4 PRO 40 A CYS 41 n 5 CYS 41 A CYS 42 n 6 CYS 42 A PRO 43 n 7 PRO 43 A SER 44 n 8 SER 44 A GLY 45 n 9 GLY 45 A CYS 46 n 10 CYS 46 A THR 47 n 11 THR 47 A LYS 48 n 12 LYS 48 A CYS 49 n 13 CYS 49 A ALA 50 n 14 ALA 50 A SER 51 n 15 SER 51 A GLY 52 n 16 GLY 52 A CYS 53 n 17 CYS 53 A VAL 54 n 18 VAL 54 A CYS 55 n 19 CYS 55 A LYS 56 n 20 LYS 56 A GLY 57 n 21 GLY 57 A LYS 58 n 22 LYS 58 A THR 59 n 23 THR 59 A CYS 60 n 24 CYS 60 A ASP 61 n 25 ASP 61 A THR 62 n 26 THR 62 A SER 63 n 27 SER 63 A CYS 64 n 28 CYS 64 A CYS 65 n 29 CYS 65 A GLN 66 n 30 GLN 66 A author_defined_assembly 1 monomeric A CYS 38 A SG CYS 2 1_555 A CD 101 B CD CD 1_555 A CYS 39 A SG CYS 3 1_555 112.2 A CYS 38 A SG CYS 2 1_555 A CD 101 B CD CD 1_555 A CYS 49 A SG CYS 13 1_555 115.9 A CYS 39 A SG CYS 3 1_555 A CD 101 B CD CD 1_555 A CYS 49 A SG CYS 13 1_555 114.7 A CYS 38 A SG CYS 2 1_555 A CD 101 B CD CD 1_555 A CYS 53 A SG CYS 17 1_555 99.5 A CYS 39 A SG CYS 3 1_555 A CD 101 B CD CD 1_555 A CYS 53 A SG CYS 17 1_555 107.9 A CYS 49 A SG CYS 13 1_555 A CD 101 B CD CD 1_555 A CYS 53 A SG CYS 17 1_555 104.8 A CYS 39 A SG CYS 3 1_555 A CD 103 D CD CD 1_555 A CYS 41 A SG CYS 5 1_555 131.6 A CYS 39 A SG CYS 3 1_555 A CD 103 D CD CD 1_555 A CYS 42 A SG CYS 6 1_555 102.4 A CYS 41 A SG CYS 5 1_555 A CD 103 D CD CD 1_555 A CYS 42 A SG CYS 6 1_555 105.1 A CYS 39 A SG CYS 3 1_555 A CD 103 D CD CD 1_555 A CYS 55 A SG CYS 19 1_555 103.6 A CYS 41 A SG CYS 5 1_555 A CD 103 D CD CD 1_555 A CYS 55 A SG CYS 19 1_555 111.6 A CYS 42 A SG CYS 6 1_555 A CD 103 D CD CD 1_555 A CYS 55 A SG CYS 19 1_555 96.8 A CYS 42 A SG CYS 6 1_555 A CD 102 C CD CD 1_555 A CYS 46 A SG CYS 10 1_555 111.8 A CYS 42 A SG CYS 6 1_555 A CD 102 C CD CD 1_555 A CYS 49 A SG CYS 13 1_555 119.3 A CYS 46 A SG CYS 10 1_555 A CD 102 C CD CD 1_555 A CYS 49 A SG CYS 13 1_555 110.7 A CYS 42 A SG CYS 6 1_555 A CD 102 C CD CD 1_555 A CYS 65 A SG CYS 29 1_555 107.2 A CYS 46 A SG CYS 10 1_555 A CD 102 C CD CD 1_555 A CYS 65 A SG CYS 29 1_555 97.7 A CYS 49 A SG CYS 13 1_555 A CD 102 C CD CD 1_555 A CYS 65 A SG CYS 29 1_555 107.7 A CYS 55 A SG CYS 19 1_555 A CD 104 E CD CD 1_555 A CYS 60 A SG CYS 24 1_555 112.8 A CYS 55 A SG CYS 19 1_555 A CD 104 E CD CD 1_555 A CYS 64 A SG CYS 28 1_555 115.5 A CYS 60 A SG CYS 24 1_555 A CD 104 E CD CD 1_555 A CYS 64 A SG CYS 28 1_555 120.9 A CYS 55 A SG CYS 19 1_555 A CD 104 E CD CD 1_555 A CYS 65 A SG CYS 29 1_555 98.0 A CYS 60 A SG CYS 24 1_555 A CD 104 E CD CD 1_555 A CYS 65 A SG CYS 29 1_555 99.7 A CYS 64 A SG CYS 28 1_555 A CD 104 E CD CD 1_555 A CYS 65 A SG CYS 29 1_555 105.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 7 A A O H PRO GLY 43 45 1.59 9 A A O H ASP CYS 61 64 1.49 10 A A O H ASP CYS 61 64 1.53 11 A A O H ASP CYS 61 64 1.54 11 A A HZ3 O LYS CYS 48 64 1.56 17 A A O H ASP SER 61 63 1.36 18 A A O H ASP CYS 61 64 1.53 18 A A O H CYS GLN 64 66 1.58 19 A A O H ASP CYS 61 64 1.50 20 A A O H ASP SER 61 63 1.46 1 A CYS 38 -125.93 -74.61 1 A SER 44 -68.84 60.80 1 A CYS 46 46.21 98.57 1 A CYS 53 -174.43 111.03 1 A THR 59 -47.76 -95.06 1 A CYS 60 -179.56 82.60 1 A ASP 61 -125.82 -167.20 1 A CYS 64 -131.88 -79.74 2 A SER 44 -68.66 61.10 2 A CYS 46 40.37 91.91 2 A CYS 53 61.73 111.79 2 A THR 59 -84.75 -95.73 2 A CYS 60 178.28 82.89 2 A ASP 61 -126.71 -169.86 2 A CYS 64 -130.26 -79.97 3 A CYS 46 45.71 97.14 3 A THR 59 -79.71 -97.38 3 A CYS 60 179.95 81.29 3 A ASP 61 -127.33 -167.83 3 A CYS 64 -131.83 -78.93 4 A CYS 38 -128.13 -74.74 4 A SER 44 -69.30 60.12 4 A CYS 46 45.40 97.56 4 A THR 59 -58.31 -89.71 4 A CYS 60 179.21 79.08 4 A ASP 61 -126.26 -168.64 4 A CYS 64 -131.46 -80.47 5 A CYS 46 41.61 93.75 5 A CYS 53 -178.08 110.58 5 A THR 59 -48.37 -100.10 5 A CYS 60 179.84 82.27 5 A ASP 61 -125.11 -166.78 5 A CYS 64 -131.86 -79.23 6 A CYS 38 -158.41 -73.21 6 A SER 44 -69.01 63.32 6 A CYS 46 42.31 96.08 6 A CYS 53 62.16 112.67 6 A THR 59 -67.87 -89.34 6 A CYS 60 178.07 82.37 6 A ASP 61 -129.42 -168.14 6 A CYS 64 -131.13 -79.11 7 A CYS 38 -110.56 -75.66 7 A SER 44 -68.92 58.80 7 A CYS 46 36.51 89.44 7 A CYS 53 178.82 105.85 7 A THR 59 -64.78 -94.91 7 A CYS 60 179.33 88.32 7 A CYS 64 -130.52 -87.70 8 A SER 44 -68.58 63.87 8 A CYS 46 40.66 93.35 8 A CYS 53 -178.54 113.48 8 A LYS 56 -38.17 -81.70 8 A THR 59 -80.95 -96.14 8 A CYS 60 173.35 73.50 8 A CYS 64 -129.43 -78.08 9 A CYS 46 51.02 105.01 9 A CYS 53 -179.13 109.91 9 A THR 59 -84.66 -95.01 9 A CYS 60 178.30 74.24 9 A ASP 61 -118.45 -168.58 9 A CYS 65 70.69 -53.56 10 A CYS 38 -165.40 -45.07 10 A CYS 46 43.78 94.89 10 A THR 59 -85.87 -93.24 10 A CYS 60 176.16 79.52 10 A ASP 61 -123.05 -167.08 10 A CYS 65 69.30 -52.35 11 A CYS 38 -134.75 -55.82 11 A CYS 46 48.37 100.08 11 A CYS 53 62.63 116.33 11 A THR 59 -92.25 -114.78 11 A CYS 60 179.29 75.01 11 A ASP 61 -125.87 -161.22 11 A CYS 64 -125.36 -144.52 12 A CYS 38 -148.76 -73.35 12 A SER 44 -69.12 61.30 12 A CYS 46 42.60 95.69 12 A CYS 53 62.20 112.73 12 A LYS 58 -64.49 -178.13 12 A THR 59 -73.56 -86.81 12 A CYS 60 177.06 83.18 12 A ASP 61 -128.37 -169.14 12 A CYS 64 -129.24 -78.15 13 A CYS 38 -165.25 -45.46 13 A CYS 46 46.07 97.52 13 A CYS 53 -177.78 110.41 13 A THR 59 -65.97 -85.74 13 A CYS 60 178.18 78.95 13 A ASP 61 -128.01 -167.43 13 A CYS 64 -131.07 -79.41 14 A CYS 39 -172.35 140.33 14 A CYS 46 48.50 99.24 14 A CYS 53 -178.23 108.92 14 A THR 59 -48.35 -98.76 14 A CYS 60 179.99 83.46 14 A ASP 61 -126.19 -166.82 14 A CYS 64 -131.05 -83.76 15 A CYS 38 -165.32 -45.67 15 A CYS 39 -172.17 139.75 15 A CYS 46 46.46 97.50 15 A CYS 53 -48.14 108.48 15 A THR 59 -47.98 -98.09 15 A CYS 60 -179.63 83.50 15 A ASP 61 -124.80 -165.72 15 A CYS 64 -131.31 -79.35 16 A CYS 38 -52.40 -74.09 16 A SER 44 -69.28 59.99 16 A CYS 46 48.60 100.80 16 A CYS 53 -171.11 111.75 16 A THR 59 -57.88 -93.62 16 A CYS 60 179.59 79.38 16 A ASP 61 -120.14 -169.26 16 A CYS 64 -130.20 -75.38 17 A CYS 46 50.60 101.29 17 A CYS 53 -178.45 114.05 17 A THR 59 -36.06 -94.41 17 A CYS 60 140.86 101.81 17 A ASP 61 -168.46 107.39 17 A THR 62 61.76 -39.93 17 A CYS 64 -141.83 -143.32 18 A CYS 39 -172.40 141.62 18 A CYS 46 44.92 96.21 18 A CYS 53 -47.10 109.48 18 A THR 59 -51.10 -90.57 18 A CYS 60 177.67 75.69 18 A ASP 61 -119.21 -167.24 18 A CYS 65 68.43 -54.01 19 A CYS 38 -136.09 -74.58 19 A SER 44 -91.23 49.88 19 A CYS 53 -178.27 111.92 19 A THR 59 -56.74 -89.86 19 A CYS 60 178.75 77.04 19 A ASP 61 -121.25 -167.53 19 A CYS 65 70.56 -54.46 20 A CYS 38 -155.15 -73.43 20 A SER 44 -69.61 59.18 20 A CYS 46 53.34 109.97 20 A THR 59 -48.97 -101.68 20 A CYS 60 148.04 90.32 20 A THR 62 63.60 -36.27 20 A CYS 64 -140.80 -141.00 Solution structure of the alpha domain of mt_nc 1 N N 2 N N 2 N N 2 N N 2 N N A CYS 46 A CYS 10 HELX_P A SER 51 A SER 15 1 1 6 A CYS 53 A CYS 17 HELX_P A GLY 57 A GLY 21 5 2 5 metalc 2.488 A CYS 38 A SG CYS 2 1_555 A CD 101 B CD CD 1_555 metalc 2.599 A CYS 39 A SG CYS 3 1_555 A CD 101 B CD CD 1_555 metalc 2.342 A CYS 39 A SG CYS 3 1_555 A CD 103 D CD CD 1_555 metalc 2.269 A CYS 41 A SG CYS 5 1_555 A CD 103 D CD CD 1_555 metalc 2.293 A CYS 42 A SG CYS 6 1_555 A CD 102 C CD CD 1_555 metalc 2.620 A CYS 42 A SG CYS 6 1_555 A CD 103 D CD CD 1_555 metalc 2.515 A CYS 46 A SG CYS 10 1_555 A CD 102 C CD CD 1_555 metalc 2.408 A CYS 49 A SG CYS 13 1_555 A CD 101 B CD CD 1_555 metalc 2.598 A CYS 49 A SG CYS 13 1_555 A CD 102 C CD CD 1_555 metalc 2.604 A CYS 53 A SG CYS 17 1_555 A CD 101 B CD CD 1_555 metalc 2.598 A CYS 55 A SG CYS 19 1_555 A CD 103 D CD CD 1_555 metalc 2.552 A CYS 55 A SG CYS 19 1_555 A CD 104 E CD CD 1_555 metalc 2.496 A CYS 60 A SG CYS 24 1_555 A CD 104 E CD CD 1_555 metalc 2.300 A CYS 64 A SG CYS 28 1_555 A CD 104 E CD CD 1_555 metalc 2.620 A CYS 65 A SG CYS 29 1_555 A CD 102 C CD CD 1_555 metalc 2.598 A CYS 65 A SG CYS 29 1_555 A CD 104 E CD CD 1_555 METAL BINDING PROTEIN Cadmium-thiolate cluster, METAL BINDING PROTEIN MTA_NOTCO UNP 1 31 P62339 SCCPCCPSGCTKCASGCVCKGKTCDTSCCQ 31 60 1M0G 37 66 P62339 A 1 1 30 BINDING SITE FOR RESIDUE CD A 101 A CD 101 Software 5 BINDING SITE FOR RESIDUE CD A 102 A CD 102 Software 5 BINDING SITE FOR RESIDUE CD A 103 A CD 103 Software 4 BINDING SITE FOR RESIDUE CD A 104 A CD 104 Software 4 A CYS 38 A CYS 2 5 1_555 A CYS 39 A CYS 3 5 1_555 A CYS 49 A CYS 13 5 1_555 A CYS 53 A CYS 17 5 1_555 A CYS 55 A CYS 19 5 1_555 A CYS 42 A CYS 6 5 1_555 A CYS 46 A CYS 10 5 1_555 A CYS 49 A CYS 13 5 1_555 A CYS 55 A CYS 19 5 1_555 A CYS 65 A CYS 29 5 1_555 A CYS 39 A CYS 3 4 1_555 A CYS 41 A CYS 5 4 1_555 A CYS 42 A CYS 6 4 1_555 A CYS 55 A CYS 19 4 1_555 A CYS 55 A CYS 19 4 1_555 A CYS 60 A CYS 24 4 1_555 A CYS 64 A CYS 28 4 1_555 A CYS 65 A CYS 29 4 1_555