0.013296
0.000000
0.000000
0.000000
0.013296
0.000000
0.000000
0.000000
0.020302
0.00000
0.00000
0.00000
Sanishvili, R.
Savchenko, A.
Skarina, T.
Edwards, A.
Joachimiak, A.
Yakunin, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
75.210
75.210
49.256
C3 H6 O3
90.078
3-HYDROXY-PROPANOIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
26039
26045
10.1074/jbc.M303867200
12732651
Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli.
2003
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
sagitally focusing monochromator, vertically focusing mirror
CCD
2001-05-15
CUSTOM-MADE
Sagitally focusing Si(111) double crystal monochromator
MAD
M
x-ray
1
0.979464
1.0
0.953732
1.0
1.03321
1.0
19-ID
APS
0.979464, 0.953732, 1.03321
SYNCHROTRON
APS BEAMLINE 19-ID
28972.488
BioH protein
1
man
polymer
90.078
3-HYDROXY-PROPANOIC ACID
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
2
syn
non-polymer
18.015
water
238
nat
water
no
yes
(MSE)NNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLAD(MSE)AEAVLQQA
PDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQT
(MSE)GTETARQDARALKKTVLALP(MSE)PEVDVLNGGLEILKTVDLRQPLQNVS(MSE)PFLRLYGYLDGLVPRKVVP
(MSE)LDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRVGS
MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLG
WSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARA
LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS
HPAEFCHLLVALKQRVGS
A
APC064
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
BioH
562
Escherichia coli
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET15b
1
2.40
48.81
VAPOR DIFFUSION, SITTING DROP
8.8
1.3M tri Na Citrate, 0.1M Tris, 15% ethylene glycol, pH 8.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
pdbx_unobs_or_zero_occ_atoms
software
software
struct_conn
repository
Initial release
Version format compliance
Advisory
Version format compliance
Advisory
Refinement description
Data collection
Derived calculations
Refinement description
1
0
2003-01-21
1
1
2008-04-28
1
2
2011-07-13
1
3
2017-10-11
1
4
2019-07-24
_software.classification
_software.name
_software.classification
_software.name
_software.version
_struct_conn.pdbx_leaving_atom_flag
Y
RCSB
Y
RCSB
2002-06-26
REL
REL
3OH
3-HYDROXY-PROPANOIC ACID
EDO
1,2-ETHANEDIOL
HOH
water
3OH
300
2
3OH
3OH
300
A
EGL
301
3
EDO
EDO
301
A
EGL
302
3
EDO
EDO
302
A
HOH
1
4
HOH
HOH
303
A
HOH
2
4
HOH
HOH
304
A
HOH
3
4
HOH
HOH
305
A
HOH
4
4
HOH
HOH
306
A
HOH
5
4
HOH
HOH
307
A
HOH
6
4
HOH
HOH
308
A
HOH
7
4
HOH
HOH
309
A
HOH
8
4
HOH
HOH
310
A
HOH
9
4
HOH
HOH
311
A
HOH
10
4
HOH
HOH
312
A
HOH
11
4
HOH
HOH
313
A
HOH
12
4
HOH
HOH
314
A
HOH
13
4
HOH
HOH
315
A
HOH
14
4
HOH
HOH
316
A
HOH
15
4
HOH
HOH
317
A
HOH
16
4
HOH
HOH
318
A
HOH
17
4
HOH
HOH
319
A
HOH
18
4
HOH
HOH
320
A
HOH
19
4
HOH
HOH
321
A
HOH
20
4
HOH
HOH
322
A
HOH
21
4
HOH
HOH
323
A
HOH
22
4
HOH
HOH
324
A
HOH
23
4
HOH
HOH
325
A
HOH
24
4
HOH
HOH
326
A
HOH
25
4
HOH
HOH
327
A
HOH
26
4
HOH
HOH
328
A
HOH
27
4
HOH
HOH
329
A
HOH
28
4
HOH
HOH
330
A
HOH
29
4
HOH
HOH
331
A
HOH
30
4
HOH
HOH
332
A
HOH
31
4
HOH
HOH
333
A
HOH
32
4
HOH
HOH
334
A
HOH
33
4
HOH
HOH
335
A
HOH
34
4
HOH
HOH
336
A
HOH
35
4
HOH
HOH
337
A
HOH
36
4
HOH
HOH
338
A
HOH
37
4
HOH
HOH
339
A
HOH
38
4
HOH
HOH
340
A
HOH
39
4
HOH
HOH
341
A
HOH
40
4
HOH
HOH
342
A
HOH
41
4
HOH
HOH
343
A
HOH
42
4
HOH
HOH
344
A
HOH
43
4
HOH
HOH
345
A
HOH
44
4
HOH
HOH
346
A
HOH
45
4
HOH
HOH
347
A
HOH
46
4
HOH
HOH
348
A
HOH
47
4
HOH
HOH
349
A
HOH
48
4
HOH
HOH
350
A
HOH
49
4
HOH
HOH
351
A
HOH
50
4
HOH
HOH
352
A
HOH
51
4
HOH
HOH
353
A
HOH
52
4
HOH
HOH
354
A
HOH
53
4
HOH
HOH
355
A
HOH
54
4
HOH
HOH
356
A
HOH
55
4
HOH
HOH
357
A
HOH
56
4
HOH
HOH
358
A
HOH
57
4
HOH
HOH
359
A
HOH
58
4
HOH
HOH
360
A
HOH
59
4
HOH
HOH
361
A
HOH
60
4
HOH
HOH
362
A
HOH
61
4
HOH
HOH
363
A
HOH
62
4
HOH
HOH
364
A
HOH
63
4
HOH
HOH
365
A
HOH
64
4
HOH
HOH
366
A
HOH
65
4
HOH
HOH
367
A
HOH
66
4
HOH
HOH
368
A
HOH
67
4
HOH
HOH
369
A
HOH
68
4
HOH
HOH
370
A
HOH
69
4
HOH
HOH
371
A
HOH
70
4
HOH
HOH
372
A
HOH
71
4
HOH
HOH
373
A
HOH
72
4
HOH
HOH
374
A
HOH
73
4
HOH
HOH
375
A
HOH
74
4
HOH
HOH
376
A
HOH
75
4
HOH
HOH
377
A
HOH
76
4
HOH
HOH
378
A
HOH
77
4
HOH
HOH
379
A
HOH
78
4
HOH
HOH
380
A
HOH
79
4
HOH
HOH
381
A
HOH
80
4
HOH
HOH
382
A
HOH
81
4
HOH
HOH
383
A
HOH
82
4
HOH
HOH
384
A
HOH
83
4
HOH
HOH
385
A
HOH
84
4
HOH
HOH
386
A
HOH
85
4
HOH
HOH
387
A
HOH
86
4
HOH
HOH
388
A
HOH
87
4
HOH
HOH
389
A
HOH
88
4
HOH
HOH
390
A
HOH
89
4
HOH
HOH
391
A
HOH
90
4
HOH
HOH
392
A
HOH
91
4
HOH
HOH
393
A
HOH
92
4
HOH
HOH
394
A
HOH
93
4
HOH
HOH
395
A
HOH
94
4
HOH
HOH
396
A
HOH
95
4
HOH
HOH
397
A
HOH
96
4
HOH
HOH
398
A
HOH
97
4
HOH
HOH
399
A
HOH
98
4
HOH
HOH
400
A
HOH
99
4
HOH
HOH
401
A
HOH
100
4
HOH
HOH
402
A
HOH
101
4
HOH
HOH
403
A
HOH
102
4
HOH
HOH
404
A
HOH
103
4
HOH
HOH
405
A
HOH
104
4
HOH
HOH
406
A
HOH
105
4
HOH
HOH
407
A
HOH
106
4
HOH
HOH
408
A
HOH
107
4
HOH
HOH
409
A
HOH
108
4
HOH
HOH
410
A
HOH
109
4
HOH
HOH
411
A
HOH
110
4
HOH
HOH
412
A
HOH
111
4
HOH
HOH
413
A
HOH
112
4
HOH
HOH
414
A
HOH
113
4
HOH
HOH
415
A
HOH
114
4
HOH
HOH
416
A
HOH
115
4
HOH
HOH
417
A
HOH
116
4
HOH
HOH
418
A
HOH
117
4
HOH
HOH
419
A
HOH
118
4
HOH
HOH
420
A
HOH
119
4
HOH
HOH
421
A
HOH
120
4
HOH
HOH
422
A
HOH
121
4
HOH
HOH
423
A
HOH
122
4
HOH
HOH
424
A
HOH
123
4
HOH
HOH
425
A
HOH
124
4
HOH
HOH
426
A
HOH
125
4
HOH
HOH
427
A
HOH
126
4
HOH
HOH
428
A
HOH
127
4
HOH
HOH
429
A
HOH
128
4
HOH
HOH
430
A
HOH
129
4
HOH
HOH
431
A
HOH
130
4
HOH
HOH
432
A
HOH
131
4
HOH
HOH
433
A
HOH
132
4
HOH
HOH
434
A
HOH
133
4
HOH
HOH
435
A
HOH
134
4
HOH
HOH
436
A
HOH
135
4
HOH
HOH
437
A
HOH
136
4
HOH
HOH
438
A
HOH
137
4
HOH
HOH
439
A
HOH
138
4
HOH
HOH
440
A
HOH
139
4
HOH
HOH
441
A
HOH
140
4
HOH
HOH
442
A
HOH
141
4
HOH
HOH
443
A
HOH
142
4
HOH
HOH
444
A
HOH
143
4
HOH
HOH
445
A
HOH
144
4
HOH
HOH
446
A
HOH
145
4
HOH
HOH
447
A
HOH
146
4
HOH
HOH
448
A
HOH
147
4
HOH
HOH
449
A
HOH
148
4
HOH
HOH
450
A
HOH
149
4
HOH
HOH
451
A
HOH
150
4
HOH
HOH
452
A
HOH
151
4
HOH
HOH
453
A
HOH
152
4
HOH
HOH
454
A
HOH
153
4
HOH
HOH
455
A
HOH
154
4
HOH
HOH
456
A
HOH
155
4
HOH
HOH
457
A
HOH
156
4
HOH
HOH
458
A
HOH
157
4
HOH
HOH
459
A
HOH
158
4
HOH
HOH
460
A
HOH
159
4
HOH
HOH
461
A
HOH
160
4
HOH
HOH
462
A
HOH
161
4
HOH
HOH
463
A
HOH
162
4
HOH
HOH
464
A
HOH
163
4
HOH
HOH
465
A
HOH
164
4
HOH
HOH
466
A
HOH
166
4
HOH
HOH
467
A
HOH
167
4
HOH
HOH
468
A
HOH
168
4
HOH
HOH
469
A
HOH
169
4
HOH
HOH
470
A
HOH
170
4
HOH
HOH
471
A
HOH
171
4
HOH
HOH
472
A
HOH
172
4
HOH
HOH
473
A
HOH
173
4
HOH
HOH
474
A
HOH
174
4
HOH
HOH
475
A
HOH
175
4
HOH
HOH
476
A
HOH
176
4
HOH
HOH
477
A
HOH
177
4
HOH
HOH
478
A
HOH
178
4
HOH
HOH
479
A
HOH
179
4
HOH
HOH
480
A
HOH
180
4
HOH
HOH
481
A
HOH
181
4
HOH
HOH
482
A
HOH
182
4
HOH
HOH
483
A
HOH
183
4
HOH
HOH
484
A
HOH
184
4
HOH
HOH
485
A
HOH
185
4
HOH
HOH
486
A
HOH
186
4
HOH
HOH
487
A
HOH
187
4
HOH
HOH
488
A
HOH
188
4
HOH
HOH
489
A
HOH
189
4
HOH
HOH
490
A
HOH
190
4
HOH
HOH
491
A
HOH
191
4
HOH
HOH
492
A
HOH
192
4
HOH
HOH
493
A
HOH
193
4
HOH
HOH
494
A
HOH
194
4
HOH
HOH
495
A
HOH
195
4
HOH
HOH
496
A
HOH
196
4
HOH
HOH
497
A
HOH
197
4
HOH
HOH
498
A
HOH
198
4
HOH
HOH
499
A
HOH
199
4
HOH
HOH
500
A
HOH
200
4
HOH
HOH
501
A
HOH
201
4
HOH
HOH
502
A
HOH
202
4
HOH
HOH
503
A
HOH
203
4
HOH
HOH
504
A
HOH
204
4
HOH
HOH
505
A
HOH
205
4
HOH
HOH
506
A
HOH
206
4
HOH
HOH
507
A
HOH
208
4
HOH
HOH
508
A
HOH
209
4
HOH
HOH
509
A
HOH
210
4
HOH
HOH
510
A
HOH
211
4
HOH
HOH
511
A
HOH
212
4
HOH
HOH
512
A
HOH
213
4
HOH
HOH
513
A
HOH
214
4
HOH
HOH
514
A
HOH
215
4
HOH
HOH
515
A
HOH
216
4
HOH
HOH
516
A
HOH
217
4
HOH
HOH
517
A
HOH
218
4
HOH
HOH
518
A
HOH
219
4
HOH
HOH
519
A
HOH
220
4
HOH
HOH
520
A
HOH
221
4
HOH
HOH
521
A
HOH
222
4
HOH
HOH
522
A
HOH
223
4
HOH
HOH
523
A
HOH
224
4
HOH
HOH
524
A
HOH
225
4
HOH
HOH
525
A
HOH
226
4
HOH
HOH
526
A
HOH
227
4
HOH
HOH
527
A
HOH
228
4
HOH
HOH
528
A
HOH
229
4
HOH
HOH
529
A
HOH
230
4
HOH
HOH
530
A
HOH
231
4
HOH
HOH
531
A
HOH
232
4
HOH
HOH
532
A
HOH
233
4
HOH
HOH
533
A
HOH
234
4
HOH
HOH
534
A
HOH
235
4
HOH
HOH
535
A
HOH
236
4
HOH
HOH
536
A
HOH
237
4
HOH
HOH
537
A
HOH
238
4
HOH
HOH
538
A
HOH
239
4
HOH
HOH
539
A
HOH
240
4
HOH
HOH
540
A
n
1
1
A
n
2
2
A
ASN
3
n
3
ASN
3
A
ILE
4
n
4
ILE
4
A
TRP
5
n
5
TRP
5
A
TRP
6
n
6
TRP
6
A
GLN
7
n
7
GLN
7
A
THR
8
n
8
THR
8
A
LYS
9
n
9
LYS
9
A
GLY
10
n
10
GLY
10
A
GLN
11
n
11
GLN
11
A
GLY
12
n
12
GLY
12
A
ASN
13
n
13
ASN
13
A
VAL
14
n
14
VAL
14
A
HIS
15
n
15
HIS
15
A
LEU
16
n
16
LEU
16
A
VAL
17
n
17
VAL
17
A
LEU
18
n
18
LEU
18
A
LEU
19
n
19
LEU
19
A
HIS
20
n
20
HIS
20
A
GLY
21
n
21
GLY
21
A
TRP
22
n
22
TRP
22
A
GLY
23
n
23
GLY
23
A
LEU
24
n
24
LEU
24
A
ASN
25
n
25
ASN
25
A
ALA
26
n
26
ALA
26
A
GLU
27
n
27
GLU
27
A
VAL
28
n
28
VAL
28
A
TRP
29
n
29
TRP
29
A
ARG
30
n
30
ARG
30
A
CYS
31
n
31
CYS
31
A
ILE
32
n
32
ILE
32
A
ASP
33
n
33
ASP
33
A
GLU
34
n
34
GLU
34
A
GLU
35
n
35
GLU
35
A
LEU
36
n
36
LEU
36
A
SER
37
n
37
SER
37
A
SER
38
n
38
SER
38
A
HIS
39
n
39
HIS
39
A
PHE
40
n
40
PHE
40
A
THR
41
n
41
THR
41
A
LEU
42
n
42
LEU
42
A
HIS
43
n
43
HIS
43
A
LEU
44
n
44
LEU
44
A
VAL
45
n
45
VAL
45
A
ASP
46
n
46
ASP
46
A
LEU
47
n
47
LEU
47
A
PRO
48
n
48
PRO
48
A
GLY
49
n
49
GLY
49
A
PHE
50
n
50
PHE
50
A
GLY
51
n
51
GLY
51
A
ARG
52
n
52
ARG
52
A
SER
53
n
53
SER
53
A
ARG
54
n
54
ARG
54
A
GLY
55
n
55
GLY
55
A
PHE
56
n
56
PHE
56
A
GLY
57
n
57
GLY
57
A
ALA
58
n
58
ALA
58
A
LEU
59
n
59
LEU
59
A
SER
60
n
60
SER
60
A
LEU
61
n
61
LEU
61
A
ALA
62
n
62
ALA
62
A
ASP
63
n
63
ASP
63
A
MSE
64
n
64
MSE
64
A
ALA
65
n
65
ALA
65
A
GLU
66
n
66
GLU
66
A
ALA
67
n
67
ALA
67
A
VAL
68
n
68
VAL
68
A
LEU
69
n
69
LEU
69
A
GLN
70
n
70
GLN
70
A
GLN
71
n
71
GLN
71
A
ALA
72
n
72
ALA
72
A
PRO
73
n
73
PRO
73
A
ASP
74
n
74
ASP
74
A
LYS
75
n
75
LYS
75
A
ALA
76
n
76
ALA
76
A
ILE
77
n
77
ILE
77
A
TRP
78
n
78
TRP
78
A
LEU
79
n
79
LEU
79
A
GLY
80
n
80
GLY
80
A
TRP
81
n
81
TRP
81
A
SER
82
n
82
SER
82
A
LEU
83
n
83
LEU
83
A
GLY
84
n
84
GLY
84
A
GLY
85
n
85
GLY
85
A
LEU
86
n
86
LEU
86
A
VAL
87
n
87
VAL
87
A
ALA
88
n
88
ALA
88
A
SER
89
n
89
SER
89
A
GLN
90
n
90
GLN
90
A
ILE
91
n
91
ILE
91
A
ALA
92
n
92
ALA
92
A
LEU
93
n
93
LEU
93
A
THR
94
n
94
THR
94
A
HIS
95
n
95
HIS
95
A
PRO
96
n
96
PRO
96
A
GLU
97
n
97
GLU
97
A
ARG
98
n
98
ARG
98
A
VAL
99
n
99
VAL
99
A
ARG
100
n
100
ARG
100
A
ALA
101
n
101
ALA
101
A
LEU
102
n
102
LEU
102
A
VAL
103
n
103
VAL
103
A
THR
104
n
104
THR
104
A
VAL
105
n
105
VAL
105
A
ALA
106
n
106
ALA
106
A
SER
107
n
107
SER
107
A
SER
108
n
108
SER
108
A
PRO
109
n
109
PRO
109
A
CYS
110
n
110
CYS
110
A
PHE
111
n
111
PHE
111
A
SER
112
n
112
SER
112
A
ALA
113
n
113
ALA
113
A
ARG
114
n
114
ARG
114
A
ASP
115
n
115
ASP
115
A
GLU
116
n
116
GLU
116
A
TRP
117
n
117
TRP
117
A
PRO
118
n
118
PRO
118
A
GLY
119
n
119
GLY
119
A
ILE
120
n
120
ILE
120
A
LYS
121
n
121
LYS
121
A
PRO
122
n
122
PRO
122
A
ASP
123
n
123
ASP
123
A
VAL
124
n
124
VAL
124
A
LEU
125
n
125
LEU
125
A
ALA
126
n
126
ALA
126
A
GLY
127
n
127
GLY
127
A
PHE
128
n
128
PHE
128
A
GLN
129
n
129
GLN
129
A
GLN
130
n
130
GLN
130
A
GLN
131
n
131
GLN
131
A
LEU
132
n
132
LEU
132
A
SER
133
n
133
SER
133
A
ASP
134
n
134
ASP
134
A
ASP
135
n
135
ASP
135
A
GLN
136
n
136
GLN
136
A
GLN
137
n
137
GLN
137
A
ARG
138
n
138
ARG
138
A
THR
139
n
139
THR
139
A
VAL
140
n
140
VAL
140
A
GLU
141
n
141
GLU
141
A
ARG
142
n
142
ARG
142
A
PHE
143
n
143
PHE
143
A
LEU
144
n
144
LEU
144
A
ALA
145
n
145
ALA
145
A
LEU
146
n
146
LEU
146
A
GLN
147
n
147
GLN
147
A
THR
148
n
148
THR
148
A
MSE
149
n
149
MSE
149
A
GLY
150
n
150
GLY
150
A
THR
151
n
151
THR
151
A
GLU
152
n
152
GLU
152
A
THR
153
n
153
THR
153
A
ALA
154
n
154
ALA
154
A
ARG
155
n
155
ARG
155
A
GLN
156
n
156
GLN
156
A
ASP
157
n
157
ASP
157
A
ALA
158
n
158
ALA
158
A
ARG
159
n
159
ARG
159
A
ALA
160
n
160
ALA
160
A
LEU
161
n
161
LEU
161
A
LYS
162
n
162
LYS
162
A
LYS
163
n
163
LYS
163
A
THR
164
n
164
THR
164
A
VAL
165
n
165
VAL
165
A
LEU
166
n
166
LEU
166
A
ALA
167
n
167
ALA
167
A
LEU
168
n
168
LEU
168
A
PRO
169
n
169
PRO
169
A
MSE
170
n
170
MSE
170
A
PRO
171
n
171
PRO
171
A
GLU
172
n
172
GLU
172
A
VAL
173
n
173
VAL
173
A
ASP
174
n
174
ASP
174
A
VAL
175
n
175
VAL
175
A
LEU
176
n
176
LEU
176
A
ASN
177
n
177
ASN
177
A
GLY
178
n
178
GLY
178
A
GLY
179
n
179
GLY
179
A
LEU
180
n
180
LEU
180
A
GLU
181
n
181
GLU
181
A
ILE
182
n
182
ILE
182
A
LEU
183
n
183
LEU
183
A
LYS
184
n
184
LYS
184
A
THR
185
n
185
THR
185
A
VAL
186
n
186
VAL
186
A
ASP
187
n
187
ASP
187
A
LEU
188
n
188
LEU
188
A
ARG
189
n
189
ARG
189
A
GLN
190
n
190
GLN
190
A
PRO
191
n
191
PRO
191
A
LEU
192
n
192
LEU
192
A
GLN
193
n
193
GLN
193
A
ASN
194
n
194
ASN
194
A
VAL
195
n
195
VAL
195
A
SER
196
n
196
SER
196
A
MSE
197
n
197
MSE
197
A
PRO
198
n
198
PRO
198
A
PHE
199
n
199
PHE
199
A
LEU
200
n
200
LEU
200
A
ARG
201
n
201
ARG
201
A
LEU
202
n
202
LEU
202
A
TYR
203
n
203
TYR
203
A
GLY
204
n
204
GLY
204
A
TYR
205
n
205
TYR
205
A
LEU
206
n
206
LEU
206
A
ASP
207
n
207
ASP
207
A
GLY
208
n
208
GLY
208
A
LEU
209
n
209
LEU
209
A
VAL
210
n
210
VAL
210
A
PRO
211
n
211
PRO
211
A
ARG
212
n
212
ARG
212
A
LYS
213
n
213
LYS
213
A
VAL
214
n
214
VAL
214
A
VAL
215
n
215
VAL
215
A
PRO
216
n
216
PRO
216
A
MSE
217
n
217
MSE
217
A
LEU
218
n
218
LEU
218
A
ASP
219
n
219
ASP
219
A
LYS
220
n
220
LYS
220
A
LEU
221
n
221
LEU
221
A
TRP
222
n
222
TRP
222
A
PRO
223
n
223
PRO
223
A
HIS
224
n
224
HIS
224
A
SER
225
n
225
SER
225
A
GLU
226
n
226
GLU
226
A
SER
227
n
227
SER
227
A
TYR
228
n
228
TYR
228
A
ILE
229
n
229
ILE
229
A
PHE
230
n
230
PHE
230
A
ALA
231
n
231
ALA
231
A
LYS
232
n
232
LYS
232
A
ALA
233
n
233
ALA
233
A
ALA
234
n
234
ALA
234
A
HIS
235
n
235
HIS
235
A
ALA
236
n
236
ALA
236
A
PRO
237
n
237
PRO
237
A
PHE
238
n
238
PHE
238
A
ILE
239
n
239
ILE
239
A
SER
240
n
240
SER
240
A
HIS
241
n
241
HIS
241
A
PRO
242
n
242
PRO
242
A
ALA
243
n
243
ALA
243
A
GLU
244
n
244
GLU
244
A
PHE
245
n
245
PHE
245
A
CYS
246
n
246
CYS
246
A
HIS
247
n
247
HIS
247
A
LEU
248
n
248
LEU
248
A
LEU
249
n
249
LEU
249
A
VAL
250
n
250
VAL
250
A
ALA
251
n
251
ALA
251
A
LEU
252
n
252
LEU
252
A
LYS
253
n
253
LYS
253
A
GLN
254
n
254
GLN
254
A
ARG
255
n
255
ARG
255
A
VAL
256
n
256
VAL
256
A
GLY
257
n
257
GLY
257
A
SER
258
n
258
SER
258
A
1.5960
-0.2217
0.2992
2.1184
-0.0851
1.7319
0.0179
0.0109
0.0518
0.0451
-0.0312
0.0583
-0.0046
-0.0260
0.0133
0.0210
0.0147
0.0092
0.0190
-0.0111
0.0393
refined
18.9707
10.8230
14.3217
X-RAY DIFFRACTION
0.9386
-0.4449
-0.1438
1.3232
-0.4501
1.1053
0.0483
0.2257
-0.0386
-0.1064
-0.0571
-0.3146
0.0521
0.3817
0.0088
0.1338
0.0224
-0.0063
0.1620
-0.0055
0.1404
refined
34.4722
2.5709
11.6658
X-RAY DIFFRACTION
1.6269
-0.3573
0.0707
1.8027
-0.1525
1.4051
0.0233
0.0193
0.0915
0.0099
-0.0147
-0.0578
-0.0585
0.0426
-0.0086
0.1710
0.0069
-0.0114
0.1592
-0.0155
0.1408
refined
22.4028
9.3391
13.2230
X-RAY DIFFRACTION
A
3
A
3
A
109
A
109
X-RAY DIFFRACTION
1
A
188
A
188
A
258
A
258
X-RAY DIFFRACTION
1
A
110
A
110
A
187
A
187
X-RAY DIFFRACTION
2
A
303
A
1
A
540
A
238
X-RAY DIFFRACTION
3
author_defined_assembly
1
monomeric
A
MSE
64
SELENOMETHIONINE
A
MSE
64
MET
A
MSE
149
SELENOMETHIONINE
A
MSE
149
MET
A
MSE
170
SELENOMETHIONINE
A
MSE
170
MET
A
MSE
197
SELENOMETHIONINE
A
MSE
197
MET
A
MSE
217
SELENOMETHIONINE
A
MSE
217
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
7
A
N
GLN
7
A
O
LEU
44
A
O
LEU
44
A
O
HIS
43
A
O
HIS
43
A
N
LEU
18
A
N
LEU
18
A
N
LEU
19
A
N
LEU
19
A
O
TRP
81
A
O
TRP
81
A
N
TRP
78
A
N
TRP
78
A
O
VAL
103
A
O
VAL
103
A
N
THR
104
A
N
THR
104
A
O
LEU
202
A
O
LEU
202
A
N
TYR
203
A
N
TYR
203
A
O
PHE
230
A
O
PHE
230
1
A
CG
GLU
116
A
CG
GLU
116
1
Y
1
A
CD
GLU
116
A
CD
GLU
116
1
Y
1
A
OE1
GLU
116
A
OE1
GLU
116
1
Y
1
A
OE2
GLU
116
A
OE2
GLU
116
1
Y
1
A
CG
LYS
121
A
CG
LYS
121
1
Y
1
A
CD
LYS
121
A
CD
LYS
121
1
Y
1
A
CE
LYS
121
A
CE
LYS
121
1
Y
1
A
NZ
LYS
121
A
NZ
LYS
121
1
Y
1
A
OD1
ASP
123
A
OD1
ASP
123
1
Y
1
A
OD2
ASP
123
A
OD2
ASP
123
1
Y
1
A
MSE
1
A
MSE
1
1
Y
1
A
ASN
2
A
ASN
2
1
Y
1
10.93
1.10
114.20
125.13
A
A
A
CA
CB
SG
CYS
CYS
CYS
31
31
31
A
A
A
N
1
3.02
0.50
120.30
123.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
54
54
54
A
A
A
N
1
3.27
0.50
120.30
123.57
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
98
98
98
N
1
5.85
0.90
118.30
124.15
A
A
A
CB
CG
OD2
ASP
ASP
ASP
135
135
135
A
A
A
N
1
9.89
1.60
110.90
120.79
A
A
A
CG1
CB
CG2
VAL
VAL
VAL
173
173
173
B
B
N
1
9.98
1.60
110.90
120.88
A
A
A
CG1
CB
CG2
VAL
VAL
VAL
195
195
195
B
B
N
1
3.08
0.50
120.30
123.38
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
201
201
201
N
1
-3.54
0.50
120.30
116.76
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
201
201
201
N
1
A
A
CB
OG
SER
SER
196
196
-0.101
0.013
1.418
1.317
N
1
A
LEU
24
-103.67
-160.66
1
A
SER
82
62.09
-118.33
1
A
CYS
110
-157.13
89.91
1
A
ASP
115
A
6.14
-96.07
1
A
ALA
234
-102.17
-131.95
15.249
-0.15
0.00
0.00
-0.15
0.00
0.30
0.972
0.952
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.18838
0.14523
0.14735
1.70
74.54
1422
30435
27141
5.0
93.85
1.933
0.062
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
0
MAD
0.099
0.102
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.70
74.54
238
2248
14
0
1996
0.022
0.021
2327
0.003
0.020
2174
1.941
1.950
3158
2.329
3.000
5079
6.629
5.000
276
19.565
15.000
455
0.143
0.200
352
0.011
0.020
2551
0.009
0.020
468
0.286
0.200
539
0.268
0.200
2506
0.098
0.200
1273
0.196
0.200
144
0.300
0.200
17
0.293
0.200
59
0.142
0.200
18
1.107
1.500
1373
1.791
2.000
2248
2.650
3.000
954
3.961
4.500
910
0.256
0.212
1.792
175
3631
10
1.63
100
1M33
34646
33538
0
0
0.075
1
16.5
3.4
96.8
1.63
1.69
1.2
2828
0.595
1
82.5
refinement
REFMAC
5.1.05
data collection
dtDisplay
data reduction
HKL-2000
refinement
CNS
data scaling
d*TREK
data reduction
d*TREK
data reduction
DTDISPLAY
data scaling
HKL-2000
phasing
CNS
BioH protein, 3-HYDROXY-PROPANOIC ACID, ETHYLENE GLYCOL
Crystal Structure of BioH at 1.7 A
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
The monomer in the asymmetric unit is a whole biological unit.
A
ASN
25
A
ASN
25
HELX_P
A
CYS
31
A
CYS
31
5
1
7
A
ILE
32
A
ILE
32
HELX_P
A
SER
38
A
SER
38
1
2
7
A
SER
60
A
SER
60
HELX_P
A
GLN
70
A
GLN
70
1
3
11
A
SER
82
A
SER
82
HELX_P
A
HIS
95
A
HIS
95
1
4
14
A
LYS
121
A
LYS
121
HELX_P
A
ARG
142
A
ARG
142
1
5
22
A
LEU
144
A
LEU
144
HELX_P
A
THR
148
A
THR
148
5
6
5
A
THR
153
A
THR
153
HELX_P
A
LEU
161
A
LEU
161
1
7
9
A
LYS
163
A
LYS
163
HELX_P
A
VAL
165
A
VAL
165
5
8
3
A
GLU
172
A
GLU
172
HELX_P
A
VAL
186
A
VAL
186
1
9
15
A
GLN
190
A
GLN
190
HELX_P
A
VAL
195
A
VAL
195
5
10
6
A
LYS
213
A
LYS
213
HELX_P
A
TRP
222
A
TRP
222
1
11
10
A
ALA
236
A
ALA
236
HELX_P
A
HIS
241
A
HIS
241
1
12
6
A
HIS
241
A
HIS
241
HELX_P
A
GLN
254
A
GLN
254
1
13
14
covale
1.780
none
A
A
SER
82
A
OG
SER
82
1_555
A
3OH
300
B
C3
3OH
1_555
covale
1.882
none
B
A
SER
82
A
OG
SER
82
1_555
A
3OH
300
B
C3
3OH
1_555
covale
1.331
both
A
ASP
63
A
C
ASP
63
1_555
A
MSE
64
A
N
MSE
64
1_555
covale
1.314
both
A
MSE
64
A
C
MSE
64
1_555
A
ALA
65
A
N
ALA
65
1_555
covale
1.342
both
A
THR
148
A
C
THR
148
1_555
A
MSE
149
A
N
MSE
149
1_555
covale
1.313
both
A
MSE
149
A
C
MSE
149
1_555
A
GLY
150
A
N
GLY
150
1_555
covale
1.327
both
A
PRO
169
A
C
PRO
169
1_555
A
MSE
170
A
N
MSE
170
1_555
covale
1.335
both
A
MSE
170
A
C
MSE
170
1_555
A
PRO
171
A
N
PRO
171
1_555
covale
1.328
both
A
SER
196
A
C
SER
196
1_555
A
MSE
197
A
N
MSE
197
1_555
covale
1.338
both
A
MSE
197
A
C
MSE
197
1_555
A
PRO
198
A
N
PRO
198
1_555
covale
1.325
both
A
A
PRO
216
A
C
PRO
216
1_555
A
MSE
217
A
N
MSE
217
1_555
covale
1.332
both
A
MSE
217
A
C
MSE
217
1_555
A
LEU
218
A
N
LEU
218
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
alpha-betta-alpha sandwich, Structural genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
BIOH_ECOLI
UNP
1
1
P13001
MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLG
WSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS
HPAEFCHLLVALKQRV
1
256
1M33
1
256
P13001
A
1
1
256
1
MET
MODIFIED RESIDUE
MSE
1
1M33
A
P13001
UNP
1
1
1
MET
MODIFIED RESIDUE
MSE
64
1M33
A
P13001
UNP
64
64
1
GLN
CONFLICT
ARG
100
1M33
A
P13001
UNP
100
100
1
PHE
CONFLICT
GLN
136
1M33
A
P13001
UNP
136
136
1
PHE
CONFLICT
TRP
81
1M33
A
P13001
UNP
143
81
1
MET
MODIFIED RESIDUE
MSE
149
1M33
A
P13001
UNP
149
149
1
LYS
CONFLICT
ARG
100
1M33
A
P13001
UNP
162
100
1
MET
MODIFIED RESIDUE
MSE
170
1M33
A
P13001
UNP
170
170
1
MET
MODIFIED RESIDUE
MSE
197
1M33
A
P13001
UNP
197
197
1
MET
MODIFIED RESIDUE
MSE
217
1M33
A
P13001
UNP
217
217
1
INSERTION
GLY
257
1M33
A
P13001
UNP
257
1
INSERTION
SER
258
1M33
A
P13001
UNP
258
7
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
TRP
6
A
TRP
6
A
LYS
9
A
LYS
9
A
THR
41
A
THR
41
A
VAL
45
A
VAL
45
A
HIS
15
A
HIS
15
A
LEU
19
A
LEU
19
A
ALA
76
A
ALA
76
A
TRP
81
A
TRP
81
A
VAL
99
A
VAL
99
A
VAL
105
A
VAL
105
A
PHE
199
A
PHE
199
A
GLY
204
A
GLY
204
A
GLU
226
A
GLU
226
A
PHE
230
A
PHE
230
BINDING SITE FOR RESIDUE 3OH A 300
Software
11
BINDING SITE FOR RESIDUE EDO A 301
Software
3
BINDING SITE FOR RESIDUE EDO A 302
Software
8
A
GLY
21
A
GLY
21
11
1_555
A
TRP
22
A
TRP
22
11
1_555
A
LEU
24
A
LEU
24
11
1_555
A
TRP
81
A
TRP
81
11
1_555
A
SER
82
A
SER
82
11
1_555
A
LEU
83
A
LEU
83
11
1_555
A
PHE
111
A
PHE
111
11
1_555
A
PHE
143
A
PHE
143
11
1_555
A
GLN
147
A
GLN
147
11
1_555
A
LEU
183
A
LEU
183
11
1_555
A
HIS
235
A
HIS
235
11
1_555
A
GLU
152
A
GLU
152
3
1_555
A
LEU
206
A
LEU
206
3
1_555
A
LYS
232
A
LYS
232
3
1_555
A
ILE
229
A
ILE
229
8
1_555
A
HIS
241
A
HIS
241
8
1_555
A
PRO
242
A
PRO
242
8
1_555
A
ALA
243
A
ALA
243
8
1_555
A
GLU
244
A
GLU
244
8
1_555
A
HOH
360
E
HOH
8
1_555
A
HOH
424
E
HOH
8
1_555
A
HOH
510
E
HOH
8
3_554
78
P 43