0.010821 0.006247 0.000000 0.000000 0.012495 0.000000 0.000000 0.000000 0.004730 0.00000 0.00000 0.00000 Chung, S.J. Verdine, G.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 92.415 92.415 211.425 C3 H7 N O2 89.093 y ALANINE L-peptide linking C5 H6 N6 O 166.141 8-AMINOGUANINE non-polymer C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C5 H11 O7 P 214.110 3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H Y 14 N N Y 15 N C N 16 N N N 17 N C N 18 N N N 19 N N N 20 N C N 21 N O Y 22 N C Y 23 N N Y 24 N C N 25 N N N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N N N 33 S C N 34 N C N 35 N O N 36 N C N 37 N C N 38 N C N 39 N N N 40 N C N 41 N N N 42 N N N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N N N 60 S C N 61 N C N 62 N O N 63 N C N 64 N C N 65 N O N 66 N N N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N N N 77 S C N 78 N C N 79 N O N 80 N C N 81 N C N 82 N O N 83 N O N 84 N O N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N CA N 93 N N N 94 R C N 95 N C N 96 N O N 97 N C N 98 N S N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N O N 108 N P N 109 N O N 110 N O N 111 N O N 112 N C N 113 R C N 114 N O N 115 S C N 116 N O N 117 N C N 118 R C Y 119 N N Y 120 N C Y 121 N N Y 122 N C Y 123 N C N 124 N N Y 125 N N Y 126 N C Y 127 N N Y 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N O N 144 N P N 145 N O N 146 N O N 147 N O N 148 N C N 149 R C N 150 N O N 151 S C N 152 N O N 153 N C N 154 R C N 155 N N N 156 N C N 157 N O N 158 N N N 159 N C N 160 N N N 161 N C N 162 N C N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N O N 178 N P N 179 N O N 180 N O N 181 N O N 182 N C N 183 R C N 184 N O N 185 S C N 186 N O N 187 N C N 188 R C Y 189 N N Y 190 N C Y 191 N N Y 192 N C N 193 N C N 194 N O N 195 N N N 196 N C N 197 N N N 198 N N Y 199 N C N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N P N 215 N O N 216 N O N 217 N O N 218 N O N 219 N C N 220 R C N 221 N O N 222 S C N 223 N C N 224 N C N 225 N O N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N O N 239 N P N 240 N O N 241 N O N 242 N O N 243 N C N 244 R C N 245 N O N 246 S C N 247 N O N 248 N C N 249 R C N 250 N N N 251 N C N 252 N O N 253 N N N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N N N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C N 299 N C N 300 N C N 301 N O N 302 N O N 303 N O N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 N C N 315 N C N 316 N O N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N N N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N O N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 S C N 352 N C N 353 N C N 354 N C N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N C N 375 N C N 376 N C N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C N 396 N C N 397 N C N 398 N C N 399 N N N 400 N O N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N S N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 N C Y 441 N C Y 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C N 447 N O N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N N N 460 S C N 461 N C N 462 N O N 463 N C N 464 N C N 465 N C N 466 N O N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N N N 477 S C N 478 N C N 479 N O N 480 N C N 481 N O N 482 N O N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N N N 491 S C N 492 N C N 493 N O N 494 R C N 495 N O N 496 N C N 497 N O N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N N N 508 S C N 509 N C N 510 N O N 511 N C Y 512 N C Y 513 N C Y 514 N C Y 515 N N Y 516 N C Y 517 N C Y 518 N C Y 519 N C Y 520 N C N 521 N O N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N N N 535 S C N 536 N C N 537 N O N 538 N C Y 539 N C Y 540 N C Y 541 N C Y 542 N C Y 543 N C Y 544 N C N 545 N O N 546 N O N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N N N 559 S C N 560 N C N 561 N O N 562 N C N 563 N C N 564 N C N 565 N O N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing Y 13 N sing Y 14 N sing N 15 N sing N 16 N sing Y 17 N doub N 18 N doub N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing Y 27 N sing Y 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing Y 125 N sing Y 126 N sing Y 127 N doub N 128 N sing Y 129 N sing Y 130 N sing Y 131 N doub N 132 N sing Y 133 N doub N 134 N sing N 135 N sing Y 136 N sing Y 137 N doub N 138 N sing Y 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing Y 198 N sing Y 199 N sing Y 200 N doub N 201 N sing Y 202 N sing N 203 N sing Y 204 N doub N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing Y 331 N sing Y 332 N doub Y 333 N doub N 334 N sing Y 335 N sing N 336 N sing Y 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N doub N 435 N sing N 436 N sing N 437 N sing N 438 N sing Y 439 N doub Y 440 N sing Y 441 N sing N 442 N sing Y 443 N doub N 444 N sing Y 445 N doub N 446 N sing Y 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N doub N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N doub N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N doub N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N doub N 504 N sing N 505 N sing N 506 N sing N 507 N sing Y 508 N doub Y 509 N sing Y 510 N sing N 511 N sing Y 512 N doub Y 513 N sing Y 514 N sing N 515 N sing Y 516 N sing Y 517 N doub N 518 N sing Y 519 N doub N 520 N sing Y 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N doub N 532 N sing N 533 N sing N 534 N sing N 535 N sing Y 536 N doub Y 537 N sing Y 538 N sing N 539 N sing Y 540 N doub N 541 N sing Y 542 N doub N 543 N sing Y 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N doub N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing UK Chem.Biol. CBOLE2 2050 1074-5521 11 1643 1649 10.1016/j.chembiol.2004.09.014 15610848 Structures of End Products Resulting from Lesion Processing by a DNA Glycosylase/Lyase 2004 10.2210/pdb1m3q/pdb pdb_00001m3q 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2001-12-15 ADSC QUANTUM 210 SINGLE WAVELENGTH M x-ray 1 0.95 1.0 A1 CHESS 0.95 SYNCHROTRON CHESS BEAMLINE A1 4635.010 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3' 1 syn polymer 4412.837 5'-D(*GP*CP*GP*TP*CP*CP*AP*(DRZ)P*GP*TP*CP*TP*AP*CP*C)-3' 1 syn polymer 35662.332 8-oxoguanine DNA glycosylase 3.2.2.- core fragment (residues 12-325) d268e 1 man polymer 40.078 CALCIUM ION 1 syn non-polymer 166.141 8-AMINOGUANINE 1 syn non-polymer 18.015 water 174 nat water no no (DG)(DG)(DT)(DA)(DG)(DA)(DC)(DC)(DT)(DG)(DG)(DA)(DC)(DG)(DC) GGTAGACCTGGACGC B polydeoxyribonucleotide no yes (DG)(DC)(DG)(DT)(DC)(DC)(DA)(DRZ)(DG)(DT)(DC)(DT)(DA)(DC)(DC) GCGTCCANGTCTACC C polydeoxyribonucleotide no no GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT KVADCICLMALDKPQAVPVEVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRP TPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGP RLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGT KVADCICLMALDKPQAVPVEVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample ogg1 9606 Homo sapiens 562 Escherichia coli Plasmid 1 2.89 57.42 VAPOR DIFFUSION, HANGING DROP 6.5 PEG 8000, calcium acetate, cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 PEG 8000 1 calcium acetate 1 cacodylate 1 -17.139 1 B 1 C 30 13.628 B_DG1:DC30_C 1 -27.165 -0.824 -0.234 0.238 -11.508 B 2 C 29 9.884 B_DG2:DC29_C 2 2.836 -0.661 -0.358 0.540 -11.383 1 20 B 3 C 28 -8.410 B_DT3:DA28_C 3 -9.606 -0.721 1.085 -0.092 -4.849 1 20 B 4 C 27 0.381 B_DA4:DT27_C 4 -8.498 -1.161 -0.020 -0.320 -1.398 1 19 B 5 C 26 -3.680 B_DG5:DC26_C 5 -8.764 -0.451 -0.199 -0.219 6.016 1 20 B 6 C 25 -7.337 B_DA6:DT25_C 6 -9.097 0.132 0.190 0.184 14.971 1 19 B 7 C 24 1.312 B_DC7:DG24_C 7 6.339 0.464 -0.355 -0.075 -7.373 1 20 B 9 C 22 3.765 B_DT9:DA22_C 8 -13.323 -0.185 -0.004 -0.058 3.928 1 19 B 10 C 21 1.738 B_DG10:DC21_C 9 -1.903 -0.123 -0.111 -0.225 6.232 1 19 B 11 C 20 -1.414 B_DG11:DC20_C 10 -8.502 0.320 0.232 -0.193 1.969 1 20 B 12 C 19 0.086 B_DA12:DT19_C 11 -13.651 -0.225 0.575 -0.310 8.304 1 19 B 13 C 18 -10.748 B_DC13:DG18_C 12 -10.168 -0.737 0.073 0.037 5.834 1 19 B 14 C 17 -3.407 B_DG14:DC17_C 13 -4.319 -1.236 0.681 -0.408 3.211 41.912 B B 1 2 0.088 C C 30 29 3.320 0.063 0.283 1.621 BB_DG1DG2:DC29DC30_CC 1 -8.199 11.530 41.138 2.259 -1.257 3.527 32.095 B B 2 3 6.479 C C 29 28 3.460 3.493 -1.227 -1.133 BB_DG2DT3:DA28DC29_CC 2 -11.912 22.093 29.655 -2.748 -0.162 3.033 43.360 B B 3 4 -7.108 C C 28 27 3.199 -5.213 -0.039 0.770 BB_DT3DA4:DT27DA28_CC 3 7.957 -10.850 42.353 1.532 0.799 3.197 32.660 B B 4 5 15.900 C C 27 26 3.303 8.836 -0.212 0.033 BB_DA4DG5:DC26DT27_CC 4 -0.363 0.654 31.472 -1.492 0.314 3.139 38.235 B B 5 6 -1.975 C C 26 25 3.105 -1.292 -0.587 0.184 BB_DG5DA6:DT25DC26_CC 5 -3.697 5.654 38.041 0.436 0.451 3.311 31.107 B B 6 7 3.737 C C 25 24 3.177 1.994 1.206 -0.220 BB_DA6DC7:DG24DT25_CC 6 5.221 -9.787 30.613 -0.792 -1.250 3.271 33.563 B B 9 10 13.356 C C 22 21 3.104 7.648 0.510 1.086 BB_DT9DG10:DC21DA22_CC 7 0.199 -0.348 32.704 0.642 -0.850 3.502 37.574 B B 10 11 7.465 C C 21 20 3.259 4.778 -1.376 0.801 BB_DG10DG11:DC20DC21_CC 8 -5.874 9.179 36.830 0.593 1.337 3.292 33.940 B B 11 12 -1.058 C C 20 19 3.284 -0.616 -0.030 -1.372 BB_DG11DA12:DT19DC20_CC 9 -3.749 6.436 33.733 -2.250 -0.555 3.108 30.687 B B 12 13 -5.875 C C 19 18 3.155 -3.091 0.019 -0.059 BB_DA12DC13:DG18DT19_CC 10 4.989 -9.483 30.133 0.475 0.913 3.326 40.264 B B 13 14 6.824 C C 18 17 3.368 4.686 0.865 0.179 BB_DC13DG14:DC17DG18_CC 11 -1.805 2.629 39.962 -0.285 -1.466 database_2 struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2004-02-17 1 1 2008-04-28 1 2 2011-07-13 1 3 2021-10-27 1 4 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1ebm is the First crystal structure of hogg1 1m3h is the Crystal structure of hogg1 endproduct RCSB Y RCSB 2002-06-28 REL REL CA CALCIUM ION ANG 8-AMINOGUANINE HOH water 1EBM PDB experimental model CA 201 4 CA CA 201 C ANG 223 5 ANG ANG 326 A HOH 90 6 HOH HOH 90 B HOH 114 6 HOH HOH 114 B HOH 46 6 HOH HOH 46 C HOH 69 6 HOH HOH 69 C HOH 104 6 HOH HOH 104 C HOH 1 6 HOH HOH 327 A HOH 2 6 HOH HOH 328 A HOH 3 6 HOH HOH 329 A HOH 4 6 HOH HOH 330 A HOH 5 6 HOH HOH 331 A HOH 6 6 HOH HOH 332 A HOH 7 6 HOH HOH 333 A HOH 8 6 HOH HOH 334 A HOH 9 6 HOH HOH 335 A HOH 10 6 HOH HOH 336 A HOH 11 6 HOH HOH 337 A HOH 12 6 HOH HOH 338 A HOH 13 6 HOH HOH 339 A HOH 14 6 HOH HOH 340 A HOH 15 6 HOH HOH 341 A HOH 16 6 HOH HOH 342 A HOH 17 6 HOH HOH 343 A HOH 18 6 HOH HOH 344 A HOH 19 6 HOH HOH 345 A HOH 20 6 HOH HOH 346 A HOH 21 6 HOH HOH 347 A HOH 22 6 HOH HOH 348 A HOH 23 6 HOH HOH 349 A HOH 24 6 HOH HOH 350 A HOH 25 6 HOH HOH 351 A HOH 26 6 HOH HOH 352 A HOH 27 6 HOH HOH 353 A HOH 28 6 HOH HOH 354 A HOH 29 6 HOH HOH 355 A HOH 30 6 HOH HOH 356 A HOH 31 6 HOH HOH 357 A HOH 32 6 HOH HOH 358 A HOH 33 6 HOH HOH 359 A HOH 34 6 HOH HOH 360 A HOH 35 6 HOH HOH 361 A HOH 36 6 HOH HOH 362 A HOH 37 6 HOH HOH 363 A HOH 38 6 HOH HOH 364 A HOH 39 6 HOH HOH 365 A HOH 40 6 HOH HOH 366 A HOH 41 6 HOH HOH 367 A HOH 42 6 HOH HOH 368 A HOH 43 6 HOH HOH 369 A HOH 44 6 HOH HOH 370 A HOH 45 6 HOH HOH 371 A HOH 47 6 HOH HOH 372 A HOH 48 6 HOH HOH 373 A HOH 49 6 HOH HOH 374 A HOH 50 6 HOH HOH 375 A HOH 51 6 HOH HOH 376 A HOH 52 6 HOH HOH 377 A HOH 53 6 HOH HOH 378 A HOH 54 6 HOH HOH 379 A HOH 55 6 HOH HOH 380 A HOH 56 6 HOH HOH 381 A HOH 57 6 HOH HOH 382 A HOH 58 6 HOH HOH 383 A HOH 59 6 HOH HOH 384 A HOH 60 6 HOH HOH 385 A HOH 61 6 HOH HOH 386 A HOH 62 6 HOH HOH 387 A HOH 63 6 HOH HOH 388 A HOH 64 6 HOH HOH 389 A HOH 65 6 HOH HOH 390 A HOH 66 6 HOH HOH 391 A HOH 67 6 HOH HOH 392 A HOH 68 6 HOH HOH 393 A HOH 70 6 HOH HOH 394 A HOH 71 6 HOH HOH 395 A HOH 72 6 HOH HOH 396 A HOH 73 6 HOH HOH 397 A HOH 74 6 HOH HOH 398 A HOH 75 6 HOH HOH 399 A HOH 76 6 HOH HOH 400 A HOH 77 6 HOH HOH 401 A HOH 78 6 HOH HOH 402 A HOH 79 6 HOH HOH 403 A HOH 80 6 HOH HOH 404 A HOH 81 6 HOH HOH 405 A HOH 82 6 HOH HOH 406 A HOH 83 6 HOH HOH 407 A HOH 84 6 HOH HOH 408 A HOH 85 6 HOH HOH 409 A HOH 86 6 HOH HOH 410 A HOH 87 6 HOH HOH 411 A HOH 88 6 HOH HOH 412 A HOH 89 6 HOH HOH 413 A HOH 91 6 HOH HOH 414 A HOH 92 6 HOH HOH 415 A HOH 93 6 HOH HOH 416 A HOH 94 6 HOH HOH 417 A HOH 95 6 HOH HOH 418 A HOH 96 6 HOH HOH 419 A HOH 97 6 HOH HOH 420 A HOH 98 6 HOH HOH 421 A HOH 99 6 HOH HOH 422 A HOH 100 6 HOH HOH 423 A HOH 101 6 HOH HOH 424 A HOH 102 6 HOH HOH 425 A HOH 103 6 HOH HOH 426 A HOH 105 6 HOH HOH 427 A HOH 106 6 HOH HOH 428 A HOH 107 6 HOH HOH 429 A HOH 108 6 HOH HOH 430 A HOH 109 6 HOH HOH 431 A HOH 110 6 HOH HOH 432 A HOH 111 6 HOH HOH 433 A HOH 112 6 HOH HOH 434 A HOH 113 6 HOH HOH 435 A HOH 115 6 HOH HOH 436 A HOH 116 6 HOH HOH 437 A HOH 117 6 HOH HOH 438 A HOH 118 6 HOH HOH 439 A HOH 119 6 HOH HOH 440 A HOH 120 6 HOH HOH 441 A HOH 121 6 HOH HOH 442 A HOH 122 6 HOH HOH 443 A HOH 123 6 HOH HOH 444 A HOH 124 6 HOH HOH 445 A HOH 125 6 HOH HOH 446 A HOH 126 6 HOH HOH 447 A HOH 127 6 HOH HOH 448 A HOH 128 6 HOH HOH 449 A HOH 129 6 HOH HOH 450 A HOH 130 6 HOH HOH 451 A HOH 131 6 HOH HOH 452 A HOH 132 6 HOH HOH 453 A HOH 133 6 HOH HOH 454 A HOH 134 6 HOH HOH 455 A HOH 135 6 HOH HOH 456 A HOH 136 6 HOH HOH 457 A HOH 137 6 HOH HOH 458 A HOH 138 6 HOH HOH 459 A HOH 139 6 HOH HOH 460 A HOH 140 6 HOH HOH 461 A HOH 141 6 HOH HOH 462 A HOH 142 6 HOH HOH 463 A HOH 143 6 HOH HOH 464 A HOH 144 6 HOH HOH 465 A HOH 145 6 HOH HOH 466 A HOH 146 6 HOH HOH 467 A HOH 147 6 HOH HOH 468 A HOH 148 6 HOH HOH 469 A HOH 149 6 HOH HOH 470 A HOH 150 6 HOH HOH 471 A HOH 151 6 HOH HOH 472 A HOH 152 6 HOH HOH 473 A HOH 153 6 HOH HOH 474 A HOH 154 6 HOH HOH 475 A HOH 155 6 HOH HOH 476 A HOH 156 6 HOH HOH 477 A HOH 157 6 HOH HOH 478 A HOH 158 6 HOH HOH 479 A HOH 159 6 HOH HOH 480 A HOH 160 6 HOH HOH 481 A HOH 161 6 HOH HOH 482 A HOH 162 6 HOH HOH 483 A HOH 163 6 HOH HOH 484 A HOH 164 6 HOH HOH 485 A HOH 165 6 HOH HOH 486 A HOH 166 6 HOH HOH 487 A HOH 167 6 HOH HOH 488 A HOH 168 6 HOH HOH 489 A HOH 169 6 HOH HOH 490 A HOH 170 6 HOH HOH 491 A HOH 171 6 HOH HOH 492 A HOH 172 6 HOH HOH 493 A HOH 173 6 HOH HOH 494 A HOH 174 6 HOH HOH 495 A G 1 n 1 DG 1 B G 2 n 2 DG 2 B T 3 n 3 DT 3 B A 4 n 4 DA 4 B G 5 n 5 DG 5 B A 6 n 6 DA 6 B C 7 n 7 DC 7 B C 8 n 8 DC 8 B T 9 n 9 DT 9 B G 10 n 10 DG 10 B G 11 n 11 DG 11 B A 12 n 12 DA 12 B C 13 n 13 DC 13 B G 14 n 14 DG 14 B C 15 n 15 DC 15 B G 16 n 1 DG 16 C C 17 n 2 DC 17 C G 18 n 3 DG 18 C T 19 n 4 DT 19 C C 20 n 5 DC 20 C C 21 n 6 DC 21 C A 22 n 7 DA 22 C DRZ 23 n 8 DRZ 23 C G 24 n 9 DG 24 C T 25 n 10 DT 25 C C 26 n 11 DC 26 C T 27 n 12 DT 27 C A 28 n 13 DA 28 C C 29 n 14 DC 29 C C 30 n 15 DC 30 C GLY 9 n 1 GLY 9 A SER 10 n 2 SER 10 A GLU 11 n 3 GLU 11 A GLY 12 n 4 GLY 12 A HIS 13 n 5 HIS 13 A ARG 14 n 6 ARG 14 A THR 15 n 7 THR 15 A LEU 16 n 8 LEU 16 A ALA 17 n 9 ALA 17 A SER 18 n 10 SER 18 A THR 19 n 11 THR 19 A PRO 20 n 12 PRO 20 A ALA 21 n 13 ALA 21 A LEU 22 n 14 LEU 22 A TRP 23 n 15 TRP 23 A ALA 24 n 16 ALA 24 A SER 25 n 17 SER 25 A ILE 26 n 18 ILE 26 A PRO 27 n 19 PRO 27 A CYS 28 n 20 CYS 28 A PRO 29 n 21 PRO 29 A ARG 30 n 22 ARG 30 A SER 31 n 23 SER 31 A GLU 32 n 24 GLU 32 A LEU 33 n 25 LEU 33 A ARG 34 n 26 ARG 34 A LEU 35 n 27 LEU 35 A ASP 36 n 28 ASP 36 A LEU 37 n 29 LEU 37 A VAL 38 n 30 VAL 38 A LEU 39 n 31 LEU 39 A PRO 40 n 32 PRO 40 A SER 41 n 33 SER 41 A GLY 42 n 34 GLY 42 A GLN 43 n 35 GLN 43 A SER 44 n 36 SER 44 A PHE 45 n 37 PHE 45 A ARG 46 n 38 ARG 46 A TRP 47 n 39 TRP 47 A ARG 48 n 40 ARG 48 A GLU 49 n 41 GLU 49 A GLN 50 n 42 GLN 50 A SER 51 n 43 SER 51 A PRO 52 n 44 PRO 52 A ALA 53 n 45 ALA 53 A HIS 54 n 46 HIS 54 A TRP 55 n 47 TRP 55 A SER 56 n 48 SER 56 A GLY 57 n 49 GLY 57 A VAL 58 n 50 VAL 58 A LEU 59 n 51 LEU 59 A ALA 60 n 52 ALA 60 A ASP 61 n 53 ASP 61 A GLN 62 n 54 GLN 62 A VAL 63 n 55 VAL 63 A TRP 64 n 56 TRP 64 A THR 65 n 57 THR 65 A LEU 66 n 58 LEU 66 A THR 67 n 59 THR 67 A GLN 68 n 60 GLN 68 A THR 69 n 61 THR 69 A GLU 70 n 62 GLU 70 A ALA 71 n 63 GLU 71 A GLN 72 n 64 GLN 72 A LEU 73 n 65 LEU 73 A HIS 74 n 66 HIS 74 A CYS 75 n 67 CYS 75 A THR 76 n 68 THR 76 A VAL 77 n 69 VAL 77 A TYR 78 n 70 TYR 78 A ARG 79 n 71 ARG 79 A n 72 80 A n 73 81 A n 74 82 A SER 83 n 75 SER 83 A ALA 84 n 76 GLN 84 A ALA 85 n 77 ALA 85 A SER 86 n 78 SER 86 A ALA 87 n 79 ARG 87 A PRO 88 n 80 PRO 88 A THR 89 n 81 THR 89 A PRO 90 n 82 PRO 90 A ASP 91 n 83 ASP 91 A GLU 92 n 84 GLU 92 A LEU 93 n 85 LEU 93 A GLU 94 n 86 GLU 94 A ALA 95 n 87 ALA 95 A VAL 96 n 88 VAL 96 A ARG 97 n 89 ARG 97 A LYS 98 n 90 LYS 98 A TYR 99 n 91 TYR 99 A PHE 100 n 92 PHE 100 A GLN 101 n 93 GLN 101 A LEU 102 n 94 LEU 102 A ASP 103 n 95 ASP 103 A VAL 104 n 96 VAL 104 A THR 105 n 97 THR 105 A LEU 106 n 98 LEU 106 A ALA 107 n 99 ALA 107 A GLN 108 n 100 GLN 108 A LEU 109 n 101 LEU 109 A TYR 110 n 102 TYR 110 A HIS 111 n 103 HIS 111 A HIS 112 n 104 HIS 112 A TRP 113 n 105 TRP 113 A GLY 114 n 106 GLY 114 A SER 115 n 107 SER 115 A VAL 116 n 108 VAL 116 A ASP 117 n 109 ASP 117 A SER 118 n 110 SER 118 A HIS 119 n 111 HIS 119 A PHE 120 n 112 PHE 120 A GLN 121 n 113 GLN 121 A ALA 122 n 114 GLU 122 A VAL 123 n 115 VAL 123 A ALA 124 n 116 ALA 124 A ALA 125 n 117 GLN 125 A LYS 126 n 118 LYS 126 A PHE 127 n 119 PHE 127 A ALA 128 n 120 GLN 128 A GLY 129 n 121 GLY 129 A VAL 130 n 122 VAL 130 A ARG 131 n 123 ARG 131 A LEU 132 n 124 LEU 132 A LEU 133 n 125 LEU 133 A ALA 134 n 126 ARG 134 A GLN 135 n 127 GLN 135 A ASP 136 n 128 ASP 136 A PRO 137 n 129 PRO 137 A ILE 138 n 130 ILE 138 A GLU 139 n 131 GLU 139 A CYS 140 n 132 CYS 140 A LEU 141 n 133 LEU 141 A PHE 142 n 134 PHE 142 A SER 143 n 135 SER 143 A PHE 144 n 136 PHE 144 A ILE 145 n 137 ILE 145 A CYS 146 n 138 CYS 146 A SER 147 n 139 SER 147 A SER 148 n 140 SER 148 A ASN 149 n 141 ASN 149 A ASN 150 n 142 ASN 150 A ASN 151 n 143 ASN 151 A ILE 152 n 144 ILE 152 A ALA 153 n 145 ALA 153 A ARG 154 n 146 ARG 154 A ILE 155 n 147 ILE 155 A THR 156 n 148 THR 156 A GLY 157 n 149 GLY 157 A MET 158 n 150 MET 158 A VAL 159 n 151 VAL 159 A GLU 160 n 152 GLU 160 A ARG 161 n 153 ARG 161 A LEU 162 n 154 LEU 162 A CYS 163 n 155 CYS 163 A ALA 164 n 156 GLN 164 A ALA 165 n 157 ALA 165 A PHE 166 n 158 PHE 166 A GLY 167 n 159 GLY 167 A PRO 168 n 160 PRO 168 A ARG 169 n 161 ARG 169 A LEU 170 n 162 LEU 170 A ILE 171 n 163 ILE 171 A GLN 172 n 164 GLN 172 A LEU 173 n 165 LEU 173 A ASP 174 n 166 ASP 174 A ASP 175 n 167 ASP 175 A VAL 176 n 168 VAL 176 A THR 177 n 169 THR 177 A TYR 178 n 170 TYR 178 A HIS 179 n 171 HIS 179 A GLY 180 n 172 GLY 180 A PHE 181 n 173 PHE 181 A PRO 182 n 174 PRO 182 A SER 183 n 175 SER 183 A LEU 184 n 176 LEU 184 A GLN 185 n 177 GLN 185 A ALA 186 n 178 ALA 186 A LEU 187 n 179 LEU 187 A ALA 188 n 180 ALA 188 A GLY 189 n 181 GLY 189 A PRO 190 n 182 PRO 190 A GLU 191 n 183 GLU 191 A VAL 192 n 184 VAL 192 A GLU 193 n 185 GLU 193 A ALA 194 n 186 ALA 194 A HIS 195 n 187 HIS 195 A LEU 196 n 188 LEU 196 A ARG 197 n 189 ARG 197 A LYS 198 n 190 LYS 198 A LEU 199 n 191 LEU 199 A GLY 200 n 192 GLY 200 A LEU 201 n 193 LEU 201 A GLY 202 n 194 GLY 202 A TYR 203 n 195 TYR 203 A ARG 204 n 196 ARG 204 A ALA 205 n 197 ALA 205 A ARG 206 n 198 ARG 206 A TYR 207 n 199 TYR 207 A VAL 208 n 200 VAL 208 A SER 209 n 201 SER 209 A ALA 210 n 202 ALA 210 A SER 211 n 203 SER 211 A ALA 212 n 204 ALA 212 A ARG 213 n 205 ARG 213 A ALA 214 n 206 ALA 214 A ILE 215 n 207 ILE 215 A LEU 216 n 208 LEU 216 A GLU 217 n 209 GLU 217 A GLU 218 n 210 GLU 218 A GLN 219 n 211 GLN 219 A GLY 220 n 212 GLY 220 A GLY 221 n 213 GLY 221 A LEU 222 n 214 LEU 222 A ALA 223 n 215 ALA 223 A TRP 224 n 216 TRP 224 A LEU 225 n 217 LEU 225 A GLN 226 n 218 GLN 226 A ALA 227 n 219 GLN 227 A LEU 228 n 220 LEU 228 A ARG 229 n 221 ARG 229 A GLU 230 n 222 GLU 230 A SER 231 n 223 SER 231 A SER 232 n 224 SER 232 A TYR 233 n 225 TYR 233 A GLU 234 n 226 GLU 234 A GLU 235 n 227 GLU 235 A ALA 236 n 228 ALA 236 A HIS 237 n 229 HIS 237 A LYS 238 n 230 LYS 238 A ALA 239 n 231 ALA 239 A LEU 240 n 232 LEU 240 A CYS 241 n 233 CYS 241 A ILE 242 n 234 ILE 242 A LEU 243 n 235 LEU 243 A PRO 244 n 236 PRO 244 A GLY 245 n 237 GLY 245 A VAL 246 n 238 VAL 246 A GLY 247 n 239 GLY 247 A THR 248 n 240 THR 248 A LYS 249 n 241 LYS 249 A VAL 250 n 242 VAL 250 A ALA 251 n 243 ALA 251 A ASP 252 n 244 ASP 252 A CYS 253 n 245 CYS 253 A ILE 254 n 246 ILE 254 A CYS 255 n 247 CYS 255 A LEU 256 n 248 LEU 256 A MET 257 n 249 MET 257 A ALA 258 n 250 ALA 258 A LEU 259 n 251 LEU 259 A ASP 260 n 252 ASP 260 A LYS 261 n 253 LYS 261 A PRO 262 n 254 PRO 262 A GLN 263 n 255 GLN 263 A ALA 264 n 256 ALA 264 A VAL 265 n 257 VAL 265 A PRO 266 n 258 PRO 266 A VAL 267 n 259 VAL 267 A GLU 268 n 260 GLU 268 A VAL 269 n 261 VAL 269 A HIS 270 n 262 HIS 270 A MET 271 n 263 MET 271 A TRP 272 n 264 TRP 272 A HIS 273 n 265 HIS 273 A ILE 274 n 266 ILE 274 A ALA 275 n 267 ALA 275 A GLN 276 n 268 GLN 276 A ARG 277 n 269 ARG 277 A ASP 278 n 270 ASP 278 A TYR 279 n 271 TYR 279 A SER 280 n 272 SER 280 A TRP 281 n 273 TRP 281 A HIS 282 n 274 HIS 282 A PRO 283 n 275 PRO 283 A THR 284 n 276 THR 284 A THR 285 n 277 THR 285 A ALA 286 n 278 SER 286 A GLN 287 n 279 GLN 287 A ALA 288 n 280 ALA 288 A ALA 289 n 281 LYS 289 A GLY 290 n 282 GLY 290 A PRO 291 n 283 PRO 291 A SER 292 n 284 SER 292 A PRO 293 n 285 PRO 293 A ALA 294 n 286 GLN 294 A THR 295 n 287 THR 295 A ASN 296 n 288 ASN 296 A LYS 297 n 289 LYS 297 A GLU 298 n 290 GLU 298 A LEU 299 n 291 LEU 299 A GLY 300 n 292 GLY 300 A ASN 301 n 293 ASN 301 A PHE 302 n 294 PHE 302 A PHE 303 n 295 PHE 303 A ARG 304 n 296 ARG 304 A SER 305 n 297 SER 305 A LEU 306 n 298 LEU 306 A TRP 307 n 299 TRP 307 A GLY 308 n 300 GLY 308 A PRO 309 n 301 PRO 309 A TYR 310 n 302 TYR 310 A ALA 311 n 303 ALA 311 A GLY 312 n 304 GLY 312 A TRP 313 n 305 TRP 313 A ALA 314 n 306 ALA 314 A GLN 315 n 307 GLN 315 A ALA 316 n 308 ALA 316 A VAL 317 n 309 VAL 317 A LEU 318 n 310 LEU 318 A PHE 319 n 311 PHE 319 A SER 320 n 312 SER 320 A ALA 321 n 313 ALA 321 A ASP 322 n 314 ASP 322 A LEU 323 n 315 LEU 323 A ARG 324 n 316 ARG 324 A ALA 325 n 317 GLN 325 A author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 24 C N ALA 16 A O CYS 75 C O CYS 67 A O HIS 74 C O HIS 66 A N THR 67 C N THR 59 A O LEU 66 C O LEU 58 A N TRP 55 C N TRP 47 A O SER 56 C O SER 48 A N ARG 48 C N ARG 40 A N LEU 173 C N LEU 165 A O VAL 176 C O VAL 168 1 A CG GLU 71 C CG GLU 63 1 Y 1 A CD GLU 71 C CD GLU 63 1 Y 1 A OE1 GLU 71 C OE1 GLU 63 1 Y 1 A OE2 GLU 71 C OE2 GLU 63 1 Y 1 A CG GLN 84 C CG GLN 76 1 Y 1 A CD GLN 84 C CD GLN 76 1 Y 1 A OE1 GLN 84 C OE1 GLN 76 1 Y 1 A NE2 GLN 84 C NE2 GLN 76 1 Y 1 A CG ARG 87 C CG ARG 79 1 Y 1 A CD ARG 87 C CD ARG 79 1 Y 1 A NE ARG 87 C NE ARG 79 1 Y 1 A CZ ARG 87 C CZ ARG 79 1 Y 1 A NH1 ARG 87 C NH1 ARG 79 1 Y 1 A NH2 ARG 87 C NH2 ARG 79 1 Y 1 A CG GLU 122 C CG GLU 114 1 Y 1 A CD GLU 122 C CD GLU 114 1 Y 1 A OE1 GLU 122 C OE1 GLU 114 1 Y 1 A OE2 GLU 122 C OE2 GLU 114 1 Y 1 A CG GLN 125 C CG GLN 117 1 Y 1 A CD GLN 125 C CD GLN 117 1 Y 1 A OE1 GLN 125 C OE1 GLN 117 1 Y 1 A NE2 GLN 125 C NE2 GLN 117 1 Y 1 A CG GLN 128 C CG GLN 120 1 Y 1 A CD GLN 128 C CD GLN 120 1 Y 1 A OE1 GLN 128 C OE1 GLN 120 1 Y 1 A NE2 GLN 128 C NE2 GLN 120 1 Y 1 A CG ARG 134 C CG ARG 126 1 Y 1 A CD ARG 134 C CD ARG 126 1 Y 1 A NE ARG 134 C NE ARG 126 1 Y 1 A CZ ARG 134 C CZ ARG 126 1 Y 1 A NH1 ARG 134 C NH1 ARG 126 1 Y 1 A NH2 ARG 134 C NH2 ARG 126 1 Y 1 A CG GLN 164 C CG GLN 156 1 Y 1 A CD GLN 164 C CD GLN 156 1 Y 1 A OE1 GLN 164 C OE1 GLN 156 1 Y 1 A NE2 GLN 164 C NE2 GLN 156 1 Y 1 A CG GLN 227 C CG GLN 219 1 Y 1 A CD GLN 227 C CD GLN 219 1 Y 1 A OE1 GLN 227 C OE1 GLN 219 1 Y 1 A NE2 GLN 227 C NE2 GLN 219 1 Y 1 A OG SER 286 C OG SER 278 1 Y 1 A CG LYS 289 C CG LYS 281 1 Y 1 A CD LYS 289 C CD LYS 281 1 Y 1 A CE LYS 289 C CE LYS 281 1 Y 1 A NZ LYS 289 C NZ LYS 281 1 Y 1 A CG GLN 294 C CG GLN 286 1 Y 1 A CD GLN 294 C CD GLN 286 1 Y 1 A OE1 GLN 294 C OE1 GLN 286 1 Y 1 A NE2 GLN 294 C NE2 GLN 286 1 Y 1 A CG GLN 325 C CG GLN 317 1 Y 1 A CD GLN 325 C CD GLN 317 1 Y 1 A OE1 GLN 325 C OE1 GLN 317 1 Y 1 A NE2 GLN 325 C NE2 GLN 317 1 Y 1 A GLY 80 C GLY 72 1 Y 1 A ASP 81 C ASP 73 1 Y 1 A LYS 82 C LYS 74 1 Y 1 29.23 1.20 119.70 148.93 C C C C3' O3' P DRZ DRZ DG 23 23 24 Y 1 B B O3' O3' DC DC 15 15 1.83 1_555 11_655 1 A CYS 28 -170.87 103.80 1 A GLN 43 -95.25 -61.58 1 A LEU 170 -100.68 -89.51 1 A ASP 174 57.62 -129.78 1 A THR 284 -124.18 -51.04 PROTEIN_REP.PARAM PROTEIN.TOP DNA-RNA_REP.PARAM DNA-RNA.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP SJC_D SJC_D 41.6 3.55 2.42 0.00 3.55 0.00 -7.10 0.2675 0.004 0.235 1.90 37.43 3828 42940 37734 10.1 87.8 RANDOM 287857.55 1 RESTRAINED THROUGHOUT 2.0 FOURIER SYNTHESIS 1EBM Engh & Huber FLAT MODEL 47.0295 0.367594 0.31 0.26 5.0 0.25 0.22 1.90 37.43 174 3226 13 599 2440 0.006 1.2 21.1 0.90 1.36 1.50 2.09 2.00 1.89 2.00 2.78 2.50 0.315 0.014 0.286 2.02 509 4283 6 10.6 68.4 19.3 1.90 50.0 1M3Q 42940 42784 -3 0.067 1 99.4 99.6 0.47 1.90 1.97 2.30 4166 4.45 99.1 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS Crystal Structure of hogg1 D268E Mutant with Base-Excised DNA and 8-aminoguanine 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N A THR 19 C THR 11 HELX_P A TRP 23 C TRP 15 5 1 5 A ARG 34 C ARG 26 HELX_P A LEU 39 C LEU 31 1 2 6 A THR 89 C THR 81 HELX_P A PHE 100 C PHE 92 1 3 12 A THR 105 C THR 97 HELX_P A ASP 117 C ASP 109 1 4 13 A ASP 136 C ASP 128 HELX_P A SER 148 C SER 140 1 5 13 A ASN 151 C ASN 143 HELX_P A CYS 163 C CYS 155 1 6 13 A ALA 165 C ALA 157 HELX_P A GLY 167 C GLY 159 5 7 3 A SER 183 C SER 175 HELX_P A ALA 188 C ALA 180 1 8 6 A GLU 191 C GLU 183 HELX_P A LEU 199 C LEU 191 1 9 9 A TYR 203 C TYR 195 HELX_P A GLU 218 C GLU 210 1 10 16 A GLY 221 C GLY 213 HELX_P A GLN 226 C GLN 218 1 11 6 A SER 232 C SER 224 HELX_P A CYS 241 C CYS 233 1 12 10 A GLY 247 C GLY 239 HELX_P A LEU 259 C LEU 251 1 13 13 A GLU 268 C GLU 260 HELX_P A SER 280 C SER 272 1 14 13 A THR 295 C THR 287 HELX_P A GLY 308 C GLY 300 1 15 14 A TYR 310 C TYR 302 HELX_P A ARG 324 C ARG 316 1 16 15 covale 1.598 both C DA 22 B O3' DA 7 1_555 C DRZ 23 B P DRZ 8 1_555 covale 1.613 both C DRZ 23 B O3' DRZ 8 1_555 C DG 24 B P DG 9 1_555 metalc 3.084 C DA 22 B OP2 DA 7 1_555 C CA 201 D CA CA 1_555 hydrog DG-DC PAIR B DG 1 A N1 DG 1 1_555 C DC 30 B N3 DC 15 1_555 hydrog DG-DC PAIR B DG 2 A N2 DG 2 1_555 C DC 29 B O2 DC 14 1_555 hydrog WATSON-CRICK B DT 3 A N3 DT 3 1_555 C DA 28 B N1 DA 13 1_555 hydrog WATSON-CRICK B DT 3 A O4 DT 3 1_555 C DA 28 B N6 DA 13 1_555 hydrog WATSON-CRICK B DA 4 A N1 DA 4 1_555 C DT 27 B N3 DT 12 1_555 hydrog WATSON-CRICK B DA 4 A N6 DA 4 1_555 C DT 27 B O4 DT 12 1_555 hydrog WATSON-CRICK B DG 5 A N1 DG 5 1_555 C DC 26 B N3 DC 11 1_555 hydrog WATSON-CRICK B DG 5 A N2 DG 5 1_555 C DC 26 B O2 DC 11 1_555 hydrog WATSON-CRICK B DG 5 A O6 DG 5 1_555 C DC 26 B N4 DC 11 1_555 hydrog WATSON-CRICK B DA 6 A N1 DA 6 1_555 C DT 25 B N3 DT 10 1_555 hydrog WATSON-CRICK B DA 6 A N6 DA 6 1_555 C DT 25 B O4 DT 10 1_555 hydrog WATSON-CRICK B DC 7 A N3 DC 7 1_555 C DG 24 B N1 DG 9 1_555 hydrog WATSON-CRICK B DC 7 A N4 DC 7 1_555 C DG 24 B O6 DG 9 1_555 hydrog WATSON-CRICK B DC 7 A O2 DC 7 1_555 C DG 24 B N2 DG 9 1_555 hydrog WATSON-CRICK B DT 9 A N3 DT 9 1_555 C DA 22 B N1 DA 7 1_555 hydrog WATSON-CRICK B DT 9 A O4 DT 9 1_555 C DA 22 B N6 DA 7 1_555 hydrog WATSON-CRICK B DG 10 A N1 DG 10 1_555 C DC 21 B N3 DC 6 1_555 hydrog WATSON-CRICK B DG 10 A N2 DG 10 1_555 C DC 21 B O2 DC 6 1_555 hydrog WATSON-CRICK B DG 10 A O6 DG 10 1_555 C DC 21 B N4 DC 6 1_555 hydrog WATSON-CRICK B DG 11 A N1 DG 11 1_555 C DC 20 B N3 DC 5 1_555 hydrog WATSON-CRICK B DG 11 A N2 DG 11 1_555 C DC 20 B O2 DC 5 1_555 hydrog WATSON-CRICK B DG 11 A O6 DG 11 1_555 C DC 20 B N4 DC 5 1_555 hydrog WATSON-CRICK B DA 12 A N1 DA 12 1_555 C DT 19 B N3 DT 4 1_555 hydrog WATSON-CRICK B DA 12 A N6 DA 12 1_555 C DT 19 B O4 DT 4 1_555 hydrog WATSON-CRICK B DC 13 A N3 DC 13 1_555 C DG 18 B N1 DG 3 1_555 hydrog WATSON-CRICK B DC 13 A N4 DC 13 1_555 C DG 18 B O6 DG 3 1_555 hydrog WATSON-CRICK B DC 13 A O2 DC 13 1_555 C DG 18 B N2 DG 3 1_555 hydrog WATSON-CRICK B DG 14 A N1 DG 14 1_555 C DC 17 B N3 DC 2 1_555 hydrog WATSON-CRICK B DG 14 A N2 DG 14 1_555 C DC 17 B O2 DC 2 1_555 hydrog WATSON-CRICK B DG 14 A O6 DG 14 1_555 C DC 17 B N4 DC 2 1_555 HYDROLASE/DNA 8-oxoguanine, DNA glycosylase, DNA repair, end product, hogg, 8-aminoguanine, re-ligation, HYDROLASE-DNA COMPLEX OGG1_HUMAN UNP 3 12 O15527 GHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPD ELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLI QLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKVA DCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ 1M3Q PDB 1 1M3Q 1M3Q PDB 2 1M3Q 12 325 1M3Q 12 325 O15527 A 1 4 317 1 15 1M3Q 1 15 1M3Q B 2 1 15 16 30 1M3Q 16 30 1M3Q C 3 1 15 1 cloning artifact GLY 9 1M3Q A O15527 UNP 1 1 cloning artifact SER 10 1M3Q A O15527 UNP 2 1 cloning artifact GLU 11 1M3Q A O15527 UNP 3 1 ASP engineered mutation GLU 268 1M3Q A O15527 UNP 268 260 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ALA 24 C ALA 16 A ILE 26 C ILE 18 A LEU 73 C LEU 65 A TYR 78 C TYR 70 A GLN 62 C GLN 54 A GLN 68 C GLN 60 A HIS 54 C HIS 46 A LEU 59 C LEU 51 A ARG 48 C ARG 40 A SER 51 C SER 43 A ARG 169 C ARG 161 A LEU 173 C LEU 165 A VAL 176 C VAL 168 A HIS 179 C HIS 171 BINDING SITE FOR RESIDUE CA C 201 C CA 201 Software 1 BINDING SITE FOR RESIDUE ANG A 326 A ANG 326 Software 11 C DA 22 B DA 7 1 1_555 A GLY 42 C GLY 34 11 1_555 A PHE 45 C PHE 37 11 1_555 A PHE 144 C PHE 136 11 1_555 A LYS 249 C LYS 241 11 1_555 A PRO 266 C PRO 258 11 1_555 A GLU 268 C GLU 260 11 1_555 A GLN 315 C GLN 307 11 1_555 A PHE 319 C PHE 311 11 1_555 A HOH 381 H HOH 11 1_555 A HOH 403 H HOH 11 1_555 C DRZ 23 B DRZ 8 11 1_555 179 P 65 2 2