1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Pornillos, O.
Alam, S.L.
Davis, D.R.
Sundquist, W.I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
9
812
817
12379843
Structure of the Tsg101 UEV domain in complex with the PTAP motif of the HIV-1 p6 protein
2002
10.2210/pdb1m4q/pdb
pdb_00001m4q
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
16633.352
Tumor Susceptibility gene 101 protein
1
man
polymer
965.997
Gag Polyprotein
1
man
polymer
no
no
MAVSESQLKKMVSKYKYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTY
PYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVFSRP
MAVSESQLKKMVSKYKYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTY
PYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVFSRP
A
polypeptide(L)
no
no
PEPTAPPEE
PEPTAPPEE
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
Tumor Susceptibility gene 101
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET11d
Lentivirus
NL4-3
Escherichia
Escherichia coli
sample
Gag
11676
Human immunodeficiency virus 1
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pAED4
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2002-11-06
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Structure of the Tsg101 UEV domain
Structure of the Tsg101 UEV domain
Structure of the Tsg101 UEV domain in complex with a HIV-1 PTAP "late domain" peptide
RCSB
Y
RCSB
2002-07-03
REL
structures with the lowest energy
200
20
200 structures were calculated with DYANA; best 20 regularized with CNS
torsion angle dynamics distance geometry simulated annealing
8
lowest energy
structure solution
DYANA
refinement
CNS
600
Varian
INOVA
n
1
1
A
ALA
2
n
2
ALA
2
A
VAL
3
n
3
VAL
3
A
SER
4
n
4
SER
4
A
GLU
5
n
5
GLU
5
A
SER
6
n
6
SER
6
A
GLN
7
n
7
GLN
7
A
LEU
8
n
8
LEU
8
A
LYS
9
n
9
LYS
9
A
LYS
10
n
10
LYS
10
A
MET
11
n
11
MET
11
A
VAL
12
n
12
VAL
12
A
SER
13
n
13
SER
13
A
LYS
14
n
14
LYS
14
A
TYR
15
n
15
TYR
15
A
LYS
16
n
16
LYS
16
A
TYR
17
n
17
TYR
17
A
ARG
18
n
18
ARG
18
A
ASP
19
n
19
ASP
19
A
LEU
20
n
20
LEU
20
A
THR
21
n
21
THR
21
A
VAL
22
n
22
VAL
22
A
ARG
23
n
23
ARG
23
A
GLU
24
n
24
GLU
24
A
THR
25
n
25
THR
25
A
VAL
26
n
26
VAL
26
A
ASN
27
n
27
ASN
27
A
VAL
28
n
28
VAL
28
A
ILE
29
n
29
ILE
29
A
THR
30
n
30
THR
30
A
LEU
31
n
31
LEU
31
A
TYR
32
n
32
TYR
32
A
LYS
33
n
33
LYS
33
A
ASP
34
n
34
ASP
34
A
LEU
35
n
35
LEU
35
A
LYS
36
n
36
LYS
36
A
PRO
37
n
37
PRO
37
A
VAL
38
n
38
VAL
38
A
LEU
39
n
39
LEU
39
A
ASP
40
n
40
ASP
40
A
SER
41
n
41
SER
41
A
TYR
42
n
42
TYR
42
A
VAL
43
n
43
VAL
43
A
PHE
44
n
44
PHE
44
A
ASN
45
n
45
ASN
45
A
ASP
46
n
46
ASP
46
A
GLY
47
n
47
GLY
47
A
SER
48
n
48
SER
48
A
SER
49
n
49
SER
49
A
ARG
50
n
50
ARG
50
A
GLU
51
n
51
GLU
51
A
LEU
52
n
52
LEU
52
A
MET
53
n
53
MET
53
A
ASN
54
n
54
ASN
54
A
LEU
55
n
55
LEU
55
A
THR
56
n
56
THR
56
A
GLY
57
n
57
GLY
57
A
THR
58
n
58
THR
58
A
ILE
59
n
59
ILE
59
A
PRO
60
n
60
PRO
60
A
VAL
61
n
61
VAL
61
A
PRO
62
n
62
PRO
62
A
TYR
63
n
63
TYR
63
A
ARG
64
n
64
ARG
64
A
GLY
65
n
65
GLY
65
A
ASN
66
n
66
ASN
66
A
THR
67
n
67
THR
67
A
TYR
68
n
68
TYR
68
A
ASN
69
n
69
ASN
69
A
ILE
70
n
70
ILE
70
A
PRO
71
n
71
PRO
71
A
ILE
72
n
72
ILE
72
A
CYS
73
n
73
CYS
73
A
LEU
74
n
74
LEU
74
A
TRP
75
n
75
TRP
75
A
LEU
76
n
76
LEU
76
A
LEU
77
n
77
LEU
77
A
ASP
78
n
78
ASP
78
A
THR
79
n
79
THR
79
A
TYR
80
n
80
TYR
80
A
PRO
81
n
81
PRO
81
A
TYR
82
n
82
TYR
82
A
ASN
83
n
83
ASN
83
A
PRO
84
n
84
PRO
84
A
PRO
85
n
85
PRO
85
A
ILE
86
n
86
ILE
86
A
CYS
87
n
87
CYS
87
A
PHE
88
n
88
PHE
88
A
VAL
89
n
89
VAL
89
A
LYS
90
n
90
LYS
90
A
PRO
91
n
91
PRO
91
A
THR
92
n
92
THR
92
A
SER
93
n
93
SER
93
A
SER
94
n
94
SER
94
A
MET
95
n
95
MET
95
A
THR
96
n
96
THR
96
A
ILE
97
n
97
ILE
97
A
LYS
98
n
98
LYS
98
A
THR
99
n
99
THR
99
A
GLY
100
n
100
GLY
100
A
LYS
101
n
101
LYS
101
A
HIS
102
n
102
HIS
102
A
VAL
103
n
103
VAL
103
A
ASP
104
n
104
ASP
104
A
ALA
105
n
105
ALA
105
A
ASN
106
n
106
ASN
106
A
GLY
107
n
107
GLY
107
A
LYS
108
n
108
LYS
108
A
ILE
109
n
109
ILE
109
A
TYR
110
n
110
TYR
110
A
LEU
111
n
111
LEU
111
A
PRO
112
n
112
PRO
112
A
TYR
113
n
113
TYR
113
A
LEU
114
n
114
LEU
114
A
HIS
115
n
115
HIS
115
A
GLU
116
n
116
GLU
116
A
TRP
117
n
117
TRP
117
A
LYS
118
n
118
LYS
118
A
HIS
119
n
119
HIS
119
A
PRO
120
n
120
PRO
120
A
GLN
121
n
121
GLN
121
A
SER
122
n
122
SER
122
A
ASP
123
n
123
ASP
123
A
LEU
124
n
124
LEU
124
A
LEU
125
n
125
LEU
125
A
GLY
126
n
126
GLY
126
A
LEU
127
n
127
LEU
127
A
ILE
128
n
128
ILE
128
A
GLN
129
n
129
GLN
129
A
VAL
130
n
130
VAL
130
A
MET
131
n
131
MET
131
A
ILE
132
n
132
ILE
132
A
VAL
133
n
133
VAL
133
A
VAL
134
n
134
VAL
134
A
PHE
135
n
135
PHE
135
A
GLY
136
n
136
GLY
136
A
ASP
137
n
137
ASP
137
A
GLU
138
n
138
GLU
138
A
PRO
139
n
139
PRO
139
A
PRO
140
n
140
PRO
140
A
VAL
141
n
141
VAL
141
A
PHE
142
n
142
PHE
142
A
SER
143
n
143
SER
143
A
ARG
144
n
144
ARG
144
A
PRO
145
n
145
PRO
145
A
PRO
205
n
1
PRO
205
B
GLU
206
n
2
GLU
206
B
PRO
207
n
3
PRO
207
B
THR
208
n
4
THR
208
B
ALA
209
n
5
ALA
209
B
PRO
210
n
6
PRO
210
B
PRO
211
n
7
PRO
211
B
GLU
212
n
8
GLU
212
B
GLU
213
n
9
GLU
213
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
36
A
N
LYS
36
A
O
THR
56
A
O
THR
56
A
N
ILE
59
A
N
ILE
59
A
O
ILE
70
A
O
ILE
70
A
N
CYS
73
A
N
CYS
73
A
O
PHE
88
A
O
PHE
88
A
N
TYR
42
A
N
TYR
42
A
O
ARG
50
A
O
ARG
50
1
A
MET
1
A
MET
1
1
Y
2
A
MET
1
A
MET
1
1
Y
3
A
MET
1
A
MET
1
1
Y
4
A
MET
1
A
MET
1
1
Y
5
A
MET
1
A
MET
1
1
Y
6
A
MET
1
A
MET
1
1
Y
7
A
MET
1
A
MET
1
1
Y
8
A
MET
1
A
MET
1
1
Y
9
A
MET
1
A
MET
1
1
Y
10
A
MET
1
A
MET
1
1
Y
11
A
MET
1
A
MET
1
1
Y
12
A
MET
1
A
MET
1
1
Y
13
A
MET
1
A
MET
1
1
Y
14
A
MET
1
A
MET
1
1
Y
15
A
MET
1
A
MET
1
1
Y
16
A
MET
1
A
MET
1
1
Y
17
A
MET
1
A
MET
1
1
Y
18
A
MET
1
A
MET
1
1
Y
19
A
MET
1
A
MET
1
1
Y
20
A
MET
1
A
MET
1
1
Y
1
B
B
O
H
PRO
ALA
207
209
1.59
5
B
B
O
H
PRO
ALA
207
209
1.59
10
B
B
O
H
PRO
ALA
207
209
1.58
14
B
B
O
H
PRO
ALA
207
209
1.59
15
B
B
O
H
PRO
ALA
207
209
1.59
19
B
B
O
H
PRO
ALA
207
209
1.59
1
A
VAL
12
-105.07
-81.98
1
A
LYS
14
-153.38
-1.28
1
A
PHE
44
-146.52
-67.07
1
A
ASN
45
-56.18
85.37
1
A
TYR
63
-101.86
-161.32
1
A
THR
79
171.94
41.47
1
A
TYR
82
-158.12
-40.18
1
A
ALA
105
173.39
-26.76
1
A
LEU
111
68.93
149.12
1
A
TYR
113
63.97
-80.03
1
A
TRP
117
-75.18
-86.46
1
A
GLN
121
70.48
-53.50
1
B
PRO
207
-93.14
-79.47
1
B
THR
208
65.04
-55.87
1
B
ALA
209
90.52
158.59
1
B
GLU
212
-151.83
-138.56
2
A
VAL
12
-102.57
-85.08
2
A
SER
13
66.59
-54.70
2
A
TYR
17
-140.27
49.98
2
A
LYS
33
80.88
-8.31
2
A
PHE
44
-148.96
-67.44
2
A
ASN
45
-58.76
83.96
2
A
TYR
63
-110.72
-168.76
2
A
THR
79
-178.22
47.81
2
A
TYR
82
-158.97
-37.23
2
A
PRO
84
-53.49
106.43
2
A
PRO
85
-85.09
-100.17
2
A
ILE
86
12.33
109.26
2
A
THR
92
-77.73
-73.08
2
A
SER
93
177.04
-39.38
2
A
ALA
105
172.03
41.60
2
A
TYR
113
65.62
-69.91
2
A
GLU
116
-97.78
-67.64
2
A
TRP
117
-74.37
-89.77
2
A
GLN
121
69.63
-60.25
2
A
ARG
144
63.18
154.56
2
B
PRO
207
-91.64
-78.15
2
B
THR
208
64.75
-56.90
2
B
ALA
209
86.71
158.63
2
B
GLU
212
-153.74
-137.11
3
A
VAL
12
-101.64
-85.81
3
A
SER
13
65.94
-59.60
3
A
LYS
33
78.04
-2.44
3
A
PHE
44
-148.99
-67.23
3
A
ASN
45
-57.39
86.01
3
A
TYR
63
-107.87
-161.44
3
A
THR
79
-158.33
-36.59
3
A
TYR
82
-158.80
71.64
3
A
ASN
83
63.91
128.42
3
A
ALA
105
172.38
-22.45
3
A
PRO
112
-62.73
70.62
3
A
TYR
113
-104.05
-75.80
3
A
GLU
116
-94.71
-66.13
3
A
TRP
117
-75.12
-100.99
3
A
GLN
121
77.38
-49.87
3
B
PRO
207
-86.72
-78.31
3
B
THR
208
64.70
-58.04
3
B
ALA
209
89.15
157.50
3
B
GLU
212
-153.82
-136.31
4
A
VAL
12
-99.75
-85.78
4
A
SER
13
63.95
-59.88
4
A
PHE
44
-146.76
-67.65
4
A
ASN
45
-56.91
82.45
4
A
GLU
51
-69.40
93.46
4
A
TYR
63
-100.49
-157.86
4
A
THR
79
172.84
79.21
4
A
ASN
83
-152.77
-50.37
4
A
LYS
90
-107.22
77.25
4
A
HIS
102
-95.39
-60.05
4
A
ALA
105
169.64
-28.12
4
A
GLU
116
-95.07
-74.48
4
A
TRP
117
-75.33
-116.57
4
A
GLN
121
79.85
-55.03
4
A
VAL
141
-155.45
87.87
4
B
PRO
207
-91.55
-76.47
4
B
THR
208
65.23
-56.87
4
B
ALA
209
89.56
157.67
4
B
GLU
212
-151.30
-138.77
5
A
VAL
12
-103.72
-84.06
5
A
SER
13
47.95
28.32
5
A
LYS
14
-153.99
-9.91
5
A
PHE
44
-146.08
-67.13
5
A
ASN
45
-57.56
84.29
5
A
TYR
63
-102.44
-161.91
5
A
THR
79
168.14
43.59
5
A
TYR
82
-157.87
-54.72
5
A
LYS
101
98.68
-27.69
5
A
ALA
105
173.13
-29.83
5
A
TYR
110
-97.56
43.33
5
A
GLU
116
-95.25
-75.05
5
A
TRP
117
-75.39
-85.95
5
A
GLN
121
73.72
-51.91
5
A
VAL
141
-155.45
87.99
5
B
PRO
207
-88.96
-84.08
5
B
THR
208
65.15
-57.99
5
B
ALA
209
92.13
159.58
5
B
GLU
212
-155.09
-138.41
6
A
VAL
12
-103.08
-81.30
6
A
LYS
14
-155.32
-18.56
6
A
LYS
33
54.82
14.94
6
A
PHE
44
-147.74
-66.77
6
A
ASN
45
-55.99
85.28
6
A
THR
79
177.08
39.25
6
A
TYR
82
-159.17
80.26
6
A
ASN
83
64.99
141.43
6
A
PRO
84
-58.32
108.38
6
A
ALA
105
173.38
35.72
6
A
LEU
111
-55.49
108.70
6
A
TRP
117
-75.20
-80.26
6
A
GLN
121
73.00
-54.30
6
A
ARG
144
69.59
145.28
6
B
PRO
207
-86.72
-76.92
6
B
THR
208
64.94
-59.31
6
B
ALA
209
89.54
156.25
6
B
GLU
212
-157.76
-142.77
7
A
VAL
12
-110.01
-87.19
7
A
SER
13
75.00
-22.64
7
A
LYS
14
-157.72
69.42
7
A
LYS
16
32.89
36.72
7
A
TYR
17
60.91
87.07
7
A
PHE
44
-146.67
-67.01
7
A
ASN
45
-56.97
83.71
7
A
TYR
63
-103.35
-151.61
7
A
THR
79
163.71
75.08
7
A
TYR
80
177.64
123.20
7
A
TYR
82
-158.02
-37.15
7
A
PRO
84
-56.27
106.67
7
A
THR
92
-77.04
-75.88
7
A
SER
93
176.26
-39.64
7
A
ALA
105
173.38
-32.68
7
A
TYR
113
63.23
-80.07
7
A
GLU
116
-95.86
-69.42
7
A
TRP
117
-75.14
-90.04
7
A
GLN
121
69.09
-57.91
7
A
VAL
141
-155.85
85.56
7
B
PRO
207
-91.97
-94.39
7
B
THR
208
64.97
-59.42
7
B
ALA
209
87.40
160.07
7
B
GLU
212
-152.86
-139.97
8
A
VAL
12
-105.66
-84.45
8
A
LYS
14
-156.10
7.67
8
A
SER
41
-164.72
118.76
8
A
PHE
44
-147.47
-67.25
8
A
ASN
45
-56.25
84.70
8
A
ARG
64
64.74
67.62
8
A
THR
79
176.54
38.97
8
A
TYR
82
-158.29
-39.43
8
A
PRO
84
-58.27
108.42
8
A
ALA
105
173.84
-26.80
8
A
GLU
116
-95.05
-66.23
8
A
TRP
117
-67.06
-123.43
8
A
GLN
121
77.47
-53.07
8
A
VAL
141
-155.66
87.41
8
B
PRO
207
-92.04
-87.08
8
B
THR
208
63.14
-30.62
8
B
ALA
209
60.91
162.70
8
B
GLU
212
-153.31
-133.63
9
A
VAL
12
-98.63
-82.52
9
A
LYS
14
-154.20
3.13
9
A
LYS
33
54.70
17.95
9
A
PHE
44
-147.47
-67.19
9
A
ASN
45
-59.77
80.98
9
A
ARG
64
70.67
71.66
9
A
THR
79
-179.92
38.33
9
A
TYR
82
-159.18
-37.90
9
A
PRO
84
-55.86
105.57
9
A
ALA
105
172.87
-30.27
9
A
LEU
111
-47.06
105.05
9
A
GLU
116
-95.38
-68.14
9
A
TRP
117
-75.29
-106.24
9
A
GLN
121
70.28
-60.49
9
A
VAL
141
-154.96
87.31
9
B
PRO
207
-88.98
-82.33
9
B
THR
208
65.33
-58.41
9
B
ALA
209
92.86
162.33
9
B
GLU
212
-155.24
-139.11
10
A
VAL
12
-101.46
-81.62
10
A
LYS
14
-151.60
-6.10
10
A
PHE
44
-146.70
-66.76
10
A
ASN
45
-57.16
84.33
10
A
TYR
63
-102.00
-159.98
10
A
LEU
77
-70.25
-157.95
10
A
ASP
78
-168.98
33.70
10
A
THR
79
-159.33
18.78
10
A
TYR
80
-43.41
162.03
10
A
TYR
82
-159.72
-38.69
10
A
ASN
83
67.02
136.88
10
A
ILE
86
-162.65
115.49
10
A
LYS
90
-105.31
76.47
10
A
ALA
105
172.90
35.47
10
A
LEU
111
-51.86
107.17
10
A
GLU
116
-102.56
-67.20
10
A
TRP
117
-75.06
-104.32
10
A
GLN
121
81.21
-50.48
10
B
PRO
207
-94.11
-82.36
10
B
THR
208
65.29
-54.97
10
B
ALA
209
89.05
159.91
10
B
GLU
212
-152.28
-139.84
11
A
VAL
12
-103.38
-85.25
11
A
LYS
14
-155.28
4.36
11
A
SER
41
-163.84
98.62
11
A
PHE
44
-146.01
-67.15
11
A
ASN
45
-57.33
84.27
11
A
ARG
64
84.92
-35.63
11
A
CYS
73
-156.43
87.53
11
A
THR
79
167.78
83.29
11
A
TYR
80
-173.07
142.10
11
A
PRO
81
-74.44
-70.44
11
A
ASN
83
-152.46
-65.87
11
A
PRO
85
-87.73
-155.50
11
A
ALA
105
172.14
-31.10
11
A
GLU
116
-94.60
-66.66
11
A
TRP
117
-66.77
-141.54
11
A
LYS
118
72.26
50.98
11
A
GLN
121
77.29
-60.62
11
A
ASP
137
-141.76
-43.51
11
A
ARG
144
-163.28
105.20
11
B
PRO
207
-93.45
-84.54
11
B
THR
208
66.62
-55.32
11
B
ALA
209
88.03
163.54
11
B
GLU
212
-146.49
-140.02
12
A
VAL
12
-100.35
-84.32
12
A
SER
13
71.13
-50.34
12
A
PHE
44
-146.47
-66.93
12
A
ASN
45
-57.77
84.96
12
A
LEU
77
-70.18
-158.11
12
A
ASP
78
-171.43
40.72
12
A
THR
79
-153.88
-65.90
12
A
TYR
80
58.53
143.42
12
A
TYR
82
-158.71
-32.34
12
A
ASN
83
69.88
141.17
12
A
LYS
101
101.24
-28.61
12
A
ASP
104
-93.73
-68.25
12
A
ALA
105
169.90
30.99
12
A
ASN
106
-144.72
10.14
12
A
TYR
110
-95.78
-148.62
12
A
LEU
111
65.83
148.75
12
A
TYR
113
-44.66
-70.46
12
A
GLU
116
-94.63
-75.42
12
A
TRP
117
-75.20
-87.22
12
A
GLN
121
76.35
-51.83
12
B
PRO
207
-83.41
-78.90
12
B
THR
208
64.52
-60.63
12
B
ALA
209
89.85
163.14
12
B
GLU
212
-154.85
-143.85
13
A
VAL
12
-104.22
-83.52
13
A
LYS
14
-154.49
-15.26
13
A
PHE
44
-147.63
-67.46
13
A
ASN
45
-57.09
84.50
13
A
TYR
63
-101.75
-136.11
13
A
THR
79
171.47
61.99
13
A
PRO
81
-73.20
-72.01
13
A
PRO
84
-52.04
106.80
13
A
THR
96
-116.45
-156.39
13
A
ALA
105
171.67
-32.00
13
A
LEU
111
-175.67
-175.24
13
A
TYR
113
-96.59
-71.27
13
A
GLU
116
-95.08
-69.70
13
A
TRP
117
-75.32
-131.96
13
A
LYS
118
71.15
46.70
13
A
GLN
121
82.56
-42.77
13
B
GLU
206
-59.93
172.77
13
B
PRO
207
-92.03
-81.10
13
B
THR
208
64.63
-59.09
13
B
ALA
209
90.55
161.37
14
A
VAL
12
-102.74
-82.50
14
A
LYS
14
-151.26
-13.12
14
A
PHE
44
-146.22
-66.80
14
A
ASN
45
-56.94
84.57
14
A
GLU
51
-68.49
83.17
14
A
TYR
63
-105.32
-151.85
14
A
THR
79
169.05
68.14
14
A
PRO
81
-73.48
-70.03
14
A
ASN
83
-151.86
-53.66
14
A
ILE
86
178.95
146.20
14
A
ALA
105
171.63
-27.10
14
A
TYR
113
64.24
-74.53
14
A
GLU
116
-95.29
-72.16
14
A
TRP
117
-75.13
-110.35
14
A
GLN
121
79.67
-54.09
14
A
VAL
141
-155.73
85.27
14
B
PRO
207
-89.26
-81.53
14
B
THR
208
65.10
-57.50
14
B
ALA
209
91.47
159.36
14
B
GLU
212
-152.52
-139.34
15
A
VAL
12
-101.15
-80.51
15
A
SER
13
46.04
27.59
15
A
LYS
14
-154.12
10.89
15
A
TYR
17
-142.74
56.51
15
A
PHE
44
-144.55
-67.47
15
A
ASN
45
-56.61
85.20
15
A
TYR
63
-101.55
-161.45
15
A
THR
79
174.88
40.51
15
A
TYR
82
-157.40
-46.99
15
A
ASN
83
-151.90
-56.29
15
A
ALA
105
171.30
-23.55
15
A
GLU
116
-94.36
-78.04
15
A
TRP
117
-75.03
-86.87
15
A
GLN
121
77.07
-42.51
15
A
VAL
141
-155.95
87.10
15
B
PRO
207
-91.18
-83.67
15
B
THR
208
65.74
-54.39
15
B
ALA
209
89.49
156.10
15
B
GLU
212
-159.60
-135.12
16
A
VAL
12
-103.80
-87.56
16
A
LYS
14
-156.91
13.89
16
A
LYS
33
79.10
-3.35
16
A
SER
41
-163.23
116.34
16
A
PHE
44
-147.27
-67.05
16
A
ASN
45
-56.67
83.79
16
A
ASP
78
-68.87
49.25
16
A
TYR
82
-158.97
-45.39
16
A
LYS
90
-105.55
77.60
16
A
ALA
105
170.59
-27.10
16
A
GLU
116
-94.85
-80.86
16
A
TRP
117
-75.32
-107.98
16
A
GLN
121
69.76
-53.03
16
A
VAL
141
-155.67
84.78
16
B
GLU
206
-59.83
173.87
16
B
PRO
207
-91.26
-77.55
16
B
THR
208
64.87
-57.51
16
B
ALA
209
88.83
158.58
16
B
GLU
212
-152.84
-141.64
17
A
VAL
12
-102.34
-82.82
17
A
SER
13
72.81
-43.48
17
A
LYS
33
54.85
15.08
17
A
PHE
44
-147.05
-67.65
17
A
ASN
45
-56.57
84.52
17
A
ARG
64
70.01
68.76
17
A
LEU
77
-70.00
-160.12
17
A
ASP
78
-168.71
31.97
17
A
THR
79
-145.13
11.37
17
A
TYR
80
-33.35
140.10
17
A
TYR
82
-158.84
-40.11
17
A
ASN
83
64.62
127.56
17
A
ALA
105
172.58
34.52
17
A
LEU
111
-178.86
130.83
17
A
PRO
112
-68.62
62.57
17
A
TRP
117
-75.12
-103.84
17
A
GLN
121
74.75
-56.80
17
A
VAL
141
-156.00
88.94
17
B
PRO
207
-89.30
-80.97
17
B
THR
208
65.20
-58.88
17
B
ALA
209
92.69
160.82
17
B
GLU
212
-156.91
-143.11
18
A
VAL
12
-99.48
-80.07
18
A
LYS
14
-156.31
77.27
18
A
PHE
44
-146.92
-67.22
18
A
ASN
45
-56.72
84.10
18
A
TYR
63
-100.65
-133.35
18
A
THR
79
179.08
49.42
18
A
TYR
80
-174.02
108.48
18
A
PRO
81
-66.03
-166.50
18
A
ALA
105
172.35
-25.50
18
A
TYR
110
-99.01
45.31
18
A
PRO
112
-69.24
63.10
18
A
GLU
116
-95.31
-78.08
18
A
TRP
117
-75.36
-99.75
18
A
GLN
121
77.05
-52.47
18
B
GLU
206
-59.54
172.18
18
B
PRO
207
-88.30
-80.13
18
B
THR
208
65.25
-59.67
18
B
ALA
209
93.72
162.96
19
A
VAL
12
-103.64
-82.32
19
A
LYS
14
-152.84
-0.76
19
A
SER
41
-165.36
104.03
19
A
PHE
44
-147.63
-67.49
19
A
ASN
45
-56.82
85.14
19
A
TYR
63
-101.56
-162.00
19
A
CYS
73
-155.24
88.22
19
A
THR
79
178.48
52.03
19
A
TYR
82
-158.31
-42.12
19
A
ALA
105
171.24
-29.80
19
A
PRO
112
-68.77
63.95
19
A
GLU
116
-94.76
-66.39
19
A
TRP
117
-74.99
-88.23
19
A
GLN
121
80.55
-48.37
19
A
VAL
141
-155.95
84.31
19
B
GLU
206
-59.64
172.25
19
B
PRO
207
-89.16
-82.08
19
B
THR
208
65.36
-57.64
19
B
ALA
209
91.88
158.26
19
B
GLU
212
-152.12
-67.51
20
A
VAL
12
-105.47
-82.17
20
A
LYS
14
-154.21
-4.44
20
A
LYS
33
79.01
-3.20
20
A
PHE
44
-146.12
-67.41
20
A
ASN
45
-57.38
84.60
20
A
THR
79
172.03
41.78
20
A
TYR
82
-159.17
-38.51
20
A
ALA
105
173.45
-28.31
20
A
LEU
111
67.38
149.11
20
A
TYR
113
65.33
-77.84
20
A
GLU
116
-94.82
-66.27
20
A
TRP
117
-71.29
-90.55
20
A
GLN
121
76.02
-54.38
20
A
VAL
141
-156.74
88.38
20
B
PRO
207
-92.31
-84.02
20
B
THR
208
63.29
-34.59
20
B
ALA
209
60.78
163.21
20
B
GLU
212
-150.61
-138.63
STRUCTURE OF THE TSG101 UEV DOMAIN IN COMPLEX WITH A HIV-1 PTAP "LATE DOMAIN" PEPTIDE, CNS ENSEMBLE
1
N
N
2
N
N
A
VAL
3
A
VAL
3
HELX_P
A
SER
13
A
SER
13
1
1
11
A
TYR
17
A
TYR
17
HELX_P
A
LYS
33
A
LYS
33
1
2
17
A
ASP
123
A
ASP
123
HELX_P
A
GLU
138
A
GLU
138
1
3
16
PEPTIDE BINDING PROTEIN
Tsg101 UEV domain, virus budding, vacuolar protein sorting, late domain, PEPTIDE BINDING PROTEIN
A
TYR
80
A
TYR
80
1
A
PRO
81
A
PRO
81
0.65
A
HIS
119
A
HIS
119
1
A
PRO
120
A
PRO
120
0.60
A
TYR
80
A
TYR
80
2
A
PRO
81
A
PRO
81
-0.11
A
HIS
119
A
HIS
119
2
A
PRO
120
A
PRO
120
0.66
A
TYR
80
A
TYR
80
3
A
PRO
81
A
PRO
81
0.36
A
HIS
119
A
HIS
119
3
A
PRO
120
A
PRO
120
0.60
A
TYR
80
A
TYR
80
4
A
PRO
81
A
PRO
81
-0.55
A
HIS
119
A
HIS
119
4
A
PRO
120
A
PRO
120
0.60
A
TYR
80
A
TYR
80
5
A
PRO
81
A
PRO
81
-0.05
A
HIS
119
A
HIS
119
5
A
PRO
120
A
PRO
120
0.56
A
TYR
80
A
TYR
80
6
A
PRO
81
A
PRO
81
0.27
A
HIS
119
A
HIS
119
6
A
PRO
120
A
PRO
120
0.50
A
TYR
80
A
TYR
80
7
A
PRO
81
A
PRO
81
0.14
A
HIS
119
A
HIS
119
7
A
PRO
120
A
PRO
120
0.55
A
TYR
80
A
TYR
80
8
A
PRO
81
A
PRO
81
0.69
A
HIS
119
A
HIS
119
8
A
PRO
120
A
PRO
120
0.67
A
TYR
80
A
TYR
80
9
A
PRO
81
A
PRO
81
-0.02
A
HIS
119
A
HIS
119
9
A
PRO
120
A
PRO
120
0.68
A
TYR
80
A
TYR
80
10
A
PRO
81
A
PRO
81
0.25
A
HIS
119
A
HIS
119
10
A
PRO
120
A
PRO
120
0.74
A
TYR
80
A
TYR
80
11
A
PRO
81
A
PRO
81
0.03
A
HIS
119
A
HIS
119
11
A
PRO
120
A
PRO
120
0.70
A
TYR
80
A
TYR
80
12
A
PRO
81
A
PRO
81
-0.10
A
HIS
119
A
HIS
119
12
A
PRO
120
A
PRO
120
0.56
A
TYR
80
A
TYR
80
13
A
PRO
81
A
PRO
81
-0.15
A
HIS
119
A
HIS
119
13
A
PRO
120
A
PRO
120
0.53
A
TYR
80
A
TYR
80
14
A
PRO
81
A
PRO
81
-0.11
A
HIS
119
A
HIS
119
14
A
PRO
120
A
PRO
120
0.72
A
TYR
80
A
TYR
80
15
A
PRO
81
A
PRO
81
-0.76
A
HIS
119
A
HIS
119
15
A
PRO
120
A
PRO
120
0.48
A
TYR
80
A
TYR
80
16
A
PRO
81
A
PRO
81
0.45
A
HIS
119
A
HIS
119
16
A
PRO
120
A
PRO
120
0.47
A
TYR
80
A
TYR
80
17
A
PRO
81
A
PRO
81
0.28
A
HIS
119
A
HIS
119
17
A
PRO
120
A
PRO
120
0.65
A
TYR
80
A
TYR
80
18
A
PRO
81
A
PRO
81
0.04
A
HIS
119
A
HIS
119
18
A
PRO
120
A
PRO
120
0.67
A
TYR
80
A
TYR
80
19
A
PRO
81
A
PRO
81
-0.04
A
HIS
119
A
HIS
119
19
A
PRO
120
A
PRO
120
0.65
A
TYR
80
A
TYR
80
20
A
PRO
81
A
PRO
81
0.34
A
HIS
119
A
HIS
119
20
A
PRO
120
A
PRO
120
0.70
TS101_HUMAN
UNP
1
1
Q99816
MAVSESQLKKMVSKYKYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIPVPYRGNTYNIPICLWLLDTY
PYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVFSRP
Q9IF21_9HIV1
UNP
2
453
Q9IF21
PEPTAPPEE
1
145
1M4Q
1
145
Q99816
A
1
1
145
453
461
1M4Q
205
213
Q9IF21
B
2
1
9
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
35
A
LEU
35
A
VAL
38
A
VAL
38
A
ASN
54
A
ASN
54
A
PRO
62
A
PRO
62
A
THR
67
A
THR
67
A
TRP
75
A
TRP
75
A
CYS
87
A
CYS
87
A
VAL
89
A
VAL
89
A
SER
41
A
SER
41
A
VAL
43
A
VAL
43
A
SER
49
A
SER
49
A
GLU
51
A
GLU
51