0.014184
0.000000
0.000000
0.000000
0.014184
0.000000
0.000000
0.000000
0.004723
0.00000
0.00000
0.00000
Choe, J.
Suresh, S.
Wisedchaisri, G.
Kennedy, K.J.
Gelb, M.H.
Hol, W.G.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
70.503
70.503
211.738
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H3 Br N4 O
215.008
2-BROMO-6-HYDROXY-PURINE
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C16 H32 O2
256.424
PALMITIC ACID
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
Y
75
N
C
Y
76
N
N
Y
77
N
C
N
78
N
BR
Y
79
N
C
Y
80
N
C
Y
81
N
N
Y
82
N
N
Y
83
N
C
Y
84
N
N
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
R
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
S
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
N
N
103
S
C
N
104
N
C
N
105
N
O
N
106
N
C
N
107
N
C
N
108
N
C
N
109
N
O
N
110
N
N
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
N
N
123
S
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
C
N
288
N
O
N
289
N
O
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
C
N
304
N
C
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
R
C
N
373
N
O
N
374
N
C
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
N
N
386
S
C
N
387
N
C
N
388
N
O
N
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
N
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
N
423
N
O
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
N
N
437
S
C
N
438
N
C
N
439
N
O
N
440
N
C
N
441
N
C
N
442
N
C
N
443
N
O
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
Y
72
N
doub
Y
73
N
sing
Y
74
N
sing
N
75
N
sing
Y
76
N
doub
Y
77
N
doub
Y
78
N
sing
Y
79
N
sing
Y
80
N
sing
Y
81
N
sing
N
82
N
sing
Y
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
Y
155
N
sing
Y
156
N
doub
Y
157
N
doub
N
158
N
sing
Y
159
N
sing
N
160
N
sing
Y
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
Y
263
N
doub
Y
264
N
sing
Y
265
N
sing
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
doub
N
270
N
sing
Y
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
sing
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
UK
Chem.Biol.
CBOLE2
2050
1074-5521
9
1189
1197
10.1016/S1074-5521(02)00243-0
12445769
Anomalous differences of light elements in determining precise binding modes of ligands to
glycerol-3-phosphate dehydrogenase
2002
10.2210/pdb1m67/pdb
pdb_00001m67
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
125
1
CCD
2001-09-20
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.91942
1.0
19-ID
APS
0.91942
SYNCHROTRON
APS BEAMLINE 19-ID
39317.828
Glycerol-3-phosphate dehydrogenase
1.1.1.8
1
man
polymer
215.008
2-BROMO-6-HYDROXY-PURINE
1
syn
non-polymer
256.424
PALMITIC ACID
1
syn
non-polymer
18.015
water
82
nat
water
GPDH, L-GLYCEROL-3-PHOSPHATE DEHYDROGENASE
no
no
MSTKQHSAKDELLYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVE
KAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV
ATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLE
IRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQLKVKMP
LCHQIYEIVYKKKNPRDALADLLSCGLQDEGLPPLFKRSASTPSKL
MSTKQHSAKDELLYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVE
KAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV
ATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLE
IRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQLKVKMP
LCHQIYEIVYKKKNPRDALADLLSCGLQDEGLPPLFKRSASTPSKL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Leishmania
Escherichia
Escherichia coli
sample
5665
Leishmania mexicana
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET3a
1
3.34
63.23
VAPOR DIFFUSION, SITTING DROP
7.2
NaCitrate, TEA, DTT, EDTA, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-12-11
1
1
2008-04-28
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1evy is APO LmGPDH structure
1evz is LmGPDH : NADH binary complex structure
1jdj is the Crystal Structure Of Leishmania Mexicana Glycerol-3- Phosphate Dehydrogenase In Complex With 2-Fluoro-6- Chloropurine
1m66 is the Crystal Structure of Leishmania mexicana GPDH Complexed with Inhibitor 2-bromo-6-chloro-purine
RCSB
Y
RCSB
2002-07-12
REL
REL
BOA
2-BROMO-6-HYDROXY-PURINE
PLM
PALMITIC ACID
HOH
water
BOA
402
2
BOA
BOA
402
A
PLM
401
3
PLM
PLM
401
A
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
504
4
HOH
HOH
504
A
HOH
505
4
HOH
HOH
505
A
HOH
506
4
HOH
HOH
506
A
HOH
507
4
HOH
HOH
507
A
HOH
508
4
HOH
HOH
508
A
HOH
509
4
HOH
HOH
509
A
HOH
510
4
HOH
HOH
510
A
HOH
511
4
HOH
HOH
511
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
515
4
HOH
HOH
515
A
HOH
517
4
HOH
HOH
517
A
HOH
518
4
HOH
HOH
518
A
HOH
519
4
HOH
HOH
519
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
524
4
HOH
HOH
524
A
HOH
525
4
HOH
HOH
525
A
HOH
526
4
HOH
HOH
526
A
HOH
527
4
HOH
HOH
527
A
HOH
528
4
HOH
HOH
528
A
HOH
529
4
HOH
HOH
529
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
535
4
HOH
HOH
535
A
HOH
536
4
HOH
HOH
536
A
HOH
537
4
HOH
HOH
537
A
HOH
538
4
HOH
HOH
538
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
542
4
HOH
HOH
542
A
HOH
543
4
HOH
HOH
543
A
HOH
544
4
HOH
HOH
544
A
HOH
545
4
HOH
HOH
545
A
HOH
547
4
HOH
HOH
547
A
HOH
553
4
HOH
HOH
553
A
HOH
554
4
HOH
HOH
554
A
HOH
555
4
HOH
HOH
555
A
HOH
559
4
HOH
HOH
559
A
HOH
562
4
HOH
HOH
562
A
HOH
563
4
HOH
HOH
563
A
HOH
564
4
HOH
HOH
564
A
HOH
565
4
HOH
HOH
565
A
HOH
567
4
HOH
HOH
567
A
HOH
568
4
HOH
HOH
568
A
HOH
575
4
HOH
HOH
575
A
HOH
577
4
HOH
HOH
577
A
HOH
578
4
HOH
HOH
578
A
HOH
585
4
HOH
HOH
585
A
HOH
586
4
HOH
HOH
586
A
HOH
590
4
HOH
HOH
590
A
HOH
591
4
HOH
HOH
591
A
HOH
593
4
HOH
HOH
593
A
HOH
596
4
HOH
HOH
596
A
HOH
600
4
HOH
HOH
600
A
HOH
601
4
HOH
HOH
601
A
HOH
603
4
HOH
HOH
603
A
HOH
605
4
HOH
HOH
605
A
HOH
612
4
HOH
HOH
612
A
HOH
625
4
HOH
HOH
625
A
HOH
630
4
HOH
HOH
630
A
HOH
632
4
HOH
HOH
632
A
HOH
648
4
HOH
HOH
648
A
HOH
666
4
HOH
HOH
666
A
HOH
682
4
HOH
HOH
682
A
HOH
687
4
HOH
HOH
687
A
HOH
692
4
HOH
HOH
692
A
HOH
706
4
HOH
HOH
706
A
HOH
714
4
HOH
HOH
714
A
HOH
738
4
HOH
HOH
738
A
HOH
750
4
HOH
HOH
750
A
HOH
754
4
HOH
HOH
754
A
HOH
764
4
HOH
HOH
764
A
HOH
780
4
HOH
HOH
780
A
HOH
781
4
HOH
HOH
781
A
HOH
826
4
HOH
HOH
826
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
LYS
9
n
9
LYS
9
A
ASP
10
n
10
ASP
10
A
GLU
11
n
11
GLU
11
A
LEU
12
n
12
LEU
12
A
LEU
13
n
13
LEU
13
A
TYR
14
n
14
TYR
14
A
LEU
15
n
15
LEU
15
A
ASN
16
n
16
ASN
16
A
LYS
17
n
17
LYS
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
VAL
20
n
20
VAL
20
A
PHE
21
n
21
PHE
21
A
GLY
22
n
22
GLY
22
A
SER
23
n
23
SER
23
A
GLY
24
n
24
GLY
24
A
ALA
25
n
25
ALA
25
A
PHE
26
n
26
PHE
26
A
GLY
27
n
27
GLY
27
A
THR
28
n
28
THR
28
A
ALA
29
n
29
ALA
29
A
LEU
30
n
30
LEU
30
A
ALA
31
n
31
ALA
31
A
MET
32
n
32
MET
32
A
VAL
33
n
33
VAL
33
A
LEU
34
n
34
LEU
34
A
SER
35
n
35
SER
35
A
LYS
36
n
36
LYS
36
A
LYS
37
n
37
LYS
37
A
CYS
38
n
38
CYS
38
A
ARG
39
n
39
ARG
39
A
GLU
40
n
40
GLU
40
A
VAL
41
n
41
VAL
41
A
CYS
42
n
42
CYS
42
A
VAL
43
n
43
VAL
43
A
TRP
44
n
44
TRP
44
A
HIS
45
n
45
HIS
45
A
MET
46
n
46
MET
46
A
ASN
47
n
47
ASN
47
A
GLU
48
n
48
GLU
48
A
GLU
49
n
49
GLU
49
A
GLU
50
n
50
GLU
50
A
VAL
51
n
51
VAL
51
A
ARG
52
n
52
ARG
52
A
LEU
53
n
53
LEU
53
A
VAL
54
n
54
VAL
54
A
ASN
55
n
55
ASN
55
A
GLU
56
n
56
GLU
56
A
LYS
57
n
57
LYS
57
A
ARG
58
n
58
ARG
58
A
GLU
59
n
59
GLU
59
A
ASN
60
n
60
ASN
60
A
VAL
61
n
61
VAL
61
A
LEU
62
n
62
LEU
62
A
PHE
63
n
63
PHE
63
A
LEU
64
n
64
LEU
64
A
LYS
65
n
65
LYS
65
A
GLY
66
n
66
GLY
66
A
VAL
67
n
67
VAL
67
A
GLN
68
n
68
GLN
68
A
LEU
69
n
69
LEU
69
A
ALA
70
n
70
ALA
70
A
SER
71
n
71
SER
71
A
ASN
72
n
72
ASN
72
A
ILE
73
n
73
ILE
73
A
THR
74
n
74
THR
74
A
PHE
75
n
75
PHE
75
A
THR
76
n
76
THR
76
A
SER
77
n
77
SER
77
A
ASP
78
n
78
ASP
78
A
VAL
79
n
79
VAL
79
A
GLU
80
n
80
GLU
80
A
LYS
81
n
81
LYS
81
A
ALA
82
n
82
ALA
82
A
TYR
83
n
83
TYR
83
A
ASN
84
n
84
ASN
84
A
GLY
85
n
85
GLY
85
A
ALA
86
n
86
ALA
86
A
GLU
87
n
87
GLU
87
A
ILE
88
n
88
ILE
88
A
ILE
89
n
89
ILE
89
A
LEU
90
n
90
LEU
90
A
PHE
91
n
91
PHE
91
A
VAL
92
n
92
VAL
92
A
ILE
93
n
93
ILE
93
A
PRO
94
n
94
PRO
94
A
THR
95
n
95
THR
95
A
GLN
96
n
96
GLN
96
A
PHE
97
n
97
PHE
97
A
LEU
98
n
98
LEU
98
A
ARG
99
n
99
ARG
99
A
GLY
100
n
100
GLY
100
A
PHE
101
n
101
PHE
101
A
PHE
102
n
102
PHE
102
A
GLU
103
n
103
GLU
103
A
LYS
104
n
104
LYS
104
A
SER
105
n
105
SER
105
A
GLY
106
n
106
GLY
106
A
GLY
107
n
107
GLY
107
A
ASN
108
n
108
ASN
108
A
LEU
109
n
109
LEU
109
A
ILE
110
n
110
ILE
110
A
ALA
111
n
111
ALA
111
A
TYR
112
n
112
TYR
112
A
ALA
113
n
113
ALA
113
A
LYS
114
n
114
LYS
114
A
GLU
115
n
115
GLU
115
A
LYS
116
n
116
LYS
116
A
GLN
117
n
117
GLN
117
A
VAL
118
n
118
VAL
118
A
PRO
119
n
119
PRO
119
A
VAL
120
n
120
VAL
120
A
LEU
121
n
121
LEU
121
A
VAL
122
n
122
VAL
122
A
CYS
123
n
123
CYS
123
A
THR
124
n
124
THR
124
A
LYS
125
n
125
LYS
125
A
GLY
126
n
126
GLY
126
A
ILE
127
n
127
ILE
127
A
GLU
128
n
128
GLU
128
A
ARG
129
n
129
ARG
129
A
SER
130
n
130
SER
130
A
THR
131
n
131
THR
131
A
LEU
132
n
132
LEU
132
A
LYS
133
n
133
LYS
133
A
PHE
134
n
134
PHE
134
A
PRO
135
n
135
PRO
135
A
ALA
136
n
136
ALA
136
A
GLU
137
n
137
GLU
137
A
ILE
138
n
138
ILE
138
A
ILE
139
n
139
ILE
139
A
GLY
140
n
140
GLY
140
A
GLU
141
n
141
GLU
141
A
PHE
142
n
142
PHE
142
A
LEU
143
n
143
LEU
143
A
PRO
144
n
144
PRO
144
A
SER
145
n
145
SER
145
A
PRO
146
n
146
PRO
146
A
LEU
147
n
147
LEU
147
A
LEU
148
n
148
LEU
148
A
SER
149
n
149
SER
149
A
VAL
150
n
150
VAL
150
A
LEU
151
n
151
LEU
151
A
ALA
152
n
152
ALA
152
A
GLY
153
n
153
GLY
153
A
PRO
154
n
154
PRO
154
A
SER
155
n
155
SER
155
A
PHE
156
n
156
PHE
156
A
ALA
157
n
157
ALA
157
A
ILE
158
n
158
ILE
158
A
GLU
159
n
159
GLU
159
A
VAL
160
n
160
VAL
160
A
ALA
161
n
161
ALA
161
A
THR
162
n
162
THR
162
A
GLY
163
n
163
GLY
163
A
VAL
164
n
164
VAL
164
A
PHE
165
n
165
PHE
165
A
THR
166
n
166
THR
166
A
CYS
167
n
167
CYS
167
A
VAL
168
n
168
VAL
168
A
SER
169
n
169
SER
169
A
ILE
170
n
170
ILE
170
A
ALA
171
n
171
ALA
171
A
SER
172
n
172
SER
172
A
ALA
173
n
173
ALA
173
A
ASP
174
n
174
ASP
174
A
ILE
175
n
175
ILE
175
A
ASN
176
n
176
ASN
176
A
VAL
177
n
177
VAL
177
A
ALA
178
n
178
ALA
178
A
ARG
179
n
179
ARG
179
A
ARG
180
n
180
ARG
180
A
LEU
181
n
181
LEU
181
A
GLN
182
n
182
GLN
182
A
ARG
183
n
183
ARG
183
A
ILE
184
n
184
ILE
184
A
MET
185
n
185
MET
185
A
SER
186
n
186
SER
186
A
THR
187
n
187
THR
187
A
GLY
188
n
188
GLY
188
A
ASP
189
n
189
ASP
189
A
ARG
190
n
190
ARG
190
A
SER
191
n
191
SER
191
A
PHE
192
n
192
PHE
192
A
VAL
193
n
193
VAL
193
A
CYS
194
n
194
CYS
194
A
TRP
195
n
195
TRP
195
A
ALA
196
n
196
ALA
196
A
THR
197
n
197
THR
197
A
THR
198
n
198
THR
198
A
ASP
199
n
199
ASP
199
A
THR
200
n
200
THR
200
A
VAL
201
n
201
VAL
201
A
GLY
202
n
202
GLY
202
A
CYS
203
n
203
CYS
203
A
GLU
204
n
204
GLU
204
A
VAL
205
n
205
VAL
205
A
ALA
206
n
206
ALA
206
A
SER
207
n
207
SER
207
A
ALA
208
n
208
ALA
208
A
VAL
209
n
209
VAL
209
A
LYS
210
n
210
LYS
210
A
ASN
211
n
211
ASN
211
A
VAL
212
n
212
VAL
212
A
LEU
213
n
213
LEU
213
A
ALA
214
n
214
ALA
214
A
ILE
215
n
215
ILE
215
A
GLY
216
n
216
GLY
216
A
SER
217
n
217
SER
217
A
GLY
218
n
218
GLY
218
A
VAL
219
n
219
VAL
219
A
ALA
220
n
220
ALA
220
A
ASN
221
n
221
ASN
221
A
GLY
222
n
222
GLY
222
A
LEU
223
n
223
LEU
223
A
GLY
224
n
224
GLY
224
A
MET
225
n
225
MET
225
A
GLY
226
n
226
GLY
226
A
LEU
227
n
227
LEU
227
A
ASN
228
n
228
ASN
228
A
ALA
229
n
229
ALA
229
A
ARG
230
n
230
ARG
230
A
ALA
231
n
231
ALA
231
A
ALA
232
n
232
ALA
232
A
LEU
233
n
233
LEU
233
A
ILE
234
n
234
ILE
234
A
MET
235
n
235
MET
235
A
ARG
236
n
236
ARG
236
A
GLY
237
n
237
GLY
237
A
LEU
238
n
238
LEU
238
A
LEU
239
n
239
LEU
239
A
GLU
240
n
240
GLU
240
A
ILE
241
n
241
ILE
241
A
ARG
242
n
242
ARG
242
A
ASP
243
n
243
ASP
243
A
LEU
244
n
244
LEU
244
A
THR
245
n
245
THR
245
A
ALA
246
n
246
ALA
246
A
ALA
247
n
247
ALA
247
A
LEU
248
n
248
LEU
248
A
GLY
249
n
249
GLY
249
A
GLY
250
n
250
GLY
250
A
ASP
251
n
251
ASP
251
A
GLY
252
n
252
GLY
252
A
SER
253
n
253
SER
253
A
ALA
254
n
254
ALA
254
A
VAL
255
n
255
VAL
255
A
PHE
256
n
256
PHE
256
A
GLY
257
n
257
GLY
257
A
LEU
258
n
258
LEU
258
A
ALA
259
n
259
ALA
259
A
GLY
260
n
260
GLY
260
A
LEU
261
n
261
LEU
261
A
GLY
262
n
262
GLY
262
A
ASP
263
n
263
ASP
263
A
LEU
264
n
264
LEU
264
A
GLN
265
n
265
GLN
265
A
LEU
266
n
266
LEU
266
A
THR
267
n
267
THR
267
A
CYS
268
n
268
CYS
268
A
SER
269
n
269
SER
269
A
SER
270
n
270
SER
270
A
GLU
271
n
271
GLU
271
A
LEU
272
n
272
LEU
272
A
SER
273
n
273
SER
273
A
ARG
274
n
274
ARG
274
A
ASN
275
n
275
ASN
275
A
PHE
276
n
276
PHE
276
A
THR
277
n
277
THR
277
A
VAL
278
n
278
VAL
278
A
GLY
279
n
279
GLY
279
A
LYS
280
n
280
LYS
280
A
LYS
281
n
281
LYS
281
A
LEU
282
n
282
LEU
282
A
GLY
283
n
283
GLY
283
A
LYS
284
n
284
LYS
284
A
GLY
285
n
285
GLY
285
A
LEU
286
n
286
LEU
286
A
PRO
287
n
287
PRO
287
A
ILE
288
n
288
ILE
288
A
GLU
289
n
289
GLU
289
A
GLU
290
n
290
GLU
290
A
ILE
291
n
291
ILE
291
A
GLN
292
n
292
GLN
292
A
ARG
293
n
293
ARG
293
A
n
294
294
A
n
295
295
A
n
296
296
A
ALA
297
n
297
ALA
297
A
VAL
298
n
298
VAL
298
A
ALA
299
n
299
ALA
299
A
GLU
300
n
300
GLU
300
A
GLY
301
n
301
GLY
301
A
VAL
302
n
302
VAL
302
A
ALA
303
n
303
ALA
303
A
THR
304
n
304
THR
304
A
ALA
305
n
305
ALA
305
A
ASP
306
n
306
ASP
306
A
PRO
307
n
307
PRO
307
A
LEU
308
n
308
LEU
308
A
MET
309
n
309
MET
309
A
ARG
310
n
310
ARG
310
A
LEU
311
n
311
LEU
311
A
ALA
312
n
312
ALA
312
A
LYS
313
n
313
LYS
313
A
GLN
314
n
314
GLN
314
A
LEU
315
n
315
LEU
315
A
LYS
316
n
316
LYS
316
A
VAL
317
n
317
VAL
317
A
LYS
318
n
318
LYS
318
A
MET
319
n
319
MET
319
A
PRO
320
n
320
PRO
320
A
LEU
321
n
321
LEU
321
A
CYS
322
n
322
CYS
322
A
HIS
323
n
323
HIS
323
A
GLN
324
n
324
GLN
324
A
ILE
325
n
325
ILE
325
A
TYR
326
n
326
TYR
326
A
GLU
327
n
327
GLU
327
A
ILE
328
n
328
ILE
328
A
VAL
329
n
329
VAL
329
A
TYR
330
n
330
TYR
330
A
LYS
331
n
331
LYS
331
A
LYS
332
n
332
LYS
332
A
LYS
333
n
333
LYS
333
A
ASN
334
n
334
ASN
334
A
PRO
335
n
335
PRO
335
A
ARG
336
n
336
ARG
336
A
ASP
337
n
337
ASP
337
A
ALA
338
n
338
ALA
338
A
LEU
339
n
339
LEU
339
A
ALA
340
n
340
ALA
340
A
ASP
341
n
341
ASP
341
A
LEU
342
n
342
LEU
342
A
LEU
343
n
343
LEU
343
A
SER
344
n
344
SER
344
A
CYS
345
n
345
CYS
345
A
GLY
346
n
346
GLY
346
A
LEU
347
n
347
LEU
347
A
GLN
348
n
348
GLN
348
A
ASP
349
n
349
ASP
349
A
GLU
350
n
350
GLU
350
A
GLY
351
n
351
GLY
351
A
LEU
352
n
352
LEU
352
A
PRO
353
n
353
PRO
353
A
PRO
354
n
354
PRO
354
A
LEU
355
n
355
LEU
355
A
PHE
356
n
356
PHE
356
A
LYS
357
n
357
LYS
357
A
n
358
358
A
n
359
359
A
n
360
360
A
n
361
361
A
n
362
362
A
n
363
363
A
n
364
364
A
n
365
365
A
n
366
366
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
7860
-39
26130
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
74
A
O
THR
74
A
N
VAL
41
A
N
VAL
41
A
O
TRP
44
A
O
TRP
44
A
N
VAL
20
A
N
VAL
20
A
N
PHE
21
A
N
PHE
21
A
O
LEU
90
A
O
LEU
90
A
N
ILE
89
A
N
ILE
89
A
O
LEU
121
A
O
LEU
121
A
N
VAL
122
A
N
VAL
122
A
O
SER
149
A
O
SER
149
A
N
ALA
152
A
N
ALA
152
A
O
SER
169
A
O
SER
169
A
N
THR
166
A
N
THR
166
A
O
VAL
193
A
O
VAL
193
1
A
CD
LYS
9
A
CD
LYS
9
1
Y
1
A
CE
LYS
9
A
CE
LYS
9
1
Y
1
A
NZ
LYS
9
A
NZ
LYS
9
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
LYS
4
A
LYS
4
1
Y
1
A
GLN
5
A
GLN
5
1
Y
1
A
HIS
6
A
HIS
6
1
Y
1
A
SER
7
A
SER
7
1
Y
1
A
ALA
8
A
ALA
8
1
Y
1
A
THR
294
A
THR
294
1
Y
1
A
SER
295
A
SER
295
1
Y
1
A
LYS
296
A
LYS
296
1
Y
1
A
ARG
358
A
ARG
358
1
Y
1
A
SER
359
A
SER
359
1
Y
1
A
ALA
360
A
ALA
360
1
Y
1
A
SER
361
A
SER
361
1
Y
1
A
THR
362
A
THR
362
1
Y
1
A
PRO
363
A
PRO
363
1
Y
1
A
SER
364
A
SER
364
1
Y
1
A
LYS
365
A
LYS
365
1
Y
1
A
LEU
366
A
LEU
366
1
Y
1
A
A
O
O
HOH
HOH
511
519
1.18
1
A
A
O
O
HOH
HOH
523
553
1.87
1
A
A
O2
O
PLM
HOH
401
537
2.17
1
A
SER
155
-154.50
80.19
1
A
PHE
165
-34.72
116.92
1
A
ILE
291
-64.32
-76.11
1
A
GLN
292
-29.96
108.87
48.892
1.70
0.00
0.00
1.70
0.00
-3.40
0.910
0.883
0.28606
0.24399
0.2461
0.24399
2.50
50.00
983
19165
19165
5.1
98.9
9.071
0.209
RANDOM
1
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
0.378
0.281
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.50
50.00
82
2713
29
0
2602
0.009
0.022
2668
1.334
1.993
3597
3.239
3.000
344
17.185
15.000
498
0.087
0.200
424
0.004
0.020
1931
0.250
0.300
1367
0.182
0.500
177
0.208
0.300
71
0.512
0.500
12
1.060
1.000
1708
2.015
1.500
2733
2.614
2.000
960
4.042
3.000
864
0.375
0.282
2.565
65
1304
20
2.5
50
1M67
19175
19175
0
0
0.089
1
34.4
15.4
98.9
0.62
2.5
2.56
4.4
1
98.9
data collection
HKL-2000
data scaling
SCALEPACK
phasing
AMoRE
refinement
REFMAC
5.0
data reduction
HKL-2000
Crystal Structure of Leishmania mexicana GPDH Complexed with Inhibitor 2-bromo-6-hydroxy-purine
1
N
N
2
N
N
3
N
N
4
N
N
A
GLY
24
A
GLY
24
HELX_P
A
LYS
36
A
LYS
36
1
1
13
A
ASN
47
A
ASN
47
HELX_P
A
ARG
58
A
ARG
58
1
2
12
A
ASP
78
A
ASP
78
HELX_P
A
ASN
84
A
ASN
84
1
3
7
A
PRO
94
A
PRO
94
HELX_P
A
GLN
117
A
GLN
117
1
4
24
A
PHE
134
A
PHE
134
HELX_P
A
GLY
140
A
GLY
140
1
5
7
A
PRO
144
A
PRO
144
HELX_P
A
PRO
146
A
PRO
146
5
6
3
A
PHE
156
A
PHE
156
HELX_P
A
THR
162
A
THR
162
1
7
7
A
ASP
174
A
ASP
174
HELX_P
A
SER
186
A
SER
186
1
8
13
A
ASP
199
A
ASP
199
HELX_P
A
LEU
223
A
LEU
223
1
9
25
A
GLY
226
A
GLY
226
HELX_P
A
LEU
248
A
LEU
248
1
10
23
A
GLY
260
A
GLY
260
HELX_P
A
SER
269
A
SER
269
1
11
10
A
SER
273
A
SER
273
HELX_P
A
GLY
285
A
GLY
285
1
12
13
A
PRO
287
A
PRO
287
HELX_P
A
GLN
292
A
GLN
292
1
13
6
A
ALA
299
A
ALA
299
HELX_P
A
LEU
315
A
LEU
315
1
14
17
A
MET
319
A
MET
319
HELX_P
A
LYS
331
A
LYS
331
1
15
13
A
ASN
334
A
ASN
334
HELX_P
A
LEU
343
A
LEU
343
1
16
10
A
SER
344
A
SER
344
HELX_P
A
GLY
346
A
GLY
346
5
17
3
OXIDOREDUCTASE
NAD-binding motif, OXIDOREDUCTASE
P90551_LEIME
UNP
1
1
P90551
MSTKQHSAKDELLYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVE
KAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV
ATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLE
IRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQLKVKMP
LCHQIYEIVYKKKNPRDALADLLSCGLQDEGLPPLFKRSASTPSKL
1
366
1M67
1
366
P90551
A
1
1
366
8
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
A
ILE
73
A
ILE
73
A
THR
76
A
THR
76
A
CYS
38
A
CYS
38
A
TRP
44
A
TRP
44
A
LEU
15
A
LEU
15
A
PHE
21
A
PHE
21
A
ILE
89
A
ILE
89
A
PHE
91
A
PHE
91
A
VAL
120
A
VAL
120
A
VAL
122
A
VAL
122
A
LEU
148
A
LEU
148
A
ALA
152
A
ALA
152
A
THR
166
A
THR
166
A
ALA
171
A
ALA
171
A
PHE
192
A
PHE
192
A
THR
197
A
THR
197
BINDING SITE FOR RESIDUE BOA A 402
A
BOA
402
Software
1
BINDING SITE FOR RESIDUE PLM A 401
A
PLM
401
Software
10
A
PHE
97
A
PHE
97
1
1_555
A
PHE
165
A
PHE
165
10
7_555
A
VAL
219
A
VAL
219
10
1_555
A
ALA
220
A
ALA
220
10
1_555
A
MET
225
A
MET
225
10
1_555
A
ALA
229
A
ALA
229
10
1_555
A
GLN
324
A
GLN
324
10
1_555
A
ILE
325
A
ILE
325
10
1_555
A
ILE
328
A
ILE
328
10
1_555
A
LEU
342
A
LEU
342
10
1_555
A
HOH
537
D
HOH
10
1_555
92
P 41 21 2