0.014652 0.000000 0.000000 0.000000 0.009684 0.000000 0.000000 0.000000 0.017050 0.00000 0.00000 0.00000 Somoza, J.R. Palmer, J.T. Ho, J.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 68.250 103.260 58.650 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C31 H42 N4 O5 S 582.754 4-MORPHOLIN-4-YL-PIPERIDINE-1-CARBOXYLIC ACID [1-(3-BENZENESULFONYL-1-PROPYL-ALLYLCARBAMOYL)-2-PHENYLETHYL]-AMIDE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 322 559 568 10.1016/S0022-2836(02)00780-5 12225749 The crystal structure of human cathepsin F and its implications for the development of novel immunomodulators 2002 10.2210/pdb1m6d/pdb pdb_00001m6d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 2002-01-11 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.0 1.0 BL7-1 SSRL 1.0 SYNCHROTRON SSRL BEAMLINE BL7-1 23657.650 Cathepsin F 3.4.22.41 N97Q, N108Q, N170Q 2 man polymer 582.754 4-MORPHOLIN-4-YL-PIPERIDINE-1-CARBOXYLIC ACID [1-(3-BENZENESULFONYL-1-PROPYL-ALLYLCARBAMOYL)-2-PHENYLETHYL]-AMIDE 2 syn non-polymer 18.015 water 280 nat water CATSF no no APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG LETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLID HAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG LETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLID HAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Pichia sample CATF 9606 Homo sapiens 4922 Pichia pastoris GS115 plasmid pPIC9 1 2.18 43.66 VAPOR DIFFUSION, HANGING DROP 6.0 magnesium acetate, sodium cacodylate, pEG 8000, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K 290 software database_2 struct_conn struct_ref_seq_dif struct_sheet struct_site repository Initial release Version format compliance Version format compliance Non-polymer description Refinement description Database references Derived calculations 1 0 2003-07-15 1 1 2008-04-28 1 2 2011-07-13 1 3 2013-07-17 1 4 2017-10-11 1 5 2021-10-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_sheet.number_strands _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2002-07-15 REL REL MYP 4-MORPHOLIN-4-YL-PIPERIDINE-1-CARBOXYLIC ACID [1-(3-BENZENESULFONYL-1-PROPYL-ALLYLCARBAMOYL)-2-PHENYLETHYL]-AMIDE HOH water INH 1280 2 MYP MYP 1280 A INH 2280 2 MYP MYP 2280 B HOH 1 3 HOH HOH 1284 A HOH 2 3 HOH HOH 1285 A HOH 3 3 HOH HOH 1286 A HOH 4 3 HOH HOH 1287 A HOH 6 3 HOH HOH 1288 A HOH 9 3 HOH HOH 1289 A HOH 13 3 HOH HOH 1290 A HOH 15 3 HOH HOH 1291 A HOH 16 3 HOH HOH 1292 A HOH 17 3 HOH HOH 1293 A HOH 19 3 HOH HOH 1294 A HOH 21 3 HOH HOH 1295 A HOH 23 3 HOH HOH 1296 A HOH 25 3 HOH HOH 1297 A HOH 28 3 HOH HOH 1298 A HOH 30 3 HOH HOH 1299 A HOH 31 3 HOH HOH 1300 A HOH 34 3 HOH HOH 1301 A HOH 38 3 HOH HOH 1302 A HOH 40 3 HOH HOH 1303 A HOH 41 3 HOH HOH 1304 A HOH 42 3 HOH HOH 1305 A HOH 46 3 HOH HOH 1306 A HOH 49 3 HOH HOH 1307 A HOH 50 3 HOH HOH 1308 A HOH 51 3 HOH HOH 1309 A HOH 52 3 HOH HOH 1310 A HOH 53 3 HOH HOH 1311 A HOH 54 3 HOH HOH 1312 A HOH 57 3 HOH HOH 1313 A HOH 58 3 HOH HOH 1314 A HOH 60 3 HOH HOH 1315 A HOH 61 3 HOH HOH 1316 A HOH 63 3 HOH HOH 1317 A HOH 71 3 HOH HOH 1318 A HOH 72 3 HOH HOH 1319 A HOH 73 3 HOH HOH 1320 A HOH 76 3 HOH HOH 1321 A HOH 77 3 HOH HOH 1322 A HOH 80 3 HOH HOH 1323 A HOH 81 3 HOH HOH 1324 A HOH 82 3 HOH HOH 1325 A HOH 85 3 HOH HOH 1326 A HOH 86 3 HOH HOH 1327 A HOH 88 3 HOH HOH 1328 A HOH 89 3 HOH HOH 1329 A HOH 90 3 HOH HOH 1330 A HOH 91 3 HOH HOH 1331 A HOH 92 3 HOH HOH 1332 A HOH 94 3 HOH HOH 1333 A HOH 95 3 HOH HOH 1334 A HOH 98 3 HOH HOH 1335 A HOH 101 3 HOH HOH 1336 A HOH 102 3 HOH HOH 1337 A HOH 103 3 HOH HOH 1338 A HOH 104 3 HOH HOH 1339 A HOH 105 3 HOH HOH 1340 A HOH 107 3 HOH HOH 1341 A HOH 111 3 HOH HOH 1342 A HOH 114 3 HOH HOH 1343 A HOH 115 3 HOH HOH 1344 A HOH 117 3 HOH HOH 1345 A HOH 118 3 HOH HOH 1346 A HOH 120 3 HOH HOH 1347 A HOH 122 3 HOH HOH 1348 A HOH 124 3 HOH HOH 1349 A HOH 127 3 HOH HOH 1350 A HOH 128 3 HOH HOH 1351 A HOH 132 3 HOH HOH 1352 A HOH 133 3 HOH HOH 1353 A HOH 135 3 HOH HOH 1354 A HOH 136 3 HOH HOH 1355 A HOH 140 3 HOH HOH 1356 A HOH 143 3 HOH HOH 1357 A HOH 144 3 HOH HOH 1358 A HOH 147 3 HOH HOH 1359 A HOH 151 3 HOH HOH 1360 A HOH 153 3 HOH HOH 1361 A HOH 154 3 HOH HOH 1362 A HOH 156 3 HOH HOH 1363 A HOH 157 3 HOH HOH 1364 A HOH 159 3 HOH HOH 1365 A HOH 160 3 HOH HOH 1366 A HOH 167 3 HOH HOH 1367 A HOH 168 3 HOH HOH 1368 A HOH 169 3 HOH HOH 1369 A HOH 171 3 HOH HOH 1370 A HOH 174 3 HOH HOH 1371 A HOH 175 3 HOH HOH 1372 A HOH 178 3 HOH HOH 1373 A HOH 179 3 HOH HOH 1374 A HOH 182 3 HOH HOH 1375 A HOH 184 3 HOH HOH 1376 A HOH 187 3 HOH HOH 1377 A HOH 192 3 HOH HOH 1378 A HOH 193 3 HOH HOH 1379 A HOH 195 3 HOH HOH 1380 A HOH 196 3 HOH HOH 1381 A HOH 197 3 HOH HOH 1382 A HOH 198 3 HOH HOH 1383 A HOH 200 3 HOH HOH 1384 A HOH 204 3 HOH HOH 1385 A HOH 206 3 HOH HOH 1386 A HOH 207 3 HOH HOH 1387 A HOH 211 3 HOH HOH 1388 A HOH 214 3 HOH HOH 1389 A HOH 215 3 HOH HOH 1390 A HOH 217 3 HOH HOH 1391 A HOH 220 3 HOH HOH 1392 A HOH 221 3 HOH HOH 1393 A HOH 223 3 HOH HOH 1394 A HOH 224 3 HOH HOH 1395 A HOH 227 3 HOH HOH 1396 A HOH 229 3 HOH HOH 1397 A HOH 231 3 HOH HOH 1398 A HOH 235 3 HOH HOH 1399 A HOH 238 3 HOH HOH 1400 A HOH 240 3 HOH HOH 1401 A HOH 241 3 HOH HOH 1402 A HOH 242 3 HOH HOH 1403 A HOH 248 3 HOH HOH 1404 A HOH 249 3 HOH HOH 1405 A HOH 251 3 HOH HOH 1406 A HOH 252 3 HOH HOH 1407 A HOH 254 3 HOH HOH 1408 A HOH 255 3 HOH HOH 1409 A HOH 257 3 HOH HOH 1410 A HOH 262 3 HOH HOH 1411 A HOH 265 3 HOH HOH 1412 A HOH 266 3 HOH HOH 1413 A HOH 274 3 HOH HOH 1414 A HOH 275 3 HOH HOH 1415 A HOH 276 3 HOH HOH 1416 A HOH 278 3 HOH HOH 1417 A HOH 279 3 HOH HOH 1418 A HOH 282 3 HOH HOH 1419 A HOH 283 3 HOH HOH 1420 A HOH 284 3 HOH HOH 1421 A HOH 285 3 HOH HOH 1422 A HOH 286 3 HOH HOH 1423 A HOH 289 3 HOH HOH 1424 A HOH 290 3 HOH HOH 1425 A HOH 292 3 HOH HOH 1426 A HOH 5 3 HOH HOH 2281 B HOH 7 3 HOH HOH 2282 B HOH 8 3 HOH HOH 2283 B HOH 10 3 HOH HOH 2284 B HOH 11 3 HOH HOH 2285 B HOH 12 3 HOH HOH 2286 B HOH 14 3 HOH HOH 2287 B HOH 18 3 HOH HOH 2288 B HOH 20 3 HOH HOH 2289 B HOH 22 3 HOH HOH 2290 B HOH 24 3 HOH HOH 2291 B HOH 26 3 HOH HOH 2292 B HOH 27 3 HOH HOH 2293 B HOH 29 3 HOH HOH 2294 B HOH 32 3 HOH HOH 2295 B HOH 33 3 HOH HOH 2296 B HOH 35 3 HOH HOH 2297 B HOH 36 3 HOH HOH 2298 B HOH 37 3 HOH HOH 2299 B HOH 39 3 HOH HOH 2300 B HOH 43 3 HOH HOH 2301 B HOH 44 3 HOH HOH 2302 B HOH 45 3 HOH HOH 2303 B HOH 47 3 HOH HOH 2304 B HOH 48 3 HOH HOH 2305 B HOH 55 3 HOH HOH 2306 B HOH 56 3 HOH HOH 2307 B HOH 59 3 HOH HOH 2308 B HOH 62 3 HOH HOH 2309 B HOH 65 3 HOH HOH 2310 B HOH 66 3 HOH HOH 2311 B HOH 67 3 HOH HOH 2312 B HOH 68 3 HOH HOH 2313 B HOH 69 3 HOH HOH 2314 B HOH 70 3 HOH HOH 2315 B HOH 74 3 HOH HOH 2316 B HOH 75 3 HOH HOH 2317 B HOH 78 3 HOH HOH 2318 B HOH 79 3 HOH HOH 2319 B HOH 83 3 HOH HOH 2320 B HOH 84 3 HOH HOH 2321 B HOH 87 3 HOH HOH 2322 B HOH 93 3 HOH HOH 2323 B HOH 96 3 HOH HOH 2324 B HOH 97 3 HOH HOH 2325 B HOH 99 3 HOH HOH 2326 B HOH 100 3 HOH HOH 2327 B HOH 106 3 HOH HOH 2328 B HOH 108 3 HOH HOH 2329 B HOH 109 3 HOH HOH 2330 B HOH 110 3 HOH HOH 2331 B HOH 112 3 HOH HOH 2332 B HOH 113 3 HOH HOH 2333 B HOH 116 3 HOH HOH 2334 B HOH 119 3 HOH HOH 2335 B HOH 121 3 HOH HOH 2336 B HOH 125 3 HOH HOH 2337 B HOH 126 3 HOH HOH 2338 B HOH 129 3 HOH HOH 2339 B HOH 130 3 HOH HOH 2340 B HOH 131 3 HOH HOH 2341 B HOH 134 3 HOH HOH 2342 B HOH 138 3 HOH HOH 2343 B HOH 139 3 HOH HOH 2344 B HOH 141 3 HOH HOH 2345 B HOH 142 3 HOH HOH 2346 B HOH 145 3 HOH HOH 2347 B HOH 146 3 HOH HOH 2348 B HOH 148 3 HOH HOH 2349 B HOH 149 3 HOH HOH 2350 B HOH 150 3 HOH HOH 2351 B HOH 152 3 HOH HOH 2352 B HOH 158 3 HOH HOH 2353 B HOH 161 3 HOH HOH 2354 B HOH 162 3 HOH HOH 2355 B HOH 163 3 HOH HOH 2356 B HOH 164 3 HOH HOH 2357 B HOH 166 3 HOH HOH 2358 B HOH 170 3 HOH HOH 2359 B HOH 172 3 HOH HOH 2360 B HOH 173 3 HOH HOH 2361 B HOH 176 3 HOH HOH 2362 B HOH 177 3 HOH HOH 2363 B HOH 180 3 HOH HOH 2364 B HOH 181 3 HOH HOH 2365 B HOH 183 3 HOH HOH 2366 B HOH 185 3 HOH HOH 2367 B HOH 186 3 HOH HOH 2368 B HOH 188 3 HOH HOH 2369 B HOH 189 3 HOH HOH 2370 B HOH 190 3 HOH HOH 2371 B HOH 191 3 HOH HOH 2372 B HOH 194 3 HOH HOH 2373 B HOH 199 3 HOH HOH 2374 B HOH 201 3 HOH HOH 2375 B HOH 202 3 HOH HOH 2376 B HOH 203 3 HOH HOH 2377 B HOH 205 3 HOH HOH 2378 B HOH 208 3 HOH HOH 2379 B HOH 209 3 HOH HOH 2380 B HOH 210 3 HOH HOH 2381 B HOH 212 3 HOH HOH 2382 B HOH 213 3 HOH HOH 2383 B HOH 216 3 HOH HOH 2384 B HOH 219 3 HOH HOH 2385 B HOH 225 3 HOH HOH 2386 B HOH 226 3 HOH HOH 2387 B HOH 228 3 HOH HOH 2388 B HOH 232 3 HOH HOH 2389 B HOH 233 3 HOH HOH 2390 B HOH 234 3 HOH HOH 2391 B HOH 236 3 HOH HOH 2392 B HOH 237 3 HOH HOH 2393 B HOH 243 3 HOH HOH 2394 B HOH 244 3 HOH HOH 2395 B HOH 245 3 HOH HOH 2396 B HOH 246 3 HOH HOH 2397 B HOH 247 3 HOH HOH 2398 B HOH 250 3 HOH HOH 2399 B HOH 253 3 HOH HOH 2400 B HOH 256 3 HOH HOH 2401 B HOH 258 3 HOH HOH 2402 B HOH 259 3 HOH HOH 2403 B HOH 260 3 HOH HOH 2404 B HOH 264 3 HOH HOH 2405 B HOH 267 3 HOH HOH 2406 B HOH 269 3 HOH HOH 2407 B HOH 270 3 HOH HOH 2408 B HOH 271 3 HOH HOH 2409 B HOH 273 3 HOH HOH 2410 B HOH 277 3 HOH HOH 2411 B HOH 280 3 HOH HOH 2412 B HOH 281 3 HOH HOH 2413 B HOH 287 3 HOH HOH 2414 B HOH 288 3 HOH HOH 2415 B HOH 291 3 HOH HOH 2416 B HOH 293 3 HOH HOH 2417 B ALA 1 n 1 ALA 1 A PRO 2 n 2 PRO 2 A PRO 3 n 3 PRO 3 A GLU 4 n 4 GLU 4 A TRP 5 n 5 TRP 5 A ASP 6 n 6 ASP 6 A TRP 7 n 7 TRP 7 A ARG 8 n 8 ARG 8 A SER 9 n 9 SER 9 A LYS 10 n 10 LYS 10 A GLY 11 n 11 GLY 11 A ALA 12 n 12 ALA 12 A VAL 13 n 13 VAL 13 A THR 14 n 14 THR 14 A LYS 15 n 15 LYS 15 A VAL 16 n 16 VAL 16 A LYS 17 n 17 LYS 17 A ASP 18 n 18 ASP 18 A GLN 19 n 19 GLN 19 A GLY 20 n 20 GLY 20 A MET 21 n 21 MET 21 A CYS 22 n 22 CYS 22 A GLY 23 n 23 GLY 23 A SER 24 n 24 SER 24 A CYS 25 n 25 CYS 25 A TRP 26 n 26 TRP 26 A ALA 27 n 27 ALA 27 A PHE 28 n 28 PHE 28 A SER 29 n 29 SER 29 A VAL 30 n 30 VAL 30 A THR 31 n 31 THR 31 A GLY 32 n 32 GLY 32 A ASN 33 n 33 ASN 33 A VAL 34 n 34 VAL 34 A GLU 35 n 35 GLU 35 A GLY 36 n 36 GLY 36 A GLN 37 n 37 GLN 37 A TRP 38 n 38 TRP 38 A PHE 39 n 39 PHE 39 A LEU 40 n 40 LEU 40 A ASN 41 n 41 ASN 41 A GLN 42 n 42 GLN 42 A GLY 43 n 43 GLY 43 A THR 44 n 44 THR 44 A LEU 45 n 45 LEU 45 A LEU 46 n 46 LEU 46 A SER 47 n 47 SER 47 A LEU 48 n 48 LEU 48 A SER 49 n 49 SER 49 A GLU 50 n 50 GLU 50 A GLN 51 n 51 GLN 51 A GLU 52 n 52 GLU 52 A LEU 53 n 53 LEU 53 A LEU 54 n 54 LEU 54 A ASP 55 n 55 ASP 55 A CYS 56 n 56 CYS 56 A ASP 57 n 57 ASP 57 A LYS 58 n 58 LYS 58 A MET 59 n 59 MET 59 A ASP 60 n 60 ASP 60 A LYS 61 n 61 LYS 61 A ALA 62 n 62 ALA 62 A CYS 63 n 63 CYS 63 A MET 64 n 64 MET 64 A GLY 65 n 65 GLY 65 A GLY 66 n 66 GLY 66 A LEU 67 n 67 LEU 67 A PRO 68 n 68 PRO 68 A SER 69 n 69 SER 69 A ASN 70 n 70 ASN 70 A ALA 71 n 71 ALA 71 A TYR 72 n 72 TYR 72 A SER 73 n 73 SER 73 A ALA 74 n 74 ALA 74 A ILE 75 n 75 ILE 75 A LYS 76 n 76 LYS 76 A ASN 78 n 77 ASN 78 A LEU 78 n 78 A LEU 78 A GLY 78 n 79 B GLY 78 A GLY 79 n 80 GLY 79 A LEU 80 n 81 LEU 80 A GLU 81 n 82 GLU 81 A THR 82 n 83 THR 82 A GLU 83 n 84 GLU 83 A ASP 84 n 85 ASP 84 A ASP 85 n 86 ASP 85 A TYR 86 n 87 TYR 86 A SER 87 n 88 SER 87 A TYR 88 n 89 TYR 88 A GLN 89 n 90 GLN 89 A GLY 89 n 91 A GLY 89 A HIS 91 n 92 HIS 91 A MET 92 n 93 MET 92 A GLN 93 n 94 GLN 93 A SER 94 n 95 SER 94 A CYS 95 n 96 CYS 95 A GLN 96 n 97 GLN 96 A PHE 97 n 98 PHE 97 A SER 98 n 99 SER 98 A ALA 99 n 100 ALA 99 A GLU 100 n 101 GLU 100 A LYS 101 n 102 LYS 101 A ALA 102 n 103 ALA 102 A LYS 103 n 104 LYS 103 A VAL 105 n 105 VAL 105 A TYR 106 n 106 TYR 106 A ILE 107 n 107 ILE 107 A GLN 108 n 108 GLN 108 A ASP 109 n 109 ASP 109 A SER 110 n 110 SER 110 A VAL 111 n 111 VAL 111 A GLU 112 n 112 GLU 112 A LEU 113 n 113 LEU 113 A SER 114 n 114 SER 114 A GLN 115 n 115 GLN 115 A ASN 116 n 116 ASN 116 A GLU 117 n 117 GLU 117 A GLN 118 n 118 GLN 118 A LYS 119 n 119 LYS 119 A LEU 120 n 120 LEU 120 A ALA 121 n 121 ALA 121 A ALA 122 n 122 ALA 122 A TRP 123 n 123 TRP 123 A LEU 124 n 124 LEU 124 A ALA 125 n 125 ALA 125 A LYS 126 n 126 LYS 126 A ARG 127 n 127 ARG 127 A GLY 128 n 128 GLY 128 A PRO 129 n 129 PRO 129 A ILE 130 n 130 ILE 130 A SER 131 n 131 SER 131 A VAL 132 n 132 VAL 132 A ALA 133 n 133 ALA 133 A ILE 134 n 134 ILE 134 A ASN 135 n 135 ASN 135 A ALA 136 n 136 ALA 136 A PHE 139 n 137 PHE 139 A GLY 140 n 138 GLY 140 A MET 141 n 139 MET 141 A GLN 142 n 140 GLN 142 A PHE 143 n 141 PHE 143 A TYR 144 n 142 TYR 144 A ARG 145 n 143 ARG 145 A HIS 146 n 144 HIS 146 A GLY 147 n 145 GLY 147 A ILE 148 n 146 ILE 148 A SER 149 n 147 SER 149 A ARG 152 n 148 ARG 152 A PRO 153 n 149 PRO 153 A LEU 154 n 150 A LEU 154 A ARG 155 n 151 A ARG 155 A PRO 156 n 152 A PRO 156 A LEU 152 n 153 B LEU 152 A CYS 153 n 154 A CYS 153 A SER 154 n 155 SER 154 A PRO 155 n 156 PRO 155 A TRP 156 n 157 TRP 156 A LEU 156 n 158 B LEU 156 A ILE 157 n 159 ILE 157 A ASP 158 n 160 ASP 158 A HIS 159 n 161 HIS 159 A ALA 160 n 162 ALA 160 A VAL 161 n 163 VAL 161 A LEU 162 n 164 LEU 162 A LEU 163 n 165 LEU 163 A VAL 164 n 166 VAL 164 A GLY 165 n 167 GLY 165 A TYR 166 n 168 TYR 166 A GLY 167 n 169 GLY 167 A GLN 167 n 170 A GLN 167 A ARG 167 n 171 B ARG 167 A SER 167 n 172 C SER 167 A ASP 167 n 173 D ASP 167 A VAL 168 n 174 VAL 168 A PRO 169 n 175 PRO 169 A PHE 170 n 176 PHE 170 A TRP 171 n 177 TRP 171 A ALA 172 n 178 ALA 172 A ILE 173 n 179 ILE 173 A LYS 174 n 180 LYS 174 A ASN 175 n 181 ASN 175 A SER 176 n 182 SER 176 A TRP 177 n 183 TRP 177 A GLY 178 n 184 GLY 178 A THR 179 n 185 THR 179 A ASP 180 n 186 ASP 180 A TRP 181 n 187 TRP 181 A GLY 182 n 188 GLY 182 A GLU 183 n 189 GLU 183 A LYS 184 n 190 LYS 184 A GLY 185 n 191 GLY 185 A TYR 186 n 192 TYR 186 A TYR 187 n 193 TYR 187 A TYR 188 n 194 TYR 188 A LEU 189 n 195 LEU 189 A HIS 190 n 196 HIS 190 A ARG 191 n 197 ARG 191 A GLY 192 n 198 GLY 192 A SER 193 n 199 SER 193 A GLY 198 n 200 GLY 198 A ALA 199 n 201 ALA 199 A CYS 200 n 202 CYS 200 A GLY 201 n 203 GLY 201 A VAL 202 n 204 VAL 202 A ASN 203 n 205 ASN 203 A THR 204 n 206 THR 204 A MET 205 n 207 MET 205 A ALA 206 n 208 ALA 206 A SER 207 n 209 SER 207 A SER 208 n 210 SER 208 A ALA 209 n 211 ALA 209 A VAL 210 n 212 VAL 210 A VAL 211 n 213 VAL 211 A ASP 212 n 214 ASP 212 A ALA 1 n 1 ALA 1 B PRO 2 n 2 PRO 2 B PRO 3 n 3 PRO 3 B GLU 4 n 4 GLU 4 B TRP 5 n 5 TRP 5 B ASP 6 n 6 ASP 6 B TRP 7 n 7 TRP 7 B ARG 8 n 8 ARG 8 B SER 9 n 9 SER 9 B LYS 10 n 10 LYS 10 B GLY 11 n 11 GLY 11 B ALA 12 n 12 ALA 12 B VAL 13 n 13 VAL 13 B THR 14 n 14 THR 14 B LYS 15 n 15 LYS 15 B VAL 16 n 16 VAL 16 B LYS 17 n 17 LYS 17 B ASP 18 n 18 ASP 18 B GLN 19 n 19 GLN 19 B GLY 20 n 20 GLY 20 B MET 21 n 21 MET 21 B CYS 22 n 22 CYS 22 B GLY 23 n 23 GLY 23 B SER 24 n 24 SER 24 B CYS 25 n 25 CYS 25 B TRP 26 n 26 TRP 26 B ALA 27 n 27 ALA 27 B PHE 28 n 28 PHE 28 B SER 29 n 29 SER 29 B VAL 30 n 30 VAL 30 B THR 31 n 31 THR 31 B GLY 32 n 32 GLY 32 B ASN 33 n 33 ASN 33 B VAL 34 n 34 VAL 34 B GLU 35 n 35 GLU 35 B GLY 36 n 36 GLY 36 B GLN 37 n 37 GLN 37 B TRP 38 n 38 TRP 38 B PHE 39 n 39 PHE 39 B LEU 40 n 40 LEU 40 B ASN 41 n 41 ASN 41 B GLN 42 n 42 GLN 42 B GLY 43 n 43 GLY 43 B THR 44 n 44 THR 44 B LEU 45 n 45 LEU 45 B LEU 46 n 46 LEU 46 B SER 47 n 47 SER 47 B LEU 48 n 48 LEU 48 B SER 49 n 49 SER 49 B GLU 50 n 50 GLU 50 B GLN 51 n 51 GLN 51 B GLU 52 n 52 GLU 52 B LEU 53 n 53 LEU 53 B LEU 54 n 54 LEU 54 B ASP 55 n 55 ASP 55 B CYS 56 n 56 CYS 56 B ASP 57 n 57 ASP 57 B LYS 58 n 58 LYS 58 B MET 59 n 59 MET 59 B ASP 60 n 60 ASP 60 B LYS 61 n 61 LYS 61 B ALA 62 n 62 ALA 62 B CYS 63 n 63 CYS 63 B MET 64 n 64 MET 64 B GLY 65 n 65 GLY 65 B GLY 66 n 66 GLY 66 B LEU 67 n 67 LEU 67 B PRO 68 n 68 PRO 68 B SER 69 n 69 SER 69 B ASN 70 n 70 ASN 70 B ALA 71 n 71 ALA 71 B TYR 72 n 72 TYR 72 B SER 73 n 73 SER 73 B ALA 74 n 74 ALA 74 B ILE 75 n 75 ILE 75 B LYS 76 n 76 LYS 76 B ASN 78 n 77 ASN 78 B LEU 78 n 78 A LEU 78 B GLY 78 n 79 B GLY 78 B GLY 79 n 80 GLY 79 B LEU 80 n 81 LEU 80 B GLU 81 n 82 GLU 81 B THR 82 n 83 THR 82 B GLU 83 n 84 GLU 83 B ASP 84 n 85 ASP 84 B ASP 85 n 86 ASP 85 B TYR 86 n 87 TYR 86 B SER 87 n 88 SER 87 B TYR 88 n 89 TYR 88 B GLN 89 n 90 GLN 89 B GLY 89 n 91 A GLY 89 B HIS 91 n 92 HIS 91 B MET 92 n 93 MET 92 B GLN 93 n 94 GLN 93 B SER 94 n 95 SER 94 B CYS 95 n 96 CYS 95 B GLN 96 n 97 GLN 96 B PHE 97 n 98 PHE 97 B SER 98 n 99 SER 98 B ALA 99 n 100 ALA 99 B GLU 100 n 101 GLU 100 B LYS 101 n 102 LYS 101 B ALA 102 n 103 ALA 102 B LYS 103 n 104 LYS 103 B VAL 105 n 105 VAL 105 B TYR 106 n 106 TYR 106 B ILE 107 n 107 ILE 107 B GLN 108 n 108 GLN 108 B ASP 109 n 109 ASP 109 B SER 110 n 110 SER 110 B VAL 111 n 111 VAL 111 B GLU 112 n 112 GLU 112 B LEU 113 n 113 LEU 113 B SER 114 n 114 SER 114 B GLN 115 n 115 GLN 115 B ASN 116 n 116 ASN 116 B GLU 117 n 117 GLU 117 B GLN 118 n 118 GLN 118 B LYS 119 n 119 LYS 119 B LEU 120 n 120 LEU 120 B ALA 121 n 121 ALA 121 B ALA 122 n 122 ALA 122 B TRP 123 n 123 TRP 123 B LEU 124 n 124 LEU 124 B ALA 125 n 125 ALA 125 B LYS 126 n 126 LYS 126 B ARG 127 n 127 ARG 127 B GLY 128 n 128 GLY 128 B PRO 129 n 129 PRO 129 B ILE 130 n 130 ILE 130 B SER 131 n 131 SER 131 B VAL 132 n 132 VAL 132 B ALA 133 n 133 ALA 133 B ILE 134 n 134 ILE 134 B ASN 135 n 135 ASN 135 B ALA 136 n 136 ALA 136 B PHE 139 n 137 PHE 139 B GLY 140 n 138 GLY 140 B MET 141 n 139 MET 141 B GLN 142 n 140 GLN 142 B PHE 143 n 141 PHE 143 B TYR 144 n 142 TYR 144 B ARG 145 n 143 ARG 145 B HIS 146 n 144 HIS 146 B GLY 147 n 145 GLY 147 B ILE 148 n 146 ILE 148 B SER 149 n 147 SER 149 B ARG 152 n 148 ARG 152 B PRO 153 n 149 PRO 153 B LEU 154 n 150 A LEU 154 B ARG 155 n 151 A ARG 155 B PRO 156 n 152 A PRO 156 B LEU 152 n 153 B LEU 152 B CYS 153 n 154 A CYS 153 B SER 154 n 155 SER 154 B PRO 155 n 156 PRO 155 B TRP 156 n 157 TRP 156 B LEU 156 n 158 B LEU 156 B ILE 157 n 159 ILE 157 B ASP 158 n 160 ASP 158 B HIS 159 n 161 HIS 159 B ALA 160 n 162 ALA 160 B VAL 161 n 163 VAL 161 B LEU 162 n 164 LEU 162 B LEU 163 n 165 LEU 163 B VAL 164 n 166 VAL 164 B GLY 165 n 167 GLY 165 B TYR 166 n 168 TYR 166 B GLY 167 n 169 GLY 167 B GLN 167 n 170 A GLN 167 B ARG 167 n 171 B ARG 167 B SER 167 n 172 C SER 167 B ASP 167 n 173 D ASP 167 B VAL 168 n 174 VAL 168 B PRO 169 n 175 PRO 169 B PHE 170 n 176 PHE 170 B TRP 171 n 177 TRP 171 B ALA 172 n 178 ALA 172 B ILE 173 n 179 ILE 173 B LYS 174 n 180 LYS 174 B ASN 175 n 181 ASN 175 B SER 176 n 182 SER 176 B TRP 177 n 183 TRP 177 B GLY 178 n 184 GLY 178 B THR 179 n 185 THR 179 B ASP 180 n 186 ASP 180 B TRP 181 n 187 TRP 181 B GLY 182 n 188 GLY 182 B GLU 183 n 189 GLU 183 B LYS 184 n 190 LYS 184 B GLY 185 n 191 GLY 185 B TYR 186 n 192 TYR 186 B TYR 187 n 193 TYR 187 B TYR 188 n 194 TYR 188 B LEU 189 n 195 LEU 189 B HIS 190 n 196 HIS 190 B ARG 191 n 197 ARG 191 B GLY 192 n 198 GLY 192 B SER 193 n 199 SER 193 B GLY 198 n 200 GLY 198 B ALA 199 n 201 ALA 199 B CYS 200 n 202 CYS 200 B GLY 201 n 203 GLY 201 B VAL 202 n 204 VAL 202 B ASN 203 n 205 ASN 203 B THR 204 n 206 THR 204 B MET 205 n 207 MET 205 B ALA 206 n 208 ALA 206 B SER 207 n 209 SER 207 B SER 208 n 210 SER 208 B ALA 209 n 211 ALA 209 B VAL 210 n 212 VAL 210 B VAL 211 n 213 VAL 211 B ASP 212 n 214 ASP 212 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 149 A N SER 147 A O TYR 188 A O TYR 194 A O TYR 187 A O TYR 193 A N ILE 173 A N ILE 179 A O TYR 166 A O TYR 168 A N TRP 5 A N TRP 5 A N SER 149 A N SER 147 A O TYR 188 A O TYR 194 A O TYR 187 A O TYR 193 A N ILE 173 A N ILE 179 A O LEU 163 A O LEU 165 A N ILE 130 A N ILE 130 A N ASP 109 A N ASP 109 A O VAL 210 A O VAL 212 B N SER 149 B N SER 147 B O TYR 188 B O TYR 194 B O TYR 187 B O TYR 193 B N ILE 173 B N ILE 179 B O TYR 166 B O TYR 168 B N TRP 5 B N TRP 5 B N SER 149 B N SER 147 B O TYR 188 B O TYR 194 B O TYR 187 B O TYR 193 B N ILE 173 B N ILE 179 B O LEU 163 B O LEU 165 B N ILE 130 B N ILE 130 B N VAL 111 B N VAL 111 B O SER 208 B O SER 210 1 A ALA 62 45.95 -118.12 1 A ASP 109 -172.83 -169.73 1 A ARG 152 -156.62 72.60 1 A ASP 158 -140.50 -1.14 1 B ALA 62 46.87 -117.56 1 B TYR 86 -156.53 75.21 1 B ARG 145 -125.82 -52.60 1 B ASP 158 -151.33 16.66 1 B VAL 161 -138.35 -159.77 20.6 -7.72 0.00 0.00 -2.98 0.00 10.71 0.222 0.003 0.195 0.198 0.198 1.7 50.0 4088 41277 9.9 93.7 RANDOM 1 restrained THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB entry 1F2A Engh & Huber 0.22 0.19 5 0.19 0.19 1.7 50.0 280 3684 82 0 3322 0.005 1.3 23.8 0.72 0.289 0.013 0.272 1.81 498 4565 5063 6 9.8 66.6 15.1 1.7 50.0 1M6D 43466 43466 0.0 -3 0.086 1 32 13.6 93.7 1.7 1.73 3.5 0.43 1 64.5 data collection MAR345 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNX Crystal structure of human cathepsin F 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A ARG 8 A ARG 8 HELX_P A GLY 11 A GLY 11 5 1 4 A SER 24 A SER 24 HELX_P A GLY 43 A GLY 43 1 2 20 A SER 49 A SER 49 HELX_P A ASP 57 A ASP 57 1 3 9 A LYS 61 A LYS 61 HELX_P A GLY 65 A GLY 65 5 4 5 A LEU 67 A LEU 67 HELX_P A GLY 78 A GLY 79 1 5 13 B A SER 98 A SER 99 HELX_P A ALA 102 A ALA 103 5 6 5 A ASN 116 A ASN 116 HELX_P A GLY 128 A GLY 128 1 7 13 A ALA 136 A ALA 136 HELX_P A TYR 144 A TYR 142 1 8 7 A LEU 154 A LEU 150 HELX_P A CYS 153 A CYS 154 5 9 5 A A A GLY 198 A GLY 200 HELX_P A VAL 202 A VAL 204 5 10 5 B ARG 8 B ARG 8 HELX_P B GLY 11 B GLY 11 5 11 4 B SER 24 B SER 24 HELX_P B GLY 43 B GLY 43 1 12 20 B SER 49 B SER 49 HELX_P B ASP 57 B ASP 57 1 13 9 B LYS 61 B LYS 61 HELX_P B GLY 65 B GLY 65 5 14 5 B LEU 67 B LEU 67 HELX_P B GLY 78 B GLY 79 1 15 13 B B ASN 116 B ASN 116 HELX_P B GLY 128 B GLY 128 1 16 13 B ASN 135 B ASN 135 HELX_P B MET 141 B MET 139 5 17 5 B LEU 154 B LEU 150 HELX_P B ILE 157 B ILE 159 5 18 10 A B GLY 198 B GLY 200 HELX_P B VAL 202 B VAL 204 5 19 5 disulf 2.032 A CYS 22 A SG CYS 22 1_555 A CYS 63 A SG CYS 63 1_555 disulf 2.040 A CYS 56 A SG CYS 56 1_555 A CYS 95 A SG CYS 96 1_555 disulf 2.038 A A CYS 153 A SG CYS 154 1_555 A CYS 200 A SG CYS 202 1_555 disulf 2.032 B CYS 22 B SG CYS 22 1_555 B CYS 63 B SG CYS 63 1_555 disulf 2.035 B CYS 56 B SG CYS 56 1_555 B CYS 95 B SG CYS 96 1_555 disulf 2.038 A B CYS 153 B SG CYS 154 1_555 B CYS 200 B SG CYS 202 1_555 covale 1.824 none A CYS 25 A SG CYS 25 1_555 A MYP 1280 C CT MYP 1_555 covale 1.808 none B CYS 25 B SG CYS 25 1_555 B MYP 2280 D CT MYP 1_555 HYDROLASE papain family cysteine protease, HYDROLASE CATF_HUMAN UNP 1 271 Q9UBX1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG LETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLID HAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 271 484 1M6D 1 212 Q9UBX1 A 1 1 214 271 484 1M6D 1 212 Q9UBX1 B 1 1 214 1 ASN engineered mutation GLN 96 1M6D A Q9UBX1 UNP 367 97 1 ASN engineered mutation GLN 108 1M6D A Q9UBX1 UNP 378 108 1 ASN engineered mutation GLN 167 1M6D A A Q9UBX1 UNP 440 170 2 ASN engineered mutation GLN 96 1M6D B Q9UBX1 UNP 367 97 2 ASN engineered mutation GLN 108 1M6D B Q9UBX1 UNP 378 108 2 ASN engineered mutation GLN 167 1M6D A B Q9UBX1 UNP 440 170 4 4 2 4 4 2 parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A ILE 148 A ILE 146 A SER 149 A SER 147 A TYR 186 A TYR 192 A HIS 190 A HIS 196 A VAL 168 A VAL 174 A LYS 174 A LYS 180 A TRP 5 A TRP 5 A ASP 6 A ASP 6 A ILE 148 A ILE 146 A SER 149 A SER 147 A TYR 186 A TYR 192 A HIS 190 A HIS 196 A VAL 168 A VAL 174 A LYS 174 A LYS 180 A ILE 130 A ILE 130 A ILE 134 A ILE 134 A ASP 109 A ASP 109 A GLU 112 A GLU 112 A SER 207 A SER 209 A VAL 210 A VAL 212 B ILE 148 B ILE 146 B SER 149 B SER 147 B TYR 186 B TYR 192 B HIS 190 B HIS 196 B VAL 168 B VAL 174 B LYS 174 B LYS 180 B TRP 5 B TRP 5 B ASP 6 B ASP 6 B ILE 148 B ILE 146 B SER 149 B SER 147 B TYR 186 B TYR 192 B HIS 190 B HIS 196 B VAL 168 B VAL 174 B LYS 174 B LYS 180 B ILE 130 B ILE 130 B ILE 134 B ILE 134 B ILE 107 B ILE 107 B GLU 112 B GLU 112 B SER 207 B SER 209 B VAL 211 B VAL 213 BINDING SITE FOR RESIDUE MYP A 1280 A MYP 1280 Software 21 BINDING SITE FOR RESIDUE MYP B 2280 B MYP 2280 Software 20 A GLN 19 A GLN 19 21 1_555 A GLY 23 A GLY 23 21 1_555 A CYS 25 A CYS 25 21 1_555 A TRP 26 A TRP 26 21 1_555 A GLY 65 A GLY 65 21 1_555 A GLY 66 A GLY 66 21 1_555 A LEU 67 A LEU 67 21 1_555 A GLN 142 A GLN 140 21 1_555 A LEU 152 A LEU 153 B 21 2_555 A SER 154 A SER 155 21 2_555 A PRO 156 A PRO 152 A 21 2_555 A LEU 156 A LEU 158 B 21 2_555 A ILE 157 A ILE 159 21 1_555 A ASP 158 A ASP 160 21 1_555 A HIS 159 A HIS 161 21 1_555 A TRP 177 A TRP 183 21 1_555 A HOH 1302 E HOH 21 2_555 A HOH 1312 E HOH 21 1_555 B TRP 156 B TRP 157 21 4_455 B PRO 156 B PRO 152 A 21 3_545 B HOH 2292 F HOH 21 4_455 A SER 73 A SER 73 20 4_555 A ASN 78 A ASN 77 20 4_555 B GLN 19 B GLN 19 20 1_555 B GLY 23 B GLY 23 20 1_555 B CYS 25 B CYS 25 20 1_555 B TRP 26 B TRP 26 20 1_555 B MET 64 B MET 64 20 1_555 B GLY 65 B GLY 65 20 1_555 B GLY 66 B GLY 66 20 1_555 B LEU 67 B LEU 67 20 1_555 B ALA 133 B ALA 133 20 1_555 B PHE 143 B PHE 141 20 2_665 B ILE 157 B ILE 159 20 1_555 B ASP 158 B ASP 160 20 1_555 B HIS 159 B HIS 161 20 1_555 B TRP 177 B TRP 183 20 1_555 B MET 205 B MET 207 20 1_555 B HOH 2365 F HOH 20 1_555 B HOH 2380 F HOH 20 1_555 B HOH 2399 F HOH 20 1_555 18 P 21 21 2