0.010794
0.000000
0.000000
0.000000
0.010794
0.000000
0.000000
0.000000
0.011721
0.00000
0.00000
0.00000
Roberts, D.L.
Weix, D.J.
Dahms, N.M.
Kim, J.J.-P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
92.641
92.641
85.316
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H13 O9 P
260.136
n
6-O-phosphono-alpha-D-mannopyranose
ALPHA-D-MANNOSE-6-PHOSPHATE; 6-O-phosphono-alpha-D-mannose; 6-O-phosphono-D-mannose; 6-O-phosphono-mannose
D-saccharide, alpha linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
93
639
648
10.1016/S0092-8674(00)81192-7
9604938
Molecular basis of lysosomal enzyme recognition: three-dimensional structure of the cation-dependent mannose 6-phosphate receptor.
1998
10.2210/pdb1m6p/pdb
pdb_00001m6p
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277
1
COLLIMATOR
IMAGE PLATE
1997-04
RIGAKU RAXIS II
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
17213.363
CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR
EXTRACYTOPLASMIC DOMAIN
N31Q, N57Q, N68Q, N87Q
2
man
polymer
54.938
MANGANESE (II) ION
2
syn
non-polymer
260.136
6-O-phosphono-alpha-D-mannopyranose
2
syn
non-polymer
18.015
water
145
nat
water
CDMPR
no
no
EKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRFNE
TQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS
EKTCDLVGEKGKESEKELALLKRLTPLFQKSFESTVGQSPDMYSYVFRVCREAGQHSSGAGLVQIQKSNGKETVVGRFNE
TQIFQGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVSEERGKVQDCFYLFEMDSSLACS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
cabbage looper
Trichoplusia
sample
5B1-4
9913
Bos taurus
5B1-4
7111
Trichoplusia ni
BACULOVIRUS
1
2.4
45
6.5
pH 6.5
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_site
struct_site_gen
chem_comp
database_2
struct_ref_seq_dif
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Data collection
Derived calculations
Structure summary
Database references
Structure summary
1
0
1999-04-27
1
1
2008-03-24
1
2
2011-07-13
1
3
2020-07-29
1
4
2021-11-03
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
a-D-Manp6PO3
Y
BNL
1998-04-19
REL
MN
MANGANESE (II) ION
M6P
6-O-phosphono-alpha-D-mannopyranose
HOH
water
MN
199
2
MN
MN
199
A
M6P
200
3
M6P
M6P
200
A
MN
199
2
MN
MN
199
B
M6P
200
3
M6P
M6P
200
B
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
505
4
HOH
HOH
505
A
HOH
507
4
HOH
HOH
507
A
HOH
509
4
HOH
HOH
509
A
HOH
511
4
HOH
HOH
511
A
HOH
512
4
HOH
HOH
512
A
HOH
515
4
HOH
HOH
515
A
HOH
516
4
HOH
HOH
516
A
HOH
518
4
HOH
HOH
518
A
HOH
520
4
HOH
HOH
520
A
HOH
522
4
HOH
HOH
522
A
HOH
524
4
HOH
HOH
524
A
HOH
526
4
HOH
HOH
526
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
533
4
HOH
HOH
533
A
HOH
534
4
HOH
HOH
534
A
HOH
536
4
HOH
HOH
536
A
HOH
537
4
HOH
HOH
537
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
545
4
HOH
HOH
545
A
HOH
547
4
HOH
HOH
547
A
HOH
549
4
HOH
HOH
549
A
HOH
552
4
HOH
HOH
552
A
HOH
555
4
HOH
HOH
555
A
HOH
557
4
HOH
HOH
557
A
HOH
561
4
HOH
HOH
561
A
HOH
562
4
HOH
HOH
562
A
HOH
564
4
HOH
HOH
564
A
HOH
565
4
HOH
HOH
565
A
HOH
573
4
HOH
HOH
573
A
HOH
574
4
HOH
HOH
574
A
HOH
577
4
HOH
HOH
577
A
HOH
579
4
HOH
HOH
579
A
HOH
580
4
HOH
HOH
580
A
HOH
581
4
HOH
HOH
581
A
HOH
583
4
HOH
HOH
583
A
HOH
585
4
HOH
HOH
585
A
HOH
586
4
HOH
HOH
586
A
HOH
587
4
HOH
HOH
587
A
HOH
588
4
HOH
HOH
588
A
HOH
589
4
HOH
HOH
589
A
HOH
593
4
HOH
HOH
593
A
HOH
595
4
HOH
HOH
595
A
HOH
596
4
HOH
HOH
596
A
HOH
597
4
HOH
HOH
597
A
HOH
598
4
HOH
HOH
598
A
HOH
599
4
HOH
HOH
599
A
HOH
603
4
HOH
HOH
603
A
HOH
604
4
HOH
HOH
604
A
HOH
606
4
HOH
HOH
606
A
HOH
609
4
HOH
HOH
609
A
HOH
610
4
HOH
HOH
610
A
HOH
613
4
HOH
HOH
613
A
HOH
614
4
HOH
HOH
614
A
HOH
618
4
HOH
HOH
618
A
HOH
621
4
HOH
HOH
621
A
HOH
623
4
HOH
HOH
623
A
HOH
626
4
HOH
HOH
626
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
629
4
HOH
HOH
629
A
HOH
632
4
HOH
HOH
632
A
HOH
636
4
HOH
HOH
636
A
HOH
637
4
HOH
HOH
637
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
644
4
HOH
HOH
644
A
HOH
645
4
HOH
HOH
645
A
HOH
504
4
HOH
HOH
504
B
HOH
506
4
HOH
HOH
506
B
HOH
508
4
HOH
HOH
508
B
HOH
510
4
HOH
HOH
510
B
HOH
513
4
HOH
HOH
513
B
HOH
514
4
HOH
HOH
514
B
HOH
517
4
HOH
HOH
517
B
HOH
519
4
HOH
HOH
519
B
HOH
521
4
HOH
HOH
521
B
HOH
523
4
HOH
HOH
523
B
HOH
525
4
HOH
HOH
525
B
HOH
527
4
HOH
HOH
527
B
HOH
528
4
HOH
HOH
528
B
HOH
529
4
HOH
HOH
529
B
HOH
532
4
HOH
HOH
532
B
HOH
535
4
HOH
HOH
535
B
HOH
538
4
HOH
HOH
538
B
HOH
542
4
HOH
HOH
542
B
HOH
543
4
HOH
HOH
543
B
HOH
544
4
HOH
HOH
544
B
HOH
546
4
HOH
HOH
546
B
HOH
548
4
HOH
HOH
548
B
HOH
550
4
HOH
HOH
550
B
HOH
551
4
HOH
HOH
551
B
HOH
553
4
HOH
HOH
553
B
HOH
554
4
HOH
HOH
554
B
HOH
556
4
HOH
HOH
556
B
HOH
558
4
HOH
HOH
558
B
HOH
559
4
HOH
HOH
559
B
HOH
560
4
HOH
HOH
560
B
HOH
563
4
HOH
HOH
563
B
HOH
566
4
HOH
HOH
566
B
HOH
567
4
HOH
HOH
567
B
HOH
568
4
HOH
HOH
568
B
HOH
569
4
HOH
HOH
569
B
HOH
570
4
HOH
HOH
570
B
HOH
571
4
HOH
HOH
571
B
HOH
572
4
HOH
HOH
572
B
HOH
575
4
HOH
HOH
575
B
HOH
576
4
HOH
HOH
576
B
HOH
578
4
HOH
HOH
578
B
HOH
582
4
HOH
HOH
582
B
HOH
584
4
HOH
HOH
584
B
HOH
590
4
HOH
HOH
590
B
HOH
591
4
HOH
HOH
591
B
HOH
592
4
HOH
HOH
592
B
HOH
594
4
HOH
HOH
594
B
HOH
600
4
HOH
HOH
600
B
HOH
601
4
HOH
HOH
601
B
HOH
602
4
HOH
HOH
602
B
HOH
605
4
HOH
HOH
605
B
HOH
607
4
HOH
HOH
607
B
HOH
608
4
HOH
HOH
608
B
HOH
611
4
HOH
HOH
611
B
HOH
612
4
HOH
HOH
612
B
HOH
615
4
HOH
HOH
615
B
HOH
616
4
HOH
HOH
616
B
HOH
617
4
HOH
HOH
617
B
HOH
619
4
HOH
HOH
619
B
HOH
620
4
HOH
HOH
620
B
HOH
622
4
HOH
HOH
622
B
HOH
624
4
HOH
HOH
624
B
HOH
625
4
HOH
HOH
625
B
HOH
630
4
HOH
HOH
630
B
HOH
631
4
HOH
HOH
631
B
HOH
633
4
HOH
HOH
633
B
HOH
634
4
HOH
HOH
634
B
HOH
635
4
HOH
HOH
635
B
HOH
638
4
HOH
HOH
638
B
HOH
639
4
HOH
HOH
639
B
HOH
640
4
HOH
HOH
640
B
HOH
643
4
HOH
HOH
643
B
GLU
3
n
1
GLU
3
A
LYS
4
n
2
LYS
4
A
THR
5
n
3
THR
5
A
CYS
6
n
4
CYS
6
A
ASP
7
n
5
ASP
7
A
LEU
8
n
6
LEU
8
A
VAL
9
n
7
VAL
9
A
GLY
10
n
8
GLY
10
A
GLU
11
n
9
GLU
11
A
LYS
12
n
10
LYS
12
A
GLY
13
n
11
GLY
13
A
LYS
14
n
12
LYS
14
A
GLU
15
n
13
GLU
15
A
SER
16
n
14
SER
16
A
GLU
17
n
15
GLU
17
A
LYS
18
n
16
LYS
18
A
GLU
19
n
17
GLU
19
A
LEU
20
n
18
LEU
20
A
ALA
21
n
19
ALA
21
A
LEU
22
n
20
LEU
22
A
LEU
23
n
21
LEU
23
A
LYS
24
n
22
LYS
24
A
ARG
25
n
23
ARG
25
A
LEU
26
n
24
LEU
26
A
THR
27
n
25
THR
27
A
PRO
28
n
26
PRO
28
A
LEU
29
n
27
LEU
29
A
PHE
30
n
28
PHE
30
A
GLN
31
n
29
GLN
31
A
LYS
32
n
30
LYS
32
A
SER
33
n
31
SER
33
A
PHE
34
n
32
PHE
34
A
GLU
35
n
33
GLU
35
A
SER
36
n
34
SER
36
A
THR
37
n
35
THR
37
A
n
36
38
A
n
37
39
A
n
38
40
A
n
39
41
A
n
40
42
A
n
41
43
A
MET
44
n
42
MET
44
A
TYR
45
n
43
TYR
45
A
SER
46
n
44
SER
46
A
TYR
47
n
45
TYR
47
A
VAL
48
n
46
VAL
48
A
PHE
49
n
47
PHE
49
A
ARG
50
n
48
ARG
50
A
VAL
51
n
49
VAL
51
A
CYS
52
n
50
CYS
52
A
ARG
53
n
51
ARG
53
A
GLU
54
n
52
GLU
54
A
ALA
55
n
53
ALA
55
A
GLY
56
n
54
GLY
56
A
GLN
57
n
55
GLN
57
A
HIS
58
n
56
HIS
58
A
SER
59
n
57
SER
59
A
SER
60
n
58
SER
60
A
GLY
61
n
59
GLY
61
A
ALA
62
n
60
ALA
62
A
GLY
63
n
61
GLY
63
A
LEU
64
n
62
LEU
64
A
VAL
65
n
63
VAL
65
A
GLN
66
n
64
GLN
66
A
ILE
67
n
65
ILE
67
A
GLN
68
n
66
GLN
68
A
LYS
69
n
67
LYS
69
A
SER
70
n
68
SER
70
A
ASN
71
n
69
ASN
71
A
GLY
72
n
70
GLY
72
A
LYS
73
n
71
LYS
73
A
GLU
74
n
72
GLU
74
A
THR
75
n
73
THR
75
A
VAL
76
n
74
VAL
76
A
VAL
77
n
75
VAL
77
A
GLY
78
n
76
GLY
78
A
ARG
79
n
77
ARG
79
A
PHE
80
n
78
PHE
80
A
ASN
81
n
79
ASN
81
A
GLU
82
n
80
GLU
82
A
THR
83
n
81
THR
83
A
GLN
84
n
82
GLN
84
A
ILE
85
n
83
ILE
85
A
PHE
86
n
84
PHE
86
A
GLN
87
n
85
GLN
87
A
GLY
88
n
86
GLY
88
A
SER
89
n
87
SER
89
A
ASN
90
n
88
ASN
90
A
TRP
91
n
89
TRP
91
A
ILE
92
n
90
ILE
92
A
MET
93
n
91
MET
93
A
LEU
94
n
92
LEU
94
A
ILE
95
n
93
ILE
95
A
TYR
96
n
94
TYR
96
A
LYS
97
n
95
LYS
97
A
GLY
98
n
96
GLY
98
A
GLY
99
n
97
GLY
99
A
ASP
100
n
98
ASP
100
A
GLU
101
n
99
GLU
101
A
TYR
102
n
100
TYR
102
A
ASP
103
n
101
ASP
103
A
ASN
104
n
102
ASN
104
A
HIS
105
n
103
HIS
105
A
CYS
106
n
104
CYS
106
A
GLY
107
n
105
GLY
107
A
ARG
108
n
106
ARG
108
A
GLU
109
n
107
GLU
109
A
GLN
110
n
108
GLN
110
A
ARG
111
n
109
ARG
111
A
ARG
112
n
110
ARG
112
A
ALA
113
n
111
ALA
113
A
VAL
114
n
112
VAL
114
A
VAL
115
n
113
VAL
115
A
MET
116
n
114
MET
116
A
ILE
117
n
115
ILE
117
A
SER
118
n
116
SER
118
A
CYS
119
n
117
CYS
119
A
ASN
120
n
118
ASN
120
A
ARG
121
n
119
ARG
121
A
HIS
122
n
120
HIS
122
A
THR
123
n
121
THR
123
A
LEU
124
n
122
LEU
124
A
ALA
125
n
123
ALA
125
A
ASP
126
n
124
ASP
126
A
ASN
127
n
125
ASN
127
A
PHE
128
n
126
PHE
128
A
ASN
129
n
127
ASN
129
A
PRO
130
n
128
PRO
130
A
VAL
131
n
129
VAL
131
A
SER
132
n
130
SER
132
A
GLU
133
n
131
GLU
133
A
GLU
134
n
132
GLU
134
A
ARG
135
n
133
ARG
135
A
GLY
136
n
134
GLY
136
A
LYS
137
n
135
LYS
137
A
VAL
138
n
136
VAL
138
A
GLN
139
n
137
GLN
139
A
ASP
140
n
138
ASP
140
A
CYS
141
n
139
CYS
141
A
PHE
142
n
140
PHE
142
A
TYR
143
n
141
TYR
143
A
LEU
144
n
142
LEU
144
A
PHE
145
n
143
PHE
145
A
GLU
146
n
144
GLU
146
A
MET
147
n
145
MET
147
A
ASP
148
n
146
ASP
148
A
SER
149
n
147
SER
149
A
SER
150
n
148
SER
150
A
LEU
151
n
149
LEU
151
A
ALA
152
n
150
ALA
152
A
CYS
153
n
151
CYS
153
A
SER
154
n
152
SER
154
A
GLU
3
n
1
GLU
3
B
LYS
4
n
2
LYS
4
B
THR
5
n
3
THR
5
B
CYS
6
n
4
CYS
6
B
ASP
7
n
5
ASP
7
B
LEU
8
n
6
LEU
8
B
VAL
9
n
7
VAL
9
B
GLY
10
n
8
GLY
10
B
GLU
11
n
9
GLU
11
B
LYS
12
n
10
LYS
12
B
GLY
13
n
11
GLY
13
B
LYS
14
n
12
LYS
14
B
GLU
15
n
13
GLU
15
B
SER
16
n
14
SER
16
B
GLU
17
n
15
GLU
17
B
LYS
18
n
16
LYS
18
B
GLU
19
n
17
GLU
19
B
LEU
20
n
18
LEU
20
B
ALA
21
n
19
ALA
21
B
LEU
22
n
20
LEU
22
B
LEU
23
n
21
LEU
23
B
LYS
24
n
22
LYS
24
B
ARG
25
n
23
ARG
25
B
LEU
26
n
24
LEU
26
B
THR
27
n
25
THR
27
B
PRO
28
n
26
PRO
28
B
LEU
29
n
27
LEU
29
B
PHE
30
n
28
PHE
30
B
GLN
31
n
29
GLN
31
B
LYS
32
n
30
LYS
32
B
SER
33
n
31
SER
33
B
PHE
34
n
32
PHE
34
B
GLU
35
n
33
GLU
35
B
SER
36
n
34
SER
36
B
THR
37
n
35
THR
37
B
n
36
38
B
n
37
39
B
n
38
40
B
n
39
41
B
n
40
42
B
n
41
43
B
MET
44
n
42
MET
44
B
TYR
45
n
43
TYR
45
B
SER
46
n
44
SER
46
B
TYR
47
n
45
TYR
47
B
VAL
48
n
46
VAL
48
B
PHE
49
n
47
PHE
49
B
ARG
50
n
48
ARG
50
B
VAL
51
n
49
VAL
51
B
CYS
52
n
50
CYS
52
B
ARG
53
n
51
ARG
53
B
GLU
54
n
52
GLU
54
B
ALA
55
n
53
ALA
55
B
GLY
56
n
54
GLY
56
B
GLN
57
n
55
GLN
57
B
HIS
58
n
56
HIS
58
B
SER
59
n
57
SER
59
B
SER
60
n
58
SER
60
B
GLY
61
n
59
GLY
61
B
ALA
62
n
60
ALA
62
B
GLY
63
n
61
GLY
63
B
LEU
64
n
62
LEU
64
B
VAL
65
n
63
VAL
65
B
GLN
66
n
64
GLN
66
B
ILE
67
n
65
ILE
67
B
GLN
68
n
66
GLN
68
B
LYS
69
n
67
LYS
69
B
SER
70
n
68
SER
70
B
ASN
71
n
69
ASN
71
B
GLY
72
n
70
GLY
72
B
LYS
73
n
71
LYS
73
B
GLU
74
n
72
GLU
74
B
THR
75
n
73
THR
75
B
VAL
76
n
74
VAL
76
B
VAL
77
n
75
VAL
77
B
GLY
78
n
76
GLY
78
B
ARG
79
n
77
ARG
79
B
PHE
80
n
78
PHE
80
B
ASN
81
n
79
ASN
81
B
GLU
82
n
80
GLU
82
B
THR
83
n
81
THR
83
B
GLN
84
n
82
GLN
84
B
ILE
85
n
83
ILE
85
B
PHE
86
n
84
PHE
86
B
GLN
87
n
85
GLN
87
B
GLY
88
n
86
GLY
88
B
SER
89
n
87
SER
89
B
ASN
90
n
88
ASN
90
B
TRP
91
n
89
TRP
91
B
ILE
92
n
90
ILE
92
B
MET
93
n
91
MET
93
B
LEU
94
n
92
LEU
94
B
ILE
95
n
93
ILE
95
B
TYR
96
n
94
TYR
96
B
LYS
97
n
95
LYS
97
B
GLY
98
n
96
GLY
98
B
GLY
99
n
97
GLY
99
B
ASP
100
n
98
ASP
100
B
GLU
101
n
99
GLU
101
B
TYR
102
n
100
TYR
102
B
ASP
103
n
101
ASP
103
B
ASN
104
n
102
ASN
104
B
HIS
105
n
103
HIS
105
B
CYS
106
n
104
CYS
106
B
GLY
107
n
105
GLY
107
B
ARG
108
n
106
ARG
108
B
GLU
109
n
107
GLU
109
B
GLN
110
n
108
GLN
110
B
ARG
111
n
109
ARG
111
B
ARG
112
n
110
ARG
112
B
ALA
113
n
111
ALA
113
B
VAL
114
n
112
VAL
114
B
VAL
115
n
113
VAL
115
B
MET
116
n
114
MET
116
B
ILE
117
n
115
ILE
117
B
SER
118
n
116
SER
118
B
CYS
119
n
117
CYS
119
B
ASN
120
n
118
ASN
120
B
ARG
121
n
119
ARG
121
B
HIS
122
n
120
HIS
122
B
THR
123
n
121
THR
123
B
LEU
124
n
122
LEU
124
B
ALA
125
n
123
ALA
125
B
ASP
126
n
124
ASP
126
B
ASN
127
n
125
ASN
127
B
PHE
128
n
126
PHE
128
B
ASN
129
n
127
ASN
129
B
PRO
130
n
128
PRO
130
B
VAL
131
n
129
VAL
131
B
SER
132
n
130
SER
132
B
GLU
133
n
131
GLU
133
B
GLU
134
n
132
GLU
134
B
ARG
135
n
133
ARG
135
B
GLY
136
n
134
GLY
136
B
LYS
137
n
135
LYS
137
B
VAL
138
n
136
VAL
138
B
GLN
139
n
137
GLN
139
B
ASP
140
n
138
ASP
140
B
CYS
141
n
139
CYS
141
B
PHE
142
n
140
PHE
142
B
TYR
143
n
141
TYR
143
B
LEU
144
n
142
LEU
144
B
PHE
145
n
143
PHE
145
B
GLU
146
n
144
GLU
146
B
MET
147
n
145
MET
147
B
ASP
148
n
146
ASP
148
B
SER
149
n
147
SER
149
B
SER
150
n
148
SER
150
B
LEU
151
n
149
LEU
151
B
ALA
152
n
150
ALA
152
B
CYS
153
n
151
CYS
153
B
SER
154
n
152
SER
154
B
author_and_software_defined_assembly
PISA
2
dimeric
3380
-27
14210
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
46
A
O
SER
44
A
N
ILE
67
A
N
ILE
65
A
O
GLN
66
A
O
GLN
64
A
N
THR
75
A
N
THR
73
A
O
GLN
84
A
O
GLN
82
A
N
ILE
95
A
N
ILE
93
A
O
ILE
92
A
O
ILE
90
A
N
ILE
117
A
N
ILE
115
A
O
VAL
114
A
O
VAL
112
A
N
TYR
143
A
N
TYR
141
A
O
PHE
142
A
O
PHE
140
A
N
GLU
134
A
N
GLU
132
B
O
PHE
34
B
O
PHE
32
B
N
PHE
49
B
N
PHE
47
B
O
SER
46
B
O
SER
44
B
N
ILE
67
B
N
ILE
65
B
O
GLN
66
B
O
GLN
64
B
N
THR
75
B
N
THR
73
B
O
ASN
129
B
O
ASN
127
B
N
GLU
146
B
N
GLU
144
B
O
TYR
143
B
O
TYR
141
B
N
VAL
114
B
N
VAL
112
B
O
ALA
113
B
O
ALA
111
B
N
TYR
96
B
N
TYR
94
B
O
MET
93
B
O
MET
91
B
N
PHE
86
B
N
PHE
84
1
A
VAL
38
A
VAL
36
1
Y
1
A
GLY
39
A
GLY
37
1
Y
1
A
GLN
40
A
GLN
38
1
Y
1
A
SER
41
A
SER
39
1
Y
1
A
PRO
42
A
PRO
40
1
Y
1
A
ASP
43
A
ASP
41
1
Y
1
B
VAL
38
B
VAL
36
1
Y
1
B
GLY
39
B
GLY
37
1
Y
1
B
GLN
40
B
GLN
38
1
Y
1
B
SER
41
B
SER
39
1
Y
1
B
PRO
42
B
PRO
40
1
Y
1
B
ASP
43
B
ASP
41
1
Y
1
A
THR
5
-149.34
-157.90
1
A
ASN
90
-152.53
34.24
1
A
ASN
104
-147.35
-34.26
1
A
ALA
125
-173.95
131.64
1
B
ASN
104
-126.00
-50.84
1
B
ALA
125
-170.92
130.99
PARAM19X.PRO
TOPH19X.PRO
PARAM19.SOL
TOPH19.SOL
PARAMETER.ELEMENTS
TOPOLOGY.ELEMENTS
MAN.PAR
TOP.PAR
19.65
0
0
0
0
0
0
0.276
0.0049
0.224
0.224
1.8
10.0
3138
30956
10.0
88.5
RANDOM
10000000.00
0.001
1
0
THROUGHOUT
2.0
MULTIPLE ISOMORPHOUS REPLACEMENT
0
0
0
0
0
1.8
10.0
145
2563
34
0
2384
0.007
1.6
26.1
1.18
0
0
0
0
1
0
1
X-RAY DIFFRACTION
0
0
2
2
X-RAY DIFFRACTION
0
0
3
3
X-RAY DIFFRACTION
0
0
4
4
X-RAY DIFFRACTION
0
0
0.3468
0.022
0.3148
1.88
234
2272
8
10.0
77.3
20.12
1.80
15.0
1M6P
144591
0
0.054
0.077
1
10.7
4.6
89.0
0.34
1.80
1.82
2
0.43
2
72.5
data reduction
DENZO
data scaling
SCALEPACK
phasing
PHASES
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
EXTRACYTOPLASMIC DOMAIN OF BOVINE CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLU
17
A
GLU
15
HELX_P
A
ARG
25
A
ARG
23
1
1
9
A
THR
27
A
THR
25
HELX_P
A
LEU
29
A
LEU
27
5
2
3
A
CYS
106
A
CYS
104
HELX_P
A
ARG
108
A
ARG
106
5
3
3
A
SER
150
A
SER
148
HELX_P
A
ALA
152
A
ALA
150
5
4
3
B
GLU
17
B
GLU
15
HELX_P
B
PHE
30
B
PHE
28
1
5
14
B
CYS
106
B
CYS
104
HELX_P
B
ARG
108
B
ARG
106
5
6
3
B
SER
150
B
SER
148
HELX_P
B
ALA
152
B
ALA
150
5
7
3
disulf
2.020
A
CYS
6
A
SG
CYS
4
1_555
A
CYS
52
A
SG
CYS
50
1_555
disulf
2.018
A
CYS
106
A
SG
CYS
104
1_555
A
CYS
141
A
SG
CYS
139
1_555
disulf
2.028
A
CYS
119
A
SG
CYS
117
1_555
A
CYS
153
A
SG
CYS
151
1_555
disulf
2.035
B
CYS
6
B
SG
CYS
4
1_555
B
CYS
52
B
SG
CYS
50
1_555
disulf
2.024
B
CYS
106
B
SG
CYS
104
1_555
B
CYS
141
B
SG
CYS
139
1_555
disulf
2.020
B
CYS
119
B
SG
CYS
117
1_555
B
CYS
153
B
SG
CYS
151
1_555
metalc
2.453
A
MN
199
C
MN
MN
1_555
A
M6P
200
D
O3P
M6P
1_555
metalc
2.722
B
MN
199
E
MN
MN
1_555
B
M6P
200
F
O3P
M6P
1_555
RECEPTOR
RECEPTOR, CATION DEPENDENT MANNOSE 6-PHOSPHATE, P-TYPE LECTIN, TRANSPORT
MPRD_BOVIN
UNP
1
1
P11456
MMSPLHSSWRTGLLLLLLFSVAVRESWQTEEKTCDLVGEKGKESEKELALLKRLTPLFNKSFESTVGQSPDMYSYVFRVC
REAGNHSSGAGLVQINKSNGKETVVGRFNETQIFNGSNWIMLIYKGGDEYDNHCGREQRRAVVMISCNRHTLADNFNPVS
EERGKVQDCFYLFEMDSSLACSPEISHLSVGSILLVTLASLVAVYIIGGFLYQRLVVGAKGMEQFPHLAFWQDLGNLVAD
GCDFVCRSKPRNVPAAYRGVGDDQLGEESEERDDHLLPM
31
182
1M6P
3
154
P11456
A
1
1
152
31
182
1M6P
3
154
P11456
B
1
1
152
1
ASN
engineered mutation
GLN
31
1M6P
A
P11456
UNP
59
29
1
ASN
engineered mutation
GLN
57
1M6P
A
P11456
UNP
85
55
1
ASN
engineered mutation
GLN
68
1M6P
A
P11456
UNP
96
66
1
ASN
engineered mutation
GLN
87
1M6P
A
P11456
UNP
115
85
2
ASN
engineered mutation
GLN
31
1M6P
B
P11456
UNP
59
29
2
ASN
engineered mutation
GLN
57
1M6P
B
P11456
UNP
85
55
2
ASN
engineered mutation
GLN
68
1M6P
B
P11456
UNP
96
66
2
ASN
engineered mutation
GLN
87
1M6P
B
P11456
UNP
115
85
3
5
4
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
TYR
45
A
TYR
43
A
PHE
49
A
PHE
47
A
LEU
64
A
LEU
62
A
GLN
68
A
GLN
66
A
LYS
73
A
LYS
71
A
VAL
76
A
VAL
74
A
THR
83
A
THR
81
A
GLN
87
A
GLN
85
A
TRP
91
A
TRP
89
A
TYR
96
A
TYR
94
A
ALA
113
A
ALA
111
A
CYS
119
A
CYS
117
A
PHE
142
A
PHE
140
A
SER
149
A
SER
147
A
ASN
129
A
ASN
127
A
GLU
134
A
GLU
132
B
PHE
34
B
PHE
32
B
THR
37
B
THR
35
B
TYR
45
B
TYR
43
B
PHE
49
B
PHE
47
B
LEU
64
B
LEU
62
B
GLN
68
B
GLN
66
B
LYS
73
B
LYS
71
B
VAL
76
B
VAL
74
B
ASN
129
B
ASN
127
B
GLU
134
B
GLU
132
B
PHE
142
B
PHE
140
B
SER
149
B
SER
147
B
ALA
113
B
ALA
111
B
CYS
119
B
CYS
117
B
TRP
91
B
TRP
89
B
LYS
97
B
LYS
95
B
ARG
79
B
ARG
77
B
GLN
87
B
GLN
85
96
P 43 21 2