0.008033
0.004638
0.000000
0.000000
0.009276
0.000000
0.000000
0.000000
0.008942
0.00000
0.00000
0.00000
Saridakis, V.
Pai, E.F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
124.480
124.480
111.826
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
S
P
N
248
N
O
N
249
N
O
N
250
N
O
N
251
N
C
N
252
R
C
N
253
N
O
N
254
S
C
N
255
N
O
N
256
R
C
N
257
N
O
N
258
R
C
Y
259
N
N
Y
260
N
C
Y
261
N
N
Y
262
N
C
Y
263
N
C
N
264
N
N
Y
265
N
N
Y
266
N
C
Y
267
N
N
Y
268
N
C
N
269
N
O
N
270
N
P
N
271
N
O
N
272
N
O
N
273
N
O
N
274
N
C
N
275
R
C
N
276
N
O
N
277
S
C
N
278
N
O
N
279
R
C
N
280
N
O
N
281
R
C
Y
282
N
N
Y
283
N
C
Y
284
N
C
N
285
N
C
N
286
N
O
N
287
N
N
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
O
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
S
N
373
N
O
N
374
N
O
N
375
N
O
N
376
N
O
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
R
C
N
382
N
O
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
N
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
N
432
N
O
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
N
N
446
S
C
N
447
N
C
N
448
N
O
N
449
N
C
N
450
N
C
N
451
N
C
N
452
N
O
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
Y
258
N
sing
Y
259
N
sing
Y
260
N
doub
N
261
N
sing
Y
262
N
sing
Y
263
N
sing
Y
264
N
doub
N
265
N
sing
Y
266
N
doub
N
267
N
sing
N
268
N
sing
Y
269
N
sing
Y
270
N
doub
N
271
N
sing
Y
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
Y
295
N
sing
Y
296
N
doub
Y
297
N
doub
N
298
N
sing
N
299
N
sing
Y
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
Y
394
N
doub
Y
395
N
sing
Y
396
N
sing
N
397
N
sing
Y
398
N
doub
Y
399
N
sing
Y
400
N
sing
N
401
N
sing
Y
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
doub
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
Y
422
N
doub
Y
423
N
sing
Y
424
N
sing
N
425
N
sing
Y
426
N
doub
N
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
34356
34363
10.1074/jbc.M205369200
12810729
Mutational, Structural, and Kinetic Studies of the ATP-binding Site of Methanobacterium thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase
2003
10.2210/pdb1m8k/pdb
pdb_00001m8k
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2001-09-18
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU RU300
20497.660
Nicotinamide-nucleotide Adenylyltransferase
2.7.7.1
H19A
3
man
polymer
96.063
SULFATE ION
3
syn
non-polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
3
syn
non-polymer
NAD(+) pyrophosphorylase, NAD(+) diphosphorylase, NMN adenylyltransferase
no
no
VMTMRGLLVGRMQPFHRGALQVIKSILEEVDELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQD
IECNALWVGHIKMLTPPFDRVYSGNPLVQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDGDWRSLLPESVVEVIDEI
NGVERIKHLAKKEVSELGGIS
VMTMRGLLVGRMQPFHRGALQVIKSILEEVDELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQD
IECNALWVGHIKMLTPPFDRVYSGNPLVQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDGDWRSLLPESVVEVIDEI
NGVERIKHLAKKEVSELGGIS
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Methanothermobacter
Escherichia
Escherichia coli
sample
mth150
145262
Methanothermobacter thermautotrophicus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET15B
1
4.07
69.74
VAPOR DIFFUSION, HANGING DROP
8
1.5 M Ammonium Sulfate, 100 mM Tris, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
database_2
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2003-07-15
1
1
2008-04-28
1
2
2011-07-13
1
3
2021-10-27
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE MUTANT R11A COMPLEXED WITH NAD
NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE MUTANT R11K COMPLEXED WITH NAD
NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE MUTANT R136A COMPLEXED WITH NAD
RCSB
Y
RCSB
2002-07-25
REL
SO4
SULFATE ION
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
1EJ2
pdb entry 1ej2
PDB
experimental model
SO4
1759
2
SO4
SO4
1759
A
NAD
2006
3
NAD
NAD
2006
A
SO4
1761
2
SO4
SO4
1761
B
NAD
2005
3
NAD
NAD
2005
B
SO4
1760
2
SO4
SO4
1760
C
NAD
2004
3
NAD
NAD
2004
C
n
1
1
A
n
2
2
A
THR
3
n
3
THR
3
A
MET
4
n
4
MET
4
A
ARG
5
n
5
ARG
5
A
GLY
6
n
6
GLY
6
A
LEU
7
n
7
LEU
7
A
LEU
8
n
8
LEU
8
A
VAL
9
n
9
VAL
9
A
GLY
10
n
10
GLY
10
A
ARG
11
n
11
ARG
11
A
MET
12
n
12
MET
12
A
GLN
13
n
13
GLN
13
A
PRO
14
n
14
PRO
14
A
PHE
15
n
15
PHE
15
A
HIS
16
n
16
HIS
16
A
ARG
17
n
17
ARG
17
A
GLY
18
n
18
GLY
18
A
ALA
19
n
19
ALA
19
A
LEU
20
n
20
LEU
20
A
GLN
21
n
21
GLN
21
A
VAL
22
n
22
VAL
22
A
ILE
23
n
23
ILE
23
A
LYS
24
n
24
LYS
24
A
SER
25
n
25
SER
25
A
ILE
26
n
26
ILE
26
A
LEU
27
n
27
LEU
27
A
GLU
28
n
28
GLU
28
A
GLU
29
n
29
GLU
29
A
VAL
30
n
30
VAL
30
A
ASP
31
n
31
ASP
31
A
GLU
32
n
32
GLU
32
A
LEU
33
n
33
LEU
33
A
ILE
34
n
34
ILE
34
A
ILE
35
n
35
ILE
35
A
CYS
36
n
36
CYS
36
A
ILE
37
n
37
ILE
37
A
GLY
38
n
38
GLY
38
A
SER
39
n
39
SER
39
A
ALA
40
n
40
ALA
40
A
GLN
41
n
41
GLN
41
A
LEU
42
n
42
LEU
42
A
SER
43
n
43
SER
43
A
HIS
44
n
44
HIS
44
A
SER
45
n
45
SER
45
A
ILE
46
n
46
ILE
46
A
ARG
47
n
47
ARG
47
A
ASP
48
n
48
ASP
48
A
PRO
49
n
49
PRO
49
A
PHE
50
n
50
PHE
50
A
THR
51
n
51
THR
51
A
ALA
52
n
52
ALA
52
A
GLY
53
n
53
GLY
53
A
GLU
54
n
54
GLU
54
A
ARG
55
n
55
ARG
55
A
VAL
56
n
56
VAL
56
A
MET
57
n
57
MET
57
A
MET
58
n
58
MET
58
A
LEU
59
n
59
LEU
59
A
THR
60
n
60
THR
60
A
LYS
61
n
61
LYS
61
A
ALA
62
n
62
ALA
62
A
LEU
63
n
63
LEU
63
A
SER
64
n
64
SER
64
A
GLU
65
n
65
GLU
65
A
ASN
66
n
66
ASN
66
A
GLY
67
n
67
GLY
67
A
ILE
68
n
68
ILE
68
A
PRO
69
n
69
PRO
69
A
ALA
70
n
70
ALA
70
A
SER
71
n
71
SER
71
A
ARG
72
n
72
ARG
72
A
TYR
73
n
73
TYR
73
A
TYR
74
n
74
TYR
74
A
ILE
75
n
75
ILE
75
A
ILE
76
n
76
ILE
76
A
PRO
77
n
77
PRO
77
A
VAL
78
n
78
VAL
78
A
GLN
79
n
79
GLN
79
A
ASP
80
n
80
ASP
80
A
ILE
81
n
81
ILE
81
A
GLU
82
n
82
GLU
82
A
CYS
83
n
83
CYS
83
A
ASN
84
n
84
ASN
84
A
ALA
85
n
85
ALA
85
A
LEU
86
n
86
LEU
86
A
TRP
87
n
87
TRP
87
A
VAL
88
n
88
VAL
88
A
GLY
89
n
89
GLY
89
A
HIS
90
n
90
HIS
90
A
ILE
91
n
91
ILE
91
A
LYS
92
n
92
LYS
92
A
MET
93
n
93
MET
93
A
LEU
94
n
94
LEU
94
A
THR
95
n
95
THR
95
A
PRO
96
n
96
PRO
96
A
PRO
97
n
97
PRO
97
A
PHE
98
n
98
PHE
98
A
ASP
99
n
99
ASP
99
A
ARG
100
n
100
ARG
100
A
VAL
101
n
101
VAL
101
A
TYR
102
n
102
TYR
102
A
SER
103
n
103
SER
103
A
GLY
104
n
104
GLY
104
A
ASN
105
n
105
ASN
105
A
PRO
106
n
106
PRO
106
A
LEU
107
n
107
LEU
107
A
VAL
108
n
108
VAL
108
A
GLN
109
n
109
GLN
109
A
ARG
110
n
110
ARG
110
A
LEU
111
n
111
LEU
111
A
PHE
112
n
112
PHE
112
A
SER
113
n
113
SER
113
A
GLU
114
n
114
GLU
114
A
ASP
115
n
115
ASP
115
A
GLY
116
n
116
GLY
116
A
TYR
117
n
117
TYR
117
A
GLU
118
n
118
GLU
118
A
VAL
119
n
119
VAL
119
A
THR
120
n
120
THR
120
A
ALA
121
n
121
ALA
121
A
PRO
122
n
122
PRO
122
A
PRO
123
n
123
PRO
123
A
LEU
124
n
124
LEU
124
A
PHE
125
n
125
PHE
125
A
TYR
126
n
126
TYR
126
A
ARG
127
n
127
ARG
127
A
ASP
128
n
128
ASP
128
A
ARG
129
n
129
ARG
129
A
TYR
130
n
130
TYR
130
A
SER
131
n
131
SER
131
A
GLY
132
n
132
GLY
132
A
THR
133
n
133
THR
133
A
GLU
134
n
134
GLU
134
A
VAL
135
n
135
VAL
135
A
ARG
136
n
136
ARG
136
A
ARG
137
n
137
ARG
137
A
ARG
138
n
138
ARG
138
A
MET
139
n
139
MET
139
A
LEU
140
n
140
LEU
140
A
ASP
141
n
141
ASP
141
A
ASP
142
n
142
ASP
142
A
GLY
143
n
143
GLY
143
A
ASP
144
n
144
ASP
144
A
TRP
145
n
145
TRP
145
A
ARG
146
n
146
ARG
146
A
SER
147
n
147
SER
147
A
LEU
148
n
148
LEU
148
A
LEU
149
n
149
LEU
149
A
PRO
150
n
150
PRO
150
A
GLU
151
n
151
GLU
151
A
SER
152
n
152
SER
152
A
VAL
153
n
153
VAL
153
A
VAL
154
n
154
VAL
154
A
GLU
155
n
155
GLU
155
A
VAL
156
n
156
VAL
156
A
ILE
157
n
157
ILE
157
A
ASP
158
n
158
ASP
158
A
GLU
159
n
159
GLU
159
A
ILE
160
n
160
ILE
160
A
ASN
161
n
161
ASN
161
A
GLY
162
n
162
GLY
162
A
VAL
163
n
163
VAL
163
A
GLU
164
n
164
GLU
164
A
ARG
165
n
165
ARG
165
A
ILE
166
n
166
ILE
166
A
LYS
167
n
167
LYS
167
A
HIS
168
n
168
HIS
168
A
LEU
169
n
169
LEU
169
A
ALA
170
n
170
ALA
170
A
LYS
171
n
171
LYS
171
A
n
172
172
A
n
173
173
A
n
174
174
A
n
175
175
A
n
176
176
A
n
177
177
A
n
178
178
A
n
179
179
A
n
180
180
A
n
181
181
A
n
1
1
B
n
2
2
B
THR
3
n
3
THR
3
B
MET
4
n
4
MET
4
B
ARG
5
n
5
ARG
5
B
GLY
6
n
6
GLY
6
B
LEU
7
n
7
LEU
7
B
LEU
8
n
8
LEU
8
B
VAL
9
n
9
VAL
9
B
GLY
10
n
10
GLY
10
B
ARG
11
n
11
ARG
11
B
MET
12
n
12
MET
12
B
GLN
13
n
13
GLN
13
B
PRO
14
n
14
PRO
14
B
PHE
15
n
15
PHE
15
B
HIS
16
n
16
HIS
16
B
ARG
17
n
17
ARG
17
B
GLY
18
n
18
GLY
18
B
ALA
19
n
19
ALA
19
B
LEU
20
n
20
LEU
20
B
GLN
21
n
21
GLN
21
B
VAL
22
n
22
VAL
22
B
ILE
23
n
23
ILE
23
B
LYS
24
n
24
LYS
24
B
SER
25
n
25
SER
25
B
ILE
26
n
26
ILE
26
B
LEU
27
n
27
LEU
27
B
GLU
28
n
28
GLU
28
B
GLU
29
n
29
GLU
29
B
VAL
30
n
30
VAL
30
B
ASP
31
n
31
ASP
31
B
GLU
32
n
32
GLU
32
B
LEU
33
n
33
LEU
33
B
ILE
34
n
34
ILE
34
B
ILE
35
n
35
ILE
35
B
CYS
36
n
36
CYS
36
B
ILE
37
n
37
ILE
37
B
GLY
38
n
38
GLY
38
B
SER
39
n
39
SER
39
B
ALA
40
n
40
ALA
40
B
GLN
41
n
41
GLN
41
B
LEU
42
n
42
LEU
42
B
SER
43
n
43
SER
43
B
HIS
44
n
44
HIS
44
B
SER
45
n
45
SER
45
B
ILE
46
n
46
ILE
46
B
ARG
47
n
47
ARG
47
B
ASP
48
n
48
ASP
48
B
PRO
49
n
49
PRO
49
B
PHE
50
n
50
PHE
50
B
THR
51
n
51
THR
51
B
ALA
52
n
52
ALA
52
B
GLY
53
n
53
GLY
53
B
GLU
54
n
54
GLU
54
B
ARG
55
n
55
ARG
55
B
VAL
56
n
56
VAL
56
B
MET
57
n
57
MET
57
B
MET
58
n
58
MET
58
B
LEU
59
n
59
LEU
59
B
THR
60
n
60
THR
60
B
LYS
61
n
61
LYS
61
B
ALA
62
n
62
ALA
62
B
LEU
63
n
63
LEU
63
B
SER
64
n
64
SER
64
B
GLU
65
n
65
GLU
65
B
ASN
66
n
66
ASN
66
B
GLY
67
n
67
GLY
67
B
ILE
68
n
68
ILE
68
B
PRO
69
n
69
PRO
69
B
ALA
70
n
70
ALA
70
B
SER
71
n
71
SER
71
B
ARG
72
n
72
ARG
72
B
TYR
73
n
73
TYR
73
B
TYR
74
n
74
TYR
74
B
ILE
75
n
75
ILE
75
B
ILE
76
n
76
ILE
76
B
PRO
77
n
77
PRO
77
B
VAL
78
n
78
VAL
78
B
GLN
79
n
79
GLN
79
B
ASP
80
n
80
ASP
80
B
ILE
81
n
81
ILE
81
B
GLU
82
n
82
GLU
82
B
CYS
83
n
83
CYS
83
B
ASN
84
n
84
ASN
84
B
ALA
85
n
85
ALA
85
B
LEU
86
n
86
LEU
86
B
TRP
87
n
87
TRP
87
B
VAL
88
n
88
VAL
88
B
GLY
89
n
89
GLY
89
B
HIS
90
n
90
HIS
90
B
ILE
91
n
91
ILE
91
B
LYS
92
n
92
LYS
92
B
MET
93
n
93
MET
93
B
LEU
94
n
94
LEU
94
B
THR
95
n
95
THR
95
B
PRO
96
n
96
PRO
96
B
PRO
97
n
97
PRO
97
B
PHE
98
n
98
PHE
98
B
ASP
99
n
99
ASP
99
B
ARG
100
n
100
ARG
100
B
VAL
101
n
101
VAL
101
B
TYR
102
n
102
TYR
102
B
SER
103
n
103
SER
103
B
GLY
104
n
104
GLY
104
B
ASN
105
n
105
ASN
105
B
PRO
106
n
106
PRO
106
B
LEU
107
n
107
LEU
107
B
VAL
108
n
108
VAL
108
B
GLN
109
n
109
GLN
109
B
ARG
110
n
110
ARG
110
B
LEU
111
n
111
LEU
111
B
PHE
112
n
112
PHE
112
B
SER
113
n
113
SER
113
B
GLU
114
n
114
GLU
114
B
ASP
115
n
115
ASP
115
B
GLY
116
n
116
GLY
116
B
TYR
117
n
117
TYR
117
B
GLU
118
n
118
GLU
118
B
VAL
119
n
119
VAL
119
B
THR
120
n
120
THR
120
B
ALA
121
n
121
ALA
121
B
PRO
122
n
122
PRO
122
B
PRO
123
n
123
PRO
123
B
LEU
124
n
124
LEU
124
B
PHE
125
n
125
PHE
125
B
TYR
126
n
126
TYR
126
B
ARG
127
n
127
ARG
127
B
ASP
128
n
128
ASP
128
B
ARG
129
n
129
ARG
129
B
TYR
130
n
130
TYR
130
B
SER
131
n
131
SER
131
B
GLY
132
n
132
GLY
132
B
THR
133
n
133
THR
133
B
GLU
134
n
134
GLU
134
B
VAL
135
n
135
VAL
135
B
ARG
136
n
136
ARG
136
B
ARG
137
n
137
ARG
137
B
ARG
138
n
138
ARG
138
B
MET
139
n
139
MET
139
B
LEU
140
n
140
LEU
140
B
ASP
141
n
141
ASP
141
B
ASP
142
n
142
ASP
142
B
GLY
143
n
143
GLY
143
B
ASP
144
n
144
ASP
144
B
TRP
145
n
145
TRP
145
B
ARG
146
n
146
ARG
146
B
SER
147
n
147
SER
147
B
LEU
148
n
148
LEU
148
B
LEU
149
n
149
LEU
149
B
PRO
150
n
150
PRO
150
B
GLU
151
n
151
GLU
151
B
SER
152
n
152
SER
152
B
VAL
153
n
153
VAL
153
B
VAL
154
n
154
VAL
154
B
GLU
155
n
155
GLU
155
B
VAL
156
n
156
VAL
156
B
ILE
157
n
157
ILE
157
B
ASP
158
n
158
ASP
158
B
GLU
159
n
159
GLU
159
B
ILE
160
n
160
ILE
160
B
ASN
161
n
161
ASN
161
B
GLY
162
n
162
GLY
162
B
VAL
163
n
163
VAL
163
B
GLU
164
n
164
GLU
164
B
ARG
165
n
165
ARG
165
B
ILE
166
n
166
ILE
166
B
LYS
167
n
167
LYS
167
B
HIS
168
n
168
HIS
168
B
LEU
169
n
169
LEU
169
B
ALA
170
n
170
ALA
170
B
LYS
171
n
171
LYS
171
B
n
172
172
B
n
173
173
B
n
174
174
B
n
175
175
B
n
176
176
B
n
177
177
B
n
178
178
B
n
179
179
B
n
180
180
B
n
181
181
B
n
1
1
C
n
2
2
C
THR
3
n
3
THR
3
C
MET
4
n
4
MET
4
C
ARG
5
n
5
ARG
5
C
GLY
6
n
6
GLY
6
C
LEU
7
n
7
LEU
7
C
LEU
8
n
8
LEU
8
C
VAL
9
n
9
VAL
9
C
GLY
10
n
10
GLY
10
C
ARG
11
n
11
ARG
11
C
MET
12
n
12
MET
12
C
GLN
13
n
13
GLN
13
C
PRO
14
n
14
PRO
14
C
PHE
15
n
15
PHE
15
C
HIS
16
n
16
HIS
16
C
ARG
17
n
17
ARG
17
C
GLY
18
n
18
GLY
18
C
ALA
19
n
19
ALA
19
C
LEU
20
n
20
LEU
20
C
GLN
21
n
21
GLN
21
C
VAL
22
n
22
VAL
22
C
ILE
23
n
23
ILE
23
C
LYS
24
n
24
LYS
24
C
SER
25
n
25
SER
25
C
ILE
26
n
26
ILE
26
C
LEU
27
n
27
LEU
27
C
GLU
28
n
28
GLU
28
C
GLU
29
n
29
GLU
29
C
VAL
30
n
30
VAL
30
C
ASP
31
n
31
ASP
31
C
GLU
32
n
32
GLU
32
C
LEU
33
n
33
LEU
33
C
ILE
34
n
34
ILE
34
C
ILE
35
n
35
ILE
35
C
CYS
36
n
36
CYS
36
C
ILE
37
n
37
ILE
37
C
GLY
38
n
38
GLY
38
C
SER
39
n
39
SER
39
C
ALA
40
n
40
ALA
40
C
GLN
41
n
41
GLN
41
C
LEU
42
n
42
LEU
42
C
SER
43
n
43
SER
43
C
HIS
44
n
44
HIS
44
C
SER
45
n
45
SER
45
C
ILE
46
n
46
ILE
46
C
ARG
47
n
47
ARG
47
C
ASP
48
n
48
ASP
48
C
PRO
49
n
49
PRO
49
C
PHE
50
n
50
PHE
50
C
THR
51
n
51
THR
51
C
ALA
52
n
52
ALA
52
C
GLY
53
n
53
GLY
53
C
GLU
54
n
54
GLU
54
C
ARG
55
n
55
ARG
55
C
VAL
56
n
56
VAL
56
C
MET
57
n
57
MET
57
C
MET
58
n
58
MET
58
C
LEU
59
n
59
LEU
59
C
THR
60
n
60
THR
60
C
LYS
61
n
61
LYS
61
C
ALA
62
n
62
ALA
62
C
LEU
63
n
63
LEU
63
C
SER
64
n
64
SER
64
C
GLU
65
n
65
GLU
65
C
ASN
66
n
66
ASN
66
C
GLY
67
n
67
GLY
67
C
ILE
68
n
68
ILE
68
C
PRO
69
n
69
PRO
69
C
ALA
70
n
70
ALA
70
C
SER
71
n
71
SER
71
C
ARG
72
n
72
ARG
72
C
TYR
73
n
73
TYR
73
C
TYR
74
n
74
TYR
74
C
ILE
75
n
75
ILE
75
C
ILE
76
n
76
ILE
76
C
PRO
77
n
77
PRO
77
C
VAL
78
n
78
VAL
78
C
GLN
79
n
79
GLN
79
C
ASP
80
n
80
ASP
80
C
ILE
81
n
81
ILE
81
C
GLU
82
n
82
GLU
82
C
CYS
83
n
83
CYS
83
C
ASN
84
n
84
ASN
84
C
ALA
85
n
85
ALA
85
C
LEU
86
n
86
LEU
86
C
TRP
87
n
87
TRP
87
C
VAL
88
n
88
VAL
88
C
GLY
89
n
89
GLY
89
C
HIS
90
n
90
HIS
90
C
ILE
91
n
91
ILE
91
C
LYS
92
n
92
LYS
92
C
MET
93
n
93
MET
93
C
LEU
94
n
94
LEU
94
C
THR
95
n
95
THR
95
C
PRO
96
n
96
PRO
96
C
PRO
97
n
97
PRO
97
C
PHE
98
n
98
PHE
98
C
ASP
99
n
99
ASP
99
C
ARG
100
n
100
ARG
100
C
VAL
101
n
101
VAL
101
C
TYR
102
n
102
TYR
102
C
SER
103
n
103
SER
103
C
GLY
104
n
104
GLY
104
C
ASN
105
n
105
ASN
105
C
PRO
106
n
106
PRO
106
C
LEU
107
n
107
LEU
107
C
VAL
108
n
108
VAL
108
C
GLN
109
n
109
GLN
109
C
ARG
110
n
110
ARG
110
C
LEU
111
n
111
LEU
111
C
PHE
112
n
112
PHE
112
C
SER
113
n
113
SER
113
C
GLU
114
n
114
GLU
114
C
ASP
115
n
115
ASP
115
C
GLY
116
n
116
GLY
116
C
TYR
117
n
117
TYR
117
C
GLU
118
n
118
GLU
118
C
VAL
119
n
119
VAL
119
C
THR
120
n
120
THR
120
C
ALA
121
n
121
ALA
121
C
PRO
122
n
122
PRO
122
C
PRO
123
n
123
PRO
123
C
LEU
124
n
124
LEU
124
C
PHE
125
n
125
PHE
125
C
TYR
126
n
126
TYR
126
C
ARG
127
n
127
ARG
127
C
ASP
128
n
128
ASP
128
C
ARG
129
n
129
ARG
129
C
TYR
130
n
130
TYR
130
C
SER
131
n
131
SER
131
C
GLY
132
n
132
GLY
132
C
THR
133
n
133
THR
133
C
GLU
134
n
134
GLU
134
C
VAL
135
n
135
VAL
135
C
ARG
136
n
136
ARG
136
C
ARG
137
n
137
ARG
137
C
ARG
138
n
138
ARG
138
C
MET
139
n
139
MET
139
C
LEU
140
n
140
LEU
140
C
ASP
141
n
141
ASP
141
C
ASP
142
n
142
ASP
142
C
GLY
143
n
143
GLY
143
C
ASP
144
n
144
ASP
144
C
TRP
145
n
145
TRP
145
C
ARG
146
n
146
ARG
146
C
SER
147
n
147
SER
147
C
LEU
148
n
148
LEU
148
C
LEU
149
n
149
LEU
149
C
PRO
150
n
150
PRO
150
C
GLU
151
n
151
GLU
151
C
SER
152
n
152
SER
152
C
VAL
153
n
153
VAL
153
C
VAL
154
n
154
VAL
154
C
GLU
155
n
155
GLU
155
C
VAL
156
n
156
VAL
156
C
ILE
157
n
157
ILE
157
C
ASP
158
n
158
ASP
158
C
GLU
159
n
159
GLU
159
C
ILE
160
n
160
ILE
160
C
ASN
161
n
161
ASN
161
C
GLY
162
n
162
GLY
162
C
VAL
163
n
163
VAL
163
C
GLU
164
n
164
GLU
164
C
ARG
165
n
165
ARG
165
C
ILE
166
n
166
ILE
166
C
LYS
167
n
167
LYS
167
C
HIS
168
n
168
HIS
168
C
LEU
169
n
169
LEU
169
C
ALA
170
n
170
ALA
170
C
LYS
171
n
171
LYS
171
C
n
172
172
C
n
173
173
C
n
174
174
C
n
175
175
C
n
176
176
C
n
177
177
C
n
178
178
C
n
179
179
C
n
180
180
C
n
181
181
C
author_and_software_defined_assembly
PQS
6
hexameric
software_defined_assembly
PISA
3
trimeric
20710
-231
36450
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_554
y,x,-z-1
crystal symmetry operation
0.0000000000
0.0000000000
-111.8260000000
A
O
TYR
74
A
O
TYR
74
A
N
ILE
35
A
N
ILE
35
A
O
CYS
36
A
O
CYS
36
A
N
LEU
8
A
N
LEU
8
A
N
LEU
7
A
N
LEU
7
A
O
TYR
102
A
O
TYR
102
A
N
VAL
101
A
N
VAL
101
A
O
GLU
118
A
O
GLU
118
B
O
TYR
74
B
O
TYR
74
B
N
ILE
35
B
N
ILE
35
B
O
CYS
36
B
O
CYS
36
B
N
LEU
8
B
N
LEU
8
B
N
LEU
7
B
N
LEU
7
B
O
ARG
100
B
O
ARG
100
B
N
VAL
101
B
N
VAL
101
B
O
GLU
118
B
O
GLU
118
C
O
TYR
74
C
O
TYR
74
C
N
ILE
35
C
N
ILE
35
C
O
ILE
34
C
O
ILE
34
C
N
GLY
6
C
N
GLY
6
C
N
LEU
7
C
N
LEU
7
C
O
TYR
102
C
O
TYR
102
C
N
VAL
101
C
N
VAL
101
C
O
GLU
118
C
O
GLU
118
1
A
VAL
1
A
VAL
1
1
Y
1
A
MET
2
A
MET
2
1
Y
1
A
LYS
172
A
LYS
172
1
Y
1
A
GLU
173
A
GLU
173
1
Y
1
A
VAL
174
A
VAL
174
1
Y
1
A
SER
175
A
SER
175
1
Y
1
A
GLU
176
A
GLU
176
1
Y
1
A
LEU
177
A
LEU
177
1
Y
1
A
GLY
178
A
GLY
178
1
Y
1
A
GLY
179
A
GLY
179
1
Y
1
A
ILE
180
A
ILE
180
1
Y
1
A
SER
181
A
SER
181
1
Y
1
B
VAL
1
B
VAL
1
1
Y
1
B
MET
2
B
MET
2
1
Y
1
B
LYS
172
B
LYS
172
1
Y
1
B
GLU
173
B
GLU
173
1
Y
1
B
VAL
174
B
VAL
174
1
Y
1
B
SER
175
B
SER
175
1
Y
1
B
GLU
176
B
GLU
176
1
Y
1
B
LEU
177
B
LEU
177
1
Y
1
B
GLY
178
B
GLY
178
1
Y
1
B
GLY
179
B
GLY
179
1
Y
1
B
ILE
180
B
ILE
180
1
Y
1
B
SER
181
B
SER
181
1
Y
1
C
VAL
1
C
VAL
1
1
Y
1
C
MET
2
C
MET
2
1
Y
1
C
LYS
172
C
LYS
172
1
Y
1
C
GLU
173
C
GLU
173
1
Y
1
C
VAL
174
C
VAL
174
1
Y
1
C
SER
175
C
SER
175
1
Y
1
C
GLU
176
C
GLU
176
1
Y
1
C
LEU
177
C
LEU
177
1
Y
1
C
GLY
178
C
GLY
178
1
Y
1
C
GLY
179
C
GLY
179
1
Y
1
C
ILE
180
C
ILE
180
1
Y
1
C
SER
181
C
SER
181
1
Y
1
A
GLN
13
-113.71
75.82
1
A
SER
103
178.78
137.28
1
A
ASP
142
42.05
70.41
1
B
GLN
13
-113.07
77.55
1
B
PRO
14
-103.57
-168.26
1
B
SER
39
40.00
46.97
1
B
ALA
52
139.73
-46.87
1
B
PHE
125
-150.64
46.88
1
B
TYR
126
-19.13
132.69
1
B
ARG
127
-49.84
178.39
1
B
ASP
128
-74.18
-148.45
1
B
ARG
129
48.30
10.77
1
B
ASP
141
-93.20
34.98
1
B
ASP
142
46.81
25.50
1
B
ASP
144
-101.12
75.73
1
C
GLN
13
-100.67
76.77
1
C
SER
39
39.65
48.25
1
C
ASN
66
-92.68
30.12
1
C
PRO
69
-39.37
122.15
1
C
ARG
129
-39.45
-30.07
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
NAD.PARAM
NAD.TOP
CIS_PEPTIDE.PARAM
CIS_PEPTIDE.TOP
28.4
-4.61
10.61
0.00
-4.61
0.00
9.22
0.233
0.005
0.194
0.194
3.00
14.99
1822
18423
9.9
91.1
RANDOM
317851.62
317851.62
0
1
RESTRAINED
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
pdb entry 1ej2
FLAT MODEL
14.3492
0.342116
0.37
.3
5
0.43
.8
3.00
14.99
0
4200
147
0
4053
0.007
1.3
22.0
0.99
5.34
1.50
8.26
2.00
7.02
2.00
10.33
2.50
0.288
0.017
0.259
3.19
279
2448
6
10.2
82.0
3.0
15.0
1M8K
20207
-3
0.14
0.192
1
20.6
11
100.0
0.393
3.0
3.11
6.5
2012
0.418
1
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
0.9
Crystal Structure Of Methanobacterium Thermoautotrophicum Nicotinamide Mononucleotide Adenylyltransferase Mutant H19A complexed with NAD
1
N
N
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
2
N
N
3
N
N
The protein is made up of a dimer of trimers.
A
HIS
16
A
HIS
16
HELX_P
A
LEU
27
A
LEU
27
1
1
12
A
THR
51
A
THR
51
HELX_P
A
ASN
66
A
ASN
66
1
2
16
A
PRO
69
A
PRO
69
HELX_P
A
SER
71
A
SER
71
5
3
3
A
CYS
83
A
CYS
83
HELX_P
A
THR
95
A
THR
95
1
4
13
A
ASN
105
A
ASN
105
HELX_P
A
GLU
114
A
GLU
114
1
5
10
A
ARG
127
A
ARG
127
HELX_P
A
TYR
130
A
TYR
130
5
6
4
A
SER
131
A
SER
131
HELX_P
A
ASP
141
A
ASP
141
1
7
11
A
TRP
145
A
TRP
145
HELX_P
A
LEU
149
A
LEU
149
5
8
5
A
PRO
150
A
PRO
150
HELX_P
A
ILE
160
A
ILE
160
1
9
11
A
ASN
161
A
ASN
161
HELX_P
A
LEU
169
A
LEU
169
1
10
9
B
HIS
16
B
HIS
16
HELX_P
B
GLU
28
B
GLU
28
1
11
13
B
ALA
52
B
ALA
52
HELX_P
B
ASN
66
B
ASN
66
1
12
15
B
CYS
83
B
CYS
83
HELX_P
B
ALA
85
B
ALA
85
5
13
3
B
LEU
86
B
LEU
86
HELX_P
B
LEU
94
B
LEU
94
1
14
9
B
ASN
105
B
ASN
105
HELX_P
B
ASP
115
B
ASP
115
1
15
11
B
SER
131
B
SER
131
HELX_P
B
ASP
141
B
ASP
141
1
16
11
B
TRP
145
B
TRP
145
HELX_P
B
LEU
149
B
LEU
149
5
17
5
B
PRO
150
B
PRO
150
HELX_P
B
ILE
160
B
ILE
160
1
18
11
B
ASN
161
B
ASN
161
HELX_P
B
LYS
171
B
LYS
171
1
19
11
C
HIS
16
C
HIS
16
HELX_P
C
LEU
27
C
LEU
27
1
20
12
C
THR
51
C
THR
51
HELX_P
C
ASN
66
C
ASN
66
1
21
16
C
PRO
69
C
PRO
69
HELX_P
C
SER
71
C
SER
71
5
22
3
C
CYS
83
C
CYS
83
HELX_P
C
LEU
94
C
LEU
94
1
23
12
C
ASN
105
C
ASN
105
HELX_P
C
ASP
115
C
ASP
115
1
24
11
C
ARG
127
C
ARG
127
HELX_P
C
TYR
130
C
TYR
130
5
25
4
C
SER
131
C
SER
131
HELX_P
C
ASP
142
C
ASP
142
1
26
12
C
TRP
145
C
TRP
145
HELX_P
C
LEU
149
C
LEU
149
5
27
5
C
PRO
150
C
PRO
150
HELX_P
C
ILE
160
C
ILE
160
1
28
11
C
ASN
161
C
ASN
161
HELX_P
C
LYS
171
C
LYS
171
1
29
11
TRANSFERASE
nucleotidyltransferase HXGH active site motif, TRANSFERASE
A
GLN
13
A
GLN
13
1
A
PRO
14
A
PRO
14
0.02
B
GLN
13
B
GLN
13
1
B
PRO
14
B
PRO
14
-0.18
C
GLN
13
C
GLN
13
1
C
PRO
14
C
PRO
14
0.02
NADM_METTH
UNP
1
1
O26253
MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDIEC
NALWVGHIKMLTPPFDRVYSGNPLVQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDGDWRSLLPESVVEVIDEINGV
ERIKHLAKKEVSELGGIS
1
178
1M8K
4
181
O26253
A
1
4
181
1
178
1M8K
4
181
O26253
B
1
4
181
1
178
1M8K
4
181
O26253
C
1
4
181
1
cloning artifact
VAL
1
1M8K
A
O26253
UNP
1
1
cloning artifact
MET
2
1M8K
A
O26253
UNP
2
1
cloning artifact
THR
3
1M8K
A
O26253
UNP
3
1
HIS
engineered mutation
ALA
19
1M8K
A
O26253
UNP
16
19
2
cloning artifact
VAL
1
1M8K
B
O26253
UNP
1
2
cloning artifact
MET
2
1M8K
B
O26253
UNP
2
2
cloning artifact
THR
3
1M8K
B
O26253
UNP
3
2
HIS
engineered mutation
ALA
19
1M8K
B
O26253
UNP
16
19
3
cloning artifact
VAL
1
1M8K
C
O26253
UNP
1
3
cloning artifact
MET
2
1M8K
C
O26253
UNP
2
3
cloning artifact
THR
3
1M8K
C
O26253
UNP
3
3
HIS
engineered mutation
ALA
19
1M8K
C
O26253
UNP
16
19
5
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
TYR
73
A
TYR
73
A
VAL
78
A
VAL
78
A
GLU
32
A
GLU
32
A
GLY
38
A
GLY
38
A
ARG
5
A
ARG
5
A
GLY
10
A
GLY
10
A
ARG
100
A
ARG
100
A
TYR
102
A
TYR
102
A
GLU
118
A
GLU
118
A
THR
120
A
THR
120
B
TYR
73
B
TYR
73
B
PRO
77
B
PRO
77
B
GLU
32
B
GLU
32
B
ILE
37
B
ILE
37
B
ARG
5
B
ARG
5
B
GLY
10
B
GLY
10
B
ARG
100
B
ARG
100
B
TYR
102
B
TYR
102
B
GLU
118
B
GLU
118
B
THR
120
B
THR
120
C
TYR
73
C
TYR
73
C
PRO
77
C
PRO
77
C
GLU
32
C
GLU
32
C
ILE
37
C
ILE
37
C
ARG
5
C
ARG
5
C
GLY
10
C
GLY
10
C
ARG
100
C
ARG
100
C
TYR
102
C
TYR
102
C
GLU
118
C
GLU
118
C
THR
120
C
THR
120
BINDING SITE FOR RESIDUE SO4 C 1760
C
SO4
1760
Software
6
BINDING SITE FOR RESIDUE SO4 A 1759
A
SO4
1759
Software
5
BINDING SITE FOR RESIDUE SO4 B 1761
B
SO4
1761
Software
6
BINDING SITE FOR RESIDUE NAD B 2005
B
NAD
2005
Software
15
BINDING SITE FOR RESIDUE NAD A 2006
A
NAD
2006
Software
17
BINDING SITE FOR RESIDUE NAD C 2004
C
NAD
2004
Software
16
C
ARG
11
C
ARG
11
6
1_555
C
SER
131
C
SER
131
6
1_555
C
GLY
132
C
GLY
132
6
1_555
C
THR
133
C
THR
133
6
1_555
C
ARG
136
C
ARG
136
6
1_555
C
NAD
2004
I
NAD
6
1_555
A
ARG
11
A
ARG
11
5
1_555
A
GLY
132
A
GLY
132
5
1_555
A
THR
133
A
THR
133
5
1_555
A
ARG
136
A
ARG
136
5
1_555
A
NAD
2006
E
NAD
5
1_555
B
ARG
11
B
ARG
11
6
1_555
B
SER
131
B
SER
131
6
1_555
B
GLY
132
B
GLY
132
6
1_555
B
THR
133
B
THR
133
6
1_555
B
ARG
136
B
ARG
136
6
1_555
B
NAD
2005
G
NAD
6
1_555
B
VAL
9
B
VAL
9
15
1_555
B
ARG
11
B
ARG
11
15
1_555
B
GLY
38
B
GLY
38
15
1_555
B
SER
39
B
SER
39
15
1_555
B
ASP
80
B
ASP
80
15
1_555
B
ILE
81
B
ILE
81
15
1_555
B
ASN
84
B
ASN
84
15
1_555
B
TRP
87
B
TRP
87
15
1_555
B
ASN
105
B
ASN
105
15
1_555
B
LEU
107
B
LEU
107
15
1_555
B
PRO
122
B
PRO
122
15
1_555
B
LEU
124
B
LEU
124
15
1_555
B
PHE
125
B
PHE
125
15
1_555
B
TYR
126
B
TYR
126
15
1_555
B
SO4
1761
F
SO4
15
1_555
A
VAL
9
A
VAL
9
17
1_555
A
GLY
10
A
GLY
10
17
1_555
A
ARG
11
A
ARG
11
17
1_555
A
VAL
22
A
VAL
22
17
1_555
A
GLY
38
A
GLY
38
17
1_555
A
SER
39
A
SER
39
17
1_555
A
ASP
80
A
ASP
80
17
1_555
A
ILE
81
A
ILE
81
17
1_555
A
ASN
84
A
ASN
84
17
1_555
A
TRP
87
A
TRP
87
17
1_555
A
ASN
105
A
ASN
105
17
1_555
A
LEU
107
A
LEU
107
17
1_555
A
PRO
122
A
PRO
122
17
1_555
A
LEU
124
A
LEU
124
17
1_555
A
PHE
125
A
PHE
125
17
1_555
A
TYR
126
A
TYR
126
17
1_555
A
SO4
1759
D
SO4
17
1_555
C
VAL
9
C
VAL
9
16
1_555
C
GLY
10
C
GLY
10
16
1_555
C
ARG
11
C
ARG
11
16
1_555
C
VAL
22
C
VAL
22
16
1_555
C
GLY
38
C
GLY
38
16
1_555
C
SER
39
C
SER
39
16
1_555
C
ASP
80
C
ASP
80
16
1_555
C
ILE
81
C
ILE
81
16
1_555
C
ASN
84
C
ASN
84
16
1_555
C
TRP
87
C
TRP
87
16
1_555
C
ASN
105
C
ASN
105
16
1_555
C
PRO
122
C
PRO
122
16
1_555
C
LEU
124
C
LEU
124
16
1_555
C
PHE
125
C
PHE
125
16
1_555
C
TYR
126
C
TYR
126
16
1_555
C
SO4
1760
H
SO4
16
1_555
152
P 31 2 1