1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Morellet, N.
Bouaziz, S.
Lenoir, C.
Roques, B.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
327
215
227
10.1016/S0022-2836(03)00060-3
12614620
NMR Structure of the HIV-1 Regulatory Protein Vpr
2003
10.2210/pdb1m8l/pdb
pdb_00001m8l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
11411.905
VPR Protein
1
syn
polymer
no
no
MEQAPEDQGPQREPYNDWTLELLEELKNEAVRHFPRIWLHSLGQHIYETYGDTWTGVEALIRILQQLLFIHFRIGCRHSR
IGIIQQRRTRNGASKS
MEQAPEDQGPQREPYNDWTLELLEELKNEAVRHFPRIWLHSLGQHIYETYGDTWTGVEALIRILQQLLFIHFRIGCRHSR
IGIIQQRRTRNGASKS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-03-18
1
1
2008-04-28
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
RCSB
Y
RCSB
2002-07-25
REL
REL
The peptide was chemically synthesized. The sequence is naturally found in human immunodeficiency virus type 1 (HIV-1).
sample
This structure was determined using standard 2D and 3D homonuclear and heteronuclear techniques
structures with the lowest energy
100
1
2D NOESY
2D TOCSY
HSQC-NOESY
HSQC-TOCSY
3D HSQC-NOESY
3D HSQC-TOCSY
2.6
ambient
303
K
the structures are based on a total 1115 restraints
simulated annealing
1
lowest energy
1 mM Vpr 70% H2O, 30% CD3CN pH 2.6
70% H2O, 30% CD3CN
Bruker
collection
UXNMR
3.0
Bruker
data analysis
UXNMR
3.0
msi
refinement
Discover
98.0
600
Bruker
AVANCE
MET
1
n
1
MET
1
A
GLU
2
n
2
GLU
2
A
GLN
3
n
3
GLN
3
A
ALA
4
n
4
ALA
4
A
PRO
5
n
5
PRO
5
A
GLU
6
n
6
GLU
6
A
ASP
7
n
7
ASP
7
A
GLN
8
n
8
GLN
8
A
GLY
9
n
9
GLY
9
A
PRO
10
n
10
PRO
10
A
GLN
11
n
11
GLN
11
A
ARG
12
n
12
ARG
12
A
GLU
13
n
13
GLU
13
A
PRO
14
n
14
PRO
14
A
TYR
15
n
15
TYR
15
A
ASN
16
n
16
ASN
16
A
ASP
17
n
17
ASP
17
A
TRP
18
n
18
TRP
18
A
THR
19
n
19
THR
19
A
LEU
20
n
20
LEU
20
A
GLU
21
n
21
GLU
21
A
LEU
22
n
22
LEU
22
A
LEU
23
n
23
LEU
23
A
GLU
24
n
24
GLU
24
A
GLU
25
n
25
GLU
25
A
LEU
26
n
26
LEU
26
A
LYS
27
n
27
LYS
27
A
ASN
28
n
28
ASN
28
A
GLU
29
n
29
GLU
29
A
ALA
30
n
30
ALA
30
A
VAL
31
n
31
VAL
31
A
ARG
32
n
32
ARG
32
A
HIS
33
n
33
HIS
33
A
PHE
34
n
34
PHE
34
A
PRO
35
n
35
PRO
35
A
ARG
36
n
36
ARG
36
A
ILE
37
n
37
ILE
37
A
TRP
38
n
38
TRP
38
A
LEU
39
n
39
LEU
39
A
HIS
40
n
40
HIS
40
A
SER
41
n
41
SER
41
A
LEU
42
n
42
LEU
42
A
GLY
43
n
43
GLY
43
A
GLN
44
n
44
GLN
44
A
HIS
45
n
45
HIS
45
A
ILE
46
n
46
ILE
46
A
TYR
47
n
47
TYR
47
A
GLU
48
n
48
GLU
48
A
THR
49
n
49
THR
49
A
TYR
50
n
50
TYR
50
A
GLY
51
n
51
GLY
51
A
ASP
52
n
52
ASP
52
A
THR
53
n
53
THR
53
A
TRP
54
n
54
TRP
54
A
THR
55
n
55
THR
55
A
GLY
56
n
56
GLY
56
A
VAL
57
n
57
VAL
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
LEU
60
n
60
LEU
60
A
ILE
61
n
61
ILE
61
A
ARG
62
n
62
ARG
62
A
ILE
63
n
63
ILE
63
A
LEU
64
n
64
LEU
64
A
GLN
65
n
65
GLN
65
A
GLN
66
n
66
GLN
66
A
LEU
67
n
67
LEU
67
A
LEU
68
n
68
LEU
68
A
PHE
69
n
69
PHE
69
A
ILE
70
n
70
ILE
70
A
HIS
71
n
71
HIS
71
A
PHE
72
n
72
PHE
72
A
ARG
73
n
73
ARG
73
A
ILE
74
n
74
ILE
74
A
GLY
75
n
75
GLY
75
A
CYS
76
n
76
CYS
76
A
ARG
77
n
77
ARG
77
A
HIS
78
n
78
HIS
78
A
SER
79
n
79
SER
79
A
ARG
80
n
80
ARG
80
A
ILE
81
n
81
ILE
81
A
GLY
82
n
82
GLY
82
A
ILE
83
n
83
ILE
83
A
ILE
84
n
84
ILE
84
A
GLN
85
n
85
GLN
85
A
GLN
86
n
86
GLN
86
A
ARG
87
n
87
ARG
87
A
ARG
88
n
88
ARG
88
A
THR
89
n
89
THR
89
A
ARG
90
n
90
ARG
90
A
ASN
91
n
91
ASN
91
A
GLY
92
n
92
GLY
92
A
ALA
93
n
93
ALA
93
A
SER
94
n
94
SER
94
A
LYS
95
n
95
LYS
95
A
SER
96
n
96
SER
96
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
PHE
34
0.099
SIDE CHAIN
1
A
A
CD
OE2
GLU
GLU
2
2
0.111
0.011
1.252
1.363
N
1
A
A
CD
OE2
GLU
GLU
6
6
0.112
0.011
1.252
1.364
N
1
A
A
CD
OE2
GLU
GLU
13
13
0.111
0.011
1.252
1.363
N
1
A
A
CD
OE2
GLU
GLU
21
21
0.114
0.011
1.252
1.366
N
1
A
A
CD
OE2
GLU
GLU
24
24
0.112
0.011
1.252
1.364
N
1
A
A
CD
OE2
GLU
GLU
25
25
0.111
0.011
1.252
1.363
N
1
A
A
CD
OE2
GLU
GLU
29
29
0.112
0.011
1.252
1.364
N
1
A
A
CD
OE2
GLU
GLU
48
48
0.113
0.011
1.252
1.365
N
1
A
A
CD
OE2
GLU
GLU
58
58
0.112
0.011
1.252
1.364
N
1
A
GLN
8
-67.19
95.82
1
A
GLU
13
45.21
85.27
1
A
ASP
17
-167.83
-61.71
1
A
ILE
37
78.21
-22.06
1
A
ARG
77
-69.73
-71.75
1
A
THR
89
-77.67
-75.66
1
A
ALA
93
59.30
-80.74
NMR structure of the HIV-1 Regulatory Protein Vpr
1
N
N
A
ASP
17
A
ASP
17
HELX_P
A
PHE
34
A
PHE
34
1
1
18
A
ILE
37
A
ILE
37
HELX_P
A
TYR
50
A
TYR
50
1
2
14
A
THR
53
A
THR
53
HELX_P
A
HIS
78
A
HIS
78
1
3
26
VIRAL PROTEIN
Vpr, CD3CN, HIV-1, Viral protein
Q73369_9HIV1
UNP
1
1
Q73369
MEQAPEDQGPQREPYNDWTLELLEELKNEAVRHFPRIWLHSLGQHIYETYGDTWTGVEALIRILQQLLFIHFRIGCRHSR
IGIIQQRRTRNGASKS
1
96
1M8L
1
96
Q73369
A
1
1
96